Moc10g11600.1 (mRNA) Bitter gourd (OHB3-1) v2

Overview
NameMoc10g11600.1
TypemRNA
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Locationchr10: 8841696 .. 8852460 (+)
Sequence length1905
RNA-Seq ExpressionMoc10g11600.1
SyntenyMoc10g11600.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAAGTGACAAAGAGTTGTTCAAGGACCCTGACAAGTCATTCAAGTCAAGGGTGAAGATAGGAAATGGTGAGTATCTAGAAGTGAAAGAGAGCTGTGCTGGAACCAAGTTAATTAGTGAAGTGTTGTTTATTCCTGAGATTGATCAAAACCTGTTAAGTGTTGGTCAGCTGGTAGATCAAAGATTTAAAGTGTTGTTTGAAGATGAGAAGTGCCTCATTTCTGATTCCAGTGGGAATGAGTTGTTCAAAATAAAGATGCAGCACAAGAGCTTTTCATTAGATCCATTCAAAAAGGAGCAAATAGCTTTCAAGTGTCAAGTGAATGACACTAAGTTATGGCACAAAAGGTTGGGGCATTTTCATCATAAGGGGTTGCAGTATCTCCAGAAAAATGATTGGAGTAACAATTGGAATAATAAATTGTTTGATATGTTACTTGAATTGTTAAACGAAGCATTGACGATAGTTGCATCTATACCTAGTACATCATACGAGGCTAAAAGGAGGCTGCGTGATTTAGAACTTTCATATGAGTCCATACATGCCTGCAAGTATGACTGTATATTATTCAGGAAAGAATATTCTGAATGTCAAAGTTGTCCAGTACGTGGTGAACCTCGTTATAAAAACAGTGATGGGAAAGCTTCACAAGTCCCCCAAAAATTGTTATGACATTTTCAGTTGATACCAAGATCGAAAAGGTTCTTTTCTTCAACACATTTCGCTTCTGAAATGAGGTGACAAAAAGAAAAACGAGTTGAGACAGCGGGTGTTTTACGACATCCAGCTGACGCTTTGGGGTGGAAGCATCTAAATAGCACATTTCCTCGATTTGCTTCAGACCCACGAAATGTTCGTTTGGGACTAGCTTCAGATGGGTTTAATCCGTTTGGGAATATGAGCAATTCATATAGCATGTGGCCAGTGGTACTTATTCCATACAATTTGCCTCCTTGGAAATTCATTAAGGCAAATAATTTATTAATATCATTGCATATTCCTGGGCCGAAGTCACCTGGAAAAGATATTGACGTTTACATACAGCCATTAATTCAAGAGTTAAAAAGAGTTATGGGATACTAGGGTTTGTACTTACGATTGTGCAAGTGGTGAATACTTTCAACTACATGCTGGTCTTTTACGGACTATCAATGACTTTCCAGCATATGCGACTTGTTCGGATGGAGTACGAAGGGATACCAAGCATGTCCTATATGTAAAGATGATAATTCATCTTTTTGAATAAGAAACAAAATTTGTTTCATGAGACATCGACGTTATCTTCCACAAAATTATAGTTGACATGTGAGTAGATTGCATGATGGAAAGTTAGAACAACGCCTCCACCAGTGTCAATGGATGGAGATGCAATTCTTCAACAAGTAAATACACTGAATTTTCTAGATTTTGTTAAGAATCCAACCAAACAAAAGAGTAAAAGAAAGCGAGAATTAAATTGGACAAAAAAAAGTATATTCTTCGAACTTCCCTATTGGTTGAAACTTATGTTAAGACATAAATTGGATGTGATGCATATCAAGAAGAACATATGCAACAATCTAGTAGAAACTTTGTTAAATATTGATGGGAAAACAAAAGACACGATCAATGCACGTTTGGATTTGGAAGATTAAAAAAATTCGGAAAGATTTACACTTACAAAAGTAGGGGAATAAAGTAGTAAAACCACATGCTACATATACATTAACTGCTGCTGAGAGGGTGAAGTTTTGCAAATTATTGAAATCAGCTAAGTTTCGAGATGGATTTGTGTCAAATATATCAAGATGTGTGAGCGCAAAGGATGAGAGACTGTAGGGGTTCAAAACTCACGACTGTCATGTTTTGCTACAATGACTCTTATCGATTGCCATTCGAGCATACGTACTAAAGTTTGTGGGTACGACTATCATTGAGCTATGTAACTTCTTTCGTGATATATGTGCAAAGACAATACGCATCAGTGATTTGGATCGATTGCAATCTGACATTATAATCATACTATGTAAGTTAGAGAGAATATTCCCATCAGCATTTTTTGATGTTATGATACATCATGCAGTTCACTTACCATACGAAGCAAAAATTGTGGGGCCAGTTAGTTACAGTTGGATGTACCCTATCGAGCGAAGTCTCCGAACTTTAAAACAATATGCACAAAAGAAGAACAAAGCTCATCCTGAGGGTTCGATAGCCGAAGCATTCGTCATGAATGAATCGTTGACTTTCTGCTCATTGTATCTAAGTAGAATTAAAATGAGATTCAATAGAGATGAATGCAACGATGATACTATTGCCGGTTATAAAAATTATGGGCAGTTTGATGTGTTCAGGCTAAGTGCACGTCCTCTAAGGGCATCAACTTCGAAAACATAATCTATCATTGAAAGAAAAGTTGCACACTGATATGTACTGAACAACTGTGCAAAGATAGAGTCGTATCACAAGTAAGTTCGACTTATGCTACGTTCATTTTAATTTCACACTTAGTACATATAACACTAATTTTGTTTTTCTCCTTTTTTTGGAATTGTAGTCAACATTTGAGCTTAATTCGAATCCTTGGAGACAATGTTTCTATCCTATATGAACGACACAGTACACCATTTCCTGATTGGTTAAAAAAAAAGGTAATATTGATTTCTAGGGTTTTAATGTAGATGAACAAAAAACAAAATCGTTAAGTATTTTGTTATGATCTATTACAGGTTTTGACATTAAGGGAACAAGGCGAATTAGATGATGATCTTTATTCACTTGCGTTAGGGCCCTCACTAACTACACGTTCATATAGTGGTTGTATTGTAAACGGATTACGCTTCCATAATATAGAACGCGATAGTCGTCGAACGACACAAAATAGTGAGGTCATGGTGTGTGGAGAAGAAGAGGATGACATGAATTTTTATGTTGTATTGAGTGATATTTGGGAGTTAGATTATGCTAAGGGGAGACGTGTCATAATTTTTAAGTGCAAATGGTTTGACACGTACTCTGAGAAGAATAGAATTCGAGTTGACTTAGGTTTTAAGTCGATTAATACGTCTAAGTATTGGTATGCCGACGACCCGTTCATTCTCGCTGGTCAGAAGCTTGGTAATAATTGGAAAGTTGTGCAACATATTCTAAATAAACTTGTATGGGATATTCAAAACAAGAAGACGTTGAAAATGATCAAATTTCGTTGTTAAAAGTAGGACCTAAGATCGAAATTGATGAATCCACTTAAGATAGTTCATTGCGTCGAGATGATGTTGATCCTATTGTCGTAGAGGGTCGAGAACAGTCCAATAGAAGCATAGATACGAGCAATGTGAATTATTTTATAAATGACGAATCAGACGGGACGCGTCAATTGGTAATAGTATAGATGATGTTGATGGTGAGTACTATAACGAATAAGTATTCCTCCAAGTATGTCGATTTAAATATATGTTGTATAAATTATGCATCAAATTGATTTATGTTGAGTATTTGTTTTGTCAATATATAATACTTTTCGTTGGTTGCCTAAGTTCGTAGAAGAATGAGACCAGATCAAGTAGGTCAGTTACAGTTGCATGTATAGAGGTCATGAGCATCCACTAGTAGACCCACCTGTTCTGGCTTTTCCTCCAAGTACATAAATTTAAATATATGTAAAATAAATAAGTATGATTTAACTAATTGGTTTACTGTTTGGCAACATACAGATAGATTAGACATGCGAAGATATACCTGATTGATAGAGCTAGAAAATCAAGTTTGTGCAACAAATAAAAGATACATATTCAATGTGACCACATAGTTAATAAACCAATATGTCCCATGGCCACCACATTCTCTATTGCGATCGGGGTACATACATGCAAACAAGTGGACCTAAAGGTTAACAAGTGGAGTGAGGTCGAAGATATTCAGAAGAGGACAATTATAACTCAACTCAAGGTTTGAGATTAATTACTTAATATGTTTTATCATTTTTTATGATGCAACAGTAATAACACTTAAATATATGTTCGATGTTTTTCTGTTGTATGGTCATTTCGATTTCAACGAATCAGTGAGCATGAGATGAGATCGACACATAAGGCGTATAGGCACAATTGCGCCAACACTACCTGAGTTATCTCACACCTGAGATTGCACACAACAATCCTCTAGAGCGGTTGTTGGCAAAACCAGACGATTGGAACATGTTGTGCGATAGATGGGAGACAGATGAGTGAAAGGTAATTTACGAATATAATTTATACTTTTTTTTTAGAATTTATATTCAATATATATTCTCATTTAAGTTTTCTTTTGTTAGAAAAAATCTGAGACCAACAAATGCAACAGGGCGAAGATGTCATTCAACCATCGTGCGGGGCCAAAGGCATTTACTATTATTGCAAAGGGGAAGGTACAATGCAATAATATTTTTTTAGCCATATACTTATATTACTTAAGATCGATTACCAACAATTATGTGTTATCAATTGCAGAAAGAATAAGAGGGAGGTGACAATTTTTCTGAAATCGATTTGTTCAGGGAGACTAGGTACTCTGACACTAAAGGTTGGGTCGAAGGAGCGGAGACAGCTTACGTAAGTTTACAAATCTTATAACAATTAACTTCAAATTAAGCATTGAATTTTATGTGTAAACATTTTGTTCATTTTTTAAATATGTATATAGCTAGACATGATGCGTGTAAGAGAAGAATCTACGGAAGATGGAGGTGAACCGATGCCAGACCCAGAAGAATTGGAAACAGTTCTTGGTTATCGATCAGGCTACATTAGGGGTGCTGGTTGGGGCCCAAAACCAAAGTCTTGTAGAGATTCTGCTTCAAGTGTAGCATCTTCACAATGGGAAGAAGAGCTGTCTCAAGAAATATACACTATAAGAGAAGAATTTCAGGATCGTCTCACGCAGAAAGACTTGAGGAACCTCTCTCTCAGAAAGACAAAGAGCTTGATGATCGTCTCTCTCAGAAAGACAAGGAGTTAAATGAGCTTGTTGAATTTTAAGTAAATTTGTGATAGAGTTTGTGTTTGGATAACGTTGTTGAATTTTAAGTGAATTGGTGATAGAGTTTGTGTGCATGTTTTTAAGTTTTGTGAAACTTAGTGAGAGTAAGTTTTGTCAATTTGAAAGTTTTTTGAATATATGAAAGTGTTTTTTTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTACTAAGTGTTTTTGGATAACGTTGTTGAATTCTAAGTGAATTGGTGATAGAGTTTGTGTGCATGTTTCTAAGACTCAGTGAGAGTAAGTTTTGTGAATTTGAAAGATGTTTTAATGTGTTTTTGTTAACTTTTAATGTATACTTTGAGTTCATGCATATGAAGTGAGAATGACATTTTTAGTTCATGGCATGTGGAAAGTTTGAATGTTTAGTTTGTCCTGTGGAATGAGTTAGAATTGAAAGTTTGTTTGAGTGGAAGTGGTGAGTTAACTTATGGAAGTGTTTTTGTTAACATAAGTTTATTTGTTATTTGTTTTTCAGGTTCGTTCGATTTCTGTATCGAAAGCTTCTAAAAAGTTGATAATATCTCTCGTGAAAAATTTGATGATATGAAACATTTTTCATATGTTTAGGTTTTGTATTTTGGGACTTCTTAGAATAGGTTGTTCAATTTTAGTTTGTATGGACTTTTTGTACTTTTTGTAAAACCAATTTTTGTTTAATATTATAAATTTTTATATGAAATTTGAATGGCATCTAGGTTTTTATTATTGAAGTAATATATGGTTGAAAGGAAAAACAAAAAACAAAAAAAACAAACATCGAGATTTCGTCGTCGAAGGTAGCATTGGCAACCAAATAAGATTTCGTCGTTGAAGGTCACCTTCGGCGACCAAATCTATGTCGTCGCTAAAGGCACCTTGGGTGACCAAATCCATGTCGTCGCCGAAGATATCTTCGGCGACGACTATGAATTTGGTCGTCGAAGGTACCTTGGGCGACCAAATGAACTTTCGTCTCAGAAGGTGACCTTCGGCGATAAAAAATAGAAGTCGTCGCTGAAACCCTCTCACGACTGGGCAACGGCGACGATTCTAGCGACGACTTGTTTTCATCGCCAAATATTTTTGGGACGAATTTTGACCTTTTAACGACGAAATTTGTCATCGCTGAAACTCTGAATTCTTGTAGTGACTTCCCTTGTCTATGATCCTATAAAAATCACAAACTTGACTTTCATTCTTTTCTGTGTACTTTCTTTGGCTATAGCAATATTCACAAAGGTTTTAAGTGTCTTTCCGCCTTTATATCTCTCAAGATGTTACTTTTGATGAAACTTGTTTTCTCTTTTCTACAACATTCTCTCCTAGAACTCCTTCCTCCCCCATGTAATGTTTCCTCTCCCAATCACTTCCCCACCTCAAATTCTTCATCCTCTTCCATAGAGGTATCTGCTCCTGCTACTACTTGTATTAATAATTCAAGTTCTACTAGGATGACAACTCAAGCCAAAAATAGTATTTTCAAGCATAAAGTTCTCAACCTCCATATATGAAAATCATAGATTGTAAATGGGTATTAAAAATCAAAAGGAATTCATATGGGTTAGTTGCTCTTTACAAAGCCAACCGGAGACATAGACTATAAAGAGACATTTAGTCCTATTGTAAAACCTATAACAATATGGGTATTACATACTCTTGTCATTGTATGTGGATGGTCTATTCGATAAACTGATATCAACAATGTTTTTCTGCATGGTATTCTTAATGAAATAGTGCATATGGATCAACCACCAGGATTTATTGTTATTGGTTCTAATAGACTTGTTTGCAAATGGTCTTAAACAGGCTCCACGTGCATGGTTCAAAAAGTTGAGTTTTTATCTCCATTCTTTGGGCTTTATTTACTTTAAGTCAGATCCTACTTTGTTGATTCGTGTCTTGAAGTCATTATTGTTACATTCTTGTTTATGTTGATGACATTGTCATCACAGGAAGCTCCTCTTCTTATATTACAGACTTTATTTCTCTACTTCATGCGAAATTCTCACTTAAAGATCAGATAATTGAGTTTTTTCTTGGCGTGGAGATTTCTTATCTCTCCTCTGGTGGTTTGTATCTCTCTCAAGAAAAATATATTAACGATATTTTGCATAAAACTAGGATGTTTGAAGCCAAAGCTATTTTCACTCCAATAGTTAGTGGCCAAAGCTAGGATGTTTTAATCTCACTTTGTAACACCGTTGATTGACGAGATTAATATGTCATAGGGTGACCATATGTAACTCAATTTCAATCCTGAGTGAGTTATGAACTTTTGTCTATGAGGGATCGTCCTTTGATTTGTATGGGTGAGAGTGACCCGGGTTCCCGACTTAATAATCCTACTATTTTGAGAATAAGACCGAGTGGTGAGCTGGGAACATAGCCACATATGATGAAATTTACTTCTTGTCATATTTAAGGTAGGTAGAAGAGTTATTCCCTTAAGTGCTGACTCCGAGTCTTGAACAATGGGACCCTACTCTCTCACAGGTCTGAGAGGGACTTAGTTTATGGTTCGACCATAAACAGATTGTTCATTATAGTACTAGTGGTACTTGAAGAGTGATGAGTAATTACAAGGGTAAATCGATAATTTGACCTATCTATAATTACAGACGAGTACTCGTGAAGGATTGACTTACTTGTAATGGTTATATCTATGGACGCAACATGTTTTACAGTGCATAAGAGTGCAATTATGGGTCTTTAGTGGAATGTCTCATATTTAATGAATGTTGATTAATTTAATTAATAAGTTTAATTAATTAATCTCGGGTCATTGGAACTTATAATCTGTATGTCCATTAGGTCTCATTGCTAGCTCACAATGAATAAAACGAAGATCAAGAGTTCTGAAAGAATTTGAAGTGTTCAAATTATATAACGGAATGTAGGTTAATTGTATAAGATAACATTAATATAATGTATATGTAGATCCATTATAATTTTGGATAGGATTTGAAATTAAACTGTATAATATGAGAGATATATTTGAATTTTGATTGAAATAAAGGTTTAATTTTAATTAATTAATTAATTTAATAATTATTTCATTTAATTAAACTAAATAACTCCACTATATTTTTAAAGGGGAGTGGGGAAGTGATGCGGTGGGAATCAACTTCCCCTGTTAAATGCAAAGAATCTCTGCGTTGAAAAAAAGAATTAGTTTGCTCCCTCTCCTGGAAGATCTCTCCCAACGATTACAGAGTGTAAAGAATTCTTTGTGAGAAAATTTTTAACCGATCCATACCAGGTCCATACCAGAGAATAGAAGGGAAGATCTTTTGGAGACATTGGTTTGCTGTGTTTTTTAAGAGGTTCTTCAAAAGTTTTTTTTTTTCCTCATCTCAATTCTCAACCTTTAGTGCTTATGGCTTTTATGTACTTTTTTAAAGGAAAAATCGAAGCATTGTATTCACATACTTCCACTATGGAATTTGATCCCTTCATAATAATGAGAATTTTAATTTTTGTGACGCGTGTAAGTATGACAAATTTCACATATTCTCTTCCTTTTCCCAATTCTAGCTCTCATGCAACCGCCCCCTAGTGGGGGCTCGACACCTATTGTTTTTACATGAGGTTATAGATATTATGTTCATTTTACTTTTACTTTTGTATGATTTTAACAGGTTTGTTTTGATTTATCCTTTAAAGCTTAAAAAGCAAAATTATTACCGCCTTTAATCCTTTTCTAACAATGGTTAAAAGTCAGTTTAAATCCTCTACTATAAGTTTGCAATCTGATAATATACTCATATTCATCAACTATATGCTTAGCTAGGTATTCAGTATCGATATTCTTATCCCTATACCTCTGCTCAAAATGGTCGAGGCGAAAGGAAGGCACTGTCATATTATTGAAACCGGCTTGACCTTACTTGTCCAAACATCGATGCCTCTTTGCTACTGGTGGGAGGCCTTTCGGACTCCAACATTACTAATTAATGAACTTCCATCATCTGTCCTTTGTGGCAAATTGCCTTTGGAATCGGTACTTCACAAGCAGTTGAACTACTTGGATTTAAGACCATTTAGGTGTGCCTACTTCCCATTTATTCGCTCGTTTAACTCCCATAAATTCTCCTTTCAATCCGAAAAAATGTGTCTATTTGAGTCCAAGCTCAATTCTCATAAAAGGCCATAAATGTCTTAATTCCACTTATCAAATTTTTATCTTTCGCCATGTTCAATTTAACGAAGCAGAATTTCCTTTTGCATATGGGTTCTGAATTTCTGTACAACCCGTGTCACCATCACCCACCTTGTATCAGCCTACTTACATTAATCTCAAACCAACCCAATGGTTTTTGGGGTAACAATAGATATAGCTTTTCAAAATAGGCAATTTTAAAAAATGGTCAAATAACTTTCAATTTTCAATAATAGCCATAATAAAGACACGAAGATCTCTACCACTTTTTTAAATACGAAATTACCCTATCCCTAAAATGATTATTAATTAATATATTACTTCTCATTTTTGCAGAGAATCCTACCTATATTTTTCCTAACCATTATTATAGATTAATTCAAATATTTTTAGAATCTTACTTATATTTTCGAATTCAAATTTTCTTAACCAATTTTTAGGAGAATTATACTAACAAAAATATTCATTAAATTAAAATCTAAAACAAAATTTAAACAAGAAAATAATTATTGAAAATTATACTAAAAAGGTAAAATGTAAACAATAAACAAAATAAGGTAAACTGAATAACAAATACGACGAAGGTGAATGGAAGAACAAATATGGCGAAGGTGAAGAAGGTGAACGACGGAACAAATACGGCAAAGGTCAATGGCGAAACAAATACGGCGAAGGTCAACGACCGAACAAATACGAAGGTCAACGGCGAAACAAATACGAACAAATAATTTGAAGAATAAGGTGTAGTTTTTTGAACAATTAATACAAAAATATAAAGCATTATACCTACCTCAAACCAAAAGACAATACGTAGAAACTCAACATATAGGTCTCTCTCTCCTTGTAACCCCTCTATCACTCACTGCGTTGCGTTGCCCCACAATTGCCTAACAAGATTTGTCTCCCTCTCTTGATTTTACCGTACCCTCAGCTCTGATCATTTCCAATCGTCTTCCTCCCTGATCCTCCCCTTATGTATCCACTTATCAAGTTTATAACAATAATGGTTAAAAAGAAAACTAGAATCAAGGAGGGAGGGATAGAATCTAGGAGATATAAGGGAAGTTAAAAGATATTTTGTTTTTAAAAATAATAACGAAATAGAAACGGTAAAACAAATAGAAAGGGTAAAAGTGTAAAAAATAAACCAAATATAAATGGACATTTTCATTATCCATAATTATTTGGCCATCTTCAAAACTAGGTGATAAAAAAGGAAACCTGCTATAAATTCTCATGGTTTTTTCCACCCCACAATCTTACTATTTCAGCTCATGATCCCGTATCTTCTGCCCTTACCACCCTCATTCCATACCATTCTGCCCACTCCTTTATCTTCACACCAAAACCCATATCTACTAGCCATATGCATGACCTGCCAAACCCATGCACCTCCCCTATACCCACTTTGCCTTATCCATGTGCCTACAGCCTCCACGAGTATCACTCCAATTCAACATCATCGTCTGCATCATATTCACTTTCCCAAACTTTTCCTTCAATTGATTCTTACCCACCGTCGACACCACCACCTGCACAGTCGCCGACCCCGCCATCTACACCAATGCTTGCTGCTGCGTGCTTACAATTGAGGTGA

mRNA sequence

ATGACAAGTGACAAAGAGTTGTTCAAGGACCCTGACAAGTCATTCAAGTCAAGGGTGAAGATAGGAAATGGTGAGTATCTAGAAGTGAAAGAGAGCTGTGCTGGAACCAAGTTAATTAGTGAAGTGTTGTTTATTCCTGAGATTGATCAAAACCTGTTAAGTGTTGGTCAGCTGGTAGATCAAAGATTTAAAGTGTTGTTTGAAGATGAGAAGTGCCTCATTTCTGATTCCAGTGGGAATGAGTTGTTCAAAATAAAGATGCAGCACAAGAGCTTTTCATTAGATCCATTCAAAAAGGAGCAAATAGCTTTCAAGTGTCAAGTGAATGACACTAAGTTATGGCACAAAAGGTTGGGGCATTTTCATCATAAGGGGTTGCAGTATCTCCAGAAAAATGATTGGAGTAACAATTGGAATAATAAATTGTTTGATATGTTACTTGAATTGTTAAACGAAGCATTGACGATAGTTGCATCTATACCTAGTACATCATACGAGGCTAAAAGGAGGCTGCGTGATTTAGAACTTTCATATGAGTCCATACATGCCTGCAATCAACATTTGAGCTTAATTCGAATCCTTGGAGACAATGTTTCTATCCTATATGAACGACACAGTACACCATTTCCTGATTGGTTAAAAAAAAAGGTTTTGACATTAAGGGAACAAGGCGAATTAGATGATGATCTTTATTCACTTGCGTTAGGGCCCTCACTAACTACACGTTCATATAGTGGTTGTATTGTAAACGGATTACGCTTCCATAATATAGAACGCGATAGTCGTCGAACGACACAAAATAGTGAGGTCATGGTGTGTGGAGAAGAAGAGGATGACATGAATTTTTATGTTGTATTGAGTGATATTTGGGAGTTAGATTATGCTAAGGGGAGACGTGTCATAATTTTTAAGTGCAAATGGTTTGACACGTACTCTGAGAAGAATAGAATTCGAGTTGACTTAGGTTTTAAGTCGATTAATACGTCTAAGTATTGGGAGACTAGGTACTCTGACACTAAAGGTTGGGTCGAAGGAGCGGAGACAGCTTACCTAGACATGATGCGTGTAAGAGAAGAATCTACGGAAGATGGAGGTGAACCGATGCCAGACCCAGAAGAATTGGAAACAGTTCTTGGTTATCGATCAGGCTACATTAGGGGTGCTGGTTGGGGCCCAAAACCAAAGTCTTGTAGAGATTCTGCTTCAAGTGTAGCATCTTCACAATGGGAAGAAGAGCTGTCTCAAGAAATATACACTATAAGAGAAGAATTTCAGGATCGTCTCACGCAGAAAGACTTGAGGAACCTCTCTCTCAGAAAGACAAAGAGCTTGATGATCGTCACCTTCGGCGACCAAATCTATGTCGTCGCTAAAGGCACCTTGGGTGACCAAATCCATGTCGTCGCCGAAGATATCTTCGGCGACGACTATGAATTTGGTCGTCGAAGGTACCTTGGGCGACCAAATGAACTTTCGTCTCAGAAGGTATTCAGTATCGATATTCTTATCCCTATACCTCTGCTCAAAATGGTCGAGGCGAAAGGAAGGCACTGTCATATTATTGAAACCGGCTTGACCTTACTTGTCCAAACATCGATGCCTCTTTGCTACTGGTGGGAGGCCTTTCGGACTCCAACATTACTAATTAATGAACTTCCATCATCTGTCCTTTGTGGCAAATTGCCTTTGGAATCGGTACTTCACAAGCAGTTGAACTACTTGGATTTAAGACCATTTAGCCTCCACGAGTATCACTCCAATTCAACATCATCGTCTGCATCATATTCACTTTCCCAAACTTTTCCTTCAATTGATTCTTACCCACCGTCGACACCACCACCTGCACAGTCGCCGACCCCGCCATCTACACCAATGCTTGCTGCTGCGTGCTTACAATTGAGGTGA

Coding sequence (CDS)

ATGACAAGTGACAAAGAGTTGTTCAAGGACCCTGACAAGTCATTCAAGTCAAGGGTGAAGATAGGAAATGGTGAGTATCTAGAAGTGAAAGAGAGCTGTGCTGGAACCAAGTTAATTAGTGAAGTGTTGTTTATTCCTGAGATTGATCAAAACCTGTTAAGTGTTGGTCAGCTGGTAGATCAAAGATTTAAAGTGTTGTTTGAAGATGAGAAGTGCCTCATTTCTGATTCCAGTGGGAATGAGTTGTTCAAAATAAAGATGCAGCACAAGAGCTTTTCATTAGATCCATTCAAAAAGGAGCAAATAGCTTTCAAGTGTCAAGTGAATGACACTAAGTTATGGCACAAAAGGTTGGGGCATTTTCATCATAAGGGGTTGCAGTATCTCCAGAAAAATGATTGGAGTAACAATTGGAATAATAAATTGTTTGATATGTTACTTGAATTGTTAAACGAAGCATTGACGATAGTTGCATCTATACCTAGTACATCATACGAGGCTAAAAGGAGGCTGCGTGATTTAGAACTTTCATATGAGTCCATACATGCCTGCAATCAACATTTGAGCTTAATTCGAATCCTTGGAGACAATGTTTCTATCCTATATGAACGACACAGTACACCATTTCCTGATTGGTTAAAAAAAAAGGTTTTGACATTAAGGGAACAAGGCGAATTAGATGATGATCTTTATTCACTTGCGTTAGGGCCCTCACTAACTACACGTTCATATAGTGGTTGTATTGTAAACGGATTACGCTTCCATAATATAGAACGCGATAGTCGTCGAACGACACAAAATAGTGAGGTCATGGTGTGTGGAGAAGAAGAGGATGACATGAATTTTTATGTTGTATTGAGTGATATTTGGGAGTTAGATTATGCTAAGGGGAGACGTGTCATAATTTTTAAGTGCAAATGGTTTGACACGTACTCTGAGAAGAATAGAATTCGAGTTGACTTAGGTTTTAAGTCGATTAATACGTCTAAGTATTGGGAGACTAGGTACTCTGACACTAAAGGTTGGGTCGAAGGAGCGGAGACAGCTTACCTAGACATGATGCGTGTAAGAGAAGAATCTACGGAAGATGGAGGTGAACCGATGCCAGACCCAGAAGAATTGGAAACAGTTCTTGGTTATCGATCAGGCTACATTAGGGGTGCTGGTTGGGGCCCAAAACCAAAGTCTTGTAGAGATTCTGCTTCAAGTGTAGCATCTTCACAATGGGAAGAAGAGCTGTCTCAAGAAATATACACTATAAGAGAAGAATTTCAGGATCGTCTCACGCAGAAAGACTTGAGGAACCTCTCTCTCAGAAAGACAAAGAGCTTGATGATCGTCACCTTCGGCGACCAAATCTATGTCGTCGCTAAAGGCACCTTGGGTGACCAAATCCATGTCGTCGCCGAAGATATCTTCGGCGACGACTATGAATTTGGTCGTCGAAGGTACCTTGGGCGACCAAATGAACTTTCGTCTCAGAAGGTATTCAGTATCGATATTCTTATCCCTATACCTCTGCTCAAAATGGTCGAGGCGAAAGGAAGGCACTGTCATATTATTGAAACCGGCTTGACCTTACTTGTCCAAACATCGATGCCTCTTTGCTACTGGTGGGAGGCCTTTCGGACTCCAACATTACTAATTAATGAACTTCCATCATCTGTCCTTTGTGGCAAATTGCCTTTGGAATCGGTACTTCACAAGCAGTTGAACTACTTGGATTTAAGACCATTTAGCCTCCACGAGTATCACTCCAATTCAACATCATCGTCTGCATCATATTCACTTTCCCAAACTTTTCCTTCAATTGATTCTTACCCACCGTCGACACCACCACCTGCACAGTCGCCGACCCCGCCATCTACACCAATGCTTGCTGCTGCGTGCTTACAATTGAGGTGA

Protein sequence

MTSDKELFKDPDKSFKSRVKIGNGEYLEVKESCAGTKLISEVLFIPEIDQNLLSVGQLVDQRFKVLFEDEKCLISDSSGNELFKIKMQHKSFSLDPFKKEQIAFKCQVNDTKLWHKRLGHFHHKGLQYLQKNDWSNNWNNKLFDMLLELLNEALTIVASIPSTSYEAKRRLRDLELSYESIHACNQHLSLIRILGDNVSILYERHSTPFPDWLKKKVLTLREQGELDDDLYSLALGPSLTTRSYSGCIVNGLRFHNIERDSRRTTQNSEVMVCGEEEDDMNFYVVLSDIWELDYAKGRRVIIFKCKWFDTYSEKNRIRVDLGFKSINTSKYWETRYSDTKGWVEGAETAYLDMMRVREESTEDGGEPMPDPEELETVLGYRSGYIRGAGWGPKPKSCRDSASSVASSQWEEELSQEIYTIREEFQDRLTQKDLRNLSLRKTKSLMIVTFGDQIYVVAKGTLGDQIHVVAEDIFGDDYEFGRRRYLGRPNELSSQKVFSIDILIPIPLLKMVEAKGRHCHIIETGLTLLVQTSMPLCYWWEAFRTPTLLINELPSSVLCGKLPLESVLHKQLNYLDLRPFSLHEYHSNSTSSSASYSLSQTFPSIDSYPPSTPPPAQSPTPPSTPMLAAACLQLR
Homology
[Close]
BLAST of Moc10g11600.1 vs. NCBI nr
Match: XP_022158688.1 (uncharacterized protein LOC111025149 [Momordica charantia])

HSP 1 Score: 209.5 bits (532), Expect = 8.3e-50
Identity = 114/176 (64.77%), Postives = 132/176 (75.00%), Query Frame = 0 

Query: 1   MTSDKELFKDPDKSFKSRVKIGNGEYLEVK-------ESCAGTKLISEVLFIPEIDQNLL 60
           M SDKELFKD D+SFKSRVKIGNGEYLEVK       ESC GTKLI+EVLF+P I QNLL
Sbjct: 273 MXSDKELFKDLDRSFKSRVKIGNGEYLEVKGKXTXSIESCVGTKLITEVLFVPXIAQNLL 332

Query: 61  SVGQLVDQRFKVLFEDEKCLISDSSGNELFKIKMQHKSFSLDPFKKEQIAFKCQVNDTKL 120
           SVGQLV++ FKVLFE EKCLISDS+GNE FKIKMQHKSFSLDP +K+QI  KCQVNDT+L
Sbjct: 333 SVGQLVEKGFKVLFEYEKCLISDSNGNEWFKIKMQHKSFSLDPVEKDQIVSKCQVNDTEL 392

Query: 121 WHKRLGHFHHKGLQYLQKNDWSNNWNNKLFDMLLELLNEALTIVASIPSTSYEAKR 170
            HKRLGHFH +GLQY Q+N+ +      +   +LE L     +V     T Y ++R
Sbjct: 393 RHKRLGHFHQRGLQYQQENEMT------IGVPILEELKTNCGVVRIDTGTEYTSQR 442

[Close]
BLAST of Moc10g11600.1 vs. NCBI nr
Match: KAA0043367.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 192.6 bits (488), Expect = 1.0e-44
Identity = 99/132 (75.00%), Postives = 112/132 (84.85%), Query Frame = 0 

Query: 1   MTSDKELFKDPDKSFKSRVKIGNGEYLEVK-------ESCAGTKLISEVLFIPEIDQNLL 60
           MTSDKELFKD D SFKS+VKIGNG YLEVK       +SCAGTKLI++VLFI EIDQNLL
Sbjct: 1   MTSDKELFKDLDISFKSKVKIGNGAYLEVKGKGTVSTDSCAGTKLITKVLFISEIDQNLL 60

Query: 61  SVGQLVDQRFKVLFEDEKCLISDSSGNELFKIKMQHKSFSLDPFKKEQIAFKCQVNDTKL 120
           +VGQLV++ FKVLFE+ KCLISDS+GNELFKI MQHKSFSL+  ++EQ+AFKCQVNDTK 
Sbjct: 61  NVGQLVEKEFKVLFEEGKCLISDSNGNELFKINMQHKSFSLNLLEEEQVAFKCQVNDTKF 120

Query: 121 WHKRLGHFHHKG 126
           WHKRLG F  KG
Sbjct: 121 WHKRLGIFISKG 132

[Close]
BLAST of Moc10g11600.1 vs. NCBI nr
Match: TYJ98110.1 (putative transposon Ty5-1 protein YCL075W family [Cucumis melo var. makuwa])

HSP 1 Score: 191.4 bits (485), Expect = 2.3e-44
Identity = 99/132 (75.00%), Postives = 111/132 (84.09%), Query Frame = 0 

Query: 1   MTSDKELFKDPDKSFKSRVKIGNGEYLEVK-------ESCAGTKLISEVLFIPEIDQNLL 60
           MTSDKELFKD D SFKSRVKIGN  YLEVK       +SCAGTKLI++VLFIPEIDQNLL
Sbjct: 151 MTSDKELFKDLDISFKSRVKIGNSAYLEVKGKGTVSTDSCAGTKLITKVLFIPEIDQNLL 210

Query: 61  SVGQLVDQRFKVLFEDEKCLISDSSGNELFKIKMQHKSFSLDPFKKEQIAFKCQVNDTKL 120
           +VGQLV++ FKVLFE+ KCLISDS+GNELFKI MQ KSFSL+  ++EQ+AFKCQVNDTK 
Sbjct: 211 NVGQLVEKEFKVLFEEGKCLISDSNGNELFKINMQRKSFSLNLLEEEQVAFKCQVNDTKF 270

Query: 121 WHKRLGHFHHKG 126
           WHKRLG F  KG
Sbjct: 271 WHKRLGIFISKG 282

[Close]
BLAST of Moc10g11600.1 vs. NCBI nr
Match: KAA0045598.1 (uncharacterized protein E6C27_scaffold243G001040 [Cucumis melo var. makuwa])

HSP 1 Score: 184.1 bits (466), Expect = 3.7e-42
Identity = 85/150 (56.67%), Postives = 111/150 (74.00%), Query Frame = 0 

Query: 186 QHLSLIRILGDNVSILYERHSTPFPDWLKKKVLTLREQGELDDDLYSLALGPSLTTRSYS 245
           +HLSLI   G++V  L+ RH   FP+W +  + +LRE+GE  DDLYS+ALGP    R+YS
Sbjct: 432 EHLSLINTRGEDVLDLFRRHQLEFPNWFRTHMYSLRERGEASDDLYSIALGPINEVRTYS 491

Query: 246 GCIVNGLRFHNIERDSRRTTQNSEVMVCGE-EEDDMNFYVVLSDIWELDYAKGRRVIIFK 305
           GC VNGLRFH+IERD+RRTTQNS +M  GE + D+ N+Y VL ++ +L+Y K RRV +FK
Sbjct: 492 GCFVNGLRFHSIERDNRRTTQNSGIMAYGETKADETNYYGVLQEVLDLEYLKCRRVCLFK 551

Query: 306 CKWFDTYSEKNRIRVDLGFKSINTSKYWET 335
           C WFDT  +KN+ R DLGFK INTS++W T
Sbjct: 552 CNWFDTDVKKNKFRCDLGFKIINTSRFWYT 581

[Close]
BLAST of Moc10g11600.1 vs. NCBI nr
Match: KAA0038099.1 (uncharacterized protein E6C27_scaffold36G003190 [Cucumis melo var. makuwa])

HSP 1 Score: 182.2 bits (461), Expect = 1.4e-41
Identity = 84/150 (56.00%), Postives = 111/150 (74.00%), Query Frame = 0 

Query: 186 QHLSLIRILGDNVSILYERHSTPFPDWLKKKVLTLREQGELDDDLYSLALGPSLTTRSYS 245
           +HLSLI   G++V  L+ RH   FP+W +  + +LRE+GE  D+LYS+ALGP    R+YS
Sbjct: 599 EHLSLINTRGEDVLDLFRRHQLEFPNWFRTHMYSLRERGEASDNLYSIALGPINEVRTYS 658

Query: 246 GCIVNGLRFHNIERDSRRTTQNSEVMVCGE-EEDDMNFYVVLSDIWELDYAKGRRVIIFK 305
           GC VNGLRFH+IERD+RRTTQNS +M  GE + D+ N+Y VL ++ +L+Y K RRV +FK
Sbjct: 659 GCFVNGLRFHSIERDNRRTTQNSGIMAYGETKADETNYYGVLQEVLDLEYLKCRRVCLFK 718

Query: 306 CKWFDTYSEKNRIRVDLGFKSINTSKYWET 335
           C WFDT  +KN+ R DLGFK INTS++W T
Sbjct: 719 CNWFDTDVKKNKFRCDLGFKIINTSRFWYT 748

[Close]
BLAST of Moc10g11600.1 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 5.8e-06
Identity = 28/64 (43.75%), Postives = 36/64 (56.25%), Query Frame = 0 

Query: 516 RHCHIIETGLTLLVQTSMPLCYWWEAFRTPTLLINELPSSVLCGKLPLESVLHKQLNYLD 575
           +H HI+ETGLTLL   S+P  YW  AF     LIN LP+ +L  + P + +     NY  
Sbjct: 628 KHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDK 687

Query: 576 LRPF 580
           LR F
Sbjct: 688 LRVF 691

[Close]
BLAST of Moc10g11600.1 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 4.9e-05
Identity = 33/97 (34.02%), Postives = 48/97 (49.48%), Query Frame = 0 

Query: 516 RHCHIIETGLTLLVQTSMPLCYWWEAFRTPTLLINELPSSVLCGKLPLESVLHKQLNYLD 575
           +H HI+E GLTLL   S+P  YW  AF     LIN LP+ +L  + P + +  +  NY  
Sbjct: 607 KHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEK 666

Query: 576 -----------LRPFSLHEYHSNSTSSS-ASYSLSQT 601
                      LRP++ H+    S   +   YSL+Q+
Sbjct: 667 LKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQS 703

[Close]
BLAST of Moc10g11600.1 vs. ExPASy TrEMBL
Match: A0A6J1DWT9 (uncharacterized protein LOC111025149 OS=Momordica charantia OX=3673 GN=LOC111025149 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 4.0e-50
Identity = 114/176 (64.77%), Postives = 132/176 (75.00%), Query Frame = 0 

Query: 1   MTSDKELFKDPDKSFKSRVKIGNGEYLEVK-------ESCAGTKLISEVLFIPEIDQNLL 60
           M SDKELFKD D+SFKSRVKIGNGEYLEVK       ESC GTKLI+EVLF+P I QNLL
Sbjct: 273 MXSDKELFKDLDRSFKSRVKIGNGEYLEVKGKXTXSIESCVGTKLITEVLFVPXIAQNLL 332

Query: 61  SVGQLVDQRFKVLFEDEKCLISDSSGNELFKIKMQHKSFSLDPFKKEQIAFKCQVNDTKL 120
           SVGQLV++ FKVLFE EKCLISDS+GNE FKIKMQHKSFSLDP +K+QI  KCQVNDT+L
Sbjct: 333 SVGQLVEKGFKVLFEYEKCLISDSNGNEWFKIKMQHKSFSLDPVEKDQIVSKCQVNDTEL 392

Query: 121 WHKRLGHFHHKGLQYLQKNDWSNNWNNKLFDMLLELLNEALTIVASIPSTSYEAKR 170
            HKRLGHFH +GLQY Q+N+ +      +   +LE L     +V     T Y ++R
Sbjct: 393 RHKRLGHFHQRGLQYQQENEMT------IGVPILEELKTNCGVVRIDTGTEYTSQR 442

[Close]
BLAST of Moc10g11600.1 vs. ExPASy TrEMBL
Match: A0A5A7TNI4 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold588G00270 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 5.1e-45
Identity = 99/132 (75.00%), Postives = 112/132 (84.85%), Query Frame = 0 

Query: 1   MTSDKELFKDPDKSFKSRVKIGNGEYLEVK-------ESCAGTKLISEVLFIPEIDQNLL 60
           MTSDKELFKD D SFKS+VKIGNG YLEVK       +SCAGTKLI++VLFI EIDQNLL
Sbjct: 1   MTSDKELFKDLDISFKSKVKIGNGAYLEVKGKGTVSTDSCAGTKLITKVLFISEIDQNLL 60

Query: 61  SVGQLVDQRFKVLFEDEKCLISDSSGNELFKIKMQHKSFSLDPFKKEQIAFKCQVNDTKL 120
           +VGQLV++ FKVLFE+ KCLISDS+GNELFKI MQHKSFSL+  ++EQ+AFKCQVNDTK 
Sbjct: 61  NVGQLVEKEFKVLFEEGKCLISDSNGNELFKINMQHKSFSLNLLEEEQVAFKCQVNDTKF 120

Query: 121 WHKRLGHFHHKG 126
           WHKRLG F  KG
Sbjct: 121 WHKRLGIFISKG 132

[Close]
BLAST of Moc10g11600.1 vs. ExPASy TrEMBL
Match: A0A5D3BE46 (Putative transposon Ty5-1 protein YCL075W family OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold222G00220 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.1e-44
Identity = 99/132 (75.00%), Postives = 111/132 (84.09%), Query Frame = 0 

Query: 1   MTSDKELFKDPDKSFKSRVKIGNGEYLEVK-------ESCAGTKLISEVLFIPEIDQNLL 60
           MTSDKELFKD D SFKSRVKIGN  YLEVK       +SCAGTKLI++VLFIPEIDQNLL
Sbjct: 151 MTSDKELFKDLDISFKSRVKIGNSAYLEVKGKGTVSTDSCAGTKLITKVLFIPEIDQNLL 210

Query: 61  SVGQLVDQRFKVLFEDEKCLISDSSGNELFKIKMQHKSFSLDPFKKEQIAFKCQVNDTKL 120
           +VGQLV++ FKVLFE+ KCLISDS+GNELFKI MQ KSFSL+  ++EQ+AFKCQVNDTK 
Sbjct: 211 NVGQLVEKEFKVLFEEGKCLISDSNGNELFKINMQRKSFSLNLLEEEQVAFKCQVNDTKF 270

Query: 121 WHKRLGHFHHKG 126
           WHKRLG F  KG
Sbjct: 271 WHKRLGIFISKG 282

[Close]
BLAST of Moc10g11600.1 vs. ExPASy TrEMBL
Match: A0A5A7TRX4 (DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G001040 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.8e-42
Identity = 85/150 (56.67%), Postives = 111/150 (74.00%), Query Frame = 0 

Query: 186 QHLSLIRILGDNVSILYERHSTPFPDWLKKKVLTLREQGELDDDLYSLALGPSLTTRSYS 245
           +HLSLI   G++V  L+ RH   FP+W +  + +LRE+GE  DDLYS+ALGP    R+YS
Sbjct: 432 EHLSLINTRGEDVLDLFRRHQLEFPNWFRTHMYSLRERGEASDDLYSIALGPINEVRTYS 491

Query: 246 GCIVNGLRFHNIERDSRRTTQNSEVMVCGE-EEDDMNFYVVLSDIWELDYAKGRRVIIFK 305
           GC VNGLRFH+IERD+RRTTQNS +M  GE + D+ N+Y VL ++ +L+Y K RRV +FK
Sbjct: 492 GCFVNGLRFHSIERDNRRTTQNSGIMAYGETKADETNYYGVLQEVLDLEYLKCRRVCLFK 551

Query: 306 CKWFDTYSEKNRIRVDLGFKSINTSKYWET 335
           C WFDT  +KN+ R DLGFK INTS++W T
Sbjct: 552 CNWFDTDVKKNKFRCDLGFKIINTSRFWYT 581

[Close]
BLAST of Moc10g11600.1 vs. ExPASy TrEMBL
Match: A0A5A7T9T1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G003190 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 6.8e-42
Identity = 84/150 (56.00%), Postives = 111/150 (74.00%), Query Frame = 0 

Query: 186 QHLSLIRILGDNVSILYERHSTPFPDWLKKKVLTLREQGELDDDLYSLALGPSLTTRSYS 245
           +HLSLI   G++V  L+ RH   FP+W +  + +LRE+GE  D+LYS+ALGP    R+YS
Sbjct: 599 EHLSLINTRGEDVLDLFRRHQLEFPNWFRTHMYSLRERGEASDNLYSIALGPINEVRTYS 658

Query: 246 GCIVNGLRFHNIERDSRRTTQNSEVMVCGE-EEDDMNFYVVLSDIWELDYAKGRRVIIFK 305
           GC VNGLRFH+IERD+RRTTQNS +M  GE + D+ N+Y VL ++ +L+Y K RRV +FK
Sbjct: 659 GCFVNGLRFHSIERDNRRTTQNSGIMAYGETKADETNYYGVLQEVLDLEYLKCRRVCLFK 718

Query: 306 CKWFDTYSEKNRIRVDLGFKSINTSKYWET 335
           C WFDT  +KN+ R DLGFK INTS++W T
Sbjct: 719 CNWFDTDVKKNKFRCDLGFKIINTSRFWYT 748

The following BLAST results are available for this feature:
BLAST of Moc10g11600.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022158688.18.3e-5064.77uncharacterized protein LOC111025149 [Momordica charantia][more]
KAA0043367.11.0e-4475.00Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
TYJ98110.12.3e-4475.00putative transposon Ty5-1 protein YCL075W family [Cucumis melo var. makuwa][more]
KAA0045598.13.7e-4256.67uncharacterized protein E6C27_scaffold243G001040 [Cucumis melo var. makuwa][more]
KAA0038099.11.4e-4156.00uncharacterized protein E6C27_scaffold36G003190 [Cucumis melo var. makuwa][more]

Pages

BLAST of Moc10g11600.1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q94HW25.8e-0643.75Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT944.9e-0534.02Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
BLAST of Moc10g11600.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DWT94.0e-5064.77uncharacterized protein LOC111025149 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A5A7TNI45.1e-4575.00Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5D3BE461.1e-4475.00Putative transposon Ty5-1 protein YCL075W family OS=Cucumis melo var. makuwa OX=... [more]
A0A5A7TRX41.8e-4256.67DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5A7T9T16.8e-4256.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]

Pages

BLAST of Moc10g11600.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025312Domain of unknown function DUF4216PFAMPF13952DUF4216coord: 290..334
e-value: 1.3E-8
score: 35.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 603..624
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 606..621
NoneNo IPR availablePANTHERPTHR34222:SF31SUBFAMILY NOT NAMEDcoord: 1..97
NoneNo IPR availablePANTHERPTHR34222FAMILY NOT NAMEDcoord: 1..97

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Moc10g11600Moc10g11600gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Moc10g11600.1.exon1Moc10g11600.1.exon1exon
Moc10g11600.1.exon2Moc10g11600.1.exon2exon
Moc10g11600.1.exon3Moc10g11600.1.exon3exon
Moc10g11600.1.exon4Moc10g11600.1.exon4exon
Moc10g11600.1.exon5Moc10g11600.1.exon5exon
Moc10g11600.1.exon6Moc10g11600.1.exon6exon
Moc10g11600.1.exon7Moc10g11600.1.exon7exon
Moc10g11600.1.exon8Moc10g11600.1.exon8exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Moc10g11600.1cds.Moc10g11600.1CDS
cds.Moc10g11600.1cds.Moc10g11600.1_2CDS
cds.Moc10g11600.1cds.Moc10g11600.1_3CDS
cds.Moc10g11600.1cds.Moc10g11600.1_4CDS
cds.Moc10g11600.1cds.Moc10g11600.1_5CDS
cds.Moc10g11600.1cds.Moc10g11600.1_6CDS
cds.Moc10g11600.1cds.Moc10g11600.1_7CDS
cds.Moc10g11600.1cds.Moc10g11600.1_8CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Moc10g11600.1Moc10g11600.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044237 cellular metabolic process
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding