Moc05g25450.1 (mRNA) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g25450.1
Type	mRNA
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr5: 18063328 .. 18064468 (+)
Sequence length	237
RNA-Seq Expression	Moc05g25450.1
Synteny	Moc05g25450.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAACAGAAGGTTACAGAACAGAAAAACCTCCAACGATTTCTCTATAACTCTCTCAACCTCTCCCTCTCTTCCATCAAGGTGCTACCACAAGCACGATCCCGAGACCCAAGAGGATAACGGGGAAGATCCGGTGGTGGTGTTCGAGGAGAATTCACTGAAGAAACGATCTTCAAAGGTTTGAATTTCCTCTGTATTTTCCCGCTGTAAAATTCGATTTTGTATCCCGAAAATCAGCAACGAAAGTCCGCTTCCGCTCCGGGATTCACATCCCTTCAAAACCCAACAATGAAGTAAGTTGTGAAAAAAAGGAGATACTCAAATGGTTGAATCCTGAGATCATTTACCCAATTTCTGACAGTGAATGGATCAGCTCTGTACAATGTGTCCCAAAGAAAGTAGGGATGACAGTGATAGAAAATGCTAAGAATGAGCTCATGCTTGCCATAACAGTTACAAGATGGTGGATGTGTATGGACTACAAAAAACTCAACAAGGCCACCAAGAAAGACCATTTTCCATTACCTTTTATTGACCAGATGTTGGATCGATTGACTGACCAGAAGTATTATTGTTTTCTAGGTGGATACAACAGCTATAACCAAATCACTATCGCACATCAATATCAACATAAGACCACTTTAACCTACCCGTATGGAACTTTCGCCTTTAGACGGATCCCCTTCAGTTTGTGCAACGCCCCAGCGACATTCCAACGCTGTATGCTGGCTATTGTCTCTGATTTAGTTGAGTCAGTGGTAGAAGTTTTTATGGTTGATTTATCGGTATTTGGGACAACTTTTGCTGAATGTTTATCAAACCTTCAACGCGTGTTGAAGAGATTTGAGGAAACCAACCTGGTCCACAATTGGGAAAAGTGTCATTTCATGGTCGAAGAGGGTATCGTGTGGAGGCATCTGGTCTTAAGGAAAGATTTGGAGGTAGACAAAGCGAAAGGAAGTCATTGATCAACTGTAGGATTTTATAGGCAGTTCATAAATAACTTATATAAACTTGCAAAACCCTTATGTTTTCTATTAGAAAATGATGGGGTGTTTGATTTCTCTGTTGATTGTTTGCAGGCTTTTTCCACGCTAAAGCATGCGCTTTCCCATGCACCGTGCTATGATCATAATTGA

mRNA sequence

ATGGGAAACAGAAGGTTACAGAACAGAAAAACCTCCAACGATTTCTCTATAACTCTCTCAACCTCTCCCTCTCTTCCATCAAGGTGCTACCACAAGCACGATCCCGAGACCCAAGAGGATAACGGGGAAGATCCGGTGGTGGTGTTCGAGGAGAATTCACTGAAGAAACGATCTTCAAAGGCTTTTTCCACGCTAAAGCATGCGCTTTCCCATGCACCGTGCTATGATCATAATTGA

Coding sequence (CDS)

ATGGGAAACAGAAGGTTACAGAACAGAAAAACCTCCAACGATTTCTCTATAACTCTCTCAACCTCTCCCTCTCTTCCATCAAGGTGCTACCACAAGCACGATCCCGAGACCCAAGAGGATAACGGGGAAGATCCGGTGGTGGTGTTCGAGGAGAATTCACTGAAGAAACGATCTTCAAAGGCTTTTTCCACGCTAAAGCATGCGCTTTCCCATGCACCGTGCTATGATCATAATTGA

Protein sequence

MGNRRLQNRKTSNDFSITLSTSPSLPSRCYHKHDPETQEDNGEDPVVVFEENSLKKRSSKAFSTLKHALSHAPCYDHN

Homology

The following BLAST results are available for this feature:

BLAST of Moc05g25450.1 vs.


Match Name	E-value	Identity	Description

BLAST of Moc05g25450.1 vs.


Match Name	E-value	Identity	Description

BLAST of Moc05g25450.1 vs.


Match Name	E-value	Identity	Description

BLAST of Moc05g25450.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..45

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Moc05g25450	Moc05g25450	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Moc05g25450.1.exon1	Moc05g25450.1.exon1	exon
Moc05g25450.1.exon2	Moc05g25450.1.exon2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Moc05g25450.1	cds.Moc05g25450.1	CDS
cds.Moc05g25450.1	cds.Moc05g25450.1_2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Moc05g25450.1	Moc05g25450.1-protein	polypeptide