Moc10g28380.1 (mRNA) Bitter gourd (OHB3-1) v2

Overview
NameMoc10g28380.1
TypemRNA
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr10: 21264453 .. 21270225 (-)
Sequence length1374
RNA-Seq ExpressionMoc10g28380.1
SyntenyMoc10g28380.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACCTTAAAGAGTCATTGGGGCCTTGTTGGGACTTTGCCTACAAATAGAACCATTCCGCTTCATTTTGATGTACGCGACCAAACCAATTCTCTCTCGAGTTGACTTGAACGTTTATTGACTTTAACATCGGAGTATCTACTTTGTTTTGCAGATCCTCTGCTCGGCATTCGGAGCTCAGTCTAGCTCGTCCTAGCCGATCCGGAGCTTGGAGACTTGGTCATTTCTTGATCAAACACACTCCAGCACAATAATTTAACGTATTTGTTTGAGTTAATAGTGTAAATAAATATAAAGTTAGAATATTGGTGTTATAAGATAGATCTCTCTTCACAAAATTTCTTTTCCAAATTCAAATGAAAGCAACATGCACAATAAAAAGACTAAATAGACAATTTGAAACCATAGTGTTTGACAAAATTCCAATACTCATATTTGAAAATGATGGAAACTTTTGAAATTGCAATATTTTGAGGGTGGGGAGACAGAGATATCAAGATACATGATCCTTGTGGGTCTTAAAATCATGTAATTTTGGGGACATATGATCCTACCAATTGAGAAATTATTCAATTTTTCTGTTTCAATTTTTGATTTGTAAAATGATTTTTGCATCCTTTTTATTTTAATTTATTTTTCTAAAAGACGTATTTCGTTTTTGCGTGTATATATATTTTTTCTCTAAGAAATATACGTTTTGTAATCATTTTTTATTCGGGGTGTTATTATCATTTTCTCCGAACTTTTCACTTAAAACCGTGGTTCTAAATATCCGTCGACATGTCGACATTTCCATCGATATATCCATATTTTCATGGGTTCGACATTGATATGAAGGGTAAATCGACATTTTCTATTGTACTACAATAAAATCGATAAATATGAAAAATATCAACAAAATGTCACTAATATATACATAATATTAATATTAATTATTTTTAACTAATTTAGAAATAGGAAAATGTTTATTTTATAAATTTAAATATTTTTTATGACTTTTTAATTTTTCTAACTTTTACGAAAATATACATCGACATCGACATTTTATCGATATTTCTATGAAATTGAGACCTCAACATTTCTATCGACATCGACATTTAAAACCTTGCTTAAAACTAACATGAACTTAACTGGTTAAGTCATGTATCTCCAACCAAAAGATCATATGTTCGAACTCTCACCTCCGCACTTAAAAAAAGTTACCAAATGAATGTTTGAATTAAAAAAAAAATCATTTTTCATGTATCTAGTCTCTGTCGTGTTTTTATTTAGTTAATTGTCTAAAAAATGTGGTACTCAACTAACATTTCGTAATATCATTTCTTATTTTGTGTATTATAATCATTTTCTCTTGACTTTTTTACTTGAGAATCTTCACTTTAAACAAATAAATTTTTGAAATCAAGTTGTTTCTTTTTTTCTCTAAGAAATGTAATACTTCGTTAGCATTTTGTGATCATTAATTATTTTATGTAGTAGAATATTCTCAGTTTGTTAATTATCTTTTTAATTATTTTTTTACTCTCCACTCCTTATTTTGACCGCCACTCATTAATGTCACATAACATAGGGCAATCACCATCTTAAATACCACATCGTTTTTCTATTAGTCAAACTAACAGTTAAAAATGTCCGAAGACTATTTTGAATCATTATCTTAGAGACCAAAAAGTGTATTTTACCCAAAAATAAACTATAGAAAATTATTACACACCTTTCGATTTTTGAATGATTTAATGTAATTTACTTGTAAATTGTTTAAAATATGAAATTAATTGCTATATAAAGTTGGAAATAAGTAACAACAAATTAAGGGTGTTTTTTTCTTTCAAATTGTTCTGAAACTTTTTTTTCTTTTTTTTTTATTTAAAAGTTGTTGGGAAAGTGATTTTCTTCTCTCTCTTTTTGAAAAGGTTGGGAAAGTGCTATTGATTTTTATATATTAATTTAAAAATATAACTAATTTAAAACAGGTTATGCTTAAAAATATTTTATAATCATAAGTGGATAATAATGGAAAAATACTTTGCTCAAAAAAAAAAATAATGGAAAAATACGTGTAAAGAAGAATATAATGTCGCTCTTTATTTTGAGTTTATAAGTTGAATCTTAAAACTCCCATATTTGTGTAATAAATCCTTAAATTTTAAAAAGTTTCTGTCAGAAAGGTAAAGTTTGTCTAATAAATCCTTAAATTTTAAAAAGTTTCTCTAAATTTGTAATTTTGTATCAATGGCCCTAAACCTATTAGATTTTTAAAAAGTTTACCAACCTATTAGATACATAATTAAAAGATAAAAATTCATTAGATAACTATTTATAGTTTAAATACTATTTTGGTATTGTATTTTTTACTTTGGTTCATTTTGGTCATTCACTCTCAAAATGTGTACTCTGGTCGTTGTATATTTAACTTTTGTCTATTTTAGTTCTCATCATTTCAAAACGTCTATTTTAGTATTGTAGCTTTAAAAAGTGACCCATTTTCATTTTTATTTCATTTCTTCAAATCACAATTTTAGCATGACATTTCCCTCGAAAAGTTTCTTGAAACGAAACCATAAATTTGTATTAAGGAGTTTTTATTATTCATAAAATATGTGATAAAAGCAGAAACTATATTAATCAATTTTTAAAAGTAGAATGACTAAAATTGATCAAAATTGAAATTACTTATCAAAATTAATCAAACCTAAACATAGAAATAATATTTAAACCCTTTACGGGTGTAGTATCACGAAACAAATAGATCATATCCGTTAATTACAATTATTTATTTTGAAAATGTTGGTTTTTGAAAAGTCTTGAATTGCTTTATTGGCCACATATTAGATACGTAGCCTAATCAAATTTGACTTCTTACTTCTATCTTTAGTTAATTATTAAATATATATATATATATATATTTAATAAAAAGGTTCATTATTTAATCACTTTGTTTATATATCAAGTTATGGTTTTTTTTCTTTTTTCTTTTTTTTTTGGGTAAGGAAACCAAGTTTAAATACTAGTTTCATCTCGTAGTTTTTTGCTTTAGTTTATTTTGCTACTTAGATTTTCAATTTTTTGTTCATTTTAGTTTGTGTACTTTCAAAACATCTATTTTGGTCTATTTGCTTCTTAAAAAAGACCAATTTAATCTATATTTACAAAATTTAAACAAATTTTTTTTATTCAACAACGCGTTTATTAGAGATTCTAATTATTAAGCGTGTTTCGTCATAAACAATTCTAGGTTGGATGATCTCATGAATATTTTTTAAAGGTGTCCCTTTGCCTCATATCAAAAATTTTAATTAACTTCCTTTATTTATTAAATTATTAGAAAATTAAAATACATTTCATAATAAGTTTGTTAAGCTGTAAATAATAAAAATACCAAATTTTGAGTGGAAATATGTGTAATGTTAGGGGCGTGAAAAGTGGATTGGAGCTAGAGTTCCTCGTAAGGCTGGCCATGGTCCAGCTTAGATCATGGCGCCGCACAGTTGAAAAACGTACAACCATGACATTTGGTATCAGAGCCTAAAGTTGGCTCCGTGAGTAAAGACCAGGCCCAAGTCGACTTAGTTCAGACCCATCCTTTATGCGTTTAGTCGGATAGTTTGACAAAGCCAAGTTCAGATTGAAGACTCCGCAAGTGTGTCAAGAGTGCCAGTTTGGCAGGACAGTTGCGTCAGTCAGTATCAGAGGCAGAAAGTAAGAGTTGAAGCCGGACTTCTTGAGACTCAAACGATGTCGTCAATAGGCATTCGATTGGGGGAAGTCCATCCCGTTAGAAAGCAAGACCCAAGTCCTTTGCCTAAGGCTTGGCGGTTTCGTTGTGAGCGGAAGCGATCAAGAAGGCAGCGTTTAATGATGCTTTCAAAAGTCGTGGAGCCACCTTGAAGCCAAGGGCGGAATAAGCCGCAAGAAGAAAGAAACGCACGTCAGTGGTCACAAAGTAGGCCTAGACTGAGTGCGCAAGAGCAAGCATGAAAGAAACCGAAGACGAACCAGGTAGGGTGTCTTCGAAAGAGCCATTACCATCAGAGGGATAGTGTCAATGGCTGCAAGCAGACAAGCCGGGGGTCAGGGCGACATGCACCGGTCAAGTACAAGAGAAGCATCAAGTAAGTCCACAGTTGGTGGACAGTGTGGCTAAAGCAAAGAGCCAGTTCAGGAAAGGGAAGTGGCCCGAGACAATGGGTCGCTTGCCCCAAGTTGTGCTTAAGAAGTGAGCACGCGTGTCCCTTAAGTTGAAACACTCTTTAGTACGGGCTTGCTGGTGCGCCCGAGAGAATGGGCCAGGTTGCATGACGAGTTTAGAGTGAACGACTTCGCAGAAAAGTTCAAGAGGCCAGTAGTTGCTCAAGAAGGAGCGTTAGTCTGGTGCGATTATGTTCGTGGGAAGCTGCAGGCAGAGAAGAGTCGTGCAGTGTATTTGCCACACGAAGGTGGCATAAAGGCAGCCGTTGGAGTTGTCCGTTTGTCGCAAGACGCGGCATGAGAACGTTACCCTAGAGGGTGGCGTAATAGAAGCCTTGTGCAGTTTGCTTACTTACCACAGCAAGTGGTCTGAGAAAAGGCTTGTTGCAGTTGCGCGTGCCACGACAGGTGGCCTGTTGAAGACGTTGGCTGAAGGGTAGGGCCAACTTGAAGTGAGCCTCAGAGTAAAGTGTTAGCTGCCTCAGTAAAGTGTCAGTTGTTCAGAGAACTTGAGAGTTGAAGCCAAGTGGGCTTGAAGCAAGGGCCAAAGTGTGCCCAAAGTTTAGTACTGTGTTTCTGAATCATGTCTTGGGCCAAGTCCGAAAGCAAGGCGCGAGAAGGTCCGCGAAAGGAGACTGTTTTAGGAGCATTGTGCCAAGTTGATGTTCTGCTGCAACGCTGAGAAAGAGCCGAGTCAGTTAGCTAGTCTGAAGAAGACGTCATCGAGAGCGATGACGAGTTTAAGTGGGGGAGAGTGTTACAATCCTAACTCTTATCTTTGGATTGTACCCCACGAGTAGGTCATCGAGGACGATGACAGTTTAAGTGGGGGAGAATGTCACAACCATACTAGTGGAGAGTAGGTTGTGACGCCCACGTAGTGTGCAAGTGTCAGTGACAAGCATATGTCGCCCATCGGGCCATGTCAAGGGCCGAGAGTGAAGTGTCGTGATGCGACCAAGGAGGATGGTGCATCACCTATCACACCATATGGATGTGCTCAAGAATGCCTAGAGAAGGCATAGGCAGAATGCAAAGCGAAGGCGACGTCAGTGGTGTCGGTGACAAGCTCAACGGGGGCCAGTTGGGGCTCCGGGCCATGACCCTAGAAGTCGGGGTTCCGTCGAGATTTTGGACGAGCGGCTTTAGAGTTAGATGCATATTAGTGAGATATGTAAGTACGCCAAGTTTCGTGTCAATCGGAGTTCAGACGTGCGCTCTACGTTGGCGAGTGACTCCTCGCCACTTTCGACGTTCATGTCTGCCAAGTCAAGTTTGCCTTAGAATGTACCTTAGGGGGGAGGCATGGTGTTGGCTCTCCACCACCCCTGGGCCATGTCAGGGCCTAGGTGAGCCACCCCATGGCACATGCGTGTGTCATGGCGAGGGCGAGCGTCTACAAGACGAGTGTCTTGGGCGACTTCCGTCGAGGATAGAAAACTCGAGGACAGTGTCGGGCGGCACGGGTGTGCGGGCATTGCGCCTCGGTCCATGTGTCGGAGGTTGCACCACGGGGGTCCCTATGGGGTACGGTATGCTCAAACGACACGGCACGAGCGCAAGAGTCGTCGTGCCACGATAG

mRNA sequence

ATGGCAACCTTAAAGAGTCATTGGGGCCTTGTTGGGACTTTGCCTACAAATAGAACCATTCCGCTTCATTTTGATATCCTCTGCTCGGCATTCGGAGCTCAGTCTAGCTCGGGCGTGAAAAGTGGATTGGAGCTAGAGTTCCTCGTAAGGCTGGCCATGGTCCAGCTTAGATCATGGCGCCGCACAATTGAAGACTCCGCAAGTGTGTCAAGAGTGCCAGTTTGGCAGGACAGTTGCGTCAGTCAGTATCAGAGGCAGAAAGTAAGAGTTGAAGCCGGACTTCTTGAGACTCAAACGATGTCGTCAATAGGCATTCGATTGGGGGAAGTCCATCCCGTTAGAAAGCAAGACCCAAGTCCTTTGCCTAAGGCTTGGCGGTTTCGTTACAAGCCGGGGGTCAGGGCGACATGCACCGGTCAAGTACAAGAGAAGCATCAAGTAAGTCCACAGTTGGTGGACAGTGTGGCTAAAGCAAAGAGCCAGTTCAGGAAAGGGAAGTGGCCCGAGACAATGGGTCGCTTGCCCCAAGTTGTGCTTAAGAAGTTGCATGACGAGTTTAGAGTGAACGACTTCGCAGAAAAGTTCAAGAGGCCAGTAGTTGCTCAAGAAGGAGCGTTAGTCTGGTGCGATTATGTTCGTGGGAAGCTGCAGGCAGAGAAGAGTCGTGCAGTGTATTTGCCACACGAAGGTGGCATAAAGGCAGCCGTTGGAGTTGTCCGTTTCAAGTGGTCTGAGAAAAGGCTTGTTGCAGTTGCGCGTGCCACGACAGGTGGCCTGTTGAAGACGTTGGCTGAAGGAATGCCTAGAGAAGGCATAGGCAGAATGCAAAGCGAAGGCGACGTCAGTGGTGTCGGTGACAAGCTCAACGGGGGCCAGTTGGGGCTCCGGGCCATGACCCTAGAAGTCGGGGTTCCGTCGAGATTTTGGACGAGCGGCTTTAGAGTTAGATGCATATTAGTGAGATATGTAAGTACGCCAAGTTTCGTGTCAATCGGAGTTCAGACGTGCGCTCTACGTTGGCGAGTGACTCCTCGCCACTTTCGACGTTCATGTCTGCCAAGTCAAGTTTGCCTTAGAATGTACCTTAGGGGGGAGGCATGGTGTTGGCTCTCCACCACCCCTGGGCCATGTCAGGGCCTAGGTGAGCCACCCCATGGCACATGCGTGTGTCATGGCGAGGGCGAGCGTCTACAAGACGAGTGTCTTGGGCGACTTCCGTCGAGGATAGAAAACTCGAGGACAGTGTCGGGCGGCACGGGTGTGCGGGCATTGCGCCTCGGTCCATGTGTCGGAGGTTGCACCACGGGGGTCCCTATGGGGTACGGTATGCTCAAACGACACGGCACGAGCGCAAGAGTCGTCGTGCCACGATAG

Coding sequence (CDS)

ATGGCAACCTTAAAGAGTCATTGGGGCCTTGTTGGGACTTTGCCTACAAATAGAACCATTCCGCTTCATTTTGATATCCTCTGCTCGGCATTCGGAGCTCAGTCTAGCTCGGGCGTGAAAAGTGGATTGGAGCTAGAGTTCCTCGTAAGGCTGGCCATGGTCCAGCTTAGATCATGGCGCCGCACAATTGAAGACTCCGCAAGTGTGTCAAGAGTGCCAGTTTGGCAGGACAGTTGCGTCAGTCAGTATCAGAGGCAGAAAGTAAGAGTTGAAGCCGGACTTCTTGAGACTCAAACGATGTCGTCAATAGGCATTCGATTGGGGGAAGTCCATCCCGTTAGAAAGCAAGACCCAAGTCCTTTGCCTAAGGCTTGGCGGTTTCGTTACAAGCCGGGGGTCAGGGCGACATGCACCGGTCAAGTACAAGAGAAGCATCAAGTAAGTCCACAGTTGGTGGACAGTGTGGCTAAAGCAAAGAGCCAGTTCAGGAAAGGGAAGTGGCCCGAGACAATGGGTCGCTTGCCCCAAGTTGTGCTTAAGAAGTTGCATGACGAGTTTAGAGTGAACGACTTCGCAGAAAAGTTCAAGAGGCCAGTAGTTGCTCAAGAAGGAGCGTTAGTCTGGTGCGATTATGTTCGTGGGAAGCTGCAGGCAGAGAAGAGTCGTGCAGTGTATTTGCCACACGAAGGTGGCATAAAGGCAGCCGTTGGAGTTGTCCGTTTCAAGTGGTCTGAGAAAAGGCTTGTTGCAGTTGCGCGTGCCACGACAGGTGGCCTGTTGAAGACGTTGGCTGAAGGAATGCCTAGAGAAGGCATAGGCAGAATGCAAAGCGAAGGCGACGTCAGTGGTGTCGGTGACAAGCTCAACGGGGGCCAGTTGGGGCTCCGGGCCATGACCCTAGAAGTCGGGGTTCCGTCGAGATTTTGGACGAGCGGCTTTAGAGTTAGATGCATATTAGTGAGATATGTAAGTACGCCAAGTTTCGTGTCAATCGGAGTTCAGACGTGCGCTCTACGTTGGCGAGTGACTCCTCGCCACTTTCGACGTTCATGTCTGCCAAGTCAAGTTTGCCTTAGAATGTACCTTAGGGGGGAGGCATGGTGTTGGCTCTCCACCACCCCTGGGCCATGTCAGGGCCTAGGTGAGCCACCCCATGGCACATGCGTGTGTCATGGCGAGGGCGAGCGTCTACAAGACGAGTGTCTTGGGCGACTTCCGTCGAGGATAGAAAACTCGAGGACAGTGTCGGGCGGCACGGGTGTGCGGGCATTGCGCCTCGGTCCATGTGTCGGAGGTTGCACCACGGGGGTCCCTATGGGGTACGGTATGCTCAAACGACACGGCACGAGCGCAAGAGTCGTCGTGCCACGATAG

Protein sequence

MATLKSHWGLVGTLPTNRTIPLHFDILCSAFGAQSSSGVKSGLELEFLVRLAMVQLRSWRRTIEDSASVSRVPVWQDSCVSQYQRQKVRVEAGLLETQTMSSIGIRLGEVHPVRKQDPSPLPKAWRFRYKPGVRATCTGQVQEKHQVSPQLVDSVAKAKSQFRKGKWPETMGRLPQVVLKKLHDEFRVNDFAEKFKRPVVAQEGALVWCDYVRGKLQAEKSRAVYLPHEGGIKAAVGVVRFKWSEKRLVAVARATTGGLLKTLAEGMPREGIGRMQSEGDVSGVGDKLNGGQLGLRAMTLEVGVPSRFWTSGFRVRCILVRYVSTPSFVSIGVQTCALRWRVTPRHFRRSCLPSQVCLRMYLRGEAWCWLSTTPGPCQGLGEPPHGTCVCHGEGERLQDECLGRLPSRIENSRTVSGGTGVRALRLGPCVGGCTTGVPMGYGMLKRHGTSARVVVPR
Homology
The following BLAST results are available for this feature:
BLAST of Moc10g28380.1 vs.
Match NameE-valueIdentityDescription
BLAST of Moc10g28380.1 vs.
Match NameE-valueIdentityDescription
BLAST of Moc10g28380.1 vs.
Match NameE-valueIdentityDescription
BLAST of Moc10g28380.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Moc10g28380Moc10g28380gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Moc10g28380.1.exon8Moc10g28380.1.exon8exon
Moc10g28380.1.exon7Moc10g28380.1.exon7exon
Moc10g28380.1.exon6Moc10g28380.1.exon6exon
Moc10g28380.1.exon5Moc10g28380.1.exon5exon
Moc10g28380.1.exon4Moc10g28380.1.exon4exon
Moc10g28380.1.exon3Moc10g28380.1.exon3exon
Moc10g28380.1.exon2Moc10g28380.1.exon2exon
Moc10g28380.1.exon1Moc10g28380.1.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Moc10g28380.1cds.Moc10g28380.1_8CDS
cds.Moc10g28380.1cds.Moc10g28380.1_7CDS
cds.Moc10g28380.1cds.Moc10g28380.1_6CDS
cds.Moc10g28380.1cds.Moc10g28380.1_5CDS
cds.Moc10g28380.1cds.Moc10g28380.1_4CDS
cds.Moc10g28380.1cds.Moc10g28380.1_3CDS
cds.Moc10g28380.1cds.Moc10g28380.1_2CDS
cds.Moc10g28380.1cds.Moc10g28380.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Moc10g28380.1Moc10g28380.1-proteinpolypeptide