Moc06g29540.1 (mRNA) Bitter gourd (OHB3-1) v2

Overview
NameMoc06g29540.1
TypemRNA
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr6: 22228277 .. 22229095 (-)
Sequence length435
RNA-Seq ExpressionMoc06g29540.1
SyntenyMoc06g29540.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAGACTGGTAACTGGCCCTAATTATACTCAGTTAAATATGCATTCCTGCACACTCATGATGGTAACGGTAGGGCGAGGTCAACTTGGCTTGTTCCTGATGTCACTAGATAGGTGTACGTCATCTGGTTGCTTGACATGTGGCAACCTGTTCTCACATTCATAACATCAGCCTCACTTTGCGAGTTTGGGGAGTTTTCATCTCAATTCTGCGAAGGGTCTGTTGGTATTTTCTGCGTGGACTTGAAAGGTCACCACATACTAGGACACGTGGTGCGCTTGCGGGGCCATGATGCTACCATTAAGTGTTAGTAGGGGGGAGGTATGAGGAGGCAACAGTTACTCTTCCAGCGCACCTGGGTCGTTAGTCATGTCGTGCATTTGATAGTTGTCAATGTATTGAGCATTCAGACTCGGGTCACTTCCATCTTGGCCTTTCATCATGCCCTATATCGCGCTATCCTAGTTTGTTGCCTTTTCTCATTTAAATACTTGCCTCCCCCTTTGTGCTTGTATGCAGCTGATCTTTACAAAGAAGATCTCCTTCGTAATCTCTACTGTGGCTATTTTCTACACTCTAGGTCAGTAATATTCTCTGTTCAGTCGTTATTGAACTTCCCTAACCCCGACCCTTTGTTTAATGGCTAGGACTAGGATTGTCGATGTCTCGTCTCGTAGCTTTCGACCGTCGAGCGGGACGACTCCATCTTCTGTGAGGGAATTATCGAACGTCAGATCCAAGTTCTATGAACTATCCTTACACAACTTTGGTTCAGATACGACATTCTTGTCAATGTTGAAATGCCCCTGTTTGTGA

mRNA sequence

ATGGCCAGACTGGTGTACGTCATCTGGTTGCTTGACATGTGGCAACCTGTTCTCACATTCATAACATCAGCCTCACTTTGCGAGTTTGGGGAGTTTTCATCTCAATTCTGCGAAGGGTCTGTTGGTATTTTCTGCGTGGACTTGAAAGGTCACCACATACTAGGACACGTGGTGCGCTTGCGGGGCCATGATGCTACCATTAAGTCTGATCTTTACAAAGAAGATCTCCTTCGTAATCTCTACTGTGGCTATTTTCTACACTCTAGGACTAGGATTGTCGATGTCTCGTCTCGTAGCTTTCGACCGTCGAGCGGGACGACTCCATCTTCTGTGAGGGAATTATCGAACGTCAGATCCAAGTTCTATGAACTATCCTTACACAACTTTGGTTCAGATACGACATTCTTGTCAATGTTGAAATGCCCCTGTTTGTGA

Coding sequence (CDS)

ATGGCCAGACTGGTGTACGTCATCTGGTTGCTTGACATGTGGCAACCTGTTCTCACATTCATAACATCAGCCTCACTTTGCGAGTTTGGGGAGTTTTCATCTCAATTCTGCGAAGGGTCTGTTGGTATTTTCTGCGTGGACTTGAAAGGTCACCACATACTAGGACACGTGGTGCGCTTGCGGGGCCATGATGCTACCATTAAGTCTGATCTTTACAAAGAAGATCTCCTTCGTAATCTCTACTGTGGCTATTTTCTACACTCTAGGACTAGGATTGTCGATGTCTCGTCTCGTAGCTTTCGACCGTCGAGCGGGACGACTCCATCTTCTGTGAGGGAATTATCGAACGTCAGATCCAAGTTCTATGAACTATCCTTACACAACTTTGGTTCAGATACGACATTCTTGTCAATGTTGAAATGCCCCTGTTTGTGA

Protein sequence

MARLVYVIWLLDMWQPVLTFITSASLCEFGEFSSQFCEGSVGIFCVDLKGHHILGHVVRLRGHDATIKSDLYKEDLLRNLYCGYFLHSRTRIVDVSSRSFRPSSGTTPSSVRELSNVRSKFYELSLHNFGSDTTFLSMLKCPCL
Homology
The following BLAST results are available for this feature:
BLAST of Moc06g29540.1 vs.
Match NameE-valueIdentityDescription
BLAST of Moc06g29540.1 vs.
Match NameE-valueIdentityDescription
BLAST of Moc06g29540.1 vs.
Match NameE-valueIdentityDescription
BLAST of Moc06g29540.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Moc06g29540Moc06g29540gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Moc06g29540.1.exon4Moc06g29540.1.exon4exon
Moc06g29540.1.exon3Moc06g29540.1.exon3exon
Moc06g29540.1.exon2Moc06g29540.1.exon2exon
Moc06g29540.1.exon1Moc06g29540.1.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Moc06g29540.1cds.Moc06g29540.1_4CDS
cds.Moc06g29540.1cds.Moc06g29540.1_3CDS
cds.Moc06g29540.1cds.Moc06g29540.1_2CDS
cds.Moc06g29540.1cds.Moc06g29540.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Moc06g29540.1Moc06g29540.1-proteinpolypeptide