Moc08g34510.1 (mRNA) Bitter gourd (OHB3-1) v2

Overview


Name	Moc08g34510.1
Type	mRNA
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Retrotrans_gag domain-containing protein
Location	chr8: 25207749 .. 25210507 (-)
Sequence length	1110
RNA-Seq Expression	Moc08g34510.1
Synteny	Moc08g34510.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTCGTGCAATGCTAATTGCACTTTCAGCAAAAAACAAGGTCGGATTTATCACAGAACTATTGACAAGCCAAAGGATAACATGCTGTCTGCTTGGAAATGCAACAACGATGTCATTATTTTATGGATAATGAACTCTGTATCTCGTGACATTGCTGCTAGTCTCGTCTATTCAGATTCAGCGAGTGACATATGGAATGAACTTCGAGATCGTTTTCAACAGAGTAATGGACCGAGAATTTATCAATTACGAAAGGAATTTGTTACTATAGAGGCTTACTATACAAAACTAAAAACTGTTTGGCAAGAGTTGAGCGAATACCATCTTTCGAACGCTTGTACTTGCGGAGGTTTGAAGCAAGTTTTGAATCATTTCAATTCTGAATATGTCATGATGTTCCTAATGGGACTCAATGAATCCTATGCCGGAGTTCGGGCACAAATCTTGTTTATGGATCCTATGCCTCCTATAAATAAGGTATTCTCTCTTCTAATTCAAGAGGAAAATCATAGGTCTGTTCGTAACATGATCTTTTCTCCAGATTCAATCGCACTTGCTGCTAAGGAAGTATCAAAACGGCCTCAAAATGATCGATTCCGTAAAAAAGAGTTTCAACGCCCTTTCTGTACACACTGCGGGATCAAAGGACACATTATTGAATGTTGCTATAAACTTCATGGTTATCCACCAAGATATAGACAACGCAGCCCTACTCCAACTTCGTCGAATTCTATATCGACTTCTCCTGCTTTATCTTCAGCAGATAAACAAATTCCATCTTAGACCAGTCTTCTAATTGCTCCTCTTAATCAGTCGGCTTTCTTTGCAAGCTTGAGCACTAGTCGATATGGTCAACTAATAGATCTTCTTCACACACATTTATCTGCTGCGAAATCTGAAAGTATTACTGCAATGTCATCCGTGTCTCATGTGGTAGGTACCTATTTCTTTGTTTTATCTGCTCGTTCCCAATCTGATTGTTGGATCATTGATTCTGGAGTCTCAAGTCACATATGTCATTCCAAAGAACTTTTCCACAATCTACTCTGCACTTATAACACATCAGTAATTCTTCCAACGCTCACTCGCGTCAGTGTTGATTATGTTGGAGATGTGTGTATTTCAGCCGGTTTTATACTGAGAGATGTTCTTTTTTGACCATAAATTTACATATAATATGCTGTTTGTCAGCTCCTTACTTGTTTCTGGTGCATACTCTATTATTTTCTCTTCTAGCTATTGTCTCATTCAGGACAAGTTACAATTGAAGATGATTGGTAGGACTGTGTGCTTGAACAGATTATATTTGCTGTCGTGTTCCTCAAATGCTTTCACCAATAATACATATGTTGTCTGTAAGGTTTCTACAACCATTCGTCATCATCGTTTAGGATATCTATCTCCTAAATGTTTAGATTTGTTGAAAGGAACTTTGAACTTTTTTTATTCATGTCATGGTTCTTCTCCATGCCTTATATGCCATTTAGTTAAGCAAAGACGTCTTTTGTTTCCTTCACAAAATAATGTGTTGATTCTATTTTCGACTTAATATATTGCAATGTATGGGATCATTTTCATACACCCTCATATCATGGTCATTCGTATTTTTCGACTCTAGTTTATGATTGCTCACGATTTGCCTGGGTTGATCTTATGAAGCAATCTGATGTTTTTATTATTATCACGTTTTTTTAAACTTGTTGAGACGCAATTTTCTAAAGAAGTGAAGGTGTTTAGATCAGACAATGCTCTTGAACTACAATTCACTGAATTTTTTGCCTCTACAGGTATTATACATCAGTTTTCTTGTGTTGAGCGCCCTAGCAAAATTTCGTAGTTGAACGTAAACATCAGCATTTATTGAATGTTGCTCGTGCTCTGTTTTTTCAGTCCCGAGTACCTATCAAGTTTTGGAGTGATTGTATTTTAACTATTGCGTATATTATTAATCGTACTCCAATGCCATTATTGTCGAATGTTGATCCTTTCACAGTATTATATCATAAGCCTATGGATTATTCATCCTTGCGGGTTTTTGGTTGTTTATGTTATGCTTCAACATTGAGTTCTCATTGCTGAAAATTTGATGTTCGTGCGACTGCTTGTGTTTTTCTATGCTATCCACCGGGGGTCAAAGGGTACAAACTATATGATGTTGTCCAAAGACAGATTTTTATGTCGCGGGATGTTGTGTTCCATGAAGCATATTTTCCTTTTCACTCTATTTTTACTTCGGACACATCTCTGGTAGTTGAGTTTTCTGATTTTGTACTCCCCTACCCTTCACCGAACATGGCTCTTACTGACCCTATGGGATTTTCTAATATCACTACCTCATCCGTACCCTTGAACGGTCCACTTTCTGGTGATGAGGACACTGCTGCTAATACCATTAATGTTGATATTAATTCACCTACTAGGTCGGTTGGCCATAATTCTTCCATTAGTGATATTCTTTTACCCAATACTTCTTCTCATGGTCTCCCACTAGTAGCTTCTGATACACCTAATAATTTAGCTACTGCCTTACTGACTCAATTGTGCAGCCTTTTAATGTGCAGCCATTTGAACCTTCTACTGAGCTTCGGCGTTCTCAACGTGCACGCTACCCACCTGGTTTTTTACGAGATTACCATTGCAATCTCTTATCTTCTTCTCCAGCTATTTTTGGGTCTTTCATTCCCCATCCTCTTGAGAATTATCTTTCATACAAAGACTTCTCAGCTGCACATCGTCAAACTCAAAGTCATTGCTGA

mRNA sequence

ATGGAGTCGTGCAATGCTAATTGCACTTTCAGCAAAAAACAAGGTCGGATTTATCACAGAACTATTGACAAGCCAAAGGATAACATGCTGTCTGCTTGGAAATGCAACAACGATGTCATTATTTTATGGATAATGAACTCTGTATCTCGTGACATTGCTGCTAGTCTCGTCTATTCAGATTCAGCGAGTGACATATGGAATGAACTTCGAGATCGTTTTCAACAGAGTAATGGACCGAGAATTTATCAATTACGAAAGGAATTTGTTACTATAGAGGCTTACTATACAAAACTAAAAACTGTTTGGCAAGAGTTGAGCGAATACCATCTTTCGAACGCTTGTACTTGCGGAGGTTTGAAGCAAGTTTTGAATCATTTCAATTCTGAATATGTCATGATGTTCCTAATGGGACTCAATGAATCCTATGCCGGAGTTCGGGCACAAATCTTGTTTATGGATCCTATGCCTCCTATAAATAAGTCGGCTTTCTTTGCAAGCTTGAGCACTAGTCGATATGGTCAACTAATAGATCTTCTTCACACACATTTATCTGCTGCGAAATCTGAAAGTATTACTGCAATGTCATCCGTGTCTCATGTGGACAAGTTACAATTGAAGATGATTGGTAGGACTGTGTGCTTGAACAGATTATATTTGCTGTCGTGTTCCTCAAATGCTTTCACCAATAATACATATGTTGTCTTTGAGTTTTCTGATTTTGTACTCCCCTACCCTTCACCGAACATGGCTCTTACTGACCCTATGGGATTTTCTAATATCACTACCTCATCCGTACCCTTGAACGGTCCACTTTCTGGTGATGAGGACACTGCTGCTAATACCATTAATGTTGATATTAATTCACCTACTAGCTACTGCCTTACTGACTCAATTGTGCAGCCTTTTAATGTGCAGCCATTTGAACCTTCTACTGAGCTTCGGCGTTCTCAACGTGCACGCTACCCACCTGGTTTTTTACGAGATTACCATTGCAATCTCTTATCTTCTTCTCCAGCTATTTTTGGGTCTTTCATTCCCCATCCTCTTGAGAATTATCTTTCATACAAAGACTTCTCAGCTGCACATCGTCAAACTCAAAGTCATTGCTGA

Coding sequence (CDS)

ATGGAGTCGTGCAATGCTAATTGCACTTTCAGCAAAAAACAAGGTCGGATTTATCACAGAACTATTGACAAGCCAAAGGATAACATGCTGTCTGCTTGGAAATGCAACAACGATGTCATTATTTTATGGATAATGAACTCTGTATCTCGTGACATTGCTGCTAGTCTCGTCTATTCAGATTCAGCGAGTGACATATGGAATGAACTTCGAGATCGTTTTCAACAGAGTAATGGACCGAGAATTTATCAATTACGAAAGGAATTTGTTACTATAGAGGCTTACTATACAAAACTAAAAACTGTTTGGCAAGAGTTGAGCGAATACCATCTTTCGAACGCTTGTACTTGCGGAGGTTTGAAGCAAGTTTTGAATCATTTCAATTCTGAATATGTCATGATGTTCCTAATGGGACTCAATGAATCCTATGCCGGAGTTCGGGCACAAATCTTGTTTATGGATCCTATGCCTCCTATAAATAAGTCGGCTTTCTTTGCAAGCTTGAGCACTAGTCGATATGGTCAACTAATAGATCTTCTTCACACACATTTATCTGCTGCGAAATCTGAAAGTATTACTGCAATGTCATCCGTGTCTCATGTGGACAAGTTACAATTGAAGATGATTGGTAGGACTGTGTGCTTGAACAGATTATATTTGCTGTCGTGTTCCTCAAATGCTTTCACCAATAATACATATGTTGTCTTTGAGTTTTCTGATTTTGTACTCCCCTACCCTTCACCGAACATGGCTCTTACTGACCCTATGGGATTTTCTAATATCACTACCTCATCCGTACCCTTGAACGGTCCACTTTCTGGTGATGAGGACACTGCTGCTAATACCATTAATGTTGATATTAATTCACCTACTAGCTACTGCCTTACTGACTCAATTGTGCAGCCTTTTAATGTGCAGCCATTTGAACCTTCTACTGAGCTTCGGCGTTCTCAACGTGCACGCTACCCACCTGGTTTTTTACGAGATTACCATTGCAATCTCTTATCTTCTTCTCCAGCTATTTTTGGGTCTTTCATTCCCCATCCTCTTGAGAATTATCTTTCATACAAAGACTTCTCAGCTGCACATCGTCAAACTCAAAGTCATTGCTGA

Protein sequence

MESCNANCTFSKKQGRIYHRTIDKPKDNMLSAWKCNNDVIILWIMNSVSRDIAASLVYSDSASDIWNELRDRFQQSNGPRIYQLRKEFVTIEAYYTKLKTVWQELSEYHLSNACTCGGLKQVLNHFNSEYVMMFLMGLNESYAGVRAQILFMDPMPPINKSAFFASLSTSRYGQLIDLLHTHLSAAKSESITAMSSVSHVDKLQLKMIGRTVCLNRLYLLSCSSNAFTNNTYVVFEFSDFVLPYPSPNMALTDPMGFSNITTSSVPLNGPLSGDEDTAANTINVDINSPTSYCLTDSIVQPFNVQPFEPSTELRRSQRARYPPGFLRDYHCNLLSSSPAIFGSFIPHPLENYLSYKDFSAAHRQTQSHC

Homology

[Close]

BLAST of Moc08g34510.1 vs. NCBI nr
Match: XP_022155284.1 (uncharacterized protein LOC111022420 [Momordica charantia])

HSP 1 Score: 335.9 bits (860), Expect = 4.5e-88
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MESCNANCTFSKKQGRIYHRTIDKPKDNMLSAWKCNNDVIILWIMNSVSRDIAASLVYSD 60
           MESCNANCTFSKKQGRIYHRTIDKPKDNMLSAWKCNNDVIILWIMNSVSRDIAASLVYSD
Sbjct: 1   MESCNANCTFSKKQGRIYHRTIDKPKDNMLSAWKCNNDVIILWIMNSVSRDIAASLVYSD 60

Query: 61  SASDIWNELRDRFQQSNGPRIYQLRKEFVTIEAYYTKLKTVWQELSEYHLSNACTCGGLK 120
           SASDIWNELRDRFQQSNGPRIYQLRKEFVTIEAYYTKLKTVWQELSEYHLSNACTCGGLK
Sbjct: 61  SASDIWNELRDRFQQSNGPRIYQLRKEFVTIEAYYTKLKTVWQELSEYHLSNACTCGGLK 120

Query: 121 QVLNHFNSEYVMMFLMGLNESYAGVRAQILFMDPMPPINK 161
           QVLNHFNSEYVMMFLMGLNESYAGVRAQILFMDPMPPINK
Sbjct: 121 QVLNHFNSEYVMMFLMGLNESYAGVRAQILFMDPMPPINK 160

[Close]

BLAST of Moc08g34510.1 vs. NCBI nr
Match: XP_022145891.1 (uncharacterized protein LOC111015239 [Momordica charantia])

HSP 1 Score: 205.7 bits (522), Expect = 7.0e-49
Identity = 97/147 (65.99%), Postives = 118/147 (80.27%), Query Frame = 0


Query: 21  TIDKPKDNMLSAWKCNNDVIILWIMNSVSRDIAASLVYSDSASDIWNELRDRFQQSNGPR 80
           TI KP  N+L+AWKCNND+I  WI+NSVS++IAAS++Y+ SA DIW+EL++RFQQS+ PR
Sbjct: 74  TIKKPNGNLLAAWKCNNDIITSWIINSVSKEIAASIIYTGSAKDIWDELKERFQQSDAPR 133

Query: 81  IYQLRKEFVT-------IEAYYTKLKTVWQELSEYHLSNACTCGGLKQVLNHFNSEYVMM 140
           I+QLRKE VT       IEAYYTKLKTVWQEL++Y  +  CTC GLK +   F SEYVM 
Sbjct: 134 IFQLRKELVTTIQGTLSIEAYYTKLKTVWQELTDYRPTIDCTCSGLKSLSEFFQSEYVMT 193

Query: 141 FLMGLNESYAGVRAQILFMDPMPPINK 161
           FLMGLNESYA +RAQIL MDP+PP+NK
Sbjct: 194 FLMGLNESYAKIRAQILLMDPIPPMNK 220

[Close]

BLAST of Moc08g34510.1 vs. NCBI nr
Match: KAA0065480.1 (Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa] >TYK08721.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa])

HSP 1 Score: 195.7 bits (496), Expect = 7.2e-46
Identity = 92/146 (63.01%), Postives = 111/146 (76.03%), Query Frame = 0


Query: 22  IDKPKDN-MLSAWKCNNDVIILWIMNSVSRDIAASLVYSDSASDIWNELRDRFQQSNGPR 81
           I KP D  +L AW CNND++  WI+NSVS++IAAS++Y  S  +IW+ELR RF+QSNGP 
Sbjct: 76  IQKPSDGVLLDAWICNNDILASWILNSVSKEIAASIIYIGSIKEIWDELRQRFKQSNGPS 135

Query: 82  IYQLRKEFV-------TIEAYYTKLKTVWQELSEYHLSNACTCGGLKQVLNHFNSEYVMM 141
           IYQLRKEFV       TIE YYTKLKT+WQ L+EY  +N CTCGGLK  ++H  SEY+M 
Sbjct: 136 IYQLRKEFVTLRQGNLTIETYYTKLKTIWQNLNEYRFTNDCTCGGLKPFIDHLESEYIMA 195

Query: 142 FLMGLNESYAGVRAQILFMDPMPPIN 160
           FLMGLN+SYA VRAQIL M P+P IN
Sbjct: 196 FLMGLNDSYAAVRAQILLMQPLPSIN 221

[Close]

BLAST of Moc08g34510.1 vs. NCBI nr
Match: KAA8543184.1 (hypothetical protein F0562_021321 [Nyssa sinensis])

HSP 1 Score: 193.7 bits (491), Expect = 2.7e-45
Identity = 134/407 (32.92%), Postives = 211/407 (51.84%), Query Frame = 0


Query: 27  DNMLSAWKCNNDVIILWIMNSVSRDIAASLVYSDSASDIWNELRDRFQQSNGPRIYQLRK 86
           +N+L++W  NN+++I WI+NSVS++I+AS++++ SA +IW +LRDRFQQ N PRI+QL++
Sbjct: 84  NNLLNSWIRNNNIVISWILNSVSKEISASIIFAASAREIWLDLRDRFQQRNRPRIFQLKR 143

Query: 87  EFV-------TIEAYYTKLKTVWQELSEYHLS---NACTCGGLKQVLNHFNSEYVMMFLM 146
           E +       ++  Y+TKLKT+W+ELS Y L+     C+CGG+K + +H   EY+M FLM
Sbjct: 144 ELMNLHQEQSSVSIYFTKLKTIWEELSNYRLNCSCGKCSCGGVKNLNDHHQMEYIMSFLM 203

Query: 147 GLNESYAGVRAQILFMDPMPPIN------------KSAFFASLSTSRYGQLIDLLHTHLS 206
           GL++S++ VR Q+L MDPMPPIN            +    +S S++  G +   + T ++
Sbjct: 204 GLDDSFSQVRGQLLLMDPMPPINRVFSLIVQEEQQRRTNSSSDSSNSTGTMAFAVKTDVA 263

Query: 207 ----AAKSESITAMSSVSHVDK------LQLKMIGRTVCLNRLYLL-------------- 266
               +    S  + SS S   K      +  K++G TV  +R Y +              
Sbjct: 264 KSGGSGSQNSQNSNSSASKNQKRDRLYCMHCKILGHTV--DRCYKIHGYPPGYKFKSNNN 323

Query: 267 --------------SCSSNAFTNNTYVVFEFSDFVLPYPSPNMALTDPMGFSNI----TT 326
                         S  SN+F +   V   F D VLP+ S        +  S++     T
Sbjct: 324 FNAAAHQVSTSDDRSDQSNSFGDQ--VTDPFPDLVLPHSSLQAHFIPDLASSHVHDPPVT 383

Query: 327 SSVPLNGPLSGDEDTAANTINVDINSPTSYCLTDSIVQPFNVQP-FEPSTE----LRRSQ 365
           S VP + P+    D+ +  +     SP+S   T +   P +  P   PS      LR+  
Sbjct: 384 SGVPADLPID-RPDSNSPIVFSSGPSPSSVASTSATNIPVDDIPGITPSPSGGVVLRKFT 443

[Close]

BLAST of Moc08g34510.1 vs. NCBI nr
Match: KAA8519610.1 (hypothetical protein F0562_013945 [Nyssa sinensis])

HSP 1 Score: 179.5 bits (454), Expect = 5.3e-41
Identity = 124/408 (30.39%), Postives = 209/408 (51.23%), Query Frame = 0


Query: 27   DNMLSAWKCNNDVIILWIMNSVSRDIAASLVYSDSASDIWNELRDRFQQSNGPRIYQLRK 86
            +N+L++W  NN+++I WI+NSVS++I+AS++++ SA +IW +LRDRFQQ NGPRI+QL++
Sbjct: 760  NNLLNSWIRNNNIVISWILNSVSKEISASIIFAASAREIWLDLRDRFQQRNGPRIFQLKR 819

Query: 87   EFV-------TIEAYYTKLKTVWQELSEYHLSNAC-TC--GGLKQVLNHFNSEYVMMFLM 146
            E +       ++  Y+TKLKT+W++LS Y  + +C  C  G +K + +H   EY+M FLM
Sbjct: 820  ELMNLRQEQSSVSIYFTKLKTIWEKLSNYRPNCSCGKCFGGEVKNLNDHHQMEYIMSFLM 879

Query: 147  GLNESYAGVRAQILFMDPMPPINKSAFFA-----------------SLSTSRYGQLIDLL 206
            GL++S++ VR Q+L MDPMPPIN   F                   S  T  +    D+ 
Sbjct: 880  GLDDSFSQVRGQLLLMDPMPPINHVFFLIVQEEQQRRTNPSSDSSNSTGTMAFAVKTDVA 939

Query: 207  HTHLSAAKSESITAMSSVSHVDK-----LQLKMIGRTVCLNRLYLL-------------- 266
             ++ S +++   +  S+  +  +        K++G TV  +R Y +              
Sbjct: 940  KSNGSGSQNSQNSNFSASKNQKRDRPYCTHCKILGHTV--DRCYKIHGYPPGYKFRSNNN 999

Query: 267  --------------SCSSNAFTNNTYVVFEFSDFVLPYPSPNMALTDPMGFSNI----TT 326
                          S  SN+F +   V+  F + VLP+ S        + FS++     T
Sbjct: 1000 SNVAAHQVSTFDDRSDQSNSFGDQ--VIDPFPNLVLPHSSLQAHFIPDLAFSHVHDPPVT 1059

Query: 327  SSVPLNGPLSGDEDTAANTINVDINSPT-----SYCLTDSIVQPFNVQPFEP--STELRR 364
            S VP + P+   +   +N++ V  + P+     S    + +V   +     P  S  L++
Sbjct: 1060 SGVPADLPIDCHD---SNSLMVSSSGPSPSGVASTSAANILVDDISAIAPSPSGSVVLKK 1119

[Close]

BLAST of Moc08g34510.1 vs. ExPASy TrEMBL
Match: A0A6J1DPT8 (uncharacterized protein LOC111022420 OS=Momordica charantia OX=3673 GN=LOC111022420 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 2.2e-88
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MESCNANCTFSKKQGRIYHRTIDKPKDNMLSAWKCNNDVIILWIMNSVSRDIAASLVYSD 60
           MESCNANCTFSKKQGRIYHRTIDKPKDNMLSAWKCNNDVIILWIMNSVSRDIAASLVYSD
Sbjct: 1   MESCNANCTFSKKQGRIYHRTIDKPKDNMLSAWKCNNDVIILWIMNSVSRDIAASLVYSD 60

Query: 61  SASDIWNELRDRFQQSNGPRIYQLRKEFVTIEAYYTKLKTVWQELSEYHLSNACTCGGLK 120
           SASDIWNELRDRFQQSNGPRIYQLRKEFVTIEAYYTKLKTVWQELSEYHLSNACTCGGLK
Sbjct: 61  SASDIWNELRDRFQQSNGPRIYQLRKEFVTIEAYYTKLKTVWQELSEYHLSNACTCGGLK 120

Query: 121 QVLNHFNSEYVMMFLMGLNESYAGVRAQILFMDPMPPINK 161
           QVLNHFNSEYVMMFLMGLNESYAGVRAQILFMDPMPPINK
Sbjct: 121 QVLNHFNSEYVMMFLMGLNESYAGVRAQILFMDPMPPINK 160

[Close]

BLAST of Moc08g34510.1 vs. ExPASy TrEMBL
Match: A0A6J1CXR2 (uncharacterized protein LOC111015239 OS=Momordica charantia OX=3673 GN=LOC111015239 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 3.4e-49
Identity = 97/147 (65.99%), Postives = 118/147 (80.27%), Query Frame = 0


Query: 21  TIDKPKDNMLSAWKCNNDVIILWIMNSVSRDIAASLVYSDSASDIWNELRDRFQQSNGPR 80
           TI KP  N+L+AWKCNND+I  WI+NSVS++IAAS++Y+ SA DIW+EL++RFQQS+ PR
Sbjct: 74  TIKKPNGNLLAAWKCNNDIITSWIINSVSKEIAASIIYTGSAKDIWDELKERFQQSDAPR 133

Query: 81  IYQLRKEFVT-------IEAYYTKLKTVWQELSEYHLSNACTCGGLKQVLNHFNSEYVMM 140
           I+QLRKE VT       IEAYYTKLKTVWQEL++Y  +  CTC GLK +   F SEYVM 
Sbjct: 134 IFQLRKELVTTIQGTLSIEAYYTKLKTVWQELTDYRPTIDCTCSGLKSLSEFFQSEYVMT 193

Query: 141 FLMGLNESYAGVRAQILFMDPMPPINK 161
           FLMGLNESYA +RAQIL MDP+PP+NK
Sbjct: 194 FLMGLNESYAKIRAQILLMDPIPPMNK 220

[Close]

BLAST of Moc08g34510.1 vs. ExPASy TrEMBL
Match: A0A5A7VE66 (Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold76G00250 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 3.5e-46
Identity = 92/146 (63.01%), Postives = 111/146 (76.03%), Query Frame = 0


Query: 22  IDKPKDN-MLSAWKCNNDVIILWIMNSVSRDIAASLVYSDSASDIWNELRDRFQQSNGPR 81
           I KP D  +L AW CNND++  WI+NSVS++IAAS++Y  S  +IW+ELR RF+QSNGP 
Sbjct: 76  IQKPSDGVLLDAWICNNDILASWILNSVSKEIAASIIYIGSIKEIWDELRQRFKQSNGPS 135

Query: 82  IYQLRKEFV-------TIEAYYTKLKTVWQELSEYHLSNACTCGGLKQVLNHFNSEYVMM 141
           IYQLRKEFV       TIE YYTKLKT+WQ L+EY  +N CTCGGLK  ++H  SEY+M 
Sbjct: 136 IYQLRKEFVTLRQGNLTIETYYTKLKTIWQNLNEYRFTNDCTCGGLKPFIDHLESEYIMA 195

Query: 142 FLMGLNESYAGVRAQILFMDPMPPIN 160
           FLMGLN+SYA VRAQIL M P+P IN
Sbjct: 196 FLMGLNDSYAAVRAQILLMQPLPSIN 221

[Close]

BLAST of Moc08g34510.1 vs. ExPASy TrEMBL
Match: A0A5J5BKC2 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_021321 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.3e-45
Identity = 134/407 (32.92%), Postives = 211/407 (51.84%), Query Frame = 0


Query: 27  DNMLSAWKCNNDVIILWIMNSVSRDIAASLVYSDSASDIWNELRDRFQQSNGPRIYQLRK 86
           +N+L++W  NN+++I WI+NSVS++I+AS++++ SA +IW +LRDRFQQ N PRI+QL++
Sbjct: 84  NNLLNSWIRNNNIVISWILNSVSKEISASIIFAASAREIWLDLRDRFQQRNRPRIFQLKR 143

Query: 87  EFV-------TIEAYYTKLKTVWQELSEYHLS---NACTCGGLKQVLNHFNSEYVMMFLM 146
           E +       ++  Y+TKLKT+W+ELS Y L+     C+CGG+K + +H   EY+M FLM
Sbjct: 144 ELMNLHQEQSSVSIYFTKLKTIWEELSNYRLNCSCGKCSCGGVKNLNDHHQMEYIMSFLM 203

Query: 147 GLNESYAGVRAQILFMDPMPPIN------------KSAFFASLSTSRYGQLIDLLHTHLS 206
           GL++S++ VR Q+L MDPMPPIN            +    +S S++  G +   + T ++
Sbjct: 204 GLDDSFSQVRGQLLLMDPMPPINRVFSLIVQEEQQRRTNSSSDSSNSTGTMAFAVKTDVA 263

Query: 207 ----AAKSESITAMSSVSHVDK------LQLKMIGRTVCLNRLYLL-------------- 266
               +    S  + SS S   K      +  K++G TV  +R Y +              
Sbjct: 264 KSGGSGSQNSQNSNSSASKNQKRDRLYCMHCKILGHTV--DRCYKIHGYPPGYKFKSNNN 323

Query: 267 --------------SCSSNAFTNNTYVVFEFSDFVLPYPSPNMALTDPMGFSNI----TT 326
                         S  SN+F +   V   F D VLP+ S        +  S++     T
Sbjct: 324 FNAAAHQVSTSDDRSDQSNSFGDQ--VTDPFPDLVLPHSSLQAHFIPDLASSHVHDPPVT 383

Query: 327 SSVPLNGPLSGDEDTAANTINVDINSPTSYCLTDSIVQPFNVQP-FEPSTE----LRRSQ 365
           S VP + P+    D+ +  +     SP+S   T +   P +  P   PS      LR+  
Sbjct: 384 SGVPADLPID-RPDSNSPIVFSSGPSPSSVASTSATNIPVDDIPGITPSPSGGVVLRKFT 443

[Close]

BLAST of Moc08g34510.1 vs. ExPASy TrEMBL
Match: A0A5J4ZLU4 (RING-type E3 ubiquitin transferase OS=Nyssa sinensis OX=561372 GN=F0562_013945 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 2.6e-41
Identity = 124/408 (30.39%), Postives = 209/408 (51.23%), Query Frame = 0


Query: 27   DNMLSAWKCNNDVIILWIMNSVSRDIAASLVYSDSASDIWNELRDRFQQSNGPRIYQLRK 86
            +N+L++W  NN+++I WI+NSVS++I+AS++++ SA +IW +LRDRFQQ NGPRI+QL++
Sbjct: 760  NNLLNSWIRNNNIVISWILNSVSKEISASIIFAASAREIWLDLRDRFQQRNGPRIFQLKR 819

Query: 87   EFV-------TIEAYYTKLKTVWQELSEYHLSNAC-TC--GGLKQVLNHFNSEYVMMFLM 146
            E +       ++  Y+TKLKT+W++LS Y  + +C  C  G +K + +H   EY+M FLM
Sbjct: 820  ELMNLRQEQSSVSIYFTKLKTIWEKLSNYRPNCSCGKCFGGEVKNLNDHHQMEYIMSFLM 879

Query: 147  GLNESYAGVRAQILFMDPMPPINKSAFFA-----------------SLSTSRYGQLIDLL 206
            GL++S++ VR Q+L MDPMPPIN   F                   S  T  +    D+ 
Sbjct: 880  GLDDSFSQVRGQLLLMDPMPPINHVFFLIVQEEQQRRTNPSSDSSNSTGTMAFAVKTDVA 939

Query: 207  HTHLSAAKSESITAMSSVSHVDK-----LQLKMIGRTVCLNRLYLL-------------- 266
             ++ S +++   +  S+  +  +        K++G TV  +R Y +              
Sbjct: 940  KSNGSGSQNSQNSNFSASKNQKRDRPYCTHCKILGHTV--DRCYKIHGYPPGYKFRSNNN 999

Query: 267  --------------SCSSNAFTNNTYVVFEFSDFVLPYPSPNMALTDPMGFSNI----TT 326
                          S  SN+F +   V+  F + VLP+ S        + FS++     T
Sbjct: 1000 SNVAAHQVSTFDDRSDQSNSFGDQ--VIDPFPNLVLPHSSLQAHFIPDLAFSHVHDPPVT 1059

Query: 327  SSVPLNGPLSGDEDTAANTINVDINSPT-----SYCLTDSIVQPFNVQPFEP--STELRR 364
            S VP + P+   +   +N++ V  + P+     S    + +V   +     P  S  L++
Sbjct: 1060 SGVPADLPIDCHD---SNSLMVSSSGPSPSGVASTSAANILVDDISAIAPSPSGSVVLKK 1119

[Close]

BLAST of Moc08g34510.1 vs. TAIR 10
Match: AT1G21280.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 84.0 bits (206), Expect = 2.8e-16
Identity = 48/151 (31.79%), Postives = 77/151 (50.99%), Query Frame = 0


Query: 25  PKDNMLSAWKCNNDVIILWIMNSVSRDIAASLVYSDSASDIWNELRDRFQQSNGPRIYQL 84
           P   +   W+  N +++ W+MNS++  +  S++Y+++A  +W +LR  F      +IYQL
Sbjct: 71  PFSPLYQPWEQCNAMVMYWLMNSMTDKLLESVMYAETAHKMWEDLRRVFVPCVDLKIYQL 130

Query: 85  RKEFVT-------IEAYYTKLKTVWQELSEYHLSNACTCGG-----LKQVLNHFNSEYVM 144
           R+   T       +E Y+ KL  VW ELSEY     C CGG      K+       E   
Sbjct: 131 RRRLATLRQGGDSVEEYFGKLSKVWMELSEYAPIPECKCGGCNCECTKRAEEAREKEQRY 190

Query: 145 MFLMG--LNESYAGVRAQILFMDPMPPINKS 162
            FLMG  LN+ +  V  +I+F  P P ++++
Sbjct: 191 EFLMGLKLNQGFEAVTTKIMFQKPPPSLHEA 221

The following BLAST results are available for this feature:

BLAST of Moc08g34510.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155284.1	4.5e-88	100.00	uncharacterized protein LOC111022420 [Momordica charantia]	[more]
XP_022145891.1	7.0e-49	65.99	uncharacterized protein LOC111015239 [Momordica charantia]	[more]
KAA0065480.1	7.2e-46	63.01	Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa] >T...	[more]
KAA8543184.1	2.7e-45	32.92	hypothetical protein F0562_021321 [Nyssa sinensis]	[more]
KAA8519610.1	5.3e-41	30.39	hypothetical protein F0562_013945 [Nyssa sinensis]	[more]

BLAST of Moc08g34510.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc08g34510.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DPT8	2.2e-88	100.00	uncharacterized protein LOC111022420 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1CXR2	3.4e-49	65.99	uncharacterized protein LOC111015239 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A5A7VE66	3.5e-46	63.01	Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa O...	[more]
A0A5J5BKC2	1.3e-45	32.92	Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_021321 PE=4 SV=1	[more]
A0A5J4ZLU4	2.6e-41	30.39	RING-type E3 ubiquitin transferase OS=Nyssa sinensis OX=561372 GN=F0562_013945 P...	[more]

BLAST of Moc08g34510.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21280.1	2.8e-16	31.79	CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Ha...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 42..140 e-value: 1.5E-7 score: 31.6
None	No IPR available	PANTHER	PTHR34222	FAMILY NOT NAMED	coord: 32..161
None	No IPR available	PANTHER	PTHR34222:SF6	OS02G0671800 PROTEIN	coord: 32..161

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Moc08g34510	Moc08g34510	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Moc08g34510.1.exon5	Moc08g34510.1.exon5	exon
Moc08g34510.1.exon4	Moc08g34510.1.exon4	exon
Moc08g34510.1.exon3	Moc08g34510.1.exon3	exon
Moc08g34510.1.exon2	Moc08g34510.1.exon2	exon
Moc08g34510.1.exon1	Moc08g34510.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Moc08g34510.1	cds.Moc08g34510.1_5	CDS
cds.Moc08g34510.1	cds.Moc08g34510.1_4	CDS
cds.Moc08g34510.1	cds.Moc08g34510.1_3	CDS
cds.Moc08g34510.1	cds.Moc08g34510.1_2	CDS
cds.Moc08g34510.1	cds.Moc08g34510.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Moc08g34510.1	Moc08g34510.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044260	cellular macromolecule metabolic process
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0044238	primary metabolic process
molecular_function	GO:0005488	binding
molecular_function	GO:0016740	transferase activity