Moc05g10100.1 (mRNA) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g10100.1
Type	mRNA
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ribonuclease H
Location	chr5: 7886342 .. 7887115 (+)
Sequence length	774
RNA-Seq Expression	Moc05g10100.1
Synteny	Moc05g10100.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAGGCAAAGCTTTTCACCCCAGGATCTGGAAACTACACGATCACAGAAGTTAACGACACAGAAAACCCGACCAAGCCTCGAGAACACCATGGTCGACAAAGAAGAACCACTTAACCAACATGCAGGAGAATCACAGAAGCATAATGGCGAACTGAAGAATAGAGAATGCGGTCTCGAAGAAATTATAGATCAGACAGATTCGCCATTCGGGGAGGAGATAATGAGAGGAAAGATCCCTCCAAAATTCAGACTCCCTGCCATAAAGCAATACGACGACTCAACAGATCCTGTAGACCATCTATGCACATATAGGGAATGGATGGACCTCTACGGAATAACAGAGGCAATTAGGTGCAAAGTATTCTCTTTCACATTAACCGGCACAACTCGCATATGGTTTCGACAATTGAGAAGAAAATCAATCTTCTCCTTCAAACAGCTGGTCAGGGCATTTATCACGCAATTCATTGGAGGGCAGGATAGGAGTCGACCTGTGACCTACCTCTTTACCATAAAACAAAGATCGACAGAGAGCCTTGGAGAATATGTGTCTCGCTTCAACGAGGAAAGATTACTAGTCAGAGATCTTACCAACGGAATATCACTACTTGCTTTCATATCTGTGGTAAGAGAACAAGAGTTATTGTTCTCTTCTAGGAAAAGGGCCCCAACAACTTTCTCAGAAGCGTTGACTCGAATCCAAAAGTATATGGACGTAAAAGAGCTACTCCATTCAAAATGGGATCTCAACAAAACTCAAGACCTATAA

mRNA sequence

ATGGAAAGGCAAAGCTTTTCACCCCAGGATCTGGAAACTACACGATCACAGAAGTTAACGACACAGAAAACCCGACCAAGCCTCGAGAACACCATGGTCGACAAAGAAGAACCACTTAACCAACATGCAGGAGAATCACAGAAGCATAATGGCGAACTGAAGAATAGAGAATGCGGTCTCGAAGAAATTATAGATCAGACAGATTCGCCATTCGGGGAGGAGATAATGAGAGGAAAGATCCCTCCAAAATTCAGACTCCCTGCCATAAAGCAATACGACGACTCAACAGATCCTGTAGACCATCTATGCACATATAGGGAATGGATGGACCTCTACGGAATAACAGAGGCAATTAGGTGCAAAGTATTCTCTTTCACATTAACCGGCACAACTCGCATATGGTTTCGACAATTGAGAAGAAAATCAATCTTCTCCTTCAAACAGCTGGTCAGGGCATTTATCACGCAATTCATTGGAGGGCAGGATAGGAGTCGACCTGTGACCTACCTCTTTACCATAAAACAAAGATCGACAGAGAGCCTTGGAGAATATGTGTCTCGCTTCAACGAGGAAAGATTACTAGTCAGAGATCTTACCAACGGAATATCACTACTTGCTTTCATATCTGTGGTAAGAGAACAAGAGTTATTGTTCTCTTCTAGGAAAAGGGCCCCAACAACTTTCTCAGAAGCGTTGACTCGAATCCAAAAGTATATGGACGTAAAAGAGCTACTCCATTCAAAATGGGATCTCAACAAAACTCAAGACCTATAA

Coding sequence (CDS)

ATGGAAAGGCAAAGCTTTTCACCCCAGGATCTGGAAACTACACGATCACAGAAGTTAACGACACAGAAAACCCGACCAAGCCTCGAGAACACCATGGTCGACAAAGAAGAACCACTTAACCAACATGCAGGAGAATCACAGAAGCATAATGGCGAACTGAAGAATAGAGAATGCGGTCTCGAAGAAATTATAGATCAGACAGATTCGCCATTCGGGGAGGAGATAATGAGAGGAAAGATCCCTCCAAAATTCAGACTCCCTGCCATAAAGCAATACGACGACTCAACAGATCCTGTAGACCATCTATGCACATATAGGGAATGGATGGACCTCTACGGAATAACAGAGGCAATTAGGTGCAAAGTATTCTCTTTCACATTAACCGGCACAACTCGCATATGGTTTCGACAATTGAGAAGAAAATCAATCTTCTCCTTCAAACAGCTGGTCAGGGCATTTATCACGCAATTCATTGGAGGGCAGGATAGGAGTCGACCTGTGACCTACCTCTTTACCATAAAACAAAGATCGACAGAGAGCCTTGGAGAATATGTGTCTCGCTTCAACGAGGAAAGATTACTAGTCAGAGATCTTACCAACGGAATATCACTACTTGCTTTCATATCTGTGGTAAGAGAACAAGAGTTATTGTTCTCTTCTAGGAAAAGGGCCCCAACAACTTTCTCAGAAGCGTTGACTCGAATCCAAAAGTATATGGACGTAAAAGAGCTACTCCATTCAAAATGGGATCTCAACAAAACTCAAGACCTATAA

Protein sequence

MERQSFSPQDLETTRSQKLTTQKTRPSLENTMVDKEEPLNQHAGESQKHNGELKNRECGLEEIIDQTDSPFGEEIMRGKIPPKFRLPAIKQYDDSTDPVDHLCTYREWMDLYGITEAIRCKVFSFTLTGTTRIWFRQLRRKSIFSFKQLVRAFITQFIGGQDRSRPVTYLFTIKQRSTESLGEYVSRFNEERLLVRDLTNGISLLAFISVVREQELLFSSRKRAPTTFSEALTRIQKYMDVKELLHSKWDLNKTQDL

Homology

[Close]

BLAST of Moc05g10100.1 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])

HSP 1 Score: 268.9 bits (686), Expect = 4.7e-68
Identity = 131/220 (59.55%), Postives = 168/220 (76.36%), Query Frame = 0


Query: 29  ENTMVDKEEPLNQHAGESQKHNGELKNRECGLEEIIDQTDSPFGEEIMRGKIPPKFRLPA 88
           E   +DK +P ++     ++H+   K +   LEE++DQ DSPF EEIMR K+PPKF+LP 
Sbjct: 140 EPISLDKGKPADRPESSEKRHSH--KEKGFDLEELLDQADSPFTEEIMREKVPPKFKLPT 199

Query: 89  IKQYDDSTDPVDHLCTYREWMDLYGITEAIRCKVFSFTLTGTTRIWFRQLRRKSIFSFKQ 148
           +KQ+D +TDPVDHL  YREWMD+YG++EA+RC+VFS TL G+ RIWFRQL+R SI SFK 
Sbjct: 200 VKQFDXTTDPVDHLDAYREWMDIYGVSEAVRCRVFSTTLNGSARIWFRQLKRGSISSFKS 259

Query: 149 LVRAFITQFIGGQDRSRPVTYLFTIKQRSTESLGEYVSRFNEERLLVRDLTNGISLLAFI 208
           L RAF+TQF+GG+ RSRPV YL TIKQR+TESL +YV+RFNEE+L V  LT+ +SLLAF+
Sbjct: 260 LARAFVTQFVGGRCRSRPVAYLLTIKQRTTESLRDYVARFNEEKLQVEGLTDAVSLLAFM 319

Query: 209 SVVREQELLFSSRKRAPTTFSEALTRIQKYMDVKELLHSK 249
           S VR++ L FS  KR P TFSEAL+R Q+YM   E  +SK
Sbjct: 320 SGVRDEHLSFSFGKRTPNTFSEALSRAQRYMSAGEFFYSK 357

[Close]

BLAST of Moc05g10100.1 vs. NCBI nr
Match: XP_022159109.1 (uncharacterized protein LOC111025548 [Momordica charantia])

HSP 1 Score: 260.0 bits (663), Expect = 2.2e-65
Identity = 126/220 (57.27%), Postives = 166/220 (75.45%), Query Frame = 0


Query: 29  ENTMVDKEEPLNQHAGESQKHNGELKNRECGLEEIIDQTDSPFGEEIMRGKIPPKFRLPA 88
           E   ++K +P+++     ++HN   K +   LEE++ Q DSPF EEIMR K+PPKF+LP 
Sbjct: 45  EPISLNKGKPIDRPESSEKRHN--QKEKGFDLEELLGQADSPFTEEIMREKVPPKFKLPT 104

Query: 89  IKQYDDSTDPVDHLCTYREWMDLYGITEAIRCKVFSFTLTGTTRIWFRQLRRKSIFSFKQ 148
           +K +D  T+PVDHL  YREWMD+YG+++AIRC+VFS TL G+ RIWFRQL+R SI SFK 
Sbjct: 105 VKPFDGMTEPVDHLDAYREWMDIYGVSDAIRCRVFSTTLNGSARIWFRQLKRGSISSFKS 164

Query: 149 LVRAFITQFIGGQDRSRPVTYLFTIKQRSTESLGEYVSRFNEERLLVRDLTNGISLLAFI 208
           L RAF+TQF+GG+ RSRPV YL TIKQR+ ESL +YV+RFNEE+L +  LT+ +SLLAF+
Sbjct: 165 LARAFMTQFVGGRCRSRPVAYLLTIKQRTAESLHDYVARFNEEKLQLEGLTDAVSLLAFM 224

Query: 209 SVVREQELLFSSRKRAPTTFSEALTRIQKYMDVKELLHSK 249
           S VR++ L FS  KR P+TFSEAL+R Q+YM   E  +SK
Sbjct: 225 SGVRDEHLSFSFEKRTPSTFSEALSRAQRYMSASEFCYSK 262

[Close]

BLAST of Moc05g10100.1 vs. NCBI nr
Match: XP_022147761.1 (uncharacterized protein LOC111016619 [Momordica charantia])

HSP 1 Score: 243.4 bits (620), Expect = 2.1e-60
Identity = 116/175 (66.29%), Postives = 144/175 (82.29%), Query Frame = 0


Query: 76  MRGKIPPKFRLPAIKQYDDSTDPVDHLCTYREWMDLYGITEAIRCKVFSFTLTGTTRIWF 135
           M+ K+PPKF+LPAIK+YD STDP+DHL  Y EW D+YGITEAIRC+VFSFTLTG+TRIWF
Sbjct: 1   MKEKVPPKFKLPAIKKYDGSTDPIDHLDVYHEWTDIYGITEAIRCRVFSFTLTGSTRIWF 60

Query: 136 RQLRRKSIFSFKQLVRAFITQFIGGQDRSRPVTYLFTIKQRSTESLGEYVSRFNEERLLV 195
           +QL+RKSI SFK+L RAF+TQF GG +RSRPV YL TIKQ++TESL +YV+RFN+E+L V
Sbjct: 61  QQLKRKSISSFKELARAFVTQFAGGWNRSRPVAYLLTIKQKATESLKDYVARFNKEKLQV 120

Query: 196 RDLTNGISLLAFISVVREQELLFSSRKRAPTTFSEALTRIQKYMDVKELLHSKWD 251
             LT+ + LL FIS V++++L+FS  KR   TFSEA +R Q YM V EL+HSK D
Sbjct: 121 EGLTDAVVLLVFISGVKDEQLVFSFGKRTSGTFSEARSRAQTYMSVGELIHSKRD 175

[Close]

BLAST of Moc05g10100.1 vs. NCBI nr
Match: XP_022150035.1 (uncharacterized protein LOC111018307 [Momordica charantia])

HSP 1 Score: 237.7 bits (605), Expect = 1.1e-58
Identity = 110/176 (62.50%), Postives = 142/176 (80.68%), Query Frame = 0


Query: 73  EEIMRGKIPPKFRLPAIKQYDDSTDPVDHLCTYREWMDLYGITEAIRCKVFSFTLTGTTR 132
           EEIM+ K+PPKF+LP +KQ+D + D VDHL  YREWMD+YG++EA++C+VFS TL+G+ R
Sbjct: 2   EEIMKVKVPPKFKLPTVKQFDGTVDLVDHLDAYREWMDIYGVSEAVKCRVFSTTLSGSAR 61

Query: 133 IWFRQLRRKSIFSFKQLVRAFITQFIGGQDRSRPVTYLFTIKQRSTESLGEYVSRFNEER 192
           +WFRQL+R SI SFK L +AF+TQFIGG+ RSRPV YL TIKQR+TESL +YV+RFNEE+
Sbjct: 62  VWFRQLKRGSISSFKSLAKAFVTQFIGGRSRSRPVAYLLTIKQRATESLHDYVARFNEEK 121

Query: 193 LLVRDLTNGISLLAFISVVREQELLFSSRKRAPTTFSEALTRIQKYMDVKELLHSK 249
           L V  LTN +SL+AF+S +R++ L FS  K+ P+TFSEAL+R QKYM   E   SK
Sbjct: 122 LQVEGLTNAVSLMAFMSDIRDEHLSFSFGKKTPSTFSEALSRAQKYMSAGEFFFSK 177

[Close]

BLAST of Moc05g10100.1 vs. NCBI nr
Match: XP_022158344.1 (uncharacterized protein LOC111024851 [Momordica charantia])

HSP 1 Score: 230.7 bits (587), Expect = 1.4e-56
Identity = 109/178 (61.24%), Postives = 139/178 (78.09%), Query Frame = 0


Query: 76  MRGKIPPKFRLPAIKQYDDSTDPVDHLCTYREWMDLYGITEAIRCKVFSFTLTGTTRIWF 135
           M+ K  PKF+LPAI +YD S DP+DHL  YREW D+Y I EAIRC+VFSFTLTG+ R WF
Sbjct: 1   MKEKARPKFKLPAIAEYDGSADPIDHLDAYREWADIYDIREAIRCRVFSFTLTGSARNWF 60

Query: 136 RQLRRKSIFSFKQLVRAFITQFIGGQDRSRPVTYLFTIKQRSTESLGEYVSRFNEERLLV 195
           RQL+R SI SFK+L  AF+TQF+GG+ +S+PVTYL TIKQ++TESL EYV+RFNEE+L V
Sbjct: 61  RQLKRNSISSFKELAEAFVTQFVGGRVKSKPVTYLLTIKQKATESLKEYVARFNEEKLQV 120

Query: 196 RDLTNGISLLAFISVVREQELLFSSRKRAPTTFSEALTRIQKYMDVKELLHSKWDLNK 254
             LT+ ++L+AF+S V+++ L+FS  KR P TF EAL+R QKYM   EL+H   DL +
Sbjct: 121 EGLTDAVALIAFVSGVKDERLVFSFGKRTPGTFMEALSRAQKYMSAGELIHLSRDLER 178

[Close]

BLAST of Moc05g10100.1 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 2.3e-68
Identity = 131/220 (59.55%), Postives = 168/220 (76.36%), Query Frame = 0


Query: 29  ENTMVDKEEPLNQHAGESQKHNGELKNRECGLEEIIDQTDSPFGEEIMRGKIPPKFRLPA 88
           E   +DK +P ++     ++H+   K +   LEE++DQ DSPF EEIMR K+PPKF+LP 
Sbjct: 140 EPISLDKGKPADRPESSEKRHSH--KEKGFDLEELLDQADSPFTEEIMREKVPPKFKLPT 199

Query: 89  IKQYDDSTDPVDHLCTYREWMDLYGITEAIRCKVFSFTLTGTTRIWFRQLRRKSIFSFKQ 148
           +KQ+D +TDPVDHL  YREWMD+YG++EA+RC+VFS TL G+ RIWFRQL+R SI SFK 
Sbjct: 200 VKQFDXTTDPVDHLDAYREWMDIYGVSEAVRCRVFSTTLNGSARIWFRQLKRGSISSFKS 259

Query: 149 LVRAFITQFIGGQDRSRPVTYLFTIKQRSTESLGEYVSRFNEERLLVRDLTNGISLLAFI 208
           L RAF+TQF+GG+ RSRPV YL TIKQR+TESL +YV+RFNEE+L V  LT+ +SLLAF+
Sbjct: 260 LARAFVTQFVGGRCRSRPVAYLLTIKQRTTESLRDYVARFNEEKLQVEGLTDAVSLLAFM 319

Query: 209 SVVREQELLFSSRKRAPTTFSEALTRIQKYMDVKELLHSK 249
           S VR++ L FS  KR P TFSEAL+R Q+YM   E  +SK
Sbjct: 320 SGVRDEHLSFSFGKRTPNTFSEALSRAQRYMSAGEFFYSK 357

[Close]

BLAST of Moc05g10100.1 vs. ExPASy TrEMBL
Match: A0A6J1E1E7 (uncharacterized protein LOC111025548 OS=Momordica charantia OX=3673 GN=LOC111025548 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 1.0e-65
Identity = 126/220 (57.27%), Postives = 166/220 (75.45%), Query Frame = 0


Query: 29  ENTMVDKEEPLNQHAGESQKHNGELKNRECGLEEIIDQTDSPFGEEIMRGKIPPKFRLPA 88
           E   ++K +P+++     ++HN   K +   LEE++ Q DSPF EEIMR K+PPKF+LP 
Sbjct: 45  EPISLNKGKPIDRPESSEKRHN--QKEKGFDLEELLGQADSPFTEEIMREKVPPKFKLPT 104

Query: 89  IKQYDDSTDPVDHLCTYREWMDLYGITEAIRCKVFSFTLTGTTRIWFRQLRRKSIFSFKQ 148
           +K +D  T+PVDHL  YREWMD+YG+++AIRC+VFS TL G+ RIWFRQL+R SI SFK 
Sbjct: 105 VKPFDGMTEPVDHLDAYREWMDIYGVSDAIRCRVFSTTLNGSARIWFRQLKRGSISSFKS 164

Query: 149 LVRAFITQFIGGQDRSRPVTYLFTIKQRSTESLGEYVSRFNEERLLVRDLTNGISLLAFI 208
           L RAF+TQF+GG+ RSRPV YL TIKQR+ ESL +YV+RFNEE+L +  LT+ +SLLAF+
Sbjct: 165 LARAFMTQFVGGRCRSRPVAYLLTIKQRTAESLHDYVARFNEEKLQLEGLTDAVSLLAFM 224

Query: 209 SVVREQELLFSSRKRAPTTFSEALTRIQKYMDVKELLHSK 249
           S VR++ L FS  KR P+TFSEAL+R Q+YM   E  +SK
Sbjct: 225 SGVRDEHLSFSFEKRTPSTFSEALSRAQRYMSASEFCYSK 262

[Close]

BLAST of Moc05g10100.1 vs. ExPASy TrEMBL
Match: A0A6J1D3B7 (uncharacterized protein LOC111016619 OS=Momordica charantia OX=3673 GN=LOC111016619 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 1.0e-60
Identity = 116/175 (66.29%), Postives = 144/175 (82.29%), Query Frame = 0


Query: 76  MRGKIPPKFRLPAIKQYDDSTDPVDHLCTYREWMDLYGITEAIRCKVFSFTLTGTTRIWF 135
           M+ K+PPKF+LPAIK+YD STDP+DHL  Y EW D+YGITEAIRC+VFSFTLTG+TRIWF
Sbjct: 1   MKEKVPPKFKLPAIKKYDGSTDPIDHLDVYHEWTDIYGITEAIRCRVFSFTLTGSTRIWF 60

Query: 136 RQLRRKSIFSFKQLVRAFITQFIGGQDRSRPVTYLFTIKQRSTESLGEYVSRFNEERLLV 195
           +QL+RKSI SFK+L RAF+TQF GG +RSRPV YL TIKQ++TESL +YV+RFN+E+L V
Sbjct: 61  QQLKRKSISSFKELARAFVTQFAGGWNRSRPVAYLLTIKQKATESLKDYVARFNKEKLQV 120

Query: 196 RDLTNGISLLAFISVVREQELLFSSRKRAPTTFSEALTRIQKYMDVKELLHSKWD 251
             LT+ + LL FIS V++++L+FS  KR   TFSEA +R Q YM V EL+HSK D
Sbjct: 121 EGLTDAVVLLVFISGVKDEQLVFSFGKRTSGTFSEARSRAQTYMSVGELIHSKRD 175

[Close]

BLAST of Moc05g10100.1 vs. ExPASy TrEMBL
Match: A0A6J1D7D2 (uncharacterized protein LOC111018307 OS=Momordica charantia OX=3673 GN=LOC111018307 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 5.6e-59
Identity = 110/176 (62.50%), Postives = 142/176 (80.68%), Query Frame = 0


Query: 73  EEIMRGKIPPKFRLPAIKQYDDSTDPVDHLCTYREWMDLYGITEAIRCKVFSFTLTGTTR 132
           EEIM+ K+PPKF+LP +KQ+D + D VDHL  YREWMD+YG++EA++C+VFS TL+G+ R
Sbjct: 2   EEIMKVKVPPKFKLPTVKQFDGTVDLVDHLDAYREWMDIYGVSEAVKCRVFSTTLSGSAR 61

Query: 133 IWFRQLRRKSIFSFKQLVRAFITQFIGGQDRSRPVTYLFTIKQRSTESLGEYVSRFNEER 192
           +WFRQL+R SI SFK L +AF+TQFIGG+ RSRPV YL TIKQR+TESL +YV+RFNEE+
Sbjct: 62  VWFRQLKRGSISSFKSLAKAFVTQFIGGRSRSRPVAYLLTIKQRATESLHDYVARFNEEK 121

Query: 193 LLVRDLTNGISLLAFISVVREQELLFSSRKRAPTTFSEALTRIQKYMDVKELLHSK 249
           L V  LTN +SL+AF+S +R++ L FS  K+ P+TFSEAL+R QKYM   E   SK
Sbjct: 122 LQVEGLTNAVSLMAFMSDIRDEHLSFSFGKKTPSTFSEALSRAQKYMSAGEFFFSK 177

[Close]

BLAST of Moc05g10100.1 vs. ExPASy TrEMBL
Match: A0A6J1DZ49 (uncharacterized protein LOC111024851 OS=Momordica charantia OX=3673 GN=LOC111024851 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 6.8e-57
Identity = 109/178 (61.24%), Postives = 139/178 (78.09%), Query Frame = 0


Query: 76  MRGKIPPKFRLPAIKQYDDSTDPVDHLCTYREWMDLYGITEAIRCKVFSFTLTGTTRIWF 135
           M+ K  PKF+LPAI +YD S DP+DHL  YREW D+Y I EAIRC+VFSFTLTG+ R WF
Sbjct: 1   MKEKARPKFKLPAIAEYDGSADPIDHLDAYREWADIYDIREAIRCRVFSFTLTGSARNWF 60

Query: 136 RQLRRKSIFSFKQLVRAFITQFIGGQDRSRPVTYLFTIKQRSTESLGEYVSRFNEERLLV 195
           RQL+R SI SFK+L  AF+TQF+GG+ +S+PVTYL TIKQ++TESL EYV+RFNEE+L V
Sbjct: 61  RQLKRNSISSFKELAEAFVTQFVGGRVKSKPVTYLLTIKQKATESLKEYVARFNEEKLQV 120

Query: 196 RDLTNGISLLAFISVVREQELLFSSRKRAPTTFSEALTRIQKYMDVKELLHSKWDLNK 254
             LT+ ++L+AF+S V+++ L+FS  KR P TF EAL+R QKYM   EL+H   DL +
Sbjct: 121 EGLTDAVALIAFVSGVKDERLVFSFGKRTPGTFMEALSRAQKYMSAGELIHLSRDLER 178

The following BLAST results are available for this feature:

BLAST of Moc05g10100.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158830.1	4.7e-68	59.55	uncharacterized protein LOC111025293 [Momordica charantia]	[more]
XP_022159109.1	2.2e-65	57.27	uncharacterized protein LOC111025548 [Momordica charantia]	[more]
XP_022147761.1	2.1e-60	66.29	uncharacterized protein LOC111016619 [Momordica charantia]	[more]
XP_022150035.1	1.1e-58	62.50	uncharacterized protein LOC111018307 [Momordica charantia]	[more]
XP_022158344.1	1.4e-56	61.24	uncharacterized protein LOC111024851 [Momordica charantia]	[more]

BLAST of Moc05g10100.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc05g10100.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DWY0	2.3e-68	59.55	uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1E1E7	1.0e-65	57.27	uncharacterized protein LOC111025548 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1D3B7	1.0e-60	66.29	uncharacterized protein LOC111016619 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A6J1D7D2	5.6e-59	62.50	uncharacterized protein LOC111018307 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1DZ49	6.8e-57	61.24	uncharacterized protein LOC111024851 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]

BLAST of Moc05g10100.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 121..196 e-value: 1.6E-11 score: 44.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..58
None	No IPR available	PANTHER	PTHR33223	FAMILY NOT NAMED	coord: 87..237

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Moc05g10100	Moc05g10100	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Moc05g10100.1.exon1	Moc05g10100.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Moc05g10100.1	cds.Moc05g10100.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Moc05g10100.1	Moc05g10100.1-protein	polypeptide