Moc07g05320.1 (mRNA) Bitter gourd (OHB3-1) v2

Overview
NameMoc07g05320.1
TypemRNA
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr7: 4466786 .. 4469458 (+)
Sequence length228
RNA-Seq ExpressionMoc07g05320.1
SyntenyMoc07g05320.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGACTTTGTGGTGGCGTTGATATCTATATTGAACAGGTGTCTTCAAAGGTATGTATCACTAACTTCTTGTTATTCATGCTTATGTGTTTTTTCTTTGTTGCAATTCTAAAACAAGATCGAAGCACACGAGCTCGCGCGCTTCCTCTGCGGGATCCGATCCCTTCACAAATATGATCAAGTACCAAATCTTTTACATGTTTTGCTTTCCCTATGTCATCTTCTCTGTAGCAAGACCATTTATCACTAATAACCATTACTTGCAAACCGCTTTTATTTAGCTTGAATCTTTTAAGCATAATGATCGTGGAGGAAAAGCGTGTTTCTGCTATGGAAAGTAACTTCAAAGATACAAACTCATTGAACATAGCAAGCCTCATGGAATGATTTATTATCAAATTATTTACCACTAGAAATTTCATAAATCCAACCACTTTCATTAAATACATCTTCATTACCTTCAATATTTCTTGCAGCACAAATATTCTTCAAAGCAAGATTGAGAGCGTGAACTACACATGGCGTCCATACTATGTTTGAGAATTGCGACTCAATAATTTGTCCTGCAGCTTTACAATTAGGAGCATTATCAGTGATTAGTTGGATGACATTCTGATGTGTCACTTCATTAATGACTTCTTTCATCAAATTCGCTATGAAATGTTTATCTTTAATCTCACCAAAGAAATCTACAGCTTTAAGAAACATTGGTCCTCCTTCAGTAATTGCCATGAAATTTATTAAAGGGCTTCTTTGAGAATCTCTTCATCCATCACTGACAATACTTACTCCCTTTGTACTCCATGTGCTTTTGATAGGTTGCAACAATCTTTCAATATTAGCCTTTTCTCTTTGAAGAAGTGTTGTTCTCAACATATTACCCCGGAGGTATATAACCCGTCAACGTATTATTTGCAGCAAACATAAATGCATTAACATAATGTAGATTTCTAGCCAAATGAAAATGCAAGCCTGAGCAATAAAACATCCTAGCAAATTGTGCATGCAAAGGATCACGGGTTGCCATATTAAATGACTTTTCAAGAGCACTAGTACTACATTTTCTTTTCTTTTGTTCCATGGCGGAAAAAGAATAGCTACTTGTATTTCCAAAAAATTGAGATTGGGTATGGTTGGAAGGTGGCAAATGAACTTTTCTTTGGAGCATTCTTGTGGCTTTTAAGTTTTACTTCATCTTCCAATTACTTTTGCATTTCAACAACATCCTTAGCGGTAACTTTCCAACACATTCCAATTCCATAACTACTTAATTTTATTAGGTGAGCCCTAACTCTAGTATAAGAACTTTTCTTAATTTCTTGACAAAAATTGCATTGCCAAGAAATATTACCTCCTCTTTCATTTAACCTTTGATTTTTTGTCACATACCGCCACAATGGTTTTGTTTCATCTTTATTATTGTTGGAATTTGTTGAAAGTATTTCATTTTGACTAGAAGAATGACTCAATCCTAAACAAAGATACACAAAAAAAACAAAAAAAAATAAAAAAAATGTACATTAACAGAGAAAATCAACCAACCACTTTATACAAGAAAAAAAAACAAATACATACCTTAAAAAGAAAAATGAGTGACTGTATTAATACTACCAGCCACCAGTTGTGGAGGAAATAGAACCAAAGAAAGTATTGAACTGCCGAAGAGAACTAAAGAAGCCGCTGATGAAAAATGAAGAAGAAAAATCAAGCGTGGAGAAGAAGAAACATTGCGCGTGGAGAAGAAGAAACGGAGAAGGAGGGAGGGAACGAGTTTTGAATAAATGCAATAACCTAATTCTAATTCTTTTAATTAAAAATAAAAACTTTAAAAGATAAGTGGACTGATTATAGTTCTTAAGAAACATGAATAAATATGGGCTTTGGGCTTAAAAGCCCAAAAGATTAGAGTTAAAAAATTGGGCTTAATACGTGTCCTCCAGCGTGCCGGCAACGTGTCGGCAACTAGGGGTGTTCAAAAAACCCAGTGACCCGAGCAACCCGAACAACCCAACCCAAACCGTAAGGGTTGGGTTGGGTTAGAAATTTTTTCAAGTTGAGTTGGGTTGATTTTTGTAAGAACAAAAAATTTGGTTCGGTTCACGGGTTAAATGAATTTTTGGCCCGTTCAACCCGAATCGAATTGAACCCAACATATATGTTATAAAGAAACCCCAGTCGCCTACCTTGTCTCCCTCTTCCTCCCCTTCCCTCTTCCTTCCGTCATCTCCATTTCCATTCTCTCATCTCCCTTCGTCTTCATCTCTTCTTTCACTATTGATCTCTTATTCTCACCTCTTCCACAAATCTCATATACTAATCTCGCAACTCTTTACCTCGTCGTTTGTTATTTGCCGTCGCACGCTACTTCCCATCACCGTTTGCTGCTATCCATTGCTAGATCTACTGTTGTTTATTGTTGTTCGTTGTGTTACTGTTCATCGCTACTCACTGCTAGATATGCTGTTGCTCATCATAGTTTTTTGTTGTCCTTGCCAGATCGGCTGCCGTTCGTCGTTGTTTGCTGCCATCCGCGCCAGATCTGTTGCCGTTCGTCGCCGTCTGCTGCCGTCCACCGCCAGATCTGCTGCCGTTCATCGCCGTCTGCAGCCGTCCACCAGATCTAGTACTCGTCGCCAACCCAGTAACCCAACTCAACCCAACCCGAAAATATAG

mRNA sequence

ATGAGACTTTGTGGTGGCGTTGATATCTATATTGAACAGGTGTCTTCAAAGATCGGCTGCCGTTCGTCGTTGTTTGCTGCCATCCGCGCCAGATCTGTTGCCGTTCGTCGCCGTCTGCTGCCGTCCACCGCCAGATCTGCTGCCGTTCATCGCCGTCTGCAGCCGTCCACCAGATCTAGTACTCGTCGCCAACCCAGTAACCCAACTCAACCCAACCCGAAAATATAG

Coding sequence (CDS)

ATGAGACTTTGTGGTGGCGTTGATATCTATATTGAACAGGTGTCTTCAAAGATCGGCTGCCGTTCGTCGTTGTTTGCTGCCATCCGCGCCAGATCTGTTGCCGTTCGTCGCCGTCTGCTGCCGTCCACCGCCAGATCTGCTGCCGTTCATCGCCGTCTGCAGCCGTCCACCAGATCTAGTACTCGTCGCCAACCCAGTAACCCAACTCAACCCAACCCGAAAATATAG

Protein sequence

MRLCGGVDIYIEQVSSKIGCRSSLFAAIRARSVAVRRRLLPSTARSAAVHRRLQPSTRSSTRRQPSNPTQPNPKI
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..69

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Moc07g05320Moc07g05320gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Moc07g05320.1.exon1Moc07g05320.1.exon1exon
Moc07g05320.1.exon2Moc07g05320.1.exon2exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Moc07g05320.1cds.Moc07g05320.1CDS
cds.Moc07g05320.1cds.Moc07g05320.1_2CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Moc07g05320.1Moc07g05320.1-proteinpolypeptide