Moc04g39460.1 (mRNA) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g39460.1
Type	mRNA
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	BAHD acyltransferase At3g29680-like
Location	chr4: 29296833 .. 29297399 (-)
Sequence length	495
RNA-Seq Expression	Moc04g39460.1
Synteny	Moc04g39460.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGATGAGCTGTTGAAGGCTCACTCTGAGGTGGAAATTTTGAAGGCCGAGGTGGAGACCAAGGTCGAGCTGCTGAAGAAGGAAGAGGACATACGCAAGGCCCAGCTCCGAGCTGCCCATGCTATCACCAGGGGCTTGGAGAAGGATAAGTTCCAACTCCTGAAGGAGAAAGACGACATGCTCCAGGCGCTTGAAGCGAAGGATGAGGAGCTGAAGCATGCGACTGCCGAGCTGGAGACGGCGAAGGAGCGTCTCAGCAATGGAGTCCTATTGGAGGAATCGTTTAGGCAACATCCTGACTTCGATGGATTTGCCAAAGACTTCTCTGACGCGGGCTTCAAGTTCCTCATGAAGGGCATTGCTTCCGACATGCCTGACCTTCAGATCGATCTCAGTGGTCTGAAAAAGAGGTATGCCGAGCAGTGAGCGTCTGGGCCTGGCGGCACCCCTGGCCCCCAAGCGTTGGTGGATAAGTATGTCAGAGATCTGGACTCTGACTACTCCGATCTCGAAGAGGACCAGGTCGGCACCACTCAGGAGAGCGCTCCTCAGGCAGGCTCTTAG

mRNA sequence

ATGAAGGATGAGCTGTTGAAGGCTCACTCTGAGGTGGAAATTTTGAAGGCCGAGGTGGAGACCAAGGTCGAGCTGCTGAAGAAGGAAGAGGACATACGCAAGGCCCAGCTCCGAGCTGCCCATGCTATCACCAGGGGCTTGGAGAAGGATAAGTTCCAACTCCTGAAGGAGAAAGACGACATGCTCCAGGCGCTTGAAGCGAAGGATGAGGAGCTGAAGCATGCGACTGCCGAGCTGGAGACGGCGAAGGAGCGTCTCAGCAATGGAGTCCTATTGGAGGAATCGTTTAGGCAACATCCTGACTTCGATGGATTTGCCAAAGACTTCTCTGACGCGGGCTTCAAGTTCCTCATGAAGGGCATTGCTTCCGACATGCCTGACCTTCAGATCGATCTCAGTGGTCTGAAAAAGAGAGATCTGGACTCTGACTACTCCGATCTCGAAGAGGACCAGGTCGGCACCACTCAGGAGAGCGCTCCTCAGGCAGGCTCTTAG

Coding sequence (CDS)

ATGAAGGATGAGCTGTTGAAGGCTCACTCTGAGGTGGAAATTTTGAAGGCCGAGGTGGAGACCAAGGTCGAGCTGCTGAAGAAGGAAGAGGACATACGCAAGGCCCAGCTCCGAGCTGCCCATGCTATCACCAGGGGCTTGGAGAAGGATAAGTTCCAACTCCTGAAGGAGAAAGACGACATGCTCCAGGCGCTTGAAGCGAAGGATGAGGAGCTGAAGCATGCGACTGCCGAGCTGGAGACGGCGAAGGAGCGTCTCAGCAATGGAGTCCTATTGGAGGAATCGTTTAGGCAACATCCTGACTTCGATGGATTTGCCAAAGACTTCTCTGACGCGGGCTTCAAGTTCCTCATGAAGGGCATTGCTTCCGACATGCCTGACCTTCAGATCGATCTCAGTGGTCTGAAAAAGAGAGATCTGGACTCTGACTACTCCGATCTCGAAGAGGACCAGGTCGGCACCACTCAGGAGAGCGCTCCTCAGGCAGGCTCTTAG

Protein sequence

MKDELLKAHSEVEILKAEVETKVELLKKEEDIRKAQLRAAHAITRGLEKDKFQLLKEKDDMLQALEAKDEELKHATAELETAKERLSNGVLLEESFRQHPDFDGFAKDFSDAGFKFLMKGIASDMPDLQIDLSGLKKRDLDSDYSDLEEDQVGTTQESAPQAGS

Homology

[Close]

BLAST of Moc04g39460.1 vs. NCBI nr
Match: XP_022150343.1 (uncharacterized protein LOC111018538 [Momordica charantia])

HSP 1 Score: 260.4 bits (664), Expect = 1.1e-65
Identity = 146/188 (77.66%), Postives = 156/188 (82.98%), Query Frame = 0


Query: 1   MKDELLKAHSEVEILKAEVETKVELLKKEEDIRKAQLRAAHAITRGLEKDKFQLLKEKDD 60
           MKDELLKAHSEVE LKAEVE++ ELLKKEED R+AQLRAAHAITRGLE++KFQLLKEKDD
Sbjct: 113 MKDELLKAHSEVETLKAEVESQAELLKKEEDRRQAQLRAAHAITRGLEREKFQLLKEKDD 172

Query: 61  MLQALEAKDEELKHATAELETAKERLSNGVLLEESFRQHPDFDGFAKDFSDAGFKFLMKG 120
           MLQALEAKD+EL+HATAELETAKERLSNGVLLEE+FRQHPDFDGFAKDFSDAGFKFLMKG
Sbjct: 173 MLQALEAKDKELEHATAELETAKERLSNGVLLEEAFRQHPDFDGFAKDFSDAGFKFLMKG 232

Query: 121 IASDMPDLQIDLSGLKK------------------------RDLDSDYSDLEEDQVGTTQ 165
           IASDMPDLQIDLSGLK+                        RDLDSDYSD EEDQVG+TQ
Sbjct: 233 IASDMPDLQIDLSGLKRRYAEKWASGPGGTPGPQALVDQYVRDLDSDYSDPEEDQVGSTQ 292

[Close]

BLAST of Moc04g39460.1 vs. NCBI nr
Match: XP_022159252.1 (uncharacterized protein LOC111025665 [Momordica charantia])

HSP 1 Score: 207.2 bits (526), Expect = 1.1e-49
Identity = 122/198 (61.62%), Postives = 140/198 (70.71%), Query Frame = 0


Query: 1   MKDELLKAHSEVEILKAEVETKVELLKKEEDIRKAQLRAAHAITRGLEKDKFQLLKEKDD 60
           +K ELLKA  EV+IL+AEV+ KV+LLKKE +  KA LRAAHAIT+GLEK+KFQLLKEKDD
Sbjct: 337 LKGELLKAQGEVDILRAEVDAKVDLLKKEGEKHKAHLRAAHAITKGLEKEKFQLLKEKDD 396

Query: 61  MLQALEAKDEELKHATAELETAKERLSNGVLLEESFRQHPDFDGFAKDFSDAGFKFLMKG 120
           + Q LE KD  +   T EL+  KERL+NG LLEESFRQHPDFDGFAKDFSDAGFKFLMKG
Sbjct: 397 LAQVLEEKDASIGRLTTELKDLKERLTNGTLLEESFRQHPDFDGFAKDFSDAGFKFLMKG 456

Query: 121 IASDMPDLQIDLSGLKK------------------------RDLDSDYSDLEED------ 165
           IA+DMP LQIDL+GLKK                        R+LDSDYSD+EE+      
Sbjct: 457 IAADMPHLQIDLNGLKKKYSEKWASGPNGTPDPQSLVDKYVRELDSDYSDMEEEDAPSQE 516

[Close]

BLAST of Moc04g39460.1 vs. NCBI nr
Match: XP_022147182.1 (uncharacterized protein LOC111016193 [Momordica charantia])

HSP 1 Score: 201.1 bits (510), Expect = 7.6e-48
Identity = 117/192 (60.94%), Postives = 136/192 (70.83%), Query Frame = 0


Query: 1   MKDELLKAHSEVEILKAEVETKVELLKKEEDIRKAQLRAAHAITRGLEKDKFQLLKEKDD 60
           +K ELLKA  EV+IL+AEV+ K +LLKKE +  KA LRAAHAIT+GLEK+KFQLLKEKDD
Sbjct: 91  LKGELLKAQGEVDILRAEVDAKTDLLKKEGEKHKAHLRAAHAITKGLEKEKFQLLKEKDD 150

Query: 61  MLQALEAKDEELKHATAELETAKERLSNGVLLEESFRQHPDFDGFAKDFSDAGFKFLMKG 120
           + Q LE KD  +   T EL+  KERL++G LLEESFRQHP+FDGFAKDFSDAGFKFLMKG
Sbjct: 151 LAQVLEKKDASIGRLTTELKDLKERLTDGALLEESFRQHPNFDGFAKDFSDAGFKFLMKG 210

Query: 121 IASDMPDLQIDLSGLKK------------------------RDLDSDYSDLEED------ 161
           IA+DMP LQIDLS LKK                        R+LDSDYSD+EE+      
Sbjct: 211 IAADMPHLQIDLSDLKKRYSENWASGPNGTPGPQSLVDKYVRELDSDYSDMEEEDAPSQE 270

[Close]

BLAST of Moc04g39460.1 vs. NCBI nr
Match: XP_022152119.1 (uncharacterized protein LOC111019909 [Momordica charantia])

HSP 1 Score: 200.7 bits (509), Expect = 9.9e-48
Identity = 118/192 (61.46%), Postives = 134/192 (69.79%), Query Frame = 0


Query: 1   MKDELLKAHSEVEILKAEVETKVELLKKEEDIRKAQLRAAHAITRGLEKDKFQLLKEKDD 60
           +K ELLKA  EV IL+AEV+ K ELLKKE +  KA LRAAHAIT+GLEK+KFQLLKEKDD
Sbjct: 99  LKGELLKAQGEVGILRAEVDAKAELLKKEGEKHKAHLRAAHAITKGLEKEKFQLLKEKDD 158

Query: 61  MLQALEAKDEELKHATAELETAKERLSNGVLLEESFRQHPDFDGFAKDFSDAGFKFLMKG 120
           + Q LE KD  +   TAEL+  KERL+NG LLEESFRQH DFDGFAKDFSDAGFKFLMKG
Sbjct: 159 LAQVLEGKDTSIGRLTAELKDLKERLTNGSLLEESFRQHLDFDGFAKDFSDAGFKFLMKG 218

Query: 121 IASDMPDLQIDLSGLKK------------------------RDLDSDYSDLEED------ 161
           IA+DMP LQIDLS LKK                        R+LDSDYSD+EE+      
Sbjct: 219 IAADMPHLQIDLSNLKKKYSEKWASGPNGTPGPQSLVVKYVRELDSDYSDMEEEDAPSQE 278

[Close]

BLAST of Moc04g39460.1 vs. NCBI nr
Match: XP_022158409.1 (uncharacterized protein LOC111024898 [Momordica charantia])

HSP 1 Score: 190.7 bits (483), Expect = 1.0e-44
Identity = 114/192 (59.38%), Postives = 133/192 (69.27%), Query Frame = 0


Query: 1   MKDELLKAHSEVEILKAEVETKVELLKKEEDIRKAQLRAAHAITRGLEKDKFQLLKEKDD 60
           MK ELLKA SEV ILKA+V+ K E+LKKE +  KA L AAHAIT+ +EK+KFQLLKEKDD
Sbjct: 30  MKSELLKARSEVGILKAKVDXKAEILKKEGEKHKAHLXAAHAITKXMEKEKFQLLKEKDD 89

Query: 61  MLQALEAKDEELKHATAELETAKERLSNGVLLEESFRQHPDFDGFAKDFSDAGFKFLMKG 120
           + QALE  D  +   + EL+ AKERL+NGVLLEE+F+QHPDFDGFAKDFSDAGFKFLMKG
Sbjct: 90  LAQALEETDALIGRLSXELKDAKERLTNGVLLEEAFKQHPDFDGFAKDFSDAGFKFLMKG 149

Query: 121 IASDMPDLQIDLSGLKK------------------------RDLDSDYSDLEE------- 161
           IA DM  LQIDLS +KK                        R+LDSDYSD+EE       
Sbjct: 150 IAVDMSHLQIDLSDIKKKYSEKWASGPNGTPGPQSLVDKYVRELDSDYSDVEEGDAPSQE 209

[Close]

BLAST of Moc04g39460.1 vs. ExPASy TrEMBL
Match: A0A6J1D971 (uncharacterized protein LOC111018538 OS=Momordica charantia OX=3673 GN=LOC111018538 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 5.1e-66
Identity = 146/188 (77.66%), Postives = 156/188 (82.98%), Query Frame = 0


Query: 1   MKDELLKAHSEVEILKAEVETKVELLKKEEDIRKAQLRAAHAITRGLEKDKFQLLKEKDD 60
           MKDELLKAHSEVE LKAEVE++ ELLKKEED R+AQLRAAHAITRGLE++KFQLLKEKDD
Sbjct: 113 MKDELLKAHSEVETLKAEVESQAELLKKEEDRRQAQLRAAHAITRGLEREKFQLLKEKDD 172

Query: 61  MLQALEAKDEELKHATAELETAKERLSNGVLLEESFRQHPDFDGFAKDFSDAGFKFLMKG 120
           MLQALEAKD+EL+HATAELETAKERLSNGVLLEE+FRQHPDFDGFAKDFSDAGFKFLMKG
Sbjct: 173 MLQALEAKDKELEHATAELETAKERLSNGVLLEEAFRQHPDFDGFAKDFSDAGFKFLMKG 232

Query: 121 IASDMPDLQIDLSGLKK------------------------RDLDSDYSDLEEDQVGTTQ 165
           IASDMPDLQIDLSGLK+                        RDLDSDYSD EEDQVG+TQ
Sbjct: 233 IASDMPDLQIDLSGLKRRYAEKWASGPGGTPGPQALVDQYVRDLDSDYSDPEEDQVGSTQ 292

[Close]

BLAST of Moc04g39460.1 vs. ExPASy TrEMBL
Match: A0A6J1DZB3 (uncharacterized protein LOC111025665 OS=Momordica charantia OX=3673 GN=LOC111025665 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 5.1e-50
Identity = 122/198 (61.62%), Postives = 140/198 (70.71%), Query Frame = 0


Query: 1   MKDELLKAHSEVEILKAEVETKVELLKKEEDIRKAQLRAAHAITRGLEKDKFQLLKEKDD 60
           +K ELLKA  EV+IL+AEV+ KV+LLKKE +  KA LRAAHAIT+GLEK+KFQLLKEKDD
Sbjct: 337 LKGELLKAQGEVDILRAEVDAKVDLLKKEGEKHKAHLRAAHAITKGLEKEKFQLLKEKDD 396

Query: 61  MLQALEAKDEELKHATAELETAKERLSNGVLLEESFRQHPDFDGFAKDFSDAGFKFLMKG 120
           + Q LE KD  +   T EL+  KERL+NG LLEESFRQHPDFDGFAKDFSDAGFKFLMKG
Sbjct: 397 LAQVLEEKDASIGRLTTELKDLKERLTNGTLLEESFRQHPDFDGFAKDFSDAGFKFLMKG 456

Query: 121 IASDMPDLQIDLSGLKK------------------------RDLDSDYSDLEED------ 165
           IA+DMP LQIDL+GLKK                        R+LDSDYSD+EE+      
Sbjct: 457 IAADMPHLQIDLNGLKKKYSEKWASGPNGTPDPQSLVDKYVRELDSDYSDMEEEDAPSQE 516

[Close]

BLAST of Moc04g39460.1 vs. ExPASy TrEMBL
Match: A0A6J1D1N9 (uncharacterized protein LOC111016193 OS=Momordica charantia OX=3673 GN=LOC111016193 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 3.7e-48
Identity = 117/192 (60.94%), Postives = 136/192 (70.83%), Query Frame = 0


Query: 1   MKDELLKAHSEVEILKAEVETKVELLKKEEDIRKAQLRAAHAITRGLEKDKFQLLKEKDD 60
           +K ELLKA  EV+IL+AEV+ K +LLKKE +  KA LRAAHAIT+GLEK+KFQLLKEKDD
Sbjct: 91  LKGELLKAQGEVDILRAEVDAKTDLLKKEGEKHKAHLRAAHAITKGLEKEKFQLLKEKDD 150

Query: 61  MLQALEAKDEELKHATAELETAKERLSNGVLLEESFRQHPDFDGFAKDFSDAGFKFLMKG 120
           + Q LE KD  +   T EL+  KERL++G LLEESFRQHP+FDGFAKDFSDAGFKFLMKG
Sbjct: 151 LAQVLEKKDASIGRLTTELKDLKERLTDGALLEESFRQHPNFDGFAKDFSDAGFKFLMKG 210

Query: 121 IASDMPDLQIDLSGLKK------------------------RDLDSDYSDLEED------ 161
           IA+DMP LQIDLS LKK                        R+LDSDYSD+EE+      
Sbjct: 211 IAADMPHLQIDLSDLKKRYSENWASGPNGTPGPQSLVDKYVRELDSDYSDMEEEDAPSQE 270

[Close]

BLAST of Moc04g39460.1 vs. ExPASy TrEMBL
Match: A0A6J1DF31 (uncharacterized protein LOC111019909 OS=Momordica charantia OX=3673 GN=LOC111019909 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 4.8e-48
Identity = 118/192 (61.46%), Postives = 134/192 (69.79%), Query Frame = 0


Query: 1   MKDELLKAHSEVEILKAEVETKVELLKKEEDIRKAQLRAAHAITRGLEKDKFQLLKEKDD 60
           +K ELLKA  EV IL+AEV+ K ELLKKE +  KA LRAAHAIT+GLEK+KFQLLKEKDD
Sbjct: 99  LKGELLKAQGEVGILRAEVDAKAELLKKEGEKHKAHLRAAHAITKGLEKEKFQLLKEKDD 158

Query: 61  MLQALEAKDEELKHATAELETAKERLSNGVLLEESFRQHPDFDGFAKDFSDAGFKFLMKG 120
           + Q LE KD  +   TAEL+  KERL+NG LLEESFRQH DFDGFAKDFSDAGFKFLMKG
Sbjct: 159 LAQVLEGKDTSIGRLTAELKDLKERLTNGSLLEESFRQHLDFDGFAKDFSDAGFKFLMKG 218

Query: 121 IASDMPDLQIDLSGLKK------------------------RDLDSDYSDLEED------ 161
           IA+DMP LQIDLS LKK                        R+LDSDYSD+EE+      
Sbjct: 219 IAADMPHLQIDLSNLKKKYSEKWASGPNGTPGPQSLVVKYVRELDSDYSDMEEEDAPSQE 278

[Close]

BLAST of Moc04g39460.1 vs. ExPASy TrEMBL
Match: A0A6J1DZB5 (uncharacterized protein LOC111024898 OS=Momordica charantia OX=3673 GN=LOC111024898 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 5.0e-45
Identity = 114/192 (59.38%), Postives = 133/192 (69.27%), Query Frame = 0


Query: 1   MKDELLKAHSEVEILKAEVETKVELLKKEEDIRKAQLRAAHAITRGLEKDKFQLLKEKDD 60
           MK ELLKA SEV ILKA+V+ K E+LKKE +  KA L AAHAIT+ +EK+KFQLLKEKDD
Sbjct: 30  MKSELLKARSEVGILKAKVDXKAEILKKEGEKHKAHLXAAHAITKXMEKEKFQLLKEKDD 89

Query: 61  MLQALEAKDEELKHATAELETAKERLSNGVLLEESFRQHPDFDGFAKDFSDAGFKFLMKG 120
           + QALE  D  +   + EL+ AKERL+NGVLLEE+F+QHPDFDGFAKDFSDAGFKFLMKG
Sbjct: 90  LAQALEETDALIGRLSXELKDAKERLTNGVLLEEAFKQHPDFDGFAKDFSDAGFKFLMKG 149

Query: 121 IASDMPDLQIDLSGLKK------------------------RDLDSDYSDLEE------- 161
           IA DM  LQIDLS +KK                        R+LDSDYSD+EE       
Sbjct: 150 IAVDMSHLQIDLSDIKKKYSEKWASGPNGTPGPQSLVDKYVRELDSDYSDVEEGDAPSQE 209

The following BLAST results are available for this feature:

BLAST of Moc04g39460.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150343.1	1.1e-65	77.66	uncharacterized protein LOC111018538 [Momordica charantia]	[more]
XP_022159252.1	1.1e-49	61.62	uncharacterized protein LOC111025665 [Momordica charantia]	[more]
XP_022147182.1	7.6e-48	60.94	uncharacterized protein LOC111016193 [Momordica charantia]	[more]
XP_022152119.1	9.9e-48	61.46	uncharacterized protein LOC111019909 [Momordica charantia]	[more]
XP_022158409.1	1.0e-44	59.38	uncharacterized protein LOC111024898 [Momordica charantia]	[more]

BLAST of Moc04g39460.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc04g39460.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D971	5.1e-66	77.66	uncharacterized protein LOC111018538 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1DZB3	5.1e-50	61.62	uncharacterized protein LOC111025665 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1D1N9	3.7e-48	60.94	uncharacterized protein LOC111016193 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A6J1DF31	4.8e-48	61.46	uncharacterized protein LOC111019909 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1DZB5	5.0e-45	59.38	uncharacterized protein LOC111024898 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]

BLAST of Moc04g39460.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 55..85
None	No IPR available	COILS	Coil	Coil	coord: 9..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..164

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Moc04g39460	Moc04g39460	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Moc04g39460.1.exon2	Moc04g39460.1.exon2	exon
Moc04g39460.1.exon1	Moc04g39460.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Moc04g39460.1	cds.Moc04g39460.1_2	CDS
cds.Moc04g39460.1	cds.Moc04g39460.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Moc04g39460.1	Moc04g39460.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups