Moc09g05720.1 (mRNA) Bitter gourd (OHB3-1) v2

Overview


Name	Moc09g05720.1
Type	mRNA
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	UPF0496 protein 4-like
Location	chr9: 4385473 .. 4386420 (+)
Sequence length	948
RNA-Seq Expression	Moc09g05720.1
Synteny	Moc09g05720.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGCTTTTGCTACAAACCTTCAACAAGCTCTGTTCCAAGCTCGACAACCACCACCACCACCACCATCACCGCCGCCATGGATCTCAAGCTTCATCTGCTGCCTCTCATCTCCAGGCCTTCGAGTCCGACGTGTCGTCTTGCCTCATTCAATTTTCGGCCTCGAGCTCCGATTCCCGATTGCTGTCGTTCCCATGGCTTCTCCAGCTTCTCCAGACTCTGCCCATCGTTCACCAGGCGTTTACGAAATTGGCCGTGAATTTGGAGCATCCCGTCGGACAATGGCCGCCCGATTTGGTCGATGGGTATCTCAATTACACCCTTAATTTGCTTGATCTTCTAAATTCTGTCAGTTTCTCGCTCTCCCAATTGGGGCAATCTCGGCTTCTTCTTTCCCACGCTCTGGGCCTAATTCAGAGCTCCCCTTCCATGGCGGTGGAGCGTATGAAACCCATCGTGCCGAAGAAGAATTTCAGAGAATTTGAAATCAAAGCAGCCGTGAGAGATCGGAGAAAGGGCTGCTCCGGCGAAGATTGGGCGATCGAGAGAGCTCTGGTGACAATGGAGGGAATCGGGTATTGGGTCTGTGGGATTGTGCTTTCCGGTTGCGAGGGAGATTCCACGGCGTATTTGGCGGCGAGAAAGTCCGCCGCCGGTGTGGCGATTTCTTCGTTTAAGTCGTTGGATTCGGTTGTCCTTGAGGCGGTTTCCGGGAAGGGGAGTGTGCCGGAGGAAGTCGAGGAACTCAACGAGGCGGCGGCGCTGGTCGCCGCCGATTTGGTAAATGGGAGGAGCGGCAGCGGCGGAGCGGCGGAGGAAATGAGGAGGAGATCGGAGAGATTGGAGAAGGAGGTGGAGAGATTGAGGAAGGAGGTGGACGGAAGATTCTCGGAGGTTCTGGACGGAAGAAGCCGATTACTTGATGTTTTCAGAGAGGGAAAACATTGA

mRNA sequence

ATGGTGCTTTTGCTACAAACCTTCAACAAGCTCTGTTCCAAGCTCGACAACCACCACCACCACCACCATCACCGCCGCCATGGATCTCAAGCTTCATCTGCTGCCTCTCATCTCCAGGCCTTCGAGTCCGACGTGTCGTCTTGCCTCATTCAATTTTCGGCCTCGAGCTCCGATTCCCGATTGCTGTCGTTCCCATGGCTTCTCCAGCTTCTCCAGACTCTGCCCATCGTTCACCAGGCGTTTACGAAATTGGCCGTGAATTTGGAGCATCCCGTCGGACAATGGCCGCCCGATTTGGTCGATGGGTATCTCAATTACACCCTTAATTTGCTTGATCTTCTAAATTCTGTCAGTTTCTCGCTCTCCCAATTGGGGCAATCTCGGCTTCTTCTTTCCCACGCTCTGGGCCTAATTCAGAGCTCCCCTTCCATGGCGGTGGAGCGTATGAAACCCATCGTGCCGAAGAAGAATTTCAGAGAATTTGAAATCAAAGCAGCCGTGAGAGATCGGAGAAAGGGCTGCTCCGGCGAAGATTGGGCGATCGAGAGAGCTCTGGTGACAATGGAGGGAATCGGGTATTGGGTCTGTGGGATTGTGCTTTCCGGTTGCGAGGGAGATTCCACGGCGTATTTGGCGGCGAGAAAGTCCGCCGCCGGTGTGGCGATTTCTTCGTTTAAGTCGTTGGATTCGGTTGTCCTTGAGGCGGTTTCCGGGAAGGGGAGTGTGCCGGAGGAAGTCGAGGAACTCAACGAGGCGGCGGCGCTGGTCGCCGCCGATTTGGTAAATGGGAGGAGCGGCAGCGGCGGAGCGGCGGAGGAAATGAGGAGGAGATCGGAGAGATTGGAGAAGGAGGTGGAGAGATTGAGGAAGGAGGTGGACGGAAGATTCTCGGAGGTTCTGGACGGAAGAAGCCGATTACTTGATGTTTTCAGAGAGGGAAAACATTGA

Coding sequence (CDS)

ATGGTGCTTTTGCTACAAACCTTCAACAAGCTCTGTTCCAAGCTCGACAACCACCACCACCACCACCATCACCGCCGCCATGGATCTCAAGCTTCATCTGCTGCCTCTCATCTCCAGGCCTTCGAGTCCGACGTGTCGTCTTGCCTCATTCAATTTTCGGCCTCGAGCTCCGATTCCCGATTGCTGTCGTTCCCATGGCTTCTCCAGCTTCTCCAGACTCTGCCCATCGTTCACCAGGCGTTTACGAAATTGGCCGTGAATTTGGAGCATCCCGTCGGACAATGGCCGCCCGATTTGGTCGATGGGTATCTCAATTACACCCTTAATTTGCTTGATCTTCTAAATTCTGTCAGTTTCTCGCTCTCCCAATTGGGGCAATCTCGGCTTCTTCTTTCCCACGCTCTGGGCCTAATTCAGAGCTCCCCTTCCATGGCGGTGGAGCGTATGAAACCCATCGTGCCGAAGAAGAATTTCAGAGAATTTGAAATCAAAGCAGCCGTGAGAGATCGGAGAAAGGGCTGCTCCGGCGAAGATTGGGCGATCGAGAGAGCTCTGGTGACAATGGAGGGAATCGGGTATTGGGTCTGTGGGATTGTGCTTTCCGGTTGCGAGGGAGATTCCACGGCGTATTTGGCGGCGAGAAAGTCCGCCGCCGGTGTGGCGATTTCTTCGTTTAAGTCGTTGGATTCGGTTGTCCTTGAGGCGGTTTCCGGGAAGGGGAGTGTGCCGGAGGAAGTCGAGGAACTCAACGAGGCGGCGGCGCTGGTCGCCGCCGATTTGGTAAATGGGAGGAGCGGCAGCGGCGGAGCGGCGGAGGAAATGAGGAGGAGATCGGAGAGATTGGAGAAGGAGGTGGAGAGATTGAGGAAGGAGGTGGACGGAAGATTCTCGGAGGTTCTGGACGGAAGAAGCCGATTACTTGATGTTTTCAGAGAGGGAAAACATTGA

Protein sequence

MVLLLQTFNKLCSKLDNHHHHHHHRRHGSQASSAASHLQAFESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQSRLLLSHALGLIQSSPSMAVERMKPIVPKKNFREFEIKAAVRDRRKGCSGEDWAIERALVTMEGIGYWVCGIVLSGCEGDSTAYLAARKSAAGVAISSFKSLDSVVLEAVSGKGSVPEEVEELNEAAALVAADLVNGRSGSGGAAEEMRRRSERLEKEVERLRKEVDGRFSEVLDGRSRLLDVFREGKH

Homology

[Close]

BLAST of Moc09g05720.1 vs. NCBI nr
Match: XP_022154307.1 (UPF0496 protein 4-like [Momordica charantia])

HSP 1 Score: 600.5 bits (1547), Expect = 8.3e-168
Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0


Query: 1   MVLLLQTFNKLCSKLDNHHHHHHHRRHGSQASSAASHLQAFESDVSSCLIQFSASSSDSR 60
           MVLLLQTFNKLCSKLDNHHHHHHHRRHGSQASSAASHLQAFESDVSSCLIQFSASSSDSR
Sbjct: 1   MVLLLQTFNKLCSKLDNHHHHHHHRRHGSQASSAASHLQAFESDVSSCLIQFSASSSDSR 60

Query: 61  LLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFS 120
           LLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFS
Sbjct: 61  LLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFS 120

Query: 121 LSQLGQSRLLLSHALGLIQSSPSMAVERMKPIVPKKNFREFEIKAAVRDRRKGCSGEDWA 180
           LSQLGQSRLLLSHALGLIQSSPSMAVERMKPIVPKKNFREFEIKAAVRDRRKGCSGEDWA
Sbjct: 121 LSQLGQSRLLLSHALGLIQSSPSMAVERMKPIVPKKNFREFEIKAAVRDRRKGCSGEDWA 180

Query: 181 IERALVTMEGIGYWVCGIVLSGCEGDSTAYLAARKSAAGVAISSFKSLDSVVLEAVSGKG 240
           IERALVTMEGIGYWVCGIVLSGCEGDSTAYLAARKSAAGVAISSFKSLDSVVLEAVSGKG
Sbjct: 181 IERALVTMEGIGYWVCGIVLSGCEGDSTAYLAARKSAAGVAISSFKSLDSVVLEAVSGKG 240

Query: 241 SVPEEVEELNEAAALVAADLVNGRSGSGGAAEEMRRRSERLEKEVERLRKEVDGRFSEVL 300
           SVPEEVEELNEAAALVAADLVNGRSGSGGAAEEMRRRSERLEKEVERLRKEVDGRFSEVL
Sbjct: 241 SVPEEVEELNEAAALVAADLVNGRSGSGGAAEEMRRRSERLEKEVERLRKEVDGRFSEVL 300

Query: 301 DGRSRLLDVFREGKH 316
           DGRSRLLDVFREGKH
Sbjct: 301 DGRSRLLDVFREGKH 315

[Close]

BLAST of Moc09g05720.1 vs. NCBI nr
Match: XP_038896303.1 (protein BPS1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 380.9 bits (977), Expect = 1.0e-101
Identity = 210/316 (66.46%), Postives = 243/316 (76.90%), Query Frame = 0


Query: 1   MVLLLQTFNKLCSKLDNHHHHHHHRRHGSQASSAASHLQAFESDVSSCLIQFSASSSDSR 60
           M LLLQTFNKLCSKLDNHHH     R G ++S + S LQAFE DVSSCL Q   S+SD +
Sbjct: 1   MPLLLQTFNKLCSKLDNHHH-----RRGCKSSFSVSRLQAFEDDVSSCLNQLLLSTSDLK 60

Query: 61  LLSFPWLLQLLQTL-PIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSF 120
            LSF WLLQLLQ L P +HQAF KL V+LE+PVG+W  DLVDGYLNY+LNLLDLLNS+SF
Sbjct: 61  SLSFRWLLQLLQGLIPSIHQAFAKLVVDLEYPVGKWGADLVDGYLNYSLNLLDLLNSISF 120

Query: 121 SLSQLGQSRLLLSHALGLIQSSPSMAVERMKPIVPKKNFREFEIKAAVRDRRKGCSGEDW 180
           SL+QL  SR+ LS+AL LIQSSP MAV R+KPIV K++F   EI+  V+D++KGCS E+W
Sbjct: 121 SLAQLRNSRVSLSYALSLIQSSPLMAVSRLKPIVLKRSFEGSEIRGNVKDQKKGCSDEEW 180

Query: 181 AIERALVTMEGIGYWVCGIVLSGCEGDSTAYLAARKSAAGVAISSFKSLDSVVLEAVSGK 240
           AIE+AL TMEG+GYWVCGIVLSGCEGDSTAY   R+ AAGV + +FK LDSV+   VS K
Sbjct: 181 AIEKALATMEGLGYWVCGIVLSGCEGDSTAYFEMRRLAAGVTVPAFKVLDSVIFAVVSAK 240

Query: 241 GSVPEEVEELNEAAALVAADLVNGRSGSGGAAEEMRRRSERLEKEVERLRKEVDGRFSEV 300
           GSV EEVEE+N A A +         G G A EEMRRR  RLEK V+ + KEVDGRFSEV
Sbjct: 241 GSVLEEVEEVNAAVAKIIG------GGGGEAVEEMRRRLGRLEKTVDGMGKEVDGRFSEV 300

Query: 301 LDGRSRLLDVFREGKH 316
           LDGRSRLLDVFR+ KH
Sbjct: 301 LDGRSRLLDVFRQPKH 305

[Close]

BLAST of Moc09g05720.1 vs. NCBI nr
Match: XP_022960422.1 (protein BPS1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 380.2 bits (975), Expect = 1.8e-101
Identity = 210/315 (66.67%), Postives = 247/315 (78.41%), Query Frame = 0


Query: 1   MVLLLQTFNKLCSKLDNHHHHHHHRRHGSQASSAASHLQAFESDVSSCLIQFSASSSDSR 60
           M+LLLQ+FNK CSK     ++HHH RHG++AS + S LQAF+++VSSCL Q   SSSDS 
Sbjct: 1   MLLLLQSFNKHCSKF----YNHHHSRHGNRASFSVSCLQAFDAEVSSCLNQLLLSSSDST 60

Query: 61  LLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFS 120
            LSF WLLQLLQ LP++HQAF KL V+L+ PV +W  DLVDGYLNY+LNLLDLLNSVSFS
Sbjct: 61  TLSFHWLLQLLQALPVLHQAFAKLVVDLDCPVAKWGADLVDGYLNYSLNLLDLLNSVSFS 120

Query: 121 LSQLGQSRLLLSHALGLIQSSPSMAVERMKPIVPKKNFREFEIKAAVRDRRKGCSGEDWA 180
           LSQLG SRL L++AL L++SSP MAV R+KPIV K+NF   E +  V DR+KG S E+WA
Sbjct: 121 LSQLGNSRLSLAYALSLVRSSPLMAVARLKPIVMKRNFMGLENRGIVADRKKGYSSEEWA 180

Query: 181 IERALVTMEGIGYWVCGIVLSGCEGDSTAYLAARKSAAGVAISSFKSLDSVVLEAVSGKG 240
           IERAL TM GIGYWVCG+V+SGCEGDSTAYL  R+ AAGVA+ +FK LDSV    VS KG
Sbjct: 181 IERALATMMGIGYWVCGVVISGCEGDSTAYLEMRRLAAGVAVPAFKELDSV----VSKKG 240

Query: 241 SVPEEVEELNEAAALVAADLVNGRSGSGGAAEEMRRRSERLEKEVERLRKEVDGRFSEVL 300
           +VPEEV+E+N A    A +++    G G AAEEMRRR ERLEK VERL KEVDGRFSEVL
Sbjct: 241 NVPEEVKEVNCA----AKEVIGSGGGDGEAAEEMRRRLERLEKAVERLVKEVDGRFSEVL 300

Query: 301 DGRSRLLDVFREGKH 316
           DGRSRLLD FR+ KH
Sbjct: 301 DGRSRLLDAFRQPKH 303

[Close]

BLAST of Moc09g05720.1 vs. NCBI nr
Match: KAG6593278.1 (Protein BPS1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 378.6 bits (971), Expect = 5.1e-101
Identity = 209/315 (66.35%), Postives = 246/315 (78.10%), Query Frame = 0


Query: 1   MVLLLQTFNKLCSKLDNHHHHHHHRRHGSQASSAASHLQAFESDVSSCLIQFSASSSDSR 60
           M+LLLQ+FNK CSK     ++HHH RHG++AS + S LQAF+++VSSCL Q   SSSDS 
Sbjct: 1   MLLLLQSFNKHCSKF----YNHHHSRHGNRASFSVSCLQAFDAEVSSCLNQLLLSSSDST 60

Query: 61  LLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFS 120
            LSF WLLQLLQ LP++HQAF KL V+L+ PV +W  DLVDGYLNY+LNLLDLLNSVSFS
Sbjct: 61  TLSFHWLLQLLQALPVLHQAFAKLVVDLDCPVAKWGADLVDGYLNYSLNLLDLLNSVSFS 120

Query: 121 LSQLGQSRLLLSHALGLIQSSPSMAVERMKPIVPKKNFREFEIKAAVRDRRKGCSGEDWA 180
           LSQLG SRL L++AL L++SSP MAV R+KPIV K+NF   E +  V DR+KG SGE+WA
Sbjct: 121 LSQLGNSRLSLAYALSLVRSSPLMAVARLKPIVMKRNFMGLENRGIVVDRKKGYSGEEWA 180

Query: 181 IERALVTMEGIGYWVCGIVLSGCEGDSTAYLAARKSAAGVAISSFKSLDSVVLEAVSGKG 240
           IERAL TM GIGYWVCG+V+SGCEGDSTAY   R+ AAGV + +FK LDSV    VS KG
Sbjct: 181 IERALATMMGIGYWVCGVVISGCEGDSTAYFEMRRLAAGVTVPAFKELDSV----VSKKG 240

Query: 241 SVPEEVEELNEAAALVAADLVNGRSGSGGAAEEMRRRSERLEKEVERLRKEVDGRFSEVL 300
           +VPEEV+E+N A    A +++    G G AAEEMRRR ERLEK VERL KEVDGRFSEVL
Sbjct: 241 NVPEEVKEVNCA----AKEVIGSGGGDGEAAEEMRRRLERLEKAVERLVKEVDGRFSEVL 300

Query: 301 DGRSRLLDVFREGKH 316
           DGRSRLLD FR+ KH
Sbjct: 301 DGRSRLLDAFRQPKH 303

[Close]

BLAST of Moc09g05720.1 vs. NCBI nr
Match: KAG7025628.1 (Protein BPS1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 377.9 bits (969), Expect = 8.7e-101
Identity = 209/315 (66.35%), Postives = 246/315 (78.10%), Query Frame = 0


Query: 1   MVLLLQTFNKLCSKLDNHHHHHHHRRHGSQASSAASHLQAFESDVSSCLIQFSASSSDSR 60
           M+LLLQ+FNK CSK     ++HHH RHG++AS + S LQAF+++VSSCL Q   SSSDSR
Sbjct: 1   MLLLLQSFNKHCSKF----YNHHHSRHGNRASFSVSCLQAFDAEVSSCLNQLLLSSSDSR 60

Query: 61  LLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFS 120
            LSF WLLQLLQ LP++HQAF KL V+L+ PV +W  DLVDGYLNY+LNLLDLLNSVSFS
Sbjct: 61  TLSFHWLLQLLQALPVLHQAFAKLVVDLDCPVAKWGADLVDGYLNYSLNLLDLLNSVSFS 120

Query: 121 LSQLGQSRLLLSHALGLIQSSPSMAVERMKPIVPKKNFREFEIKAAVRDRRKGCSGEDWA 180
           LSQLG SRL L++AL L++SSP MAV  +KPIV K+NF   E +  V DR+KG SGE+WA
Sbjct: 121 LSQLGNSRLSLAYALSLVRSSPLMAVAHLKPIVMKRNFMGVENRGIVVDRKKGYSGEEWA 180

Query: 181 IERALVTMEGIGYWVCGIVLSGCEGDSTAYLAARKSAAGVAISSFKSLDSVVLEAVSGKG 240
           IERAL TM GIGYWVCG+V+SGCEGDSTAYL   + AAGV + +FK LDSV    VS KG
Sbjct: 181 IERALATMMGIGYWVCGVVISGCEGDSTAYLEMSRLAAGVTVPAFKQLDSV----VSKKG 240

Query: 241 SVPEEVEELNEAAALVAADLVNGRSGSGGAAEEMRRRSERLEKEVERLRKEVDGRFSEVL 300
           +VPEEV+E+N A    A +++    G G AAEEMRRR ERLEK VERL KEVDGRFSEVL
Sbjct: 241 NVPEEVKEVNCA----AKEVIGSGGGDGEAAEEMRRRLERLEKAVERLVKEVDGRFSEVL 300

Query: 301 DGRSRLLDVFREGKH 316
           DGRSRLLD FR+ KH
Sbjct: 301 DGRSRLLDAFRQPKH 303

[Close]

BLAST of Moc09g05720.1 vs. ExPASy Swiss-Prot
Match: Q9LMM6 (Protein BPS1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BPS1 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 4.5e-07
Identity = 34/104 (32.69%), Postives = 57/104 (54.81%), Query Frame = 0


Query: 38  LQAFESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPP 97
           L  FE++++S + +       S +L+  W+ Q +++L   H     L  +LE PV  W  
Sbjct: 36  LNNFETNLASSISKL-VPKEKSDILTVSWMKQAMESLCETHNGIKTLITDLELPVSDWED 95

Query: 98  DLVDGYLNYTLNLLDLLNSVSFSLSQLGQSRLLLSHALGLIQSS 142
             VD YL+ ++ LLDL N+ S  L++L Q  LLL  AL  ++++
Sbjct: 96  KWVDVYLDISVKLLDLCNAFSSELTRLNQGHLLLQFALHNLEAN 138

[Close]

BLAST of Moc09g05720.1 vs. ExPASy Swiss-Prot
Match: A2Z9A6 (UPF0496 protein 4 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_033149 PE=3 SV=2)

HSP 1 Score: 53.5 bits (127), Expect = 4.9e-06
Identity = 63/249 (25.30%), Postives = 104/249 (41.77%), Query Frame = 0


Query: 28  GSQASSAASHLQAFESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVN 87
           G+  S     L A   D  +  ++     + S +L+  W+   +  L  +H     L  +
Sbjct: 25  GAHLSRKLQELLASYEDALALSLRKLKPEAASDVLTLSWMRLAVDCLSELHTNIANLITD 84

Query: 88  LEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQSRLLLSHALGLIQSSPSM-AV 147
           LE PV  W    VD YLN ++ LLD+  ++S  LS+L Q +LLL +AL ++ S   + + 
Sbjct: 85  LELPVSDWDDKWVDIYLNSSVKLLDICIALSSELSRLDQGQLLLQYALHVLGSESGVPSQ 144

Query: 148 ERMKPIVPKKNFREFEIKAAVR-DRRKGCSG------------------EDWAIERALVT 207
           E++K   P  + RE+     VR  R   CS                   +   + RAL  
Sbjct: 145 EQLKRAEP--SLREWMELVGVRCPRLVSCSATLQELAGNLSLMKVKNSVKGKVLMRALYG 204

Query: 208 MEGIGYWVCGIVLSGCEGDSTAYLAARKSAAGVAISSFKSLDSVVLEAVSGK--GSVPEE 255
           +E +  +VC I ++   G     +            +F  L + V E ++ +  G     
Sbjct: 205 IESVTVFVCSIFVAVLSGSPKPLVELHVPEKFGWSQAFNDLHTAVSEELTRQLAGGSVAA 264

[Close]

BLAST of Moc09g05720.1 vs. ExPASy Swiss-Prot
Match: Q337C0 (UPF0496 protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0513300 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 6.5e-06
Identity = 63/249 (25.30%), Postives = 104/249 (41.77%), Query Frame = 0


Query: 28  GSQASSAASHLQAFESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVN 87
           G+  S     L A   D  +  ++     + S +L+  W+   +  L  +H     L  +
Sbjct: 25  GAHLSRKLQELLASYEDALALSLRKLKPEAASDVLTLSWMRLAVDCLSELHTNIANLITD 84

Query: 88  LEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQSRLLLSHALGLIQSSPSM-AV 147
           LE PV  W    VD YLN ++ LLD+  ++S  LS+L Q +LLL +AL ++ S   + + 
Sbjct: 85  LELPVSDWDDKWVDIYLNSSVKLLDICIALSSELSRLDQGQLLLQYALHVLGSESGVPSQ 144

Query: 148 ERMKPIVPKKNFREFEIKAAVR-DRRKGC------------------SGEDWAIERALVT 207
           E++K   P  + RE+     VR  R   C                  S +   + RAL  
Sbjct: 145 EQLKRAEP--SLREWMELVGVRCARLVSCSATLQELAGNLSLMKVKNSAKGKVLMRALYG 204

Query: 208 MEGIGYWVCGIVLSGCEGDSTAYLAARKSAAGVAISSFKSLDSVVLEAVSGK--GSVPEE 255
           +E +  +VC I ++   G     +            +F  L + V E ++ +  G     
Sbjct: 205 IESVTVFVCSIFVAVLSGSPKPLVELHVPEKFGWSQAFNDLHTAVSEELTRQLSGGSVAA 264

[Close]

BLAST of Moc09g05720.1 vs. ExPASy TrEMBL
Match: A0A6J1DLC1 (UPF0496 protein 4-like OS=Momordica charantia OX=3673 GN=LOC111021599 PE=4 SV=1)

HSP 1 Score: 600.5 bits (1547), Expect = 4.0e-168
Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0


Query: 1   MVLLLQTFNKLCSKLDNHHHHHHHRRHGSQASSAASHLQAFESDVSSCLIQFSASSSDSR 60
           MVLLLQTFNKLCSKLDNHHHHHHHRRHGSQASSAASHLQAFESDVSSCLIQFSASSSDSR
Sbjct: 1   MVLLLQTFNKLCSKLDNHHHHHHHRRHGSQASSAASHLQAFESDVSSCLIQFSASSSDSR 60

Query: 61  LLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFS 120
           LLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFS
Sbjct: 61  LLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFS 120

Query: 121 LSQLGQSRLLLSHALGLIQSSPSMAVERMKPIVPKKNFREFEIKAAVRDRRKGCSGEDWA 180
           LSQLGQSRLLLSHALGLIQSSPSMAVERMKPIVPKKNFREFEIKAAVRDRRKGCSGEDWA
Sbjct: 121 LSQLGQSRLLLSHALGLIQSSPSMAVERMKPIVPKKNFREFEIKAAVRDRRKGCSGEDWA 180

Query: 181 IERALVTMEGIGYWVCGIVLSGCEGDSTAYLAARKSAAGVAISSFKSLDSVVLEAVSGKG 240
           IERALVTMEGIGYWVCGIVLSGCEGDSTAYLAARKSAAGVAISSFKSLDSVVLEAVSGKG
Sbjct: 181 IERALVTMEGIGYWVCGIVLSGCEGDSTAYLAARKSAAGVAISSFKSLDSVVLEAVSGKG 240

Query: 241 SVPEEVEELNEAAALVAADLVNGRSGSGGAAEEMRRRSERLEKEVERLRKEVDGRFSEVL 300
           SVPEEVEELNEAAALVAADLVNGRSGSGGAAEEMRRRSERLEKEVERLRKEVDGRFSEVL
Sbjct: 241 SVPEEVEELNEAAALVAADLVNGRSGSGGAAEEMRRRSERLEKEVERLRKEVDGRFSEVL 300

Query: 301 DGRSRLLDVFREGKH 316
           DGRSRLLDVFREGKH
Sbjct: 301 DGRSRLLDVFREGKH 315

[Close]

BLAST of Moc09g05720.1 vs. ExPASy TrEMBL
Match: A0A6J1H7D5 (protein BPS1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111461156 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 8.5e-102
Identity = 210/315 (66.67%), Postives = 247/315 (78.41%), Query Frame = 0


Query: 1   MVLLLQTFNKLCSKLDNHHHHHHHRRHGSQASSAASHLQAFESDVSSCLIQFSASSSDSR 60
           M+LLLQ+FNK CSK     ++HHH RHG++AS + S LQAF+++VSSCL Q   SSSDS 
Sbjct: 1   MLLLLQSFNKHCSKF----YNHHHSRHGNRASFSVSCLQAFDAEVSSCLNQLLLSSSDST 60

Query: 61  LLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFS 120
            LSF WLLQLLQ LP++HQAF KL V+L+ PV +W  DLVDGYLNY+LNLLDLLNSVSFS
Sbjct: 61  TLSFHWLLQLLQALPVLHQAFAKLVVDLDCPVAKWGADLVDGYLNYSLNLLDLLNSVSFS 120

Query: 121 LSQLGQSRLLLSHALGLIQSSPSMAVERMKPIVPKKNFREFEIKAAVRDRRKGCSGEDWA 180
           LSQLG SRL L++AL L++SSP MAV R+KPIV K+NF   E +  V DR+KG S E+WA
Sbjct: 121 LSQLGNSRLSLAYALSLVRSSPLMAVARLKPIVMKRNFMGLENRGIVADRKKGYSSEEWA 180

Query: 181 IERALVTMEGIGYWVCGIVLSGCEGDSTAYLAARKSAAGVAISSFKSLDSVVLEAVSGKG 240
           IERAL TM GIGYWVCG+V+SGCEGDSTAYL  R+ AAGVA+ +FK LDSV    VS KG
Sbjct: 181 IERALATMMGIGYWVCGVVISGCEGDSTAYLEMRRLAAGVAVPAFKELDSV----VSKKG 240

Query: 241 SVPEEVEELNEAAALVAADLVNGRSGSGGAAEEMRRRSERLEKEVERLRKEVDGRFSEVL 300
           +VPEEV+E+N A    A +++    G G AAEEMRRR ERLEK VERL KEVDGRFSEVL
Sbjct: 241 NVPEEVKEVNCA----AKEVIGSGGGDGEAAEEMRRRLERLEKAVERLVKEVDGRFSEVL 300

Query: 301 DGRSRLLDVFREGKH 316
           DGRSRLLD FR+ KH
Sbjct: 301 DGRSRLLDAFRQPKH 303

[Close]

BLAST of Moc09g05720.1 vs. ExPASy TrEMBL
Match: A0A6J1KTC2 (protein BPS1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111498050 PE=4 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 5.5e-101
Identity = 210/315 (66.67%), Postives = 247/315 (78.41%), Query Frame = 0


Query: 1   MVLLLQTFNKLCSKLDNHHHHHHHRRHGSQASSAASHLQAFESDVSSCLIQFSASSSDSR 60
           M+LLLQTFNK CSK     ++HHH RHG++AS + S LQAF+++VSSCL Q    SSDS 
Sbjct: 1   MLLLLQTFNKHCSKF----YNHHHSRHGNRASFSVSLLQAFDAEVSSCLNQLLLLSSDST 60

Query: 61  LLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVSFS 120
            LSF WLLQLLQ LP++H+AF+KL V+L+ PV +W  DLVDGYLNY+LNLLDLLNSVSFS
Sbjct: 61  TLSFHWLLQLLQALPVLHRAFSKLVVDLDCPVAKWGADLVDGYLNYSLNLLDLLNSVSFS 120

Query: 121 LSQLGQSRLLLSHALGLIQSSPSMAVERMKPIVPKKNFREFEIKAAVRDRRKGCSGEDWA 180
           LSQLG SRL L++AL L++SSP MAV R+KPIV K+NF   E +  V DR+K CSGE+WA
Sbjct: 121 LSQLGNSRLSLAYALSLVRSSPLMAVARLKPIVMKRNFVGLENRGIVVDRKKSCSGEEWA 180

Query: 181 IERALVTMEGIGYWVCGIVLSGCEGDSTAYLAARKSAAGVAISSFKSLDSVVLEAVSGKG 240
           IE ALVTM GIGYWVCGIV+SGCEGDSTAYL  R+ AAGV + +FK LDSV    VS KG
Sbjct: 181 IESALVTMMGIGYWVCGIVISGCEGDSTAYLEMRRLAAGVTVPAFKELDSV----VSKKG 240

Query: 241 SVPEEVEELNEAAALVAADLVNGRSGSGGAAEEMRRRSERLEKEVERLRKEVDGRFSEVL 300
           +VPEEV+E+N AA  V     +G  G G AAEEMRRR ERLEK VERL +EVDGRFSE+L
Sbjct: 241 NVPEEVKEVNCAAKEVVG---SGGGGDGEAAEEMRRRLERLEKAVERLVQEVDGRFSEIL 300

Query: 301 DGRSRLLDVFREGKH 316
           DGRSRLLD FR+ KH
Sbjct: 301 DGRSRLLDAFRQPKH 304

[Close]

BLAST of Moc09g05720.1 vs. ExPASy TrEMBL
Match: A0A0A0K882 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G420820 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 9.7e-98
Identity = 205/313 (65.50%), Postives = 244/313 (77.96%), Query Frame = 0


Query: 1   MVLLLQTFNKLCSKLDNHHHHHHHRRHGSQ-ASSAASHLQAFESDVSSCLIQFSASSSDS 60
           M L+LQTFNK CSKLDN H +    RHGS+ AS + S L AFE DVSSC      S+S S
Sbjct: 1   MPLVLQTFNKFCSKLDNRHPN----RHGSKLASFSLSRLHAFEEDVSSCFNHLLLSTSAS 60

Query: 61  RLLSFPWLLQLLQ-TLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVS 120
           + LSF + LQLLQ  LP++H++F KL V+LE+PVG+W  DLVDGY+NYTLNLLDLLNS+S
Sbjct: 61  KPLSFHYFLQLLQGLLPVIHKSFAKLVVDLEYPVGRWRADLVDGYINYTLNLLDLLNSIS 120

Query: 121 FSLSQLGQSRLLLSHALGLIQSSPSMAVERMKPIVPKKNFREFEIKAAVRDRRKGCSGED 180
           FSL+QLG SR+LLS+AL LI+SSP+MAV R+KPIV K+     EIKA V+D +KGCSGE+
Sbjct: 121 FSLTQLGNSRVLLSYALSLIESSPAMAVSRLKPIVLKRYSEGLEIKANVKDLKKGCSGEE 180

Query: 181 WAIERALVTMEGIGYWVCGIVLSGCEGDSTAYLAARKSAAGVAISSFKSLDSVVLEAVSG 240
            AI++AL TMEGIGYWVCGIVLSGCEGDSTAYL  RK A+GV + +FK+LDS++L  VSG
Sbjct: 181 RAIQKALATMEGIGYWVCGIVLSGCEGDSTAYLEMRKLASGVTVPAFKALDSMILAVVSG 240

Query: 241 KGSVPEEVEELNEAAALVAADLVNGRSGSGGAAEEMRRRSERLEKEVERLRKEVDGRFSE 300
           KGSVP+EVEE+N A A+V         G G A EEMR+R  RLEK VE L KEVDGRFSE
Sbjct: 241 KGSVPDEVEEVNVAVAMVV-------DGGGEAVEEMRKRMGRLEKTVEGLGKEVDGRFSE 300

Query: 301 VLDGRSRLLDVFR 312
           VLDGR+RLLDVFR
Sbjct: 301 VLDGRTRLLDVFR 302

[Close]

BLAST of Moc09g05720.1 vs. ExPASy TrEMBL
Match: A0A5D3CEU0 (UPF0496 protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00250 PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 1.6e-95
Identity = 202/313 (64.54%), Postives = 244/313 (77.96%), Query Frame = 0


Query: 1   MVLLLQTFNKLCSKLDNHHHHHHHRRHGSQ-ASSAASHLQAFESDVSSCLIQFSASSSDS 60
           M LLLQTFNK CSKLDN H +    RHGS+ AS + S L AFE DVS+CL     S+S S
Sbjct: 1   MPLLLQTFNKFCSKLDNRHPN----RHGSKLASFSLSRLHAFEDDVSACLNHLLLSTSAS 60

Query: 61  RLLSFPWLLQLLQ-TLPIVHQAFTKLAVNLEHPVGQWPPDLVDGYLNYTLNLLDLLNSVS 120
           + LSF +LLQLLQ  LP +HQ+F KL V+LE+PVG+W  DLVDGYLNY+LNLLDLLNS+S
Sbjct: 61  KPLSFHYLLQLLQGLLPTIHQSFAKLVVDLEYPVGRWRADLVDGYLNYSLNLLDLLNSIS 120

Query: 121 FSLSQLGQSRLLLSHALGLIQSSPSMAVERMKPIVPKKNFREFEIKAAVRDRRKGCSGED 180
           FSL+QLG SR+ LS+AL LIQSSP+MAV R+KPI  K+     EI+  V+D +KGCSGE+
Sbjct: 121 FSLTQLGNSRVSLSYALSLIQSSPAMAVSRLKPIALKRYSEGLEIRGNVKDLKKGCSGEE 180

Query: 181 WAIERALVTMEGIGYWVCGIVLSGCEGDSTAYLAARKSAAGVAISSFKSLDSVVLEAVSG 240
            AIE+AL TMEGIGYW+CGIVLSGCEGD+TAYL  R+ A+GV + +FK+LDSV+   V+G
Sbjct: 181 RAIEKALATMEGIGYWICGIVLSGCEGDATAYLEMRRLASGVTVPAFKALDSVISAVVAG 240

Query: 241 KGSVPEEVEELNEAAALVAADLVNGRSGSGGAAEEMRRRSERLEKEVERLRKEVDGRFSE 300
           KGSVPEEVEE+N     VA +++ G  GSG A EEMR+R  RLEK VE + KEVDGRFSE
Sbjct: 241 KGSVPEEVEEVN-----VAVEMIIG--GSGEAVEEMRKRMGRLEKTVEGMGKEVDGRFSE 300

Query: 301 VLDGRSRLLDVFR 312
           VLDGR+R+LDVFR
Sbjct: 301 VLDGRTRMLDVFR 302

[Close]

BLAST of Moc09g05720.1 vs. TAIR 10
Match: AT1G01550.1 (Protein of unknown function (DUF793) )

HSP 1 Score: 57.0 bits (136), Expect = 3.2e-08
Identity = 34/104 (32.69%), Postives = 57/104 (54.81%), Query Frame = 0


Query: 38  LQAFESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPP 97
           L  FE++++S + +       S +L+  W+ Q +++L   H     L  +LE PV  W  
Sbjct: 36  LNNFETNLASSISKL-VPKEKSDILTVSWMKQAMESLCETHNGIKTLITDLELPVSDWED 95

Query: 98  DLVDGYLNYTLNLLDLLNSVSFSLSQLGQSRLLLSHALGLIQSS 142
             VD YL+ ++ LLDL N+ S  L++L Q  LLL  AL  ++++
Sbjct: 96  KWVDVYLDISVKLLDLCNAFSSELTRLNQGHLLLQFALHNLEAN 138

[Close]

BLAST of Moc09g05720.1 vs. TAIR 10
Match: AT1G01550.2 (Protein of unknown function (DUF793) )

HSP 1 Score: 57.0 bits (136), Expect = 3.2e-08
Identity = 34/104 (32.69%), Postives = 57/104 (54.81%), Query Frame = 0


Query: 38  LQAFESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQWPP 97
           L  FE++++S + +       S +L+  W+ Q +++L   H     L  +LE PV  W  
Sbjct: 36  LNNFETNLASSISKL-VPKEKSDILTVSWMKQAMESLCETHNGIKTLITDLELPVSDWED 95

Query: 98  DLVDGYLNYTLNLLDLLNSVSFSLSQLGQSRLLLSHALGLIQSS 142
             VD YL+ ++ LLDL N+ S  L++L Q  LLL  AL  ++++
Sbjct: 96  KWVDVYLDISVKLLDLCNAFSSELTRLNQGHLLLQFALHNLEAN 138

[Close]

BLAST of Moc09g05720.1 vs. TAIR 10
Match: AT2G46080.1 (CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF793) (TAIR:AT1G01550.2); Has 153 Blast hits to 139 proteins in 20 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 150; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 49.7 bits (117), Expect = 5.1e-06
Identity = 34/105 (32.38%), Postives = 52/105 (49.52%), Query Frame = 0


Query: 36  SHLQAFESDVSSCLIQFSASSSDSRLLSFPWLLQLLQTLPIVHQAFTKLAVNLEHPVGQW 95
           S L  FE  +   L +    + D  +L+  W+   +++L   H+    L  +L+ PV  W
Sbjct: 34  SLLNGFELRLEERLKKLMPKNKDD-ILTLSWMKLAMESLCETHKNINTLITDLQLPVSDW 93

Query: 96  PPDLVDGYLNYTLNLLDLLNSVSFSLSQLGQSRLLLSHALGLIQS 141
               VD YLN ++ LLDL N+ S  L++L Q  L L   L  +QS
Sbjct: 94  EEKWVDVYLNISVRLLDLCNAFSSELTRLNQGDLFLKCVLHNLQS 137

The following BLAST results are available for this feature:

BLAST of Moc09g05720.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154307.1	8.3e-168	100.00	UPF0496 protein 4-like [Momordica charantia]	[more]
XP_038896303.1	1.0e-101	66.46	protein BPS1, chloroplastic-like [Benincasa hispida]	[more]
XP_022960422.1	1.8e-101	66.67	protein BPS1, chloroplastic-like [Cucurbita moschata]	[more]
KAG6593278.1	5.1e-101	66.35	Protein BPS1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7025628.1	8.7e-101	66.35	Protein BPS1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]

BLAST of Moc09g05720.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LMM6	4.5e-07	32.69	Protein BPS1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BPS1 PE=2 SV=1	[more]
A2Z9A6	4.9e-06	25.30	UPF0496 protein 4 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_033149 PE=3 SV=2	[more]
Q337C0	6.5e-06	25.30	UPF0496 protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0513300 PE=2 ...	[more]

BLAST of Moc09g05720.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DLC1	4.0e-168	100.00	UPF0496 protein 4-like OS=Momordica charantia OX=3673 GN=LOC111021599 PE=4 SV=1	[more]
A0A6J1H7D5	8.5e-102	66.67	protein BPS1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111461156 P...	[more]
A0A6J1KTC2	5.5e-101	66.67	protein BPS1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111498050 PE=...	[more]
A0A0A0K882	9.7e-98	65.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G420820 PE=4 SV=1	[more]
A0A5D3CEU0	1.6e-95	64.54	UPF0496 protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4...	[more]

BLAST of Moc09g05720.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01550.1	3.2e-08	32.69	Protein of unknown function (DUF793)	[more]
AT1G01550.2	3.2e-08	32.69	Protein of unknown function (DUF793)	[more]
AT2G46080.1	5.1e-06	32.38	CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Ar...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 271..298
None	No IPR available	PANTHER	PTHR31509:SF13	PROTEIN BPS1, CHLOROPLASTIC-LIKE	coord: 1..314
None	No IPR available	PANTHER	PTHR31509	BPS1-LIKE PROTEIN	coord: 1..314
IPR008511	Protein BYPASS-related	PFAM	PF05633	BPS1	coord: 24..136 e-value: 2.8E-6 score: 26.6

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Moc09g05720	Moc09g05720	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Moc09g05720.1.exon1	Moc09g05720.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Moc09g05720.1	cds.Moc09g05720.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Moc09g05720.1	Moc09g05720.1-protein	polypeptide