Moc10g05980.1 (mRNA) Bitter gourd (OHB3-1) v2

Overview
NameMoc10g05980.1
TypemRNA
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Locationchr10: 4300895 .. 4303657 (-)
Sequence length1713
RNA-Seq ExpressionMoc10g05980.1
SyntenyMoc10g05980.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACATCCTCATCGTCAAATCCAGATGCTGTGAATTCTTCACAAATAAACAAAATAGTAAATCCAGGGAGCAAAATCTCAACTGTCAAATTAAATGATGAGAATTTTTTGCTATGGAAACTCTAGATCTCAACAGCGCTTCAAGGGCACGATCTTGAACATCATATTACAGGGAAATCTGAAATTCCTCCTCAGATTATTTCGATTACTGGTGAGAATTCTTCCTCCACATTGACAGTAAATCCAAAGTATCATCAATGGATGAAGCAGGACAAATTGATTACCTCTTGGTTATTCAGCTCCATGTTCGAAGAAATTTTGGGAGAGATGATTCATTGCAACACTGCCAGAGAAGTTTGGCAGATTCTTGAAAACCTATACACATCAAGAAACCTTGCAAGAGTTATGCAACTCAAATCGAAGCTAGAAAACATCAAGAAAGGTAACCTACCTTTAAAAGATTACTTTCAAAAAGTAAAAGCGCTTGTTGATTCACTTGCTGCGGCTGGAAAAAAGGTTACTGTTGAAGATCATATTATGCATATCTTGACGGGTCTGAGAAGTGAATTTGAATCGACGGTTTCGGTTATCTCTGCGAGAACACAAACCCAGACACTTCAAGAAGTTTATTCTCTCCTTCTCTCACATGAAGGGCGTAATGAGAGGAATTCGATTAACACTGATGGTACCCTACCATCTGTTAATCTTACCCAGCAAACAAAGAATTCCAATTCTGCTCAAAGCATCGATGGTCAGCGTCCTTATATGCAGAATAACAGAAGCAAAAACAGTGGCAACCCTAATTTTAGAAGAAATTGGAATAGCAATAATCGTCCCCAATGTCAGATCTATGGCAAATTTGGGCATACTGCATTGAGATGCTATCTTCGGTTTGAGAAAACATTCTTGGGGCCAAATGGACAATCACATATGCAACATAAATTTTCTGGTGGATCTAATTCCAGCATAAATTCGAACATGACAGCATTTGGGAATCAACAACAGGCCTTCACCAATGGATTTCAGCCTAACTCAAATTCTCATATGGCTGCCTTTTTAGCTCAACAGGATTTTAATCGGGATACCAATTGGTACCCAGATTCAGGTGCAACAAATCATGTTACAAGTAATTTCAACAATCTGGCCACCAGCACAGAATACACGGGTGACAATCAAGTTCGGATTGGGAATGGTACAGGTTTGCAAGTACTTCACACTGGTTCATCTTTTGTAACTTCATCTAACTCTCTTCACTCTCCCAATACTAAACCTGTTTTTATCTTAGATAATCTACTCCATGTCCCCAATATCACAAAGAACCTCATAAGTGTCAGTCAATTTGCTCGTGATAACTCTGTATTCTTTGAATTTCACCCTTACCATTGCTTTGTGAAGGACCTTCAAACTGGCCACATTTTACTCCAAGGGAAGGTACATGATGGTCTATATCGATTTGAGTTGGAGAAGGCTGCTCCCACGTCCTCTGACAGAACTGCATCTGGTGTGTCTGTTGTCTCCTCCTCTAGTGTCAATACTCTTACACACAAAACATCTTTATCTCATGATTCTTTCTCTTTACCAATTAATTGTAATCTGTCTTTGTTTGATGTTTGGCATAGGCGATTAGGCCATGCTGCTCCAAATGTTGTTCATTCAATTCTTCGTTCATGTAATGTACCCATCCAAAATAAATCAAAATTCTATATGTCATGCTTGTGCTACTAGCAAATGTCATAGTCTTCCCTTTGTTGATTCAAATACTGTCTATTCTTCTCCACTTTCATTAGTAGTTGCTGATCTCTGGGGTCCTGCCTTTGTTTCATCCAGAAATGGGTTTAAATACTACATAAGTTTTGTGATGTTCATTCTCGATATACATGGATTTATTTCCTTACAACAAAATCCGAAGCTTTTAAAGCCATTACACTTTTCAAAGCACAAGCTGAAAAATCCTTGAATTGTTCTATTCGTCGCCTTCAAACTGATGGTGGGGGTGAGTTTTCTTCGTTTATTCCTTTTCTGAAATCCCATGGTATAGAACATAGAGTTTCTTGTCCATATACATCACAACAAAATGGCATCGTTGAGAGGAAACATAGGCATATTGTAGATACGGGTCTCACCATTCTTTCTCAAGCATCTATGCCTCTTACTTTTTGGGATGACGCCTTCTCCACGGCTGTGTATTTGATCAATCGCCTTCCTACCTCTGTTCTTTATGGTACCTCCCCAATTGAAACTCTCTTTGGTTTCCAACCTCACTACTTGTTTCTAAAAACGTTTGGATGCCTCTGTTTCCCATCCTTACGCTTATATAATCAACATAAAATTCAACCTCGCTCCTCTGCTTGTCTTTTCATTGGCTATAGTAATATTCACCATGGTTATAAATGTTTGTCACCTTCTGGTCGTTTATACATATCGCGTCATGTTTTATTTGACGAAACTGTTTTCCCGTATCTGCAGTTATTTCAAAAACCAACCTCTCATTCTTCTAGCCCTACAATCCAAACCACACTCCCTATTATATCACCAACTCCTTCATCACCATCACCTCAGCGTGACACTTCAGTTGTTCGTGACCCATCTGAATCTTGTGAATCTTCCCCTGATATTCATGTTGCATTGCCTGTCAATAATTATGAAAATGTACCTGCTGCAATACCTACTAATGACTTTGATGAAAATTCTAGTACCACTTTACCTACTGGTGTTGCTTCAACTTCTCAAGCAGTTTTCAAATTCAAATGTTCAGTCCACTGA

mRNA sequence

ATGACATCCTCATCGTCAAATCCAGATGCTATCTCAACAGCGCTTCAAGGGCACGATCTTGAACATCATATTACAGGGAAATCTGAAATTCCTCCTCAGATTATTTCGATTACTGGTGAGAATTCTTCCTCCACATTGACAGTAAATCCAAAGTATCATCAATGGATGAAGCAGGACAAATTGATTACCTCTTGGTTATTCAGCTCCATGTTCGAAGAAATTTTGGGAGAGATGATTCATTGCAACACTGCCAGAGAAGTTTGGCAGATTCTTGAAAACCTATACACATCAAGAAACCTTGCAAGAGTTATGCAACTCAAATCGAAGCTAGAAAACATCAAGAAAGGTAACCTACCTTTAAAAGATTACTTTCAAAAAGTAAAAGCGCTTGTTGATTCACTTGCTGCGGCTGGAAAAAAGGTTACTGTTGAAGATCATATTATGCATATCTTGACGGGTCTGAGAAGTGAATTTGAATCGACGGTTTCGGTTATCTCTGCGAGAACACAAACCCAGACACTTCAAGAAGTTTATTCTCTCCTTCTCTCACATGAAGGGCGTAATGAGAGGAATTCGATTAACACTGATGGTACCCTACCATCTGTTAATCTTACCCAGCAAACAAAGAATTCCAATTCTGCTCAAAGCATCGATGGTCAGCGTCCTTATATGCAGAATAACAGAAGCAAAAACAGTGGCAACCCTAATTTTAGAAGAAATTGGAATAGCAATAATCGTCCCCAATGTCAGATCTATGGCAAATTTGGGCATACTGCATTGAGATGCTATCTTCGGTTTGAGAAAACATTCTTGGGGCCAAATGGACAATCACATATGCAACATAAATTTTCTGGTGGATCTAATTCCAGCATAAATTCGAACATGACAGCATTTGGGAATCAACAACAGGCCTTCACCAATGGATTTCAGCCTAACTCAAATTCTCATATGGCTGCCTTTTTAGCTCAACAGGATTTTAATCGGGATACCAATTGGTACCCAGATTCAGGTGCAACAAATCATGTTACAAGTAATTTCAACAATCTGGCCACCAGCACAGAATACACGGGTGACAATCAAGTTCGGATTGGGAATGGTACAGGTTTGCAAGTACTTCACACTGGTTCATCTTTTGTAACTTCATCTAACTCTCTTCACTCTCCCAATACTAAACCTGTTTTTATCTTAGATAATCTACTCCATGTCCCCAATATCACAAAGAACCTCATAAGTGTCAGTCAATTTGCTCGTGATAACTCTGTATTCTTTGAATTTCACCCTTACCATTGCTTTGTGAAGGACCTTCAAACTGGCCACATTTTACTCCAAGGGAAGGTACATGATGGTCTATATCGATTTGAGTTGGAGAAGGCTGCTCCCACGTCCTCTGACAGAACTGCATCTGGTGTGTCTGTTTTATTTCAAAAACCAACCTCTCATTCTTCTAGCCCTACAATCCAAACCACACTCCCTATTATATCACCAACTCCTTCATCACCATCACCTCAGCGTGACACTTCAGTTGTTCGTGACCCATCTGAATCTTGTGAATCTTCCCCTGATATTCATGTTGCATTGCCTGTCAATAATTATGAAAATGTACCTGCTGCAATACCTACTAATGACTTTGATGAAAATTCTAGTACCACTTTACCTACTGGTGTTGCTTCAACTTCTCAAGCAGTTTTCAAATTCAAATGTTCAGTCCACTGA

Coding sequence (CDS)

ATGACATCCTCATCGTCAAATCCAGATGCTATCTCAACAGCGCTTCAAGGGCACGATCTTGAACATCATATTACAGGGAAATCTGAAATTCCTCCTCAGATTATTTCGATTACTGGTGAGAATTCTTCCTCCACATTGACAGTAAATCCAAAGTATCATCAATGGATGAAGCAGGACAAATTGATTACCTCTTGGTTATTCAGCTCCATGTTCGAAGAAATTTTGGGAGAGATGATTCATTGCAACACTGCCAGAGAAGTTTGGCAGATTCTTGAAAACCTATACACATCAAGAAACCTTGCAAGAGTTATGCAACTCAAATCGAAGCTAGAAAACATCAAGAAAGGTAACCTACCTTTAAAAGATTACTTTCAAAAAGTAAAAGCGCTTGTTGATTCACTTGCTGCGGCTGGAAAAAAGGTTACTGTTGAAGATCATATTATGCATATCTTGACGGGTCTGAGAAGTGAATTTGAATCGACGGTTTCGGTTATCTCTGCGAGAACACAAACCCAGACACTTCAAGAAGTTTATTCTCTCCTTCTCTCACATGAAGGGCGTAATGAGAGGAATTCGATTAACACTGATGGTACCCTACCATCTGTTAATCTTACCCAGCAAACAAAGAATTCCAATTCTGCTCAAAGCATCGATGGTCAGCGTCCTTATATGCAGAATAACAGAAGCAAAAACAGTGGCAACCCTAATTTTAGAAGAAATTGGAATAGCAATAATCGTCCCCAATGTCAGATCTATGGCAAATTTGGGCATACTGCATTGAGATGCTATCTTCGGTTTGAGAAAACATTCTTGGGGCCAAATGGACAATCACATATGCAACATAAATTTTCTGGTGGATCTAATTCCAGCATAAATTCGAACATGACAGCATTTGGGAATCAACAACAGGCCTTCACCAATGGATTTCAGCCTAACTCAAATTCTCATATGGCTGCCTTTTTAGCTCAACAGGATTTTAATCGGGATACCAATTGGTACCCAGATTCAGGTGCAACAAATCATGTTACAAGTAATTTCAACAATCTGGCCACCAGCACAGAATACACGGGTGACAATCAAGTTCGGATTGGGAATGGTACAGGTTTGCAAGTACTTCACACTGGTTCATCTTTTGTAACTTCATCTAACTCTCTTCACTCTCCCAATACTAAACCTGTTTTTATCTTAGATAATCTACTCCATGTCCCCAATATCACAAAGAACCTCATAAGTGTCAGTCAATTTGCTCGTGATAACTCTGTATTCTTTGAATTTCACCCTTACCATTGCTTTGTGAAGGACCTTCAAACTGGCCACATTTTACTCCAAGGGAAGGTACATGATGGTCTATATCGATTTGAGTTGGAGAAGGCTGCTCCCACGTCCTCTGACAGAACTGCATCTGGTGTGTCTGTTTTATTTCAAAAACCAACCTCTCATTCTTCTAGCCCTACAATCCAAACCACACTCCCTATTATATCACCAACTCCTTCATCACCATCACCTCAGCGTGACACTTCAGTTGTTCGTGACCCATCTGAATCTTGTGAATCTTCCCCTGATATTCATGTTGCATTGCCTGTCAATAATTATGAAAATGTACCTGCTGCAATACCTACTAATGACTTTGATGAAAATTCTAGTACCACTTTACCTACTGGTGTTGCTTCAACTTCTCAAGCAGTTTTCAAATTCAAATGTTCAGTCCACTGA

Protein sequence

MTSSSSNPDAISTALQGHDLEHHITGKSEIPPQIISITGENSSSTLTVNPKYHQWMKQDKLITSWLFSSMFEEILGEMIHCNTAREVWQILENLYTSRNLARVMQLKSKLENIKKGNLPLKDYFQKVKALVDSLAAAGKKVTVEDHIMHILTGLRSEFESTVSVISARTQTQTLQEVYSLLLSHEGRNERNSINTDGTLPSVNLTQQTKNSNSAQSIDGQRPYMQNNRSKNSGNPNFRRNWNSNNRPQCQIYGKFGHTALRCYLRFEKTFLGPNGQSHMQHKFSGGSNSSINSNMTAFGNQQQAFTNGFQPNSNSHMAAFLAQQDFNRDTNWYPDSGATNHVTSNFNNLATSTEYTGDNQVRIGNGTGLQVLHTGSSFVTSSNSLHSPNTKPVFILDNLLHVPNITKNLISVSQFARDNSVFFEFHPYHCFVKDLQTGHILLQGKVHDGLYRFELEKAAPTSSDRTASGVSVLFQKPTSHSSSPTIQTTLPIISPTPSSPSPQRDTSVVRDPSESCESSPDIHVALPVNNYENVPAAIPTNDFDENSSTTLPTGVASTSQAVFKFKCSVH
Homology
BLAST of Moc10g05980.1 vs. NCBI nr
Match: XP_022136882.1 (dr1-associated corepressor homolog isoform X1 [Momordica charantia])

HSP 1 Score: 615.1 bits (1585), Expect = 5.9e-172
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0

Query: 56  MKQDKLITSWLFSSMFEEILGEMIHCNTAREVWQILENLYTSRNLARVMQLKSKLENIKK 115
           MKQDKLITSWLFSSMFEEILGEMIHCNTAREVWQILENLYTSRNLARVMQLKSKLENIKK
Sbjct: 1   MKQDKLITSWLFSSMFEEILGEMIHCNTAREVWQILENLYTSRNLARVMQLKSKLENIKK 60

Query: 116 GNLPLKDYFQKVKALVDSLAAAGKKVTVEDHIMHILTGLRSEFESTVSVISARTQTQTLQ 175
           GNLPLKDYFQKVKALVDSLAAAGKKVTVEDHIMHILTGLRSEFESTVSVISARTQTQTLQ
Sbjct: 61  GNLPLKDYFQKVKALVDSLAAAGKKVTVEDHIMHILTGLRSEFESTVSVISARTQTQTLQ 120

Query: 176 EVYSLLLSHEGRNERNSINTDGTLPSVNLTQQTKNSNSAQSIDGQRPYMQNNRSKNSGNP 235
           EVYSLLLSHEGRNERNSINTDGTLPSVNLTQQTKNSNSAQSIDGQRPYMQNNRSKNSGNP
Sbjct: 121 EVYSLLLSHEGRNERNSINTDGTLPSVNLTQQTKNSNSAQSIDGQRPYMQNNRSKNSGNP 180

Query: 236 NFRRNWNSNNRPQCQIYGKFGHTALRCYLRFEKTFLGPNGQSHMQHKFSGGSNSSINSNM 295
           NFRRNWNSNNRPQCQIYGKFGHTALRCYLRFEKTFLGPNGQSHMQHKFSGGSNSSINSNM
Sbjct: 181 NFRRNWNSNNRPQCQIYGKFGHTALRCYLRFEKTFLGPNGQSHMQHKFSGGSNSSINSNM 240

Query: 296 TAFGNQQQAFTNGFQPNSNSHMAAFLAQQDFNRDTNWYPDSGATNHVTSNFNNLATSTEY 355
           TAFGNQQQAFTNGFQPNSNSHMAAFLAQQDFNRDTNWYPDSGATNHVTSNFNNLATSTEY
Sbjct: 241 TAFGNQQQAFTNGFQPNSNSHMAAFLAQQDFNRDTNWYPDSGATNHVTSNFNNLATSTEY 300

Query: 356 TGDNQVRIGNGTG 369
           TGDNQVRIGNGTG
Sbjct: 301 TGDNQVRIGNGTG 313

BLAST of Moc10g05980.1 vs. NCBI nr
Match: XP_022136883.1 (dr1-associated corepressor homolog isoform X2 [Momordica charantia])

HSP 1 Score: 611.3 bits (1575), Expect = 8.5e-171
Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0

Query: 56  MKQDKLITSWLFSSMFEEILGEMIHCNTAREVWQILENLYTSRNLARVMQLKSKLENIKK 115
           MKQDKLITSWLFSSMFEEILGEMIHCNTAREVWQILENLYTSRNLARVMQLKSKLENIKK
Sbjct: 1   MKQDKLITSWLFSSMFEEILGEMIHCNTAREVWQILENLYTSRNLARVMQLKSKLENIKK 60

Query: 116 GNLPLKDYFQKVKALVDSLAAAGKKVTVEDHIMHILTGLRSEFESTVSVISARTQTQTLQ 175
           GNLPLKDYFQKVKALVDSLAAAGKKVTVEDHIMHILTGLRSEFESTVSVISARTQTQTLQ
Sbjct: 61  GNLPLKDYFQKVKALVDSLAAAGKKVTVEDHIMHILTGLRSEFESTVSVISARTQTQTLQ 120

Query: 176 EVYSLLLSHEGRNERNSINTDGTLPSVNLTQQTKNSNSAQSIDGQRPYMQNNRSKNSGNP 235
           EVYSLLLSHEGRNERNSINTDGTLPSVNLTQQTKNSNSAQSIDGQRPYMQNNRSKNSGNP
Sbjct: 121 EVYSLLLSHEGRNERNSINTDGTLPSVNLTQQTKNSNSAQSIDGQRPYMQNNRSKNSGNP 180

Query: 236 NFRRNWNSNNRPQCQIYGKFGHTALRCYLRFEKTFLGPNGQSHMQHKFSGGSNSSINSNM 295
           NFRRNWNSNNRPQCQIYGKFGHTALRCYLRFEKTFLGPNGQSHMQHKFSGGSNSSINSNM
Sbjct: 181 NFRRNWNSNNRPQCQIYGKFGHTALRCYLRFEKTFLGPNGQSHMQHKFSGGSNSSINSNM 240

Query: 296 TAFGNQQQAFTNGFQPNSNSHMAAFLAQQDFNRDTNWYPDSGATNHVTSNFNNLATSTEY 355
           TAFGNQQQAFTNGFQPNSNSHMAAFLAQQDFNRDTNWYPDSGATNHVTSNFNNLATSTEY
Sbjct: 241 TAFGNQQQAFTNGFQPNSNSHMAAFLAQQDFNRDTNWYPDSGATNHVTSNFNNLATSTEY 300

Query: 356 TGDNQVRIGNG 367
           TGDNQVRIGNG
Sbjct: 301 TGDNQVRIGNG 311

BLAST of Moc10g05980.1 vs. NCBI nr
Match: KAA0048297.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 360.5 bits (924), Expect = 2.6e-95
Identity = 209/453 (46.14%), Postives = 290/453 (64.02%), Query Frame = 0

Query: 11  ISTALQGHDLEHHITGKSEIPPQ-IISITGENSSSTLTVNPKYHQWMKQDKLITSWLFSS 70
           I TAL+ +DLE+ +  +SE P + +IS    ++S+T T NP Y  W +QD+LI+SWL  S
Sbjct: 46  ILTALEAYDLENFLESESEPPSKYLISTESSSASATGTPNPAYKVWKRQDRLISSWLLGS 105

Query: 71  MFEEILGEMIHCNTAREVWQILENLYTSRNLARVMQLKSKLENIKKGNLPLKDYFQKVKA 130
           M EEIL +M+HC +A+E+W+ L+ +++SR LA+ MQ K+KL NIKKG++PLK+YF K+  
Sbjct: 106 MSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQ 165

Query: 131 LVDSLAAAGKKVTVEDHIMHILTGLRSEFESTVSVISARTQTQTLQEVYSLLLSHEGRNE 190
            VD+LA+  K V+ +DHI++IL GL S+++S +SVISART + ++QEV SLLL+ E +NE
Sbjct: 166 CVDALASINKPVSSDDHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNE 225

Query: 191 RNSINTDGTLPSVNLTQQTKNSNSAQSIDGQRPYMQNNRSKNS----GNPNFRRNWNSN- 250
              I ++  LPSVN+  QT    +   I   +    NN S N     GN    R    N 
Sbjct: 226 SKLI-SETALPSVNIVTQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGRRGNR 285

Query: 251 NRPQCQIYGKFGHTALRCYLRFEKTFLGPNGQSHMQHKFSGGSNSSINSNMTAFGNQQQA 310
           N+PQCQI  K G++A RC+ R+                 S  S  S NS+ T++ N    
Sbjct: 286 NKPQCQICAKLGYSADRCFFRYTPR--------------SNSSGYSPNSHNTSYTNM--- 345

Query: 311 FTNGFQPNSNSHMAAFLAQQDFNRDTNWYPDSGATNHVTSNFNNLATSTEYTGDNQVRIG 370
                  N++  M+A +A  D N D+NWYPDSGATNH+T + +NL+  +EY G NQ+   
Sbjct: 346 -------NNHPQMSAMVAALDLNIDSNWYPDSGATNHLTHSLSNLSIGSEYGGGNQIYAA 405

Query: 371 NGTGLQVLHTGS-SFVTSSNSLHSPNTKPVFILDNLLHVPNITKNLISVSQFARDNSVFF 430
           NG+GL + H GS SF +S+    S      F L+NLL VP+ITKNLISVSQFA+DN VFF
Sbjct: 406 NGSGLPITHYGSMSFNSSTLPFKS------FTLNNLLQVPSITKNLISVSQFAKDNHVFF 465

Query: 431 EFHPYHCFVKDLQTGHILLQGKVHDGLYRFELE 457
           EFHP  C+VKDL TG +LLQG ++DGLY+F +E
Sbjct: 466 EFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIE 467

BLAST of Moc10g05980.1 vs. NCBI nr
Match: TYK10642.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 360.5 bits (924), Expect = 2.6e-95
Identity = 209/453 (46.14%), Postives = 290/453 (64.02%), Query Frame = 0

Query: 11  ISTALQGHDLEHHITGKSEIPPQ-IISITGENSSSTLTVNPKYHQWMKQDKLITSWLFSS 70
           I TAL+ +DLE+ +  +SE P + +IS    ++S+T T NP Y  W +QD+LI+SWL  S
Sbjct: 46  ILTALEAYDLENFLESESEPPSKYLISTESSSASATGTPNPAYKVWKRQDRLISSWLLGS 105

Query: 71  MFEEILGEMIHCNTAREVWQILENLYTSRNLARVMQLKSKLENIKKGNLPLKDYFQKVKA 130
           M EEIL +M+HC +A+E+W+ L+ +++SR LA+ MQ K+KL NIKKG++PLK+YF K+  
Sbjct: 106 MSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQ 165

Query: 131 LVDSLAAAGKKVTVEDHIMHILTGLRSEFESTVSVISARTQTQTLQEVYSLLLSHEGRNE 190
            VD+LA+  K V+ +DHI++IL GL S+++S +SVISART + ++QEV SLLL+ E +NE
Sbjct: 166 CVDALASINKPVSSDDHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNE 225

Query: 191 RNSINTDGTLPSVNLTQQTKNSNSAQSIDGQRPYMQNNRSKNS----GNPNFRRNWNSN- 250
              I ++  LPSVN+  QT    +   I   +    NN S N     GN    R    N 
Sbjct: 226 SKLI-SETALPSVNIVTQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGRRGNR 285

Query: 251 NRPQCQIYGKFGHTALRCYLRFEKTFLGPNGQSHMQHKFSGGSNSSINSNMTAFGNQQQA 310
           N+PQCQI  K G++A RC+ R+                 S  S  S NS+ T++ N    
Sbjct: 286 NKPQCQICAKLGYSADRCFFRYTPR--------------SNSSGYSPNSHNTSYTNM--- 345

Query: 311 FTNGFQPNSNSHMAAFLAQQDFNRDTNWYPDSGATNHVTSNFNNLATSTEYTGDNQVRIG 370
                  N++  M+A +A  D N D+NWYPDSGATNH+T + +NL+  +EY G NQ+   
Sbjct: 346 -------NNHPQMSAMVAALDLNIDSNWYPDSGATNHLTHSLSNLSIGSEYGGGNQIYAA 405

Query: 371 NGTGLQVLHTGS-SFVTSSNSLHSPNTKPVFILDNLLHVPNITKNLISVSQFARDNSVFF 430
           NG+GL + H GS SF +S+    S      F L+NLL VP+ITKNLISVSQFA+DN VFF
Sbjct: 406 NGSGLPITHYGSMSFNSSTLPFKS------FTLNNLLQVPSITKNLISVSQFAKDNHVFF 465

Query: 431 EFHPYHCFVKDLQTGHILLQGKVHDGLYRFELE 457
           EFHP  C+VKDL TG +LLQG ++DGLY+F +E
Sbjct: 466 EFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIE 467

BLAST of Moc10g05980.1 vs. NCBI nr
Match: XP_022154487.1 (uncharacterized protein LOC111021757 [Momordica charantia])

HSP 1 Score: 357.8 bits (917), Expect = 1.7e-94
Identity = 208/382 (54.45%), Postives = 254/382 (66.49%), Query Frame = 0

Query: 11  ISTALQGHDLEHHITGKSEIPPQIISIT-GENSSSTLTVNPKYHQWMKQDKLITSWLFSS 70
           I TALQG+ LE +I    + P Q +  T  E+SSS+L  NP Y +W+KQDKLI++WL  S
Sbjct: 45  IRTALQGNGLESYIDSNEDTPAQFVQTTEDESSSSSLQQNPAYFEWIKQDKLISAWLLGS 104

Query: 71  MFEEILGEMIHCNTAREVWQILENLYTSRNLARVMQLKSKLENIKKGNLPLKDYFQKVKA 130
           M E+IL +M+ C +ARE+W +LE ++ SR LARVMQLK KLEN KKGNL LKDYF K+K 
Sbjct: 105 MNEDILSQMLDCKSAREIWTVLECMFASRTLARVMQLKLKLENFKKGNLSLKDYFLKIKN 164

Query: 131 LVDSLAAAGKKVTVEDHIMHILTGLRSEFESTVSVISARTQTQTLQEVYSLLLSHEGRNE 190
           LVDSLA AGKK++ EDHIMHIL GL  EF++ +SVI+AR   QTLQEV SLLL  EGRNE
Sbjct: 165 LVDSLAIAGKKLSTEDHIMHILAGLGPEFDAIISVITARNMPQTLQEVCSLLLQQEGRNE 224

Query: 191 RNSINTDGTLPSVNLT----------QQTKNSNSAQSIDGQRPYMQNNRSKNSGNPNFRR 250
           RN IN+DG+LPSVNLT           Q+K  N  QS   QR    NNRS N      RR
Sbjct: 225 RNLINSDGSLPSVNLTLNDSSKKNNLHQSKCFNPHQSNYSQRGRGTNNRSSN------RR 284

Query: 251 NWNSNNRPQCQIYGKFGHTALRCYLRFEKTFLGPNGQSHMQHKFSGGSNSSINS-NMTAF 310
           NW  NN+PQCQI G+FGHTALRCY+RFE+ FLGPN   +        S   +N+ +  AF
Sbjct: 285 NWTGNNKPQCQICGRFGHTALRCYMRFERNFLGPNMNPNTFSPAGFSSGFPLNTPSHNAF 344

Query: 311 GNQQQAFTNG-FQPN--SNSHMAAFLAQQDFNRDTNWYPDSGATNHVTSNFNNLATSTEY 370
            +   A  NG F  N  S S M A +  QDFNRD+NWY DSG TNHVT+ F N +  +EY
Sbjct: 345 SS--PATQNGNFSMNSASPSQMQALMVAQDFNRDSNWYRDSGPTNHVTNEFGNFSLGSEY 404

Query: 371 TGDNQVRIGNGTGLQVLHTGSS 378
            GD ++++GNGTG Q     SS
Sbjct: 405 HGDGKIQVGNGTGYQNWPAASS 418

BLAST of Moc10g05980.1 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.5e-45
Identity = 153/485 (31.55%), Postives = 227/485 (46.80%), Query Frame = 0

Query: 11  ISTALQGHDLEHHITGKSEIPPQIISITGENSSSTLTVNPKYHQWMKQDKLITSWLFSSM 70
           +     G++L   + G + +PP  I      + +   VNP Y +W +QDKLI S +  ++
Sbjct: 38  VHALFDGYELAGFLDGSTTMPPATI-----GTDAAPRVNPDYTRWKRQDKLIYSAVLGAI 97

Query: 71  FEEILGEMIHCNTAREVWQILENLYTSRNLARVMQLKSKLENIKKGNLPLKDYFQKVKAL 130
              +   +    TA ++W+ L  +Y + +   V QL+++L+   KG   + DY Q +   
Sbjct: 98  SMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGTKTIDDYMQGLVTR 157

Query: 131 VDSLAAAGKKVTVEDHIMHILTGLRSEFESTVSVISARTQTQTLQEVYSLLLSHEGR--- 190
            D LA  GK +  ++ +  +L  L  E++  +  I+A+    TL E++  LL+HE +   
Sbjct: 158 FDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEIHERLLNHESKILA 217

Query: 191 -NERNSINTDGTLPSVNLTQQTKNSNSAQSIDGQRPYMQNNRSK--NSGNPNFRRNWNSN 250
            +    I       S   T  T N+N+    +       NN SK     + NF  N N+ 
Sbjct: 218 VSSATVIPITANAVSHRNTTTTNNNNNGNRNNRYDNRNNNNNSKPWQQSSTNFHPN-NNQ 277

Query: 251 NRP---QCQIYGKFGHTALRCYLRFEKTFLGPNGQSHMQHKFSGGSNSSINSNMTAFGNQ 310
           ++P   +CQI G  GH+A RC              S +QH       SS+NS       Q
Sbjct: 278 SKPYLGKCQICGVQGHSAKRC--------------SQLQHFL-----SSVNS------QQ 337

Query: 311 QQAFTNGFQPNSNSHMAAFLAQQDFNRDTNWYPDSGATNHVTSNFNNLATSTEYTGDNQV 370
             +    +QP +N      LA        NW  DSGAT+H+TS+FNNL+    YTG + V
Sbjct: 338 PPSPFTPWQPRAN------LALGSPYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDV 397

Query: 371 RIGNGTGLQVLHTGS-SFVTSSNSLHSPNTKPVFILDNLLHVPNITKNLISVSQFARDNS 430
            + +G+ + + HTGS S  T S  L+         L N+L+VPNI KNLISV +    N 
Sbjct: 398 MVADGSTIPISHTGSTSLSTKSRPLN---------LHNILYVPNIHKNLISVYRLCNANG 457

Query: 431 VFFEFHPYHCFVKDLQTGHILLQGKVHDGLYRFELEKAAPTSSDRTASGVSVLFQKPTS- 483
           V  EF P    VKDL TG  LLQGK  D LY + +  + P S          LF  P+S 
Sbjct: 458 VSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQPVS----------LFASPSSK 466

BLAST of Moc10g05980.1 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 2.2e-36
Identity = 146/505 (28.91%), Postives = 229/505 (45.35%), Query Frame = 0

Query: 11  ISTALQGHDLEHHITGKSEIPPQIISITGENSSSTLTVNPKYHQWMKQDKLITSWLFSSM 70
           +     G++L   + G + +PP  I      + +   VNP Y +W +QDKLI S +  ++
Sbjct: 38  VHALFDGYELAGFLDGSTPMPPATI-----GTDAVPRVNPDYTRWRRQDKLIYSAILGAI 97

Query: 71  FEEILGEMIHCNTAREVWQILENLYTSRNLARVMQLKSKLENIKKGNLPLKDYFQKVKAL 130
              +   +    TA ++W+ L  +Y + +   V QL                   +    
Sbjct: 98  SMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQL-------------------RFITR 157

Query: 131 VDSLAAAGKKVTVEDHIMHILTGLRSEFESTVSVISARTQTQTLQEVYSLLLSHEGRNER 190
            D LA  GK +  ++ +  +L  L  +++  +  I+A+    +L E++  L++ E  ++ 
Sbjct: 158 FDQLALLGKPMDHDEQVERVLENLPDDYKPVIDQIAAKDTPPSLTEIHERLINRE--SKL 217

Query: 191 NSINTDGTLP-SVN-LTQQTKNSNSAQSIDG-QRPYMQNNRSKNSGNPNFRRNWNSNNRP 250
            ++N+   +P + N +T +  N+N  Q+  G  R Y  NN   NS  P+   + + N +P
Sbjct: 218 LALNSAEVVPITANVVTHRNTNTNRNQNNRGDNRNYNNNNNRSNSWQPSSSGSRSDNRQP 277

Query: 251 -----QCQIYGKFGHTALRCYLRFEKTFLGPNGQSHMQHKFSGGSNSSINSNMTAFGNQQ 310
                +CQI    GH+A RC                  H+F   +N             Q
Sbjct: 278 KPYLGRCQICSVQGHSAKRC---------------PQLHQFQSTTN-------------Q 337

Query: 311 QAFTNGF---QPNSNSHMAAFLAQQDFNRDTNWYPDSGATNHVTSNFNNLATSTEYTGDN 370
           Q  T+ F   QP +N      LA        NW  DSGAT+H+TS+FNNL+    YTG +
Sbjct: 338 QQSTSPFTPWQPRAN------LAVNSPYNANNWLLDSGATHHITSDFNNLSFHQPYTGGD 397

Query: 371 QVRIGNGTGLQVLHTGS-SFVTSSNSLHSPNTKPVFILDNLLHVPNITKNLISVSQFARD 430
            V I +G+ + + HTGS S  TSS SL          L+ +L+VPNI KNLISV +    
Sbjct: 398 DVMIADGSTIPITHTGSASLPTSSRSLD---------LNKVLYVPNIHKNLISVYRLCNT 457

Query: 431 NSVFFEFHPYHCFVKDLQTGHILLQGKVHDGLYRFELEK-------AAPTSSDRTASGVS 490
           N V  EF P    VKDL TG  LLQGK  D LY + +         A+P S    +S  S
Sbjct: 458 NRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHS 473

Query: 491 VLFQKPTSHSSSPTIQTTLPIISPT 497
            L     +  +S     +LP+++P+
Sbjct: 518 RLGHPSLAILNSVISNHSLPVLNPS 473

BLAST of Moc10g05980.1 vs. ExPASy TrEMBL
Match: A0A6J1C6N9 (dr1-associated corepressor homolog isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008464 PE=4 SV=1)

HSP 1 Score: 615.1 bits (1585), Expect = 2.8e-172
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0

Query: 56  MKQDKLITSWLFSSMFEEILGEMIHCNTAREVWQILENLYTSRNLARVMQLKSKLENIKK 115
           MKQDKLITSWLFSSMFEEILGEMIHCNTAREVWQILENLYTSRNLARVMQLKSKLENIKK
Sbjct: 1   MKQDKLITSWLFSSMFEEILGEMIHCNTAREVWQILENLYTSRNLARVMQLKSKLENIKK 60

Query: 116 GNLPLKDYFQKVKALVDSLAAAGKKVTVEDHIMHILTGLRSEFESTVSVISARTQTQTLQ 175
           GNLPLKDYFQKVKALVDSLAAAGKKVTVEDHIMHILTGLRSEFESTVSVISARTQTQTLQ
Sbjct: 61  GNLPLKDYFQKVKALVDSLAAAGKKVTVEDHIMHILTGLRSEFESTVSVISARTQTQTLQ 120

Query: 176 EVYSLLLSHEGRNERNSINTDGTLPSVNLTQQTKNSNSAQSIDGQRPYMQNNRSKNSGNP 235
           EVYSLLLSHEGRNERNSINTDGTLPSVNLTQQTKNSNSAQSIDGQRPYMQNNRSKNSGNP
Sbjct: 121 EVYSLLLSHEGRNERNSINTDGTLPSVNLTQQTKNSNSAQSIDGQRPYMQNNRSKNSGNP 180

Query: 236 NFRRNWNSNNRPQCQIYGKFGHTALRCYLRFEKTFLGPNGQSHMQHKFSGGSNSSINSNM 295
           NFRRNWNSNNRPQCQIYGKFGHTALRCYLRFEKTFLGPNGQSHMQHKFSGGSNSSINSNM
Sbjct: 181 NFRRNWNSNNRPQCQIYGKFGHTALRCYLRFEKTFLGPNGQSHMQHKFSGGSNSSINSNM 240

Query: 296 TAFGNQQQAFTNGFQPNSNSHMAAFLAQQDFNRDTNWYPDSGATNHVTSNFNNLATSTEY 355
           TAFGNQQQAFTNGFQPNSNSHMAAFLAQQDFNRDTNWYPDSGATNHVTSNFNNLATSTEY
Sbjct: 241 TAFGNQQQAFTNGFQPNSNSHMAAFLAQQDFNRDTNWYPDSGATNHVTSNFNNLATSTEY 300

Query: 356 TGDNQVRIGNGTG 369
           TGDNQVRIGNGTG
Sbjct: 301 TGDNQVRIGNGTG 313

BLAST of Moc10g05980.1 vs. ExPASy TrEMBL
Match: A0A6J1C8R2 (dr1-associated corepressor homolog isoform X2 OS=Momordica charantia OX=3673 GN=LOC111008464 PE=4 SV=1)

HSP 1 Score: 611.3 bits (1575), Expect = 4.1e-171
Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0

Query: 56  MKQDKLITSWLFSSMFEEILGEMIHCNTAREVWQILENLYTSRNLARVMQLKSKLENIKK 115
           MKQDKLITSWLFSSMFEEILGEMIHCNTAREVWQILENLYTSRNLARVMQLKSKLENIKK
Sbjct: 1   MKQDKLITSWLFSSMFEEILGEMIHCNTAREVWQILENLYTSRNLARVMQLKSKLENIKK 60

Query: 116 GNLPLKDYFQKVKALVDSLAAAGKKVTVEDHIMHILTGLRSEFESTVSVISARTQTQTLQ 175
           GNLPLKDYFQKVKALVDSLAAAGKKVTVEDHIMHILTGLRSEFESTVSVISARTQTQTLQ
Sbjct: 61  GNLPLKDYFQKVKALVDSLAAAGKKVTVEDHIMHILTGLRSEFESTVSVISARTQTQTLQ 120

Query: 176 EVYSLLLSHEGRNERNSINTDGTLPSVNLTQQTKNSNSAQSIDGQRPYMQNNRSKNSGNP 235
           EVYSLLLSHEGRNERNSINTDGTLPSVNLTQQTKNSNSAQSIDGQRPYMQNNRSKNSGNP
Sbjct: 121 EVYSLLLSHEGRNERNSINTDGTLPSVNLTQQTKNSNSAQSIDGQRPYMQNNRSKNSGNP 180

Query: 236 NFRRNWNSNNRPQCQIYGKFGHTALRCYLRFEKTFLGPNGQSHMQHKFSGGSNSSINSNM 295
           NFRRNWNSNNRPQCQIYGKFGHTALRCYLRFEKTFLGPNGQSHMQHKFSGGSNSSINSNM
Sbjct: 181 NFRRNWNSNNRPQCQIYGKFGHTALRCYLRFEKTFLGPNGQSHMQHKFSGGSNSSINSNM 240

Query: 296 TAFGNQQQAFTNGFQPNSNSHMAAFLAQQDFNRDTNWYPDSGATNHVTSNFNNLATSTEY 355
           TAFGNQQQAFTNGFQPNSNSHMAAFLAQQDFNRDTNWYPDSGATNHVTSNFNNLATSTEY
Sbjct: 241 TAFGNQQQAFTNGFQPNSNSHMAAFLAQQDFNRDTNWYPDSGATNHVTSNFNNLATSTEY 300

Query: 356 TGDNQVRIGNG 367
           TGDNQVRIGNG
Sbjct: 301 TGDNQVRIGNG 311

BLAST of Moc10g05980.1 vs. ExPASy TrEMBL
Match: A0A5A7U233 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00060 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 1.3e-95
Identity = 209/453 (46.14%), Postives = 290/453 (64.02%), Query Frame = 0

Query: 11  ISTALQGHDLEHHITGKSEIPPQ-IISITGENSSSTLTVNPKYHQWMKQDKLITSWLFSS 70
           I TAL+ +DLE+ +  +SE P + +IS    ++S+T T NP Y  W +QD+LI+SWL  S
Sbjct: 46  ILTALEAYDLENFLESESEPPSKYLISTESSSASATGTPNPAYKVWKRQDRLISSWLLGS 105

Query: 71  MFEEILGEMIHCNTAREVWQILENLYTSRNLARVMQLKSKLENIKKGNLPLKDYFQKVKA 130
           M EEIL +M+HC +A+E+W+ L+ +++SR LA+ MQ K+KL NIKKG++PLK+YF K+  
Sbjct: 106 MSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQ 165

Query: 131 LVDSLAAAGKKVTVEDHIMHILTGLRSEFESTVSVISARTQTQTLQEVYSLLLSHEGRNE 190
            VD+LA+  K V+ +DHI++IL GL S+++S +SVISART + ++QEV SLLL+ E +NE
Sbjct: 166 CVDALASINKPVSSDDHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNE 225

Query: 191 RNSINTDGTLPSVNLTQQTKNSNSAQSIDGQRPYMQNNRSKNS----GNPNFRRNWNSN- 250
              I ++  LPSVN+  QT    +   I   +    NN S N     GN    R    N 
Sbjct: 226 SKLI-SETALPSVNIVTQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGRRGNR 285

Query: 251 NRPQCQIYGKFGHTALRCYLRFEKTFLGPNGQSHMQHKFSGGSNSSINSNMTAFGNQQQA 310
           N+PQCQI  K G++A RC+ R+                 S  S  S NS+ T++ N    
Sbjct: 286 NKPQCQICAKLGYSADRCFFRYTPR--------------SNSSGYSPNSHNTSYTNM--- 345

Query: 311 FTNGFQPNSNSHMAAFLAQQDFNRDTNWYPDSGATNHVTSNFNNLATSTEYTGDNQVRIG 370
                  N++  M+A +A  D N D+NWYPDSGATNH+T + +NL+  +EY G NQ+   
Sbjct: 346 -------NNHPQMSAMVAALDLNIDSNWYPDSGATNHLTHSLSNLSIGSEYGGGNQIYAA 405

Query: 371 NGTGLQVLHTGS-SFVTSSNSLHSPNTKPVFILDNLLHVPNITKNLISVSQFARDNSVFF 430
           NG+GL + H GS SF +S+    S      F L+NLL VP+ITKNLISVSQFA+DN VFF
Sbjct: 406 NGSGLPITHYGSMSFNSSTLPFKS------FTLNNLLQVPSITKNLISVSQFAKDNHVFF 465

Query: 431 EFHPYHCFVKDLQTGHILLQGKVHDGLYRFELE 457
           EFHP  C+VKDL TG +LLQG ++DGLY+F +E
Sbjct: 466 EFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIE 467

BLAST of Moc10g05980.1 vs. ExPASy TrEMBL
Match: A0A5D3CH97 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G00040 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 1.3e-95
Identity = 209/453 (46.14%), Postives = 290/453 (64.02%), Query Frame = 0

Query: 11  ISTALQGHDLEHHITGKSEIPPQ-IISITGENSSSTLTVNPKYHQWMKQDKLITSWLFSS 70
           I TAL+ +DLE+ +  +SE P + +IS    ++S+T T NP Y  W +QD+LI+SWL  S
Sbjct: 46  ILTALEAYDLENFLESESEPPSKYLISTESSSASATGTPNPAYKVWKRQDRLISSWLLGS 105

Query: 71  MFEEILGEMIHCNTAREVWQILENLYTSRNLARVMQLKSKLENIKKGNLPLKDYFQKVKA 130
           M EEIL +M+HC +A+E+W+ L+ +++SR LA+ MQ K+KL NIKKG++PLK+YF K+  
Sbjct: 106 MSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQ 165

Query: 131 LVDSLAAAGKKVTVEDHIMHILTGLRSEFESTVSVISARTQTQTLQEVYSLLLSHEGRNE 190
            VD+LA+  K V+ +DHI++IL GL S+++S +SVISART + ++QEV SLLL+ E +NE
Sbjct: 166 CVDALASINKPVSSDDHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNE 225

Query: 191 RNSINTDGTLPSVNLTQQTKNSNSAQSIDGQRPYMQNNRSKNS----GNPNFRRNWNSN- 250
              I ++  LPSVN+  QT    +   I   +    NN S N     GN    R    N 
Sbjct: 226 SKLI-SETALPSVNIVTQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGRRGNR 285

Query: 251 NRPQCQIYGKFGHTALRCYLRFEKTFLGPNGQSHMQHKFSGGSNSSINSNMTAFGNQQQA 310
           N+PQCQI  K G++A RC+ R+                 S  S  S NS+ T++ N    
Sbjct: 286 NKPQCQICAKLGYSADRCFFRYTPR--------------SNSSGYSPNSHNTSYTNM--- 345

Query: 311 FTNGFQPNSNSHMAAFLAQQDFNRDTNWYPDSGATNHVTSNFNNLATSTEYTGDNQVRIG 370
                  N++  M+A +A  D N D+NWYPDSGATNH+T + +NL+  +EY G NQ+   
Sbjct: 346 -------NNHPQMSAMVAALDLNIDSNWYPDSGATNHLTHSLSNLSIGSEYGGGNQIYAA 405

Query: 371 NGTGLQVLHTGS-SFVTSSNSLHSPNTKPVFILDNLLHVPNITKNLISVSQFARDNSVFF 430
           NG+GL + H GS SF +S+    S      F L+NLL VP+ITKNLISVSQFA+DN VFF
Sbjct: 406 NGSGLPITHYGSMSFNSSTLPFKS------FTLNNLLQVPSITKNLISVSQFAKDNHVFF 465

Query: 431 EFHPYHCFVKDLQTGHILLQGKVHDGLYRFELE 457
           EFHP  C+VKDL TG +LLQG ++DGLY+F +E
Sbjct: 466 EFHPTLCYVKDLDTGQVLLQGLLNDGLYKFTIE 467

BLAST of Moc10g05980.1 vs. ExPASy TrEMBL
Match: A0A6J1DLT9 (uncharacterized protein LOC111021757 OS=Momordica charantia OX=3673 GN=LOC111021757 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 8.2e-95
Identity = 208/382 (54.45%), Postives = 254/382 (66.49%), Query Frame = 0

Query: 11  ISTALQGHDLEHHITGKSEIPPQIISIT-GENSSSTLTVNPKYHQWMKQDKLITSWLFSS 70
           I TALQG+ LE +I    + P Q +  T  E+SSS+L  NP Y +W+KQDKLI++WL  S
Sbjct: 45  IRTALQGNGLESYIDSNEDTPAQFVQTTEDESSSSSLQQNPAYFEWIKQDKLISAWLLGS 104

Query: 71  MFEEILGEMIHCNTAREVWQILENLYTSRNLARVMQLKSKLENIKKGNLPLKDYFQKVKA 130
           M E+IL +M+ C +ARE+W +LE ++ SR LARVMQLK KLEN KKGNL LKDYF K+K 
Sbjct: 105 MNEDILSQMLDCKSAREIWTVLECMFASRTLARVMQLKLKLENFKKGNLSLKDYFLKIKN 164

Query: 131 LVDSLAAAGKKVTVEDHIMHILTGLRSEFESTVSVISARTQTQTLQEVYSLLLSHEGRNE 190
           LVDSLA AGKK++ EDHIMHIL GL  EF++ +SVI+AR   QTLQEV SLLL  EGRNE
Sbjct: 165 LVDSLAIAGKKLSTEDHIMHILAGLGPEFDAIISVITARNMPQTLQEVCSLLLQQEGRNE 224

Query: 191 RNSINTDGTLPSVNLT----------QQTKNSNSAQSIDGQRPYMQNNRSKNSGNPNFRR 250
           RN IN+DG+LPSVNLT           Q+K  N  QS   QR    NNRS N      RR
Sbjct: 225 RNLINSDGSLPSVNLTLNDSSKKNNLHQSKCFNPHQSNYSQRGRGTNNRSSN------RR 284

Query: 251 NWNSNNRPQCQIYGKFGHTALRCYLRFEKTFLGPNGQSHMQHKFSGGSNSSINS-NMTAF 310
           NW  NN+PQCQI G+FGHTALRCY+RFE+ FLGPN   +        S   +N+ +  AF
Sbjct: 285 NWTGNNKPQCQICGRFGHTALRCYMRFERNFLGPNMNPNTFSPAGFSSGFPLNTPSHNAF 344

Query: 311 GNQQQAFTNG-FQPN--SNSHMAAFLAQQDFNRDTNWYPDSGATNHVTSNFNNLATSTEY 370
            +   A  NG F  N  S S M A +  QDFNRD+NWY DSG TNHVT+ F N +  +EY
Sbjct: 345 SS--PATQNGNFSMNSASPSQMQALMVAQDFNRDSNWYRDSGPTNHVTNEFGNFSLGSEY 404

Query: 371 TGDNQVRIGNGTGLQVLHTGSS 378
            GD ++++GNGTG Q     SS
Sbjct: 405 HGDGKIQVGNGTGYQNWPAASS 418

BLAST of Moc10g05980.1 vs. TAIR 10
Match: AT5G48050.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 72.0 bits (175), Expect = 1.7e-12
Identity = 58/213 (27.23%), Postives = 103/213 (48.36%), Query Frame = 0

Query: 54  QWMKQDKLITSWLFSSMFEEILGEMIHCN-TAREVWQILENLYTSRNLARVMQLKSKLEN 113
           +W ++D L+  W++ ++ + +L  +I    TAR++W  LENL+     AR +Q +++L  
Sbjct: 66  RWKERDGLVKMWIYGTITDSLLDTIIKVGCTARDLWLSLENLFRDNKEARALQFENELRT 125

Query: 114 IKKGNLPLKDYFQKVKALVDSLAAAGKKVTVEDHIMHILTGLRSEFESTVSVISARTQTQ 173
               +L + +Y QK+K+L D L      ++    +MH+L GL  +++  ++VI  ++   
Sbjct: 126 TTIDDLSVHEYCQKLKSLSDLLTNVDSPISDRVLVMHLLNGLTEKYDYILNVIKHKSPFP 185

Query: 174 TLQEVYSLLLSHEGRNERNSINT-----DGTLPSVNLTQQTKNSNSAQSIDGQRPYMQNN 233
           +  E  S+LL  E R    S ++       +L +V  T   +     Q        M   
Sbjct: 186 SFTEARSMLLMEESRLSNKSKSSLSHTNHPSLSNVLFTVPRQQERYPQEYHNNNSNMGRG 245

Query: 234 RSK----NSGNPNFRRNWNSN---NRPQCQIYG 254
           RSK      G+ + R N N+N   N+P   IYG
Sbjct: 246 RSKKKNRGGGSSDGRYNNNNNWRLNQPPTWIYG 278

BLAST of Moc10g05980.1 vs. TAIR 10
Match: AT1G34070.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48050.1); Has 648 Blast hits to 647 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 25; Plants - 607; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 65.5 bits (158), Expect = 1.6e-10
Identity = 58/229 (25.33%), Postives = 108/229 (47.16%), Query Frame = 0

Query: 37  ITGENSSSTLTVNPKYHQWMKQDKLITSWLFSSMF-EEILGEMIHCNTAREVWQILENLY 96
           + G    + L  N     W K+D ++   L+ ++  ++  G  +  +T+R++W  ++N +
Sbjct: 47  VMGHIDGTLLPTNANDVNWQKRDGIVKLSLYGTLTPKQFQGSFVTSSTSRDIWLRIKNQF 106

Query: 97  TSRNLARVMQLKSKLENIKKGNLPLKDYFQKVKALVDSLAAAGKKVTVEDHIMHILTGLR 156
            +   AR ++L S+L     G++ + DY++K+K L DSL      VT  + +M++L GL 
Sbjct: 107 RNNKDARALRLDSELRTKDIGDMRVADYYRKMKKLADSLRNVDVPVTDRNLVMYVLNGLN 166

Query: 157 SEFESTVSVISARTQTQTLQEVYSLLLSHEGRNER----NSINTDGTLPSVNL--TQQTK 216
            +F++ ++VI  R    +  +  ++L   E R +R    N  + D +  S  L  ++   
Sbjct: 167 PKFDNIINVIKHRQPFPSFDDAATMLQEEEDRLKRAIKPNPTHVDHSSSSTVLACSEAPP 226

Query: 217 NSNSAQSIDGQRPYMQNNRSKNSGNPNFR-----------RNWNSNNRP 248
            +N  +S   Q  Y    R +  GN  FR             +NS NRP
Sbjct: 227 VTNFQRSGGNQMGY----RGRGRGNNIFRGRGGRFSYYNMPTFNSWNRP 271

BLAST of Moc10g05980.1 vs. TAIR 10
Match: AT1G21280.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.5 bits (114), Expect = 2.0e-05
Identity = 19/79 (24.05%), Postives = 47/79 (59.49%), Query Frame = 0

Query: 49  NPKYHQWMKQDKLITSWLFSSMFEEILGEMIHCNTAREVWQILENLYTSRNLARVMQLKS 108
           +P Y  W + + ++  WL +SM +++L  +++  TA ++W+ L  ++      ++ QL+ 
Sbjct: 73  SPLYQPWEQCNAMVMYWLMNSMTDKLLESVMYAETAHKMWEDLRRVFVPCVDLKIYQLRR 132

Query: 109 KLENIKKGNLPLKDYFQKV 128
           +L  +++G   +++YF K+
Sbjct: 133 RLATLRQGGDSVEEYFGKL 151

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022136882.15.9e-172100.00dr1-associated corepressor homolog isoform X1 [Momordica charantia][more]
XP_022136883.18.5e-171100.00dr1-associated corepressor homolog isoform X2 [Momordica charantia][more]
KAA0048297.12.6e-9546.14Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
TYK10642.12.6e-9546.14Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
XP_022154487.11.7e-9454.45uncharacterized protein LOC111021757 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Q94HW21.5e-4531.55Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT942.2e-3628.91Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
Match NameE-valueIdentityDescription
A0A6J1C6N92.8e-172100.00dr1-associated corepressor homolog isoform X1 OS=Momordica charantia OX=3673 GN=... [more]
A0A6J1C8R24.1e-171100.00dr1-associated corepressor homolog isoform X2 OS=Momordica charantia OX=3673 GN=... [more]
A0A5A7U2331.3e-9546.14Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5D3CH971.3e-9546.14Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A6J1DLT98.2e-9554.45uncharacterized protein LOC111021757 OS=Momordica charantia OX=3673 GN=LOC111021... [more]
Match NameE-valueIdentityDescription
AT5G48050.11.7e-1227.23CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BE... [more]
AT1G34070.11.6e-1025.33CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BE... [more]
AT1G21280.12.0e-0524.05CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Ha... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 55..189
e-value: 2.8E-22
score: 79.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 189..242
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 475..514
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 475..520
NoneNo IPR availablePANTHERPTHR34222FAMILY NOT NAMEDcoord: 10..382
NoneNo IPR availablePANTHERPTHR34222:SF48SUBFAMILY NOT NAMEDcoord: 10..382

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Moc10g05980Moc10g05980gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Moc10g05980.1.exon3Moc10g05980.1.exon3exon
Moc10g05980.1.exon2Moc10g05980.1.exon2exon
Moc10g05980.1.exon1Moc10g05980.1.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Moc10g05980.1cds.Moc10g05980.1_3CDS
cds.Moc10g05980.1cds.Moc10g05980.1_2CDS
cds.Moc10g05980.1cds.Moc10g05980.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Moc10g05980.1Moc10g05980.1-proteinpolypeptide