Moc11g08640.1 (mRNA) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g08640.1
Type	mRNA
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Auxin-responsive family protein
Location	chr11: 6136748 .. 6137344 (+)
Sequence length	597
RNA-Seq Expression	Moc11g08640.1
Synteny	Moc11g08640.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATATATCACCAGAAAACAGAGACTTTGCACCAAATCCAACCTCTCTCTCTCTCTCTCTCTCTCTCTCTAAGAGTCTTGTTCAAGTCTTCTATATAATCTCTCAAATCTCTCTCTCTCTCTCTAAAAAGGAGAGAATTATTGAAATGAAGAAGATAAATTCTCTATTGAGGAAGTGCAAGAGCCTGTCAAGGCAACTGGGGAGGTCCTCTTCATACAGCAGCCTCAGGTCCAAATCCACAAGAGAAGATCTATGGAATATTTGTGGAACAAAAATGGAAGAAGAAGAAGAAGAAGAAGAAGATCATCAACAACAACAGCTTGAAAAGGTGAGGGGCAGTAATGTAATTATGTATGTTGGAAGCACAAGAAAAAAATATGTAATAAGTTCAAAGTTCTTGAGCCACCCTTTGGTAAATGCTCTGATTGATAAATCCAAATCCAAATCCAAATCCAAGTCTGAGGATTGTGAAGCCATTTCAGTGAGGTGTGAAGTTGTTCTGTTTGATCATCTCTTGTGGATGTTGGAAAACTCTGATCCAAACATCACTTTTGATTCTAATTTGGAGGAATTGGCTGATCTCTATGTCTTTTGA

mRNA sequence

ATGTATATATCACCAGAAAACAGAGACTTTGCACCAAATCCAACCTCTCTCTCTCTCTCTCTCTCTCTCTCTAAGAGTCTTGTTCAAGTCTTCTATATAATCTCTCAAATCTCTCTCTCTCTCTCTAAAAAGGAGAGAATTATTGAAATGAAGAAGATAAATTCTCTATTGAGGAAGTGCAAGAGCCTGTCAAGGCAACTGGGGAGGTCCTCTTCATACAGCAGCCTCAGGTCCAAATCCACAAGAGAAGATCTATGGAATATTTGTGGAACAAAAATGGAAGAAGAAGAAGAAGAAGAAGAAGATCATCAACAACAACAGCTTGAAAAGGTGAGGGGCAGTAATGTAATTATGTATGTTGGAAGCACAAGAAAAAAATATGTAATAAGTTCAAAGTTCTTGAGCCACCCTTTGGTAAATGCTCTGATTGATAAATCCAAATCCAAATCCAAATCCAAGTCTGAGGATTGTGAAGCCATTTCAGTGAGGTGTGAAGTTGTTCTGTTTGATCATCTCTTGTGGATGTTGGAAAACTCTGATCCAAACATCACTTTTGATTCTAATTTGGAGGAATTGGCTGATCTCTATGTCTTTTGA

Coding sequence (CDS)

ATGTATATATCACCAGAAAACAGAGACTTTGCACCAAATCCAACCTCTCTCTCTCTCTCTCTCTCTCTCTCTAAGAGTCTTGTTCAAGTCTTCTATATAATCTCTCAAATCTCTCTCTCTCTCTCTAAAAAGGAGAGAATTATTGAAATGAAGAAGATAAATTCTCTATTGAGGAAGTGCAAGAGCCTGTCAAGGCAACTGGGGAGGTCCTCTTCATACAGCAGCCTCAGGTCCAAATCCACAAGAGAAGATCTATGGAATATTTGTGGAACAAAAATGGAAGAAGAAGAAGAAGAAGAAGAAGATCATCAACAACAACAGCTTGAAAAGGTGAGGGGCAGTAATGTAATTATGTATGTTGGAAGCACAAGAAAAAAATATGTAATAAGTTCAAAGTTCTTGAGCCACCCTTTGGTAAATGCTCTGATTGATAAATCCAAATCCAAATCCAAATCCAAGTCTGAGGATTGTGAAGCCATTTCAGTGAGGTGTGAAGTTGTTCTGTTTGATCATCTCTTGTGGATGTTGGAAAACTCTGATCCAAACATCACTTTTGATTCTAATTTGGAGGAATTGGCTGATCTCTATGTCTTTTGA

Protein sequence

MYISPENRDFAPNPTSLSLSLSLSKSLVQVFYIISQISLSLSKKERIIEMKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWNICGTKMEEEEEEEEDHQQQQLEKVRGSNVIMYVGSTRKKYVISSKFLSHPLVNALIDKSKSKSKSKSEDCEAISVRCEVVLFDHLLWMLENSDPNITFDSNLEELADLYVF

Homology

[Close]

BLAST of Moc11g08640.1 vs. NCBI nr
Match: XP_022135446.1 (uncharacterized protein LOC111007398 [Momordica charantia])

HSP 1 Score: 285.4 bits (729), Expect = 3.7e-73
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 50  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWNICGTKMEEEEEEEEDHQQQQLE 109
           MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWNICGTKMEEEEEEEEDHQQQQLE
Sbjct: 1   MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWNICGTKMEEEEEEEEDHQQQQLE 60

Query: 110 KVRGSNVIMYVGSTRKKYVISSKFLSHPLVNALIDKSKSKSKSKSEDCEAISVRCEVVLF 169
           KVRGSNVIMYVGSTRKKYVISSKFLSHPLVNALIDKSKSKSKSKSEDCEAISVRCEVVLF
Sbjct: 61  KVRGSNVIMYVGSTRKKYVISSKFLSHPLVNALIDKSKSKSKSKSEDCEAISVRCEVVLF 120

Query: 170 DHLLWMLENSDPNITFDSNLEELADLYVF 199
           DHLLWMLENSDPNITFDSNLEELADLYVF
Sbjct: 121 DHLLWMLENSDPNITFDSNLEELADLYVF 149

[Close]

BLAST of Moc11g08640.1 vs. NCBI nr
Match: XP_038899559.1 (auxin-responsive protein SAUR78 [Benincasa hispida])

HSP 1 Score: 219.5 bits (558), Expect = 2.5e-53
Identity = 121/152 (79.61%), Postives = 135/152 (88.82%), Query Frame = 0


Query: 50  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWNICGTKMEEEEEEEEDHQQQQLE 109
           MKKIN LLRKCKSLSRQLGRSSSYSSLRSKSTREDLW +CGTKMEEE+ E+   Q+QQLE
Sbjct: 1   MKKINYLLRKCKSLSRQLGRSSSYSSLRSKSTREDLW-VCGTKMEEEDFEQ---QKQQLE 60

Query: 110 KVRGSNVIMYVGSTRKKYVISSKFLSHPLVNALIDKSKSKSKSKSEDCE---AISVRCEV 169
           KV G++VI+YVGSTRK+Y ISSK+LSHPL+NALIDKSKSK    ++D E    ISVRCEV
Sbjct: 61  KVSGNDVILYVGSTRKRYAISSKYLSHPLLNALIDKSKSKKLLANDDDEEEDCISVRCEV 120

Query: 170 VLFDHLLWMLENSDPNITFDSNLEELADLYVF 199
           VLFDHLLWMLENSDPNI+FDSNLEELA+LYVF
Sbjct: 121 VLFDHLLWMLENSDPNISFDSNLEELAELYVF 148

[Close]

BLAST of Moc11g08640.1 vs. NCBI nr
Match: XP_023536060.1 (auxin-responsive protein SAUR71 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 211.5 bits (537), Expect = 6.8e-51
Identity = 116/153 (75.82%), Postives = 130/153 (84.97%), Query Frame = 0


Query: 50  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWNICGTKMEEEEEEEEDHQQQQ-- 109
           M K+NSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLW +C   MEE EE EE  ++++  
Sbjct: 1   MMKMNSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLW-VCDRTMEEHEEREEHEEREEHE 60

Query: 110 -LEKVRGSNVIMYVGSTRKKYVISSKFLSHPLVNALIDKSK-SKSKSKSEDCEAISVRCE 169
             EKV GSNVI+YVGSTRK+Y ISSK+LSHPL+NALIDKSK  K  ++ +D E ISVRCE
Sbjct: 61  GFEKVSGSNVIIYVGSTRKRYAISSKYLSHPLLNALIDKSKPPKGNNEDDDDECISVRCE 120

Query: 170 VVLFDHLLWMLENSDPNITFDSNLEELADLYVF 199
           VVLFDHLLWMLENSDPNI FDSNLEELA+LYVF
Sbjct: 121 VVLFDHLLWMLENSDPNICFDSNLEELAELYVF 152

[Close]

BLAST of Moc11g08640.1 vs. NCBI nr
Match: XP_011653970.1 (auxin-responsive protein SAUR78 [Cucumis sativus] >KAE8649782.1 hypothetical protein Csa_012026 [Cucumis sativus])

HSP 1 Score: 208.0 bits (528), Expect = 7.5e-50
Identity = 117/158 (74.05%), Postives = 128/158 (81.01%), Query Frame = 0


Query: 50  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWNICGTKMEEEEEEEEDHQQQQLE 109
           MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLW +C       E++EED +QQ  +
Sbjct: 1   MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLW-VC-------EKQEEDFEQQIEQ 60

Query: 110 KVRGSNVIMYVGSTRKKYVISSKFLSHPLVNALIDKSKSK---------SKSKSEDCEAI 169
           KV GSNVI+YVGSTRKKY I+SK+LSHPL+NALIDKSKSK              +D E I
Sbjct: 61  KVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDDGHEDDEECI 120

Query: 170 SVRCEVVLFDHLLWMLENSDPNITFDSNLEELADLYVF 199
            VRCEVVLFDHLLWMLENSDPNITFDSNLEELA+LYVF
Sbjct: 121 LVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF 150

[Close]

BLAST of Moc11g08640.1 vs. NCBI nr
Match: KAG7024703.1 (hypothetical protein SDJN02_13521, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 203.8 bits (517), Expect = 1.4e-48
Identity = 114/157 (72.61%), Postives = 131/157 (83.44%), Query Frame = 0


Query: 50  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWNICGTKMEEEEEEEE-----DHQ 109
           M K+NSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLW +C   MEE EE EE     +H+
Sbjct: 1   MMKMNSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLW-VCERTMEEHEEHEEREEHGEHE 60

Query: 110 QQQ-LEKVRGSNVIMYVGSTRKKYVISSKFLSHPLVNALIDKSK--SKSKSKSEDCEAIS 169
           +++  E+V GSNVI+YVGSTRK+Y ISSK+LSHPL+NALIDKSK    ++   +D + IS
Sbjct: 61  EREGFEEVSGSNVIIYVGSTRKRYTISSKYLSHPLLNALIDKSKPPKGNEDDDDDHKCIS 120

Query: 170 VRCEVVLFDHLLWMLENSDPNITFDSNLEELADLYVF 199
           VRCEVVLFDHLLWMLENSDPNI FDSNLEELA+LYVF
Sbjct: 121 VRCEVVLFDHLLWMLENSDPNICFDSNLEELAELYVF 156

[Close]

BLAST of Moc11g08640.1 vs. ExPASy Swiss-Prot
Match: Q9LQI6 (Auxin-responsive protein SAUR77 OS=Arabidopsis thaliana OX=3702 GN=SAUR77 PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.9e-12
Identity = 37/87 (42.53%), Postives = 57/87 (65.52%), Query Frame = 0


Query: 117 IMYVGSTRKKYVISSKFLSHPLVNALIDKSKSKSKSKSEDCEAISVRCEVVLFDHLLWML 176
           ++YVG +R+ Y++SS  ++HPL   L+D+S S+   +  D E + V CEVVLF+HLLWML
Sbjct: 46  VVYVGKSRRPYMLSSHVIAHPLFQELLDRS-SRFIEERHDQETVLVACEVVLFEHLLWML 105

Query: 177 ENS-----DPNITFDSNLEELADLYVF 199
           +NS     D +     ++EELA+ Y +
Sbjct: 106 KNSSSDHGDEDDRERGSVEELAEFYTY 131

[Close]

BLAST of Moc11g08640.1 vs. ExPASy Swiss-Prot
Match: Q9C9E1 (Auxin-responsive protein SAUR78 OS=Arabidopsis thaliana OX=3702 GN=SAUR78 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 3.2e-11
Identity = 34/82 (41.46%), Postives = 52/82 (63.41%), Query Frame = 0


Query: 117 IMYVGSTRKKYVISSKFLSHPLVNALIDKSKSKSKSKSEDCEAISVRCEVVLFDHLLWML 176
           ++YVG TR+ Y++    +SHPL   L+D+S S+S  +  +   I V CEVVLF+HLLWML
Sbjct: 45  VVYVGQTRRPYMLRPDIISHPLFQELVDRSSSRSIEQDRE---IVVACEVVLFEHLLWML 104

Query: 177 ENSDPNITFDSNLEELADLYVF 199
           ++         ++EELA+ Y +
Sbjct: 105 KSGQEG----GSVEELAEFYTY 119

[Close]

BLAST of Moc11g08640.1 vs. ExPASy Swiss-Prot
Match: Q29PU2 (Auxin-responsive protein SAUR76 OS=Arabidopsis thaliana OX=3702 GN=SAUR76 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 7.9e-10
Identity = 37/79 (46.84%), Postives = 50/79 (63.29%), Query Frame = 0


Query: 118 MYVGSTRKKYVISSKFLSHPLVNALIDKSKSKSKSKSEDCEAISVRCEVVLFDHLLWMLE 177
           +YVG TR+ Y +SS  +SHPL   L   +       SED  +ISV CEVVLF+HLLWMLE
Sbjct: 51  VYVGRTRRTYHVSSDVVSHPLFQQL---AAVDGGCGSED-GSISVSCEVVLFEHLLWMLE 110

Query: 178 NSDPNITFDSNLEELADLY 197
           N+D + +   ++ EL + Y
Sbjct: 111 NADADESRPESVYELVEFY 125

[Close]

BLAST of Moc11g08640.1 vs. ExPASy TrEMBL
Match: A0A6J1C0S4 (uncharacterized protein LOC111007398 OS=Momordica charantia OX=3673 GN=LOC111007398 PE=3 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.8e-73
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 50  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWNICGTKMEEEEEEEEDHQQQQLE 109
           MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWNICGTKMEEEEEEEEDHQQQQLE
Sbjct: 1   MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWNICGTKMEEEEEEEEDHQQQQLE 60

Query: 110 KVRGSNVIMYVGSTRKKYVISSKFLSHPLVNALIDKSKSKSKSKSEDCEAISVRCEVVLF 169
           KVRGSNVIMYVGSTRKKYVISSKFLSHPLVNALIDKSKSKSKSKSEDCEAISVRCEVVLF
Sbjct: 61  KVRGSNVIMYVGSTRKKYVISSKFLSHPLVNALIDKSKSKSKSKSEDCEAISVRCEVVLF 120

Query: 170 DHLLWMLENSDPNITFDSNLEELADLYVF 199
           DHLLWMLENSDPNITFDSNLEELADLYVF
Sbjct: 121 DHLLWMLENSDPNITFDSNLEELADLYVF 149

[Close]

BLAST of Moc11g08640.1 vs. ExPASy TrEMBL
Match: A0A1S3B9J9 (uncharacterized protein LOC103487659 OS=Cucumis melo OX=3656 GN=LOC103487659 PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 3.8e-47
Identity = 113/161 (70.19%), Postives = 127/161 (78.88%), Query Frame = 0


Query: 50  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWNICGTKMEEEEEEEEDHQQQQLE 109
           MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLW +C       E++EED +QQ  +
Sbjct: 1   MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLW-VC-------EKQEEDFEQQFDQ 60

Query: 110 KVRG-SNVIMYVGSTRKKYVISSKFLSHPLVNALIDKSKSK-----------SKSKSEDC 169
           KV G +NV++YVGSTRKKY I+SK+L HPL+NALIDKSKSK                +D 
Sbjct: 61  KVSGNNNVVLYVGSTRKKYAINSKYLGHPLLNALIDKSKSKKLVDDHDDEHEEHDDGDDE 120

Query: 170 EAISVRCEVVLFDHLLWMLENSDPNITFDSNLEELADLYVF 199
           + I VRCEVVLFDHLLWMLENSDPNITFDSNLEELA+LYVF
Sbjct: 121 DCILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF 153

[Close]

BLAST of Moc11g08640.1 vs. ExPASy TrEMBL
Match: B9RI47 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1576420 PE=3 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 1.6e-37
Identity = 96/149 (64.43%), Postives = 113/149 (75.84%), Query Frame = 0


Query: 50  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWNICGTKMEEEEEEEEDHQQQQLE 109
           MKKIN +LRKCKSLSRQLGRSSSYSSLRSKSTRE+LW        + +EE+E+HQ     
Sbjct: 1   MKKINLILRKCKSLSRQLGRSSSYSSLRSKSTREELWG-------DHKEEDEEHQS---- 60

Query: 110 KVRGSNVIMYVGSTRKKYVISSKFLSHPLVNALIDKSKSKSKSKSEDCEAISVRCEVVLF 169
                   ++VGSTRK+YVISSK+LSHPLVNALI KSK +        E + V+CEVVLF
Sbjct: 61  -------TLFVGSTRKRYVISSKYLSHPLVNALIQKSKQRQGE-----EILVVKCEVVLF 120

Query: 170 DHLLWMLENSDPNITFDSNLEELADLYVF 199
           DHLLWMLEN+DPN++FDS LEELA+LYVF
Sbjct: 121 DHLLWMLENADPNLSFDS-LEELAELYVF 125

[Close]

BLAST of Moc11g08640.1 vs. ExPASy TrEMBL
Match: A0A3N7FTM7 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_011G143400 PE=3 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 5.1e-36
Identity = 101/176 (57.39%), Postives = 122/176 (69.32%), Query Frame = 0


Query: 23  LSKSLVQVFYIISQISLSLSKKERIIEMKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTR 82
           L+  LV +F ++SQ             MKKIN +LRKCKSLSRQLGRSSSYSSLRSKSTR
Sbjct: 10  LTSKLVLLFLLVSQNI-----------MKKINLILRKCKSLSRQLGRSSSYSSLRSKSTR 69

Query: 83  EDLWNICGTKMEEEEEEEEDHQQQQLEKVRGSNVIMYVGSTRKKYVISSKFLSHPLVNAL 142
           EDLW        + ++E E+H+             ++VGSTRK+YVISSK+LSHPLVNAL
Sbjct: 70  EDLWG-------DHKQENENHE------------TIFVGSTRKRYVISSKYLSHPLVNAL 129

Query: 143 IDKSKSKSKSKSEDCEAISVRCEVVLFDHLLWMLENSDPNITFDSNLEELADLYVF 199
           I+KS+ K     ED   + V+CEVV FDHLLWMLEN+DPN +FDS LEELADLY+F
Sbjct: 130 IEKSRQK---PGED-NILVVKCEVVFFDHLLWMLENADPNASFDS-LEELADLYMF 150

[Close]

BLAST of Moc11g08640.1 vs. ExPASy TrEMBL
Match: A0A4U5MZE8 (Auxin-responsive family protein OS=Populus alba OX=43335 GN=D5086_0000283110 PE=3 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 5.1e-36
Identity = 95/149 (63.76%), Postives = 112/149 (75.17%), Query Frame = 0


Query: 50  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWNICGTKMEEEEEEEEDHQQQQLE 109
           MKKIN +LRKCKSLSRQLGRSSSYSSLRSKSTREDLW        + ++E+E+H+     
Sbjct: 1   MKKINLILRKCKSLSRQLGRSSSYSSLRSKSTREDLWG-------DHKQEDENHE----- 60

Query: 110 KVRGSNVIMYVGSTRKKYVISSKFLSHPLVNALIDKSKSKSKSKSEDCEAISVRCEVVLF 169
                   + VGSTRK+YVISSK+LSHPLVNALI+KS+ K     ED   + V+CEVV F
Sbjct: 61  -------TILVGSTRKRYVISSKYLSHPLVNALIEKSRQK---PGED-NVLVVKCEVVFF 120

Query: 170 DHLLWMLENSDPNITFDSNLEELADLYVF 199
           DHLLWMLEN+DPN +FDS LEELADLY+F
Sbjct: 121 DHLLWMLENADPNASFDS-LEELADLYMF 125

[Close]

BLAST of Moc11g08640.1 vs. TAIR 10
Match: AT3G12955.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 98.2 bits (243), Expect = 7.8e-21
Identity = 65/153 (42.48%), Postives = 91/153 (59.48%), Query Frame = 0


Query: 47  IIEMKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWNICGTKMEEEEEEEEDHQQQ 106
           +I+  ++  +LR+CKS+S QLGRS SY+SLRSKS R D                +DH Q 
Sbjct: 1   MIKKMRLMMMLRRCKSVSTQLGRSYSYTSLRSKSARRD---------------PQDHLQD 60

Query: 107 QLEKVRGSNV-IMYVGSTRKKYVISSKFLSHPLVNALIDKSKSKSKSKSEDCEA-ISVRC 166
             +    S    + VG T+K Y+IS K L HPL+NAL++K +   +  +ED    I+V+C
Sbjct: 61  VDQSPTPSMYQTVLVGRTKKPYLISKKHLKHPLLNALVEKQQRYEEDDNEDGSCIITVKC 120

Query: 167 EVVLFDHLLWMLENSDPNITFDSNLEELADLYV 198
           EVVLFDHLLWMLE  D  +    +L++ A LY+
Sbjct: 121 EVVLFDHLLWMLEYGD-EVHILESLDDFAHLYL 137

[Close]

BLAST of Moc11g08640.1 vs. TAIR 10
Match: AT1G17345.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 72.8 bits (177), Expect = 3.5e-13
Identity = 37/87 (42.53%), Postives = 57/87 (65.52%), Query Frame = 0


Query: 117 IMYVGSTRKKYVISSKFLSHPLVNALIDKSKSKSKSKSEDCEAISVRCEVVLFDHLLWML 176
           ++YVG +R+ Y++SS  ++HPL   L+D+S S+   +  D E + V CEVVLF+HLLWML
Sbjct: 46  VVYVGKSRRPYMLSSHVIAHPLFQELLDRS-SRFIEERHDQETVLVACEVVLFEHLLWML 105

Query: 177 ENS-----DPNITFDSNLEELADLYVF 199
           +NS     D +     ++EELA+ Y +
Sbjct: 106 KNSSSDHGDEDDRERGSVEELAEFYTY 131

[Close]

BLAST of Moc11g08640.1 vs. TAIR 10
Match: AT1G72430.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 70.1 bits (170), Expect = 2.3e-12
Identity = 34/82 (41.46%), Postives = 52/82 (63.41%), Query Frame = 0


Query: 117 IMYVGSTRKKYVISSKFLSHPLVNALIDKSKSKSKSKSEDCEAISVRCEVVLFDHLLWML 176
           ++YVG TR+ Y++    +SHPL   L+D+S S+S  +  +   I V CEVVLF+HLLWML
Sbjct: 45  VVYVGQTRRPYMLRPDIISHPLFQELVDRSSSRSIEQDRE---IVVACEVVLFEHLLWML 104

Query: 177 ENSDPNITFDSNLEELADLYVF 199
           ++         ++EELA+ Y +
Sbjct: 105 KSGQEG----GSVEELAEFYTY 119

[Close]

BLAST of Moc11g08640.1 vs. TAIR 10
Match: AT5G20820.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 65.5 bits (158), Expect = 5.6e-11
Identity = 37/79 (46.84%), Postives = 50/79 (63.29%), Query Frame = 0


Query: 118 MYVGSTRKKYVISSKFLSHPLVNALIDKSKSKSKSKSEDCEAISVRCEVVLFDHLLWMLE 177
           +YVG TR+ Y +SS  +SHPL   L   +       SED  +ISV CEVVLF+HLLWMLE
Sbjct: 51  VYVGRTRRTYHVSSDVVSHPLFQQL---AAVDGGCGSED-GSISVSCEVVLFEHLLWMLE 110

Query: 178 NSDPNITFDSNLEELADLY 197
           N+D + +   ++ EL + Y
Sbjct: 111 NADADESRPESVYELVEFY 125

[Close]

BLAST of Moc11g08640.1 vs. TAIR 10
Match: AT5G20810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 42.0 bits (97), Expect = 6.6e-04
Identity = 25/93 (26.88%), Postives = 50/93 (53.76%), Query Frame = 0


Query: 96  EEEEEEDHQQQQLEKVRGSNVIMYVGSTRKKYVISSKFLSHPLVNALIDKSKSKSKSKSE 155
           + +EE     +    V   N+ +YVG   ++++I + +LSH L   L++  K++ +   +
Sbjct: 64  DSDEETCQSPEPPHDVPKGNLAVYVGPELRRFIIPTSYLSHSLFKVLLE--KAEEEFGFD 123

Query: 156 DCEAISVRCEVVLFDHLLWMLENSDPNITFDSN 189
              A+++ CEV  F +LL  +EN+  ++  D N
Sbjct: 124 QSGALTIPCEVETFKYLLKCMENNLKDLHPDDN 154

The following BLAST results are available for this feature:

BLAST of Moc11g08640.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135446.1	3.7e-73	100.00	uncharacterized protein LOC111007398 [Momordica charantia]	[more]
XP_038899559.1	2.5e-53	79.61	auxin-responsive protein SAUR78 [Benincasa hispida]	[more]
XP_023536060.1	6.8e-51	75.82	auxin-responsive protein SAUR71 [Cucurbita pepo subsp. pepo]	[more]
XP_011653970.1	7.5e-50	74.05	auxin-responsive protein SAUR78 [Cucumis sativus] >KAE8649782.1 hypothetical pro...	[more]
KAG7024703.1	1.4e-48	72.61	hypothetical protein SDJN02_13521, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Moc11g08640.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQI6	4.9e-12	42.53	Auxin-responsive protein SAUR77 OS=Arabidopsis thaliana OX=3702 GN=SAUR77 PE=1 S...	[more]
Q9C9E1	3.2e-11	41.46	Auxin-responsive protein SAUR78 OS=Arabidopsis thaliana OX=3702 GN=SAUR78 PE=1 S...	[more]
Q29PU2	7.9e-10	46.84	Auxin-responsive protein SAUR76 OS=Arabidopsis thaliana OX=3702 GN=SAUR76 PE=1 S...	[more]

BLAST of Moc11g08640.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C0S4	1.8e-73	100.00	uncharacterized protein LOC111007398 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A1S3B9J9	3.8e-47	70.19	uncharacterized protein LOC103487659 OS=Cucumis melo OX=3656 GN=LOC103487659 PE=...	[more]
B9RI47	1.6e-37	64.43	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1576420 PE=3 SV=1	[more]
A0A3N7FTM7	5.1e-36	57.39	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_011G143400 PE=3 ...	[more]
A0A4U5MZE8	5.1e-36	63.76	Auxin-responsive family protein OS=Populus alba OX=43335 GN=D5086_0000283110 PE=...	[more]

BLAST of Moc11g08640.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12955.1	7.8e-21	42.48	SAUR-like auxin-responsive protein family	[more]
AT1G17345.1	3.5e-13	42.53	SAUR-like auxin-responsive protein family	[more]
AT1G72430.1	2.3e-12	41.46	SAUR-like auxin-responsive protein family	[more]
AT5G20820.1	5.6e-11	46.84	SAUR-like auxin-responsive protein family	[more]
AT5G20810.1	6.6e-04	26.88	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 82..176 e-value: 1.2E-13 score: 51.0
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 52..198
None	No IPR available	PANTHER	PTHR31374:SF195	EXPRESSED PROTEIN	coord: 52..198

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Moc11g08640	Moc11g08640	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Moc11g08640.1.exon1	Moc11g08640.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Moc11g08640.1	cds.Moc11g08640.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Moc11g08640.1	Moc11g08640.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin