Moc06g29650.1 (mRNA) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g29650.1
Type	mRNA
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	LOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Location	chr6: 22357490 .. 22359945 (-)
Sequence length	1902
RNA-Seq Expression	Moc06g29650.1
Synteny	Moc06g29650.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGTTCATCTTCCTCCAAGCCACACGACAATGAGAAGGAAAAGAAGATAGTGTTGTTGCATCCATCAACCAAACCGGGTATGATTCCTCTTGAACCTCCTAGGATTTCTCATGAAAAATTAATTTTTGATTCTAGGGAACAAAGAAGAAAATATGAGGAAGCTATAAGAATGAACCCTAAGAGAAATCTATCCATAGGTGTTACAAATTTTGAAAAAATCAATATGGAATCTCATGATGCTAGGGTTAATAAAGAAGGTTCTAGTGAAAAGAAATTAGGAGGTGTTAATAAAGTTTATCATCGAAAAAATCAATCTCTAGAGGAAAAAGGTGCTGTTTTAGATGAGGAAATAGCTAGACTTCAAGAGAGAGCGGAGATGTTCAGTAAAAATAACGAAATTAGGGATAAAGAGAATGAGAGGGTTTATGCGAAAATTGAGGAATTAAACATGAAATGGCGAGAATTCATGGAAAATTCAAAGAAAGTGAGTGAGGACATTCAACTTGAGTTAAATAGCATGAGTATACGTCGTAGGATGAATTTTTCTTAAGATAACCCCGTTTCCGAGTCTTTAGAACTGTCTATCCCTCCCCCTCTTTCCACTACTGTTGCTATGCATGTTGAAGGTTAAGAACAGGTTAGTGGGGACCCAGAACACGACACGGAGCCCTTGGAGCATTCAGATTCGGCCACGGTCGAAATTCAACGCCAAATTGCGCCTGGCGCAATTATGGATGAAACTCCACCGGCCACTCTACAAGGTATTTTGTCTCCATCTTTTCCAGATCCTATCTTGACTAAAAAGCCCCTAGTTTTTGTTGATTCAGAACAGGAAAGGACAACTTCGAAAATTGTCGAAATTTTGGTAGTGTTGAATGAAGCAAGGGGAGAAGATCCTTTAGAGGATGATGGAAACAGTGGGGCAGTACAAGGACAATTGAATGTTGATGGAGATGATGAAGATCTTGGAGAATTACCCCAAGAAGTGCATGGAGATGAGTTTGAGGACGAAGAAGACAATGACGATATCTCTCAATGTGAAGTGAGAGTACGAACTCCAGTGCACGAATCTCAGCAAGTTGATGAGGAGCCCCCTGCAAAAGAGCAAGAAGGAACATCCGGTCCTGTGGATGTCTCTAGTAAGGCCATAGAGGAATCATTTTCCTTTTCTTCACAAGGTAAAACCCCTTCTTTGTCGAGTTTGAATGTTTCTGACCCAAACTTTGTTGCTACTGCAGAGACTTCAGATGAGGAGGTGAGTTTGACCAAAGTGGTAAAGAAAACACAAAAGAAGAAAAAAGTGGCCCAGGACCCGCGCCGCTGTAGCACGTTTGGCGGCCCAAAAAGAACCCGAGGTTGGTCCATCTAAAAAACCCAAGAGGGCTAGGGTACAAAGAGGGGTAGAAGAGCCACTTGAGGAGGCCAACGAAGAGGAGCCCGATTCTACCGAACAAACACCATCAAGAGTAAAAAGGGTAAGATTGGAGGTGAGGAGACCTACTTCACAACAAGTGATATCCTCCTTGAAAGAGGTTTTGATGAGACCCAAGAGTCGGTGCTAGAATATGTTAGGAGGAGGCTTGTGGAGAATGGTTGGGAGGCGTTGTTTGCCCCAACTACACGTGTATCAGAGGCCTTGGTGAAAGAGTTTTACACTGCCATCAACCCAAACCGAGGGGATGTAGTGAGAGTACGGGGTAAAGTGGTAAAATTCTCGCCTTCCATTATTAATACTCACTATGGTTTGTTAGATGTTCTTAATGGCATAGGTAATGAAATTTTGGTGCATCCATCGGACGAGCAAGTGGAGGAGGCACGTAGGCTTATTTGTAGACCATATAAGACATGGATCGTCTCAACCACGGGGAAGCTTTCCTTAATGACCCTTGACATTAATGAGCAAGCGACGGTTTGGATGTATGTGGTGAAGAATTTGTTGATCCTCACTTCTCACGATTCCTCCATTAAGCGTAATAGGGCGATGATGGTGTACATTCTCATGAAGGGCGTTGAGTTCAACTTTAGCGAACTCATAAGAAACGAGATACGGAGTTGCTCCGAGAAAATGGTAGGTCATCTTGTTTTCCTAGACTAATAACTGAGTTATGCTTGCAGACGGGAGTGGCGGCTGATGATGCCAATGTTGTGGTGCCCAAGAAGCCGTTCACATCCCTAAGAATAGTTCGGGGGTATTCCATTGTTCGAGAGGAAGATTCTCCCATTACCGAAGCGGATCCCTAGACCCGAGGGGTGGTAACTAGGGAGCAGTATGATGAGCTTAGGCACAAGTATGAGCTTCTTTTGGTTACTCAACGTGCCACATGTGCTTTCCTTAAGAAGATATACGATGATGAAGCACCTTCATTCCCCGATGAACTTGTGGTCGACTTACCATCTTCTTCCCATTTTCCTACCGATTCCACCAACGATGAGTCTTCCGATGATGAGTAG

mRNA sequence

ATGGAAGGTTCATCTTCCTCCAAGCCACACGACAATGAGAAGGAAAAGAAGATAGTGTTGTTGCATCCATCAACCAAACCGGGTATGATTCCTCTTGAACCTCCTAGGATTTCTCATGAAAAATTAATTTTTGATTCTAGGGAACAAAGAAGAAAATATGAGGAAGCTATAAGAATGAACCCTAAGAGAAATCTATCCATAGGTGTTACAAATTTTGAAAAAATCAATATGGAATCTCATGATGCTAGGGTTAATAAAGAAGGTTCTAGTGAAAAGAAATTAGGAGGTGTTAATAAAGTTTATCATCGAAAAAATCAATCTCTAGAGGAAAAAGGTGCTGTTTTAGATGAGGAAATAGCTAGACTTCAAGAGAGAGCGGAGATGTTCAGTAAAAATAACGAAATTAGGGATAAAGAGAATGAGAGGGTTTATGCGAAAATTGAGGAATTAAACATGAAATGGCGAGAATTCATGGAAAATTCAAAGAAAGTTAGTGGGGACCCAGAACACGACACGGAGCCCTTGGAGCATTCAGATTCGGCCACGGTCGAAATTCAACGCCAAATTGCGCCTGGCGCAATTATGGATGAAACTCCACCGGCCACTCTACAAGGTATTTTGTCTCCATCTTTTCCAGATCCTATCTTGACTAAAAAGCCCCTAGTTTTTGTTGATTCAGAACAGGAAAGGACAACTTCGAAAATTGTCGAAATTTTGGTAGTGTTGAATGAAGCAAGGGGAGAAGATCCTTTAGAGGATGATGGAAACAGTGGGGCAGTACAAGGACAATTGAATGTTGATGGAGATGATGAAGATCTTGGAGAATTACCCCAAGAAGTGCATGGAGATGAGTTTGAGGACGAAGAAGACAATGACGATATCTCTCAATGTGAAGTGAGAGTACGAACTCCAGTGCACGAATCTCAGCAAGTTGATGAGGAGCCCCCTGCAAAAGAGCAAGAAGGAACATCCGGTCCTGTGGATGTCTCTAGTAAGGCCATAGAGGAATCATTTTCCTTTTCTTCACAAGGTAAAACCCCTTCTTTGTCGAGTTTGAATGTTTCTGACCCAAACTTTGTTGCTACTGCAGAGACTTCAGATGAGGAGGTGAGTTTGACCAAAGTGGGTAAGATTGGAGGTGAGGAGACCTACTTCACAACAAGTGATATCCTCCTTGAAAGAGGTTTTGATGAGACCCAAGAGTCGGTGCTAGAATATGTTAGGAGGAGGCTTGTGGAGAATGGTTGGGAGGCGTTGTTTGCCCCAACTACACGTGTATCAGAGGCCTTGGTGAAAGAGTTTTACACTGCCATCAACCCAAACCGAGGGGATGTAGTGAGAGTACGGGGTAAAGTGGTAAAATTCTCGCCTTCCATTATTAATACTCACTATGGTTTGTTAGATGTTCTTAATGGCATAGGTAATGAAATTTTGGTGCATCCATCGGACGAGCAAGTGGAGGAGGCACGTAGGCTTATTTGTAGACCATATAAGACATGGATCGTCTCAACCACGGGGAAGCTTTCCTTAATGACCCTTGACATTAATGAGCAAGCGACGGTTTGGATGTATGTGGTGAAGAATTTGTTGATCCTCACTTCTCACGATTCCTCCATTAAGCGTAATAGGGCGATGATGACGGGAGTGGCGGCTGATGATGCCAATGTTGTGGTGCCCAAGAAGCCGTTCACATCCCTAAGAATAGTTCGGGGGGAGCAGTATGATGAGCTTAGGCACAAGTATGAGCTTCTTTTGGTTACTCAACGTGCCACATGTGCTTTCCTTAAGAAGATATACGATGATGAAGCACCTTCATTCCCCGATGAACTTGTGGTCGACTTACCATCTTCTTCCCATTTTCCTACCGATTCCACCAACGATGAGTCTTCCGATGATGAGTAG

Coding sequence (CDS)

ATGGAAGGTTCATCTTCCTCCAAGCCACACGACAATGAGAAGGAAAAGAAGATAGTGTTGTTGCATCCATCAACCAAACCGGGTATGATTCCTCTTGAACCTCCTAGGATTTCTCATGAAAAATTAATTTTTGATTCTAGGGAACAAAGAAGAAAATATGAGGAAGCTATAAGAATGAACCCTAAGAGAAATCTATCCATAGGTGTTACAAATTTTGAAAAAATCAATATGGAATCTCATGATGCTAGGGTTAATAAAGAAGGTTCTAGTGAAAAGAAATTAGGAGGTGTTAATAAAGTTTATCATCGAAAAAATCAATCTCTAGAGGAAAAAGGTGCTGTTTTAGATGAGGAAATAGCTAGACTTCAAGAGAGAGCGGAGATGTTCAGTAAAAATAACGAAATTAGGGATAAAGAGAATGAGAGGGTTTATGCGAAAATTGAGGAATTAAACATGAAATGGCGAGAATTCATGGAAAATTCAAAGAAAGTTAGTGGGGACCCAGAACACGACACGGAGCCCTTGGAGCATTCAGATTCGGCCACGGTCGAAATTCAACGCCAAATTGCGCCTGGCGCAATTATGGATGAAACTCCACCGGCCACTCTACAAGGTATTTTGTCTCCATCTTTTCCAGATCCTATCTTGACTAAAAAGCCCCTAGTTTTTGTTGATTCAGAACAGGAAAGGACAACTTCGAAAATTGTCGAAATTTTGGTAGTGTTGAATGAAGCAAGGGGAGAAGATCCTTTAGAGGATGATGGAAACAGTGGGGCAGTACAAGGACAATTGAATGTTGATGGAGATGATGAAGATCTTGGAGAATTACCCCAAGAAGTGCATGGAGATGAGTTTGAGGACGAAGAAGACAATGACGATATCTCTCAATGTGAAGTGAGAGTACGAACTCCAGTGCACGAATCTCAGCAAGTTGATGAGGAGCCCCCTGCAAAAGAGCAAGAAGGAACATCCGGTCCTGTGGATGTCTCTAGTAAGGCCATAGAGGAATCATTTTCCTTTTCTTCACAAGGTAAAACCCCTTCTTTGTCGAGTTTGAATGTTTCTGACCCAAACTTTGTTGCTACTGCAGAGACTTCAGATGAGGAGGTGAGTTTGACCAAAGTGGGTAAGATTGGAGGTGAGGAGACCTACTTCACAACAAGTGATATCCTCCTTGAAAGAGGTTTTGATGAGACCCAAGAGTCGGTGCTAGAATATGTTAGGAGGAGGCTTGTGGAGAATGGTTGGGAGGCGTTGTTTGCCCCAACTACACGTGTATCAGAGGCCTTGGTGAAAGAGTTTTACACTGCCATCAACCCAAACCGAGGGGATGTAGTGAGAGTACGGGGTAAAGTGGTAAAATTCTCGCCTTCCATTATTAATACTCACTATGGTTTGTTAGATGTTCTTAATGGCATAGGTAATGAAATTTTGGTGCATCCATCGGACGAGCAAGTGGAGGAGGCACGTAGGCTTATTTGTAGACCATATAAGACATGGATCGTCTCAACCACGGGGAAGCTTTCCTTAATGACCCTTGACATTAATGAGCAAGCGACGGTTTGGATGTATGTGGTGAAGAATTTGTTGATCCTCACTTCTCACGATTCCTCCATTAAGCGTAATAGGGCGATGATGACGGGAGTGGCGGCTGATGATGCCAATGTTGTGGTGCCCAAGAAGCCGTTCACATCCCTAAGAATAGTTCGGGGGGAGCAGTATGATGAGCTTAGGCACAAGTATGAGCTTCTTTTGGTTACTCAACGTGCCACATGTGCTTTCCTTAAGAAGATATACGATGATGAAGCACCTTCATTCCCCGATGAACTTGTGGTCGACTTACCATCTTCTTCCCATTTTCCTACCGATTCCACCAACGATGAGTCTTCCGATGATGAGTAG

Protein sequence

MEGSSSSKPHDNEKEKKIVLLHPSTKPGMIPLEPPRISHEKLIFDSREQRRKYEEAIRMNPKRNLSIGVTNFEKINMESHDARVNKEGSSEKKLGGVNKVYHRKNQSLEEKGAVLDEEIARLQERAEMFSKNNEIRDKENERVYAKIEELNMKWREFMENSKKVSGDPEHDTEPLEHSDSATVEIQRQIAPGAIMDETPPATLQGILSPSFPDPILTKKPLVFVDSEQERTTSKIVEILVVLNEARGEDPLEDDGNSGAVQGQLNVDGDDEDLGELPQEVHGDEFEDEEDNDDISQCEVRVRTPVHESQQVDEEPPAKEQEGTSGPVDVSSKAIEESFSFSSQGKTPSLSSLNVSDPNFVATAETSDEEVSLTKVGKIGGEETYFTTSDILLERGFDETQESVLEYVRRRLVENGWEALFAPTTRVSEALVKEFYTAINPNRGDVVRVRGKVVKFSPSIINTHYGLLDVLNGIGNEILVHPSDEQVEEARRLICRPYKTWIVSTTGKLSLMTLDINEQATVWMYVVKNLLILTSHDSSIKRNRAMMTGVAADDANVVVPKKPFTSLRIVRGEQYDELRHKYELLLVTQRATCAFLKKIYDDEAPSFPDELVVDLPSSSHFPTDSTNDESSDDE

Homology

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BLAST of Moc06g29650.1 vs. NCBI nr
Match: XP_022154847.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia])

HSP 1 Score: 446.0 bits (1146), Expect = 5.2e-121
Identity = 271/458 (59.17%), Postives = 291/458 (63.54%), Query Frame = 0


Query: 263  QLNVDGDDEDLGELPQEVHGDEFEDEEDNDDISQCEVRVRTPVHESQQVDEEPPAKEQEG 322
            QLNVD +DED GELPQEVHGDEFEDEEDNDDISQ EV+VRTPVHESQQVDEEPP KEQEG
Sbjct: 970  QLNVDREDEDFGELPQEVHGDEFEDEEDNDDISQYEVKVRTPVHESQQVDEEPPTKEQEG 1029

Query: 323  TSGPVDVSSKAIEESFSFSSQGKT---------------------PS------------- 382
            TSGPVDV S+A+EES S SSQG                       PS             
Sbjct: 1030 TSGPVDVPSEAMEESSSSSSQGAVSRPRTRTAVARLAAQKEAEAGPSKKAKTARVQRVAE 1089

Query: 383  --LSSLNVSDPNFVATAETSDEEVSLTKVGKIGGEETYFTTSDILLERGFDETQESVLEY 442
              L   N  +P      +++++  S  K  ++      FTT DILLERGFDE QE V EY
Sbjct: 1090 EPLEEANEEEP------DSTEQTPSRVKRVRLEVRRPTFTTRDILLERGFDEAQEPVPEY 1149

Query: 443  VRRRLVENGWEALFAPTTRVSEALVKEFYTAINPNRGDVVRVRGKVVKFSPSIINTHYGL 502
            VR+R+VENGWE LFAP TRVSEALVKEFYTAINPNRGD VRVR                 
Sbjct: 1150 VRKRIVENGWETLFAPITRVSEALVKEFYTAINPNRGDEVRVR----------------- 1209

Query: 503  LDVLNGIGNEILVHPSDEQVEEARRLICRPYKTWIVSTTGKLSLMTLDINEQATVWMYVV 562
                   GNEILVHPSDEQVEEARRLICRP+KTW +ST GKLSL  LDINEQATVWMYVV
Sbjct: 1210 -------GNEILVHPSDEQVEEARRLICRPHKTWTISTMGKLSLKPLDINEQATVWMYVV 1269

Query: 563  KNLLILTSHDSSIKRNRAM---------------------------MTGVAADDANVVVP 622
            KN LI TS+DSSIKRNRAM                           + GV A DANVV+P
Sbjct: 1270 KNRLIPTSYDSSIKRNRAMIVYILVKGVEFNFGELIRNEIQSCSEKLAGVEAADANVVMP 1329

Query: 623  KKPFTSLRIVRG------------------------EQYDELRHKYELLLVTQRATCAFL 634
            KKPF SLR VRG                        EQYDELRHKYELLLVTQRATCAFL
Sbjct: 1330 KKPFRSLRKVRGYSIVREEDSPITAADPETRGVVTREQYDELRHKYELLLVTQRATCAFL 1389

[Close]

BLAST of Moc06g29650.1 vs. NCBI nr
Match: XP_022158483.1 (uncharacterized protein LOC111024964 [Momordica charantia])

HSP 1 Score: 225.3 bits (573), Expect = 1.5e-54
Identity = 177/450 (39.33%), Postives = 219/450 (48.67%), Query Frame = 0


Query: 1   MEGSSSSKPHDNEKEKKIVLLHPSTKPGMIPLEPPRISHEKLIFDSREQRRKYEEAIRMN 60
           MEGSS SKP D E EKK V+L P       P+ P                          
Sbjct: 53  MEGSSFSKPCDKENEKKKVILPP-------PIPP-------------------------- 112

Query: 61  PKRNLSIGVTNFEKINMESHDARVNKEGSSEKKLGGVNKVYHRKNQSLEEKGAVLDEEIA 120
                            E H ARVN+ G SEKKL G +KVY RKNQS+ +K + LDE IA
Sbjct: 113 -----------------EPHVARVNEGGYSEKKLEGFSKVYLRKNQSVGDKDSDLDERIA 172

Query: 121 RLQERAEMFSKNNEIRDKENERVYAKIEELNMKWREFMENSKKVSGDPEHDTEPLEHSDS 180
           R+ E+ ++ +K  EI DK+NE + AKI ELN KW+ FMENS+++S               
Sbjct: 173 RINEKVDIENKEREIWDKKNEVICAKIAELNKKWQRFMENSRRMS--------------- 232

Query: 181 ATVEIQRQIAPGAIMDETPPATLQGILSPSFPDPILTKKPLVFVDSEQERTTSKIVEILV 240
              EIQ ++                                    +EQERTTSKI +ILV
Sbjct: 233 --EEIQIEL------------------------------------NEQERTTSKITKILV 292

Query: 241 VLNEARGEDPLEDDGNSGAVQGQLNVDGDDEDLGELPQEVHGDEFEDEEDNDDISQCEVR 300
            LNEA GEDPLEDDGNS   QG+LNVDG+DEDLG+LPQEVHGDE E+EE+NDDISQ EVR
Sbjct: 293 ALNEATGEDPLEDDGNSREAQGRLNVDGEDEDLGDLPQEVHGDECEEEEENDDISQYEVR 341

Query: 301 VRTPVHESQQVDEEPPAKEQEGTSGPVDVSSKAIEESFSFSSQGKTPSLSSLNVSDPNFV 360
           +   VHESQ+   E P +  EG S PVDV ++A  +S S SS  K  S   +N  +P   
Sbjct: 353 IHILVHESQRDKNEAPIRVHEGASDPVDVPNEATGQSSSSSS--KDNSKEEVNEEEPT-- 341

Query: 361 ATAETSDEEVSLTKVGKIGGEETYFTTSDILLERGFDETQESVLEYVRRRLVENGWEALF 420
               +++++ S  K                                              
Sbjct: 413 ----STEQQASKAK---------------------------------------------- 341

Query: 421 APTTRVSEALVKEFYTAINPNRGDVVRVRG 451
               RV EALVKEFY AI+PN+GD VRVRG
Sbjct: 473 ----RVLEALVKEFYAAIHPNQGDAVRVRG 341

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BLAST of Moc06g29650.1 vs. NCBI nr
Match: XP_022156935.1 (uncharacterized protein LOC111023761 [Momordica charantia])

HSP 1 Score: 149.4 bits (376), Expect = 1.0e-31
Identity = 104/215 (48.37%), Postives = 114/215 (53.02%), Query Frame = 0


Query: 163 KVSGDPEHDTEPLEHSDSATVEIQRQIAPGAIMDETPPATLQGILSPSFPDPILTKKPLV 222
           +VSGD EHD EPLEHSDSATV+I+ QIAP  IM ETPPATLQ                  
Sbjct: 179 EVSGDSEHDMEPLEHSDSATVKIECQIAPSTIMVETPPATLQ------------------ 238

Query: 223 FVDSEQERTTSKIVEILVVLNEARGEDPLEDDGNSGAVQGQLNVDGDDEDLGELPQEVHG 282
                         E+LV LNEARGEDPL+DDGNSG                        
Sbjct: 239 --------------EVLVALNEARGEDPLKDDGNSG------------------------ 298

Query: 283 DEFEDEEDNDDISQCEVRVRTPVHESQQVDEEPPAKEQEGTSGPVDVSSKAIEESFSFSS 342
                                      Q DEEP A+EQEGTSGP+DV S+A+EES S  S
Sbjct: 299 ---------------------------QDDEEPLAQEQEGTSGPIDVHSEAMEESSSSYS 310

Query: 343 QGKTPSLSSLNVSDPNFVATAETSDEEVSLTKVGK 378
           Q KT SLSSLNVSDPNFVATAE SDEEV+L KV K
Sbjct: 359 QSKTSSLSSLNVSDPNFVATAEISDEEVNLIKVVK 310

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BLAST of Moc06g29650.1 vs. NCBI nr
Match: XP_022156786.1 (uncharacterized protein LOC111023620 [Momordica charantia])

HSP 1 Score: 145.6 bits (366), Expect = 1.5e-30
Identity = 97/222 (43.69%), Postives = 115/222 (51.80%), Query Frame = 0


Query: 305 VHESQQVDEEPPAKEQEGTSGPVDVSSKAIEESFSFSSQGKTPSLSSLNVSDPNFVATAE 364
           +HESQQ DEE   +EQEG SG VDV ++A+EES S SS+GK+PSLSSLNVSDPNFVA A 
Sbjct: 1   MHESQQDDEESHVQEQEGASGLVDVPNEALEESSSSSSKGKSPSLSSLNVSDPNFVAIAY 60

Query: 365 TSDEEVSLTKVGK----------------------------------------------- 424
           TS+E+V LTKV K                                               
Sbjct: 61  TSEEKVCLTKVVKKARNKKNLDEIVPGANSRPCTRATIASLAAQKEAEAGPFKKAKRVKG 120

Query: 425 ----------IGGEE--------------------TYFTTSDILLERGFDETQESVLEYV 450
                     +  EE                      FT  +IL+E+GFDE QE V +Y+
Sbjct: 121 LRRSEEPLDEVNDEELDSIEQTPSKAKRVRWEVKRVNFTAREILVEKGFDEAQEPVPKYI 180

[Close]

BLAST of Moc06g29650.1 vs. NCBI nr
Match: XP_022141932.1 (uncharacterized protein LOC111012188 [Momordica charantia])

HSP 1 Score: 121.7 bits (304), Expect = 2.3e-23
Identity = 107/303 (35.31%), Postives = 139/303 (45.87%), Query Frame = 0


Query: 75  INMESHDARVNKEGSSEKKLGGVNKVYHRKNQSLEEKGAVLDEEIARLQERAEMFSKNNE 134
           + +E H AR+N+   +EKKL   +KVY RKNQ + + G+ LDE I  + ER +  +K  E
Sbjct: 1   MTLEPHIARINEGDHTEKKLEEFSKVYLRKNQPMGDTGSDLDERIGMINERVDTKNKKME 60

Query: 135 IRDKENERVYAKIEELNMKWREFMENSKKVSGDPEHDTEPLEHSDSATVEIQRQIAPGAI 194
           IRDKENE + AKI ELN KW+ FMENS+++S                             
Sbjct: 61  IRDKENEVICAKIAELNEKWQRFMENSRRMS----------------------------- 120

Query: 195 MDETPPATLQGILSPSFPDPILTKKPLVFVDSEQERTTSKIVEILVVLNEARGEDPLEDD 254
                                                     EI + L+E          
Sbjct: 121 -----------------------------------------EEIQIELDELY-------- 180

Query: 255 GNSGAVQGQLNVDGDDEDLGELPQEVHGDEFEDEEDNDDISQCEVRVRTPVHESQQVDEE 314
                          DEDLG+LPQEV  +E E+EE+N+DISQ +             +EE
Sbjct: 181 ---------------DEDLGDLPQEV-TNECEEEEENNDISQYD-------------EEE 196

Query: 315 PPAKEQEGTSGPVDVSSKAIEESFSFSSQGKTPSLSSLNVSDPNFVATAETSDEEVSLTK 374
            P + QEG S P DV ++A +ES S SS+  T S SSLNV DPNFVA AE S+EE  LTK
Sbjct: 241 APVQVQEGASSPKDVPNEATKESSSSSSKDMTHSFSSLNVFDPNFVAVAENSEEEACLTK 196

Query: 375 VGK 378
             K
Sbjct: 301 QRK 196

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BLAST of Moc06g29650.1 vs. ExPASy TrEMBL
Match: A0A6J1DMT3 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 OS=Momordica charantia OX=3673 GN=LOC111022007 PE=4 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 2.5e-121
Identity = 271/458 (59.17%), Postives = 291/458 (63.54%), Query Frame = 0


Query: 263  QLNVDGDDEDLGELPQEVHGDEFEDEEDNDDISQCEVRVRTPVHESQQVDEEPPAKEQEG 322
            QLNVD +DED GELPQEVHGDEFEDEEDNDDISQ EV+VRTPVHESQQVDEEPP KEQEG
Sbjct: 970  QLNVDREDEDFGELPQEVHGDEFEDEEDNDDISQYEVKVRTPVHESQQVDEEPPTKEQEG 1029

Query: 323  TSGPVDVSSKAIEESFSFSSQGKT---------------------PS------------- 382
            TSGPVDV S+A+EES S SSQG                       PS             
Sbjct: 1030 TSGPVDVPSEAMEESSSSSSQGAVSRPRTRTAVARLAAQKEAEAGPSKKAKTARVQRVAE 1089

Query: 383  --LSSLNVSDPNFVATAETSDEEVSLTKVGKIGGEETYFTTSDILLERGFDETQESVLEY 442
              L   N  +P      +++++  S  K  ++      FTT DILLERGFDE QE V EY
Sbjct: 1090 EPLEEANEEEP------DSTEQTPSRVKRVRLEVRRPTFTTRDILLERGFDEAQEPVPEY 1149

Query: 443  VRRRLVENGWEALFAPTTRVSEALVKEFYTAINPNRGDVVRVRGKVVKFSPSIINTHYGL 502
            VR+R+VENGWE LFAP TRVSEALVKEFYTAINPNRGD VRVR                 
Sbjct: 1150 VRKRIVENGWETLFAPITRVSEALVKEFYTAINPNRGDEVRVR----------------- 1209

Query: 503  LDVLNGIGNEILVHPSDEQVEEARRLICRPYKTWIVSTTGKLSLMTLDINEQATVWMYVV 562
                   GNEILVHPSDEQVEEARRLICRP+KTW +ST GKLSL  LDINEQATVWMYVV
Sbjct: 1210 -------GNEILVHPSDEQVEEARRLICRPHKTWTISTMGKLSLKPLDINEQATVWMYVV 1269

Query: 563  KNLLILTSHDSSIKRNRAM---------------------------MTGVAADDANVVVP 622
            KN LI TS+DSSIKRNRAM                           + GV A DANVV+P
Sbjct: 1270 KNRLIPTSYDSSIKRNRAMIVYILVKGVEFNFGELIRNEIQSCSEKLAGVEAADANVVMP 1329

Query: 623  KKPFTSLRIVRG------------------------EQYDELRHKYELLLVTQRATCAFL 634
            KKPF SLR VRG                        EQYDELRHKYELLLVTQRATCAFL
Sbjct: 1330 KKPFRSLRKVRGYSIVREEDSPITAADPETRGVVTREQYDELRHKYELLLVTQRATCAFL 1389

[Close]

BLAST of Moc06g29650.1 vs. ExPASy TrEMBL
Match: A0A6J1DW79 (uncharacterized protein LOC111024964 OS=Momordica charantia OX=3673 GN=LOC111024964 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 7.0e-55
Identity = 177/450 (39.33%), Postives = 219/450 (48.67%), Query Frame = 0


Query: 1   MEGSSSSKPHDNEKEKKIVLLHPSTKPGMIPLEPPRISHEKLIFDSREQRRKYEEAIRMN 60
           MEGSS SKP D E EKK V+L P       P+ P                          
Sbjct: 53  MEGSSFSKPCDKENEKKKVILPP-------PIPP-------------------------- 112

Query: 61  PKRNLSIGVTNFEKINMESHDARVNKEGSSEKKLGGVNKVYHRKNQSLEEKGAVLDEEIA 120
                            E H ARVN+ G SEKKL G +KVY RKNQS+ +K + LDE IA
Sbjct: 113 -----------------EPHVARVNEGGYSEKKLEGFSKVYLRKNQSVGDKDSDLDERIA 172

Query: 121 RLQERAEMFSKNNEIRDKENERVYAKIEELNMKWREFMENSKKVSGDPEHDTEPLEHSDS 180
           R+ E+ ++ +K  EI DK+NE + AKI ELN KW+ FMENS+++S               
Sbjct: 173 RINEKVDIENKEREIWDKKNEVICAKIAELNKKWQRFMENSRRMS--------------- 232

Query: 181 ATVEIQRQIAPGAIMDETPPATLQGILSPSFPDPILTKKPLVFVDSEQERTTSKIVEILV 240
              EIQ ++                                    +EQERTTSKI +ILV
Sbjct: 233 --EEIQIEL------------------------------------NEQERTTSKITKILV 292

Query: 241 VLNEARGEDPLEDDGNSGAVQGQLNVDGDDEDLGELPQEVHGDEFEDEEDNDDISQCEVR 300
            LNEA GEDPLEDDGNS   QG+LNVDG+DEDLG+LPQEVHGDE E+EE+NDDISQ EVR
Sbjct: 293 ALNEATGEDPLEDDGNSREAQGRLNVDGEDEDLGDLPQEVHGDECEEEEENDDISQYEVR 341

Query: 301 VRTPVHESQQVDEEPPAKEQEGTSGPVDVSSKAIEESFSFSSQGKTPSLSSLNVSDPNFV 360
           +   VHESQ+   E P +  EG S PVDV ++A  +S S SS  K  S   +N  +P   
Sbjct: 353 IHILVHESQRDKNEAPIRVHEGASDPVDVPNEATGQSSSSSS--KDNSKEEVNEEEPT-- 341

Query: 361 ATAETSDEEVSLTKVGKIGGEETYFTTSDILLERGFDETQESVLEYVRRRLVENGWEALF 420
               +++++ S  K                                              
Sbjct: 413 ----STEQQASKAK---------------------------------------------- 341

Query: 421 APTTRVSEALVKEFYTAINPNRGDVVRVRG 451
               RV EALVKEFY AI+PN+GD VRVRG
Sbjct: 473 ----RVLEALVKEFYAAIHPNQGDAVRVRG 341

[Close]

BLAST of Moc06g29650.1 vs. ExPASy TrEMBL
Match: A0A6J1DRR9 (uncharacterized protein LOC111023761 OS=Momordica charantia OX=3673 GN=LOC111023761 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 4.9e-32
Identity = 104/215 (48.37%), Postives = 114/215 (53.02%), Query Frame = 0


Query: 163 KVSGDPEHDTEPLEHSDSATVEIQRQIAPGAIMDETPPATLQGILSPSFPDPILTKKPLV 222
           +VSGD EHD EPLEHSDSATV+I+ QIAP  IM ETPPATLQ                  
Sbjct: 179 EVSGDSEHDMEPLEHSDSATVKIECQIAPSTIMVETPPATLQ------------------ 238

Query: 223 FVDSEQERTTSKIVEILVVLNEARGEDPLEDDGNSGAVQGQLNVDGDDEDLGELPQEVHG 282
                         E+LV LNEARGEDPL+DDGNSG                        
Sbjct: 239 --------------EVLVALNEARGEDPLKDDGNSG------------------------ 298

Query: 283 DEFEDEEDNDDISQCEVRVRTPVHESQQVDEEPPAKEQEGTSGPVDVSSKAIEESFSFSS 342
                                      Q DEEP A+EQEGTSGP+DV S+A+EES S  S
Sbjct: 299 ---------------------------QDDEEPLAQEQEGTSGPIDVHSEAMEESSSSYS 310

Query: 343 QGKTPSLSSLNVSDPNFVATAETSDEEVSLTKVGK 378
           Q KT SLSSLNVSDPNFVATAE SDEEV+L KV K
Sbjct: 359 QSKTSSLSSLNVSDPNFVATAEISDEEVNLIKVVK 310

[Close]

BLAST of Moc06g29650.1 vs. ExPASy TrEMBL
Match: A0A6J1DW11 (uncharacterized protein LOC111023620 OS=Momordica charantia OX=3673 GN=LOC111023620 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 7.1e-31
Identity = 97/222 (43.69%), Postives = 115/222 (51.80%), Query Frame = 0


Query: 305 VHESQQVDEEPPAKEQEGTSGPVDVSSKAIEESFSFSSQGKTPSLSSLNVSDPNFVATAE 364
           +HESQQ DEE   +EQEG SG VDV ++A+EES S SS+GK+PSLSSLNVSDPNFVA A 
Sbjct: 1   MHESQQDDEESHVQEQEGASGLVDVPNEALEESSSSSSKGKSPSLSSLNVSDPNFVAIAY 60

Query: 365 TSDEEVSLTKVGK----------------------------------------------- 424
           TS+E+V LTKV K                                               
Sbjct: 61  TSEEKVCLTKVVKKARNKKNLDEIVPGANSRPCTRATIASLAAQKEAEAGPFKKAKRVKG 120

Query: 425 ----------IGGEE--------------------TYFTTSDILLERGFDETQESVLEYV 450
                     +  EE                      FT  +IL+E+GFDE QE V +Y+
Sbjct: 121 LRRSEEPLDEVNDEELDSIEQTPSKAKRVRWEVKRVNFTAREILVEKGFDEAQEPVPKYI 180

[Close]

BLAST of Moc06g29650.1 vs. ExPASy TrEMBL
Match: A0A6J1CL76 (uncharacterized protein LOC111012188 OS=Momordica charantia OX=3673 GN=LOC111012188 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.1e-23
Identity = 107/303 (35.31%), Postives = 139/303 (45.87%), Query Frame = 0


Query: 75  INMESHDARVNKEGSSEKKLGGVNKVYHRKNQSLEEKGAVLDEEIARLQERAEMFSKNNE 134
           + +E H AR+N+   +EKKL   +KVY RKNQ + + G+ LDE I  + ER +  +K  E
Sbjct: 1   MTLEPHIARINEGDHTEKKLEEFSKVYLRKNQPMGDTGSDLDERIGMINERVDTKNKKME 60

Query: 135 IRDKENERVYAKIEELNMKWREFMENSKKVSGDPEHDTEPLEHSDSATVEIQRQIAPGAI 194
           IRDKENE + AKI ELN KW+ FMENS+++S                             
Sbjct: 61  IRDKENEVICAKIAELNEKWQRFMENSRRMS----------------------------- 120

Query: 195 MDETPPATLQGILSPSFPDPILTKKPLVFVDSEQERTTSKIVEILVVLNEARGEDPLEDD 254
                                                     EI + L+E          
Sbjct: 121 -----------------------------------------EEIQIELDELY-------- 180

Query: 255 GNSGAVQGQLNVDGDDEDLGELPQEVHGDEFEDEEDNDDISQCEVRVRTPVHESQQVDEE 314
                          DEDLG+LPQEV  +E E+EE+N+DISQ +             +EE
Sbjct: 181 ---------------DEDLGDLPQEV-TNECEEEEENNDISQYD-------------EEE 196

Query: 315 PPAKEQEGTSGPVDVSSKAIEESFSFSSQGKTPSLSSLNVSDPNFVATAETSDEEVSLTK 374
            P + QEG S P DV ++A +ES S SS+  T S SSLNV DPNFVA AE S+EE  LTK
Sbjct: 241 APVQVQEGASSPKDVPNEATKESSSSSSKDMTHSFSSLNVFDPNFVAVAENSEEEACLTK 196

Query: 375 VGK 378
             K
Sbjct: 301 QRK 196

The following BLAST results are available for this feature:

BLAST of Moc06g29650.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154847.1	5.2e-121	59.17	LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]	[more]
XP_022158483.1	1.5e-54	39.33	uncharacterized protein LOC111024964 [Momordica charantia]	[more]
XP_022156935.1	1.0e-31	48.37	uncharacterized protein LOC111023761 [Momordica charantia]	[more]
XP_022156786.1	1.5e-30	43.69	uncharacterized protein LOC111023620 [Momordica charantia]	[more]
XP_022141932.1	2.3e-23	35.31	uncharacterized protein LOC111012188 [Momordica charantia]	[more]

BLAST of Moc06g29650.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc06g29650.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DMT3	2.5e-121	59.17	LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 OS=Momordica charantia...	[more]
A0A6J1DW79	7.0e-55	39.33	uncharacterized protein LOC111024964 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1DRR9	4.9e-32	48.37	uncharacterized protein LOC111023761 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1DW11	7.1e-31	43.69	uncharacterized protein LOC111023620 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1CL76	1.1e-23	35.31	uncharacterized protein LOC111012188 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]

BLAST of Moc06g29650.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 105..125
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 610..633
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 248..276
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 304..319
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 304..328

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Moc06g29650	Moc06g29650	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Moc06g29650.1.exon5	Moc06g29650.1.exon5	exon
Moc06g29650.1.exon4	Moc06g29650.1.exon4	exon
Moc06g29650.1.exon3	Moc06g29650.1.exon3	exon
Moc06g29650.1.exon2	Moc06g29650.1.exon2	exon
Moc06g29650.1.exon1	Moc06g29650.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Moc06g29650.1	cds.Moc06g29650.1_5	CDS
cds.Moc06g29650.1	cds.Moc06g29650.1_4	CDS
cds.Moc06g29650.1	cds.Moc06g29650.1_3	CDS
cds.Moc06g29650.1	cds.Moc06g29650.1_2	CDS
cds.Moc06g29650.1	cds.Moc06g29650.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Moc06g29650.1	Moc06g29650.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003676	nucleic acid binding