Moc04g39400.1 (mRNA) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g39400.1
Type	mRNA
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	zinc finger protein 6-like
Location	chr4: 29270173 .. 29270646 (+)
Sequence length	474
RNA-Seq Expression	Moc04g39400.1
Synteny	Moc04g39400.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAACTCTCAGGTGAAGCTCTTTGGTTTCAACATCTCAGAATTAGAGGATAAAATAGCTTCAAATTATGCAGAACCACCGCCGCCGGAGTCGCCGGAATCTGAAAATCCCCATGCCCCGAAGTTTGAGTGCCAATATTGTTGCAGAGAGTTCTCAAATTCACAAGCTTTGGGCGGCCATCAAAACGCCCACAGAGAAGAAAGACAGCTCCTGAAGCGGGCCCACTTGAAATCTTGTCATCGTAATTATTACCTCTCAGCTTCGCACGTGCAGAGCTGGCTGTCGCCGTCCTTTGCCTCGGCGGCGGTGCCGACGGTGGTGGGTCCTTCTCCTCCGCCGCCTTCGACGTTTGCGCTGCGGCGGCATGCCGTAGTTTTGTCGCCGCCGGTCGGAATTGTAGGAGATGATGCTATTTCCGGTCGGAGTTTGGGCCTGGATTTAAGGCTTAGCCTTGGGCCTGGTAAGACTTGA

mRNA sequence

ATGGCCAACTCTCAGGTGAAGCTCTTTGGTTTCAACATCTCAGAATTAGAGGATAAAATAGCTTCAAATTATGCAGAACCACCGCCGCCGGAGTCGCCGGAATCTGAAAATCCCCATGCCCCGAAGTTTGAGTGCCAATATTGTTGCAGAGAGTTCTCAAATTCACAAGCTTTGGGCGGCCATCAAAACGCCCACAGAGAAGAAAGACAGCTCCTGAAGCGGGCCCACTTGAAATCTTGTCATCGTAATTATTACCTCTCAGCTTCGCACGTGCAGAGCTGGCTGTCGCCGTCCTTTGCCTCGGCGGCGGTGCCGACGGTGGTGGGTCCTTCTCCTCCGCCGCCTTCGACGTTTGCGCTGCGGCGGCATGCCGTAGTTTTGTCGCCGCCGGTCGGAATTGTAGGAGATGATGCTATTTCCGGTCGGAGTTTGGGCCTGGATTTAAGGCTTAGCCTTGGGCCTGGTAAGACTTGA

Coding sequence (CDS)

ATGGCCAACTCTCAGGTGAAGCTCTTTGGTTTCAACATCTCAGAATTAGAGGATAAAATAGCTTCAAATTATGCAGAACCACCGCCGCCGGAGTCGCCGGAATCTGAAAATCCCCATGCCCCGAAGTTTGAGTGCCAATATTGTTGCAGAGAGTTCTCAAATTCACAAGCTTTGGGCGGCCATCAAAACGCCCACAGAGAAGAAAGACAGCTCCTGAAGCGGGCCCACTTGAAATCTTGTCATCGTAATTATTACCTCTCAGCTTCGCACGTGCAGAGCTGGCTGTCGCCGTCCTTTGCCTCGGCGGCGGTGCCGACGGTGGTGGGTCCTTCTCCTCCGCCGCCTTCGACGTTTGCGCTGCGGCGGCATGCCGTAGTTTTGTCGCCGCCGGTCGGAATTGTAGGAGATGATGCTATTTCCGGTCGGAGTTTGGGCCTGGATTTAAGGCTTAGCCTTGGGCCTGGTAAGACTTGA

Protein sequence

MANSQVKLFGFNISELEDKIASNYAEPPPPESPESENPHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAHLKSCHRNYYLSASHVQSWLSPSFASAAVPTVVGPSPPPPSTFALRRHAVVLSPPVGIVGDDAISGRSLGLDLRLSLGPGKT

Homology

[Close]

BLAST of Moc04g39400.1 vs. NCBI nr
Match: XP_038886238.1 (zinc finger protein 6-like [Benincasa hispida])

HSP 1 Score: 187.6 bits (475), Expect = 8.3e-44
Identity = 105/167 (62.87%), Postives = 122/167 (73.05%), Query Frame = 0


Query: 1   MANSQVKLFGFNISELEDKIASNYAEPPPP-ESPESENPHAPKFECQYCCREFSNSQALG 60
           M  S++KLFGFNIS+ E K  SN  +PPP  E PESENPHAPKFECQYCCREFSNSQALG
Sbjct: 1   MPKSRLKLFGFNISK-EKKTVSNVTKPPPAMEWPESENPHAPKFECQYCCREFSNSQALG 60

Query: 61  GHQNAHREERQLLKRAHLKSCHRNYYLSASHVQSWLSPSFASAAVPTVVGPSPP------ 120
           GHQNAHREERQLLK A +KSCHRN Y++A HVQ+WLS SF    +P VVG  P       
Sbjct: 61  GHQNAHREERQLLKSAQMKSCHRN-YITALHVQNWLSSSFPPPPLPAVVGGPPSTAEMIY 120

Query: 121 ----PPSTFALRRHAVVLSPPVGIVGDDAISGRSLGLDLRLSLGPGK 157
               P  +  +RR A  L+  +G+VGD+ +SG SLGLDL+LSLGPGK
Sbjct: 121 AMSRPLLSQEVRRQAGDLTGVIGVVGDEDVSGWSLGLDLQLSLGPGK 165

[Close]

BLAST of Moc04g39400.1 vs. NCBI nr
Match: XP_022939247.1 (zinc finger protein 6-like [Cucurbita moschata])

HSP 1 Score: 179.9 bits (455), Expect = 1.7e-41
Identity = 102/170 (60.00%), Postives = 116/170 (68.24%), Query Frame = 0


Query: 1   MANSQVKLFGFNISELEDKIASNYAEPPPPESPESENPHAPKFECQYCCREFSNSQALGG 60
           MANSQ+KLFGFNISE + K  SN+ EPPP E PES  PHAPKFECQYCCR FSNSQALGG
Sbjct: 1   MANSQLKLFGFNISE-DHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGG 60

Query: 61  HQNAHREERQLLKRAHLKSCHRNYYLSASHVQSWLSPSFASAAVPTVVGPSPP--PPSTF 120
           HQNAHREER+LLKRA +KSCH NY+ +  H+ +WLS SFA         P PP  PP   
Sbjct: 61  HQNAHREERRLLKRAQIKSCHLNYF-TPLHLHNWLSSSFA---------PQPPSIPPQAA 120

Query: 121 ALR------------RHAVVLSPPVGIVGDDAISGRSLGLDLRLSLGPGK 157
            L             R A V++  VG VGD+A+ GR LGLDL+LSLGP K
Sbjct: 121 GLHAMSRPLLSQDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSK 159

[Close]

BLAST of Moc04g39400.1 vs. NCBI nr
Match: KAG6578343.1 (Zinc finger protein 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 179.1 bits (453), Expect = 3.0e-41
Identity = 101/170 (59.41%), Postives = 115/170 (67.65%), Query Frame = 0


Query: 1   MANSQVKLFGFNISELEDKIASNYAEPPPPESPESENPHAPKFECQYCCREFSNSQALGG 60
           MANSQ+KLFGFNISE + K  SN+ EPPP E PES  PHAPKFECQYCCR FSNSQALGG
Sbjct: 1   MANSQLKLFGFNISE-DHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGG 60

Query: 61  HQNAHREERQLLKRAHLKSCHRNYYLSASHVQSWLSPSFASAAVPTVVGPSPPPPSTFAL 120
           HQNAHREER+LLKRA +KSCH NY+ +  HVQ+WLS SF          P PP     A 
Sbjct: 61  HQNAHREERRLLKRAQIKSCHLNYF-TPLHVQNWLSSSFV---------PKPPSTPLQAA 120

Query: 121 RRHAV--------------VLSPPVGIVGDDAISGRSLGLDLRLSLGPGK 157
             HA+              V++  VG VGD+A+ GR LGLDL+LSLGP K
Sbjct: 121 GLHAMSRPLLSQDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSK 159

[Close]

BLAST of Moc04g39400.1 vs. NCBI nr
Match: XP_023550962.1 (zinc finger protein 6-like [Cucurbita pepo subsp. pepo] >KAG7015922.1 Zinc finger protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 179.1 bits (453), Expect = 3.0e-41
Identity = 101/170 (59.41%), Postives = 115/170 (67.65%), Query Frame = 0


Query: 1   MANSQVKLFGFNISELEDKIASNYAEPPPPESPESENPHAPKFECQYCCREFSNSQALGG 60
           MANSQ+KLFGFNISE + K  SN+ EPPP E PES  PHAPKFECQYCCR FSNSQALGG
Sbjct: 1   MANSQLKLFGFNISE-DHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGG 60

Query: 61  HQNAHREERQLLKRAHLKSCHRNYYLSASHVQSWLSPSFASAAVPTVVGPSPPPPSTFAL 120
           HQNAHREER+LLKRA +KSCH NY+ +  HVQ+WLS SF          P PP     A 
Sbjct: 61  HQNAHREERRLLKRAQIKSCHLNYF-TPLHVQNWLSSSFV---------PQPPSTPLQAA 120

Query: 121 RRHAV--------------VLSPPVGIVGDDAISGRSLGLDLRLSLGPGK 157
             HA+              V++  VG VGD+A+ GR LGLDL+LSLGP K
Sbjct: 121 GLHAMSRPLLSQDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSK 159

[Close]

BLAST of Moc04g39400.1 vs. NCBI nr
Match: XP_022993371.1 (zinc finger protein 6-like [Cucurbita maxima])

HSP 1 Score: 178.7 bits (452), Expect = 3.9e-41
Identity = 98/161 (60.87%), Postives = 117/161 (72.67%), Query Frame = 0


Query: 1   MANSQVKLFGFNISELEDKIASNYAEPPPPESPESENPHAPKFECQYCCREFSNSQALGG 60
           MANSQ+KLFGFNISE  + + SN+ EPPP E PES  PHAPKFECQYCCR FSNSQALGG
Sbjct: 1   MANSQLKLFGFNISEHHNSV-SNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGG 60

Query: 61  HQNAHREERQLLKRAHLKSCHRNYYLSASHVQSWLSPSFASAAVPTVVGPS-----PPPP 120
           HQNAHREER+LLKRA +KSCH NY+ +  HV++WLS SF      T +  +       PP
Sbjct: 61  HQNAHREERRLLKRAQIKSCHLNYF-TPLHVRNWLSSSFVPQPPSTPLQAAGLHAMSRPP 120

Query: 121 STFALRRHAVVLSPPVGIVGDDAISGRSLGLDLRLSLGPGK 157
            +  + R A V++  VG VGD+A+ GR LGLDL+LSLGP K
Sbjct: 121 LSQDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSK 159

[Close]

BLAST of Moc04g39400.1 vs. ExPASy Swiss-Prot
Match: Q39265 (Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-14
Identity = 53/117 (45.30%), Postives = 70/117 (59.83%), Query Frame = 0


Query: 4   SQVKLFGFNISELEDKIASNYAEPPPPESPESENPHAPKFECQYCCREFSNSQALGGHQN 63
           S +KLFG N+ E    + +  +EP P     SE   + K+ECQYCCREF+NSQALGGHQN
Sbjct: 6   SSLKLFGINLLE-TTSVQNQSSEPRPGSGSGSE---SRKYECQYCCREFANSQALGGHQN 65

Query: 64  AHREERQLLKRAHLKSC-----HRNYYLSASHVQSWLSPSFASAAVPTVVGPSPPPP 116
           AH++ERQLLKRA + +      H N++    H    LS   A A +P ++    PPP
Sbjct: 66  AHKKERQLLKRAQMLATRGLPRHHNFH---PHTNPLLS---AFAPLPHLLSQPHPPP 112

[Close]

BLAST of Moc04g39400.1 vs. ExPASy Swiss-Prot
Match: Q9C9H1 (Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 7.4e-11
Identity = 36/67 (53.73%), Postives = 46/67 (68.66%), Query Frame = 0


Query: 42  KFECQYCCREFSNSQALGGHQNAHREERQLLKRAHLKSCHR---NYYLSASHVQSWLSPS 101
           K+ECQYCCREF NSQALGGHQNAH++ERQ LKRA L++      N+  + S  Q   +P 
Sbjct: 72  KYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQATRNAAANFSNAGSASQFLRNPI 131

Query: 102 FASAAVP 106
            ++ A P
Sbjct: 132 VSAFAPP 138

[Close]

BLAST of Moc04g39400.1 vs. ExPASy Swiss-Prot
Match: Q9FG05 (Zinc finger protein GIS2 OS=Arabidopsis thaliana OX=3702 GN=GIS2 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.3e-07
Identity = 36/76 (47.37%), Postives = 45/76 (59.21%), Query Frame = 0


Query: 6  VKLFGFNI--SELEDKIASNYAEPPPPESPESENPHAPKFECQYCCREFSNSQALGGHQN 65
          ++LFGF    S  E +   NY E    ES + +N    +F+C YC R F  SQALGGHQN
Sbjct: 19 IRLFGFEFGASHEESESKDNYNE--NNESIKDDNKE-KRFKCHYCFRNFPTSQALGGHQN 78

Query: 66 AHREERQLLKRAHLKS 80
          AH+ ERQ  KR +L S
Sbjct: 79 AHKRERQQTKRFNLHS 91

[Close]

BLAST of Moc04g39400.1 vs. ExPASy Swiss-Prot
Match: Q84WI0 (Zinc finger protein GIS OS=Arabidopsis thaliana OX=3702 GN=GIS PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 5.0e-07
Identity = 31/66 (46.97%), Postives = 36/66 (54.55%), Query Frame = 0


Query: 39  HAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAHLKSCHR--NYYLSASHVQSWLS 98
           H  +FEC YC R F  SQALGGHQNAH+ ERQL KR      +   N   S  H  SW +
Sbjct: 87  HNRRFECHYCFRNFPTSQALGGHQNAHKRERQLAKRGVSSYFYHPDNNPYSYRHYPSWTN 146

Query: 99  PSFASA 103
               +A
Sbjct: 147 GPLTAA 152

[Close]

BLAST of Moc04g39400.1 vs. ExPASy Swiss-Prot
Match: Q39264 (Zinc finger protein 5 OS=Arabidopsis thaliana OX=3702 GN=ZFP5 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 6.5e-07
Identity = 34/88 (38.64%), Postives = 49/88 (55.68%), Query Frame = 0


Query: 2   ANSQVKLFGFNISELEDKIASNYAEPPPPESPESENPHAPKFECQYCCREFSNSQALGGH 61
           ++  +KLFGF +           AE     +  +      + ECQYC +EF+NSQALGGH
Sbjct: 19  SDKTIKLFGFELISGSRTPEITTAESVSSSTNTTSLTVMKRHECQYCGKEFANSQALGGH 78

Query: 62  QNAHREERQLLKRAHLKSCHRN--YYLS 88
           QNAH++ER   KR  L++   +  YYL+
Sbjct: 79  QNAHKKERLKKKRLQLQARRASIGYYLT 106

[Close]

BLAST of Moc04g39400.1 vs. ExPASy TrEMBL
Match: A0A6J1FG99 (zinc finger protein 6-like OS=Cucurbita moschata OX=3662 GN=LOC111445220 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 8.4e-42
Identity = 102/170 (60.00%), Postives = 116/170 (68.24%), Query Frame = 0


Query: 1   MANSQVKLFGFNISELEDKIASNYAEPPPPESPESENPHAPKFECQYCCREFSNSQALGG 60
           MANSQ+KLFGFNISE + K  SN+ EPPP E PES  PHAPKFECQYCCR FSNSQALGG
Sbjct: 1   MANSQLKLFGFNISE-DHKSVSNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGG 60

Query: 61  HQNAHREERQLLKRAHLKSCHRNYYLSASHVQSWLSPSFASAAVPTVVGPSPP--PPSTF 120
           HQNAHREER+LLKRA +KSCH NY+ +  H+ +WLS SFA         P PP  PP   
Sbjct: 61  HQNAHREERRLLKRAQIKSCHLNYF-TPLHLHNWLSSSFA---------PQPPSIPPQAA 120

Query: 121 ALR------------RHAVVLSPPVGIVGDDAISGRSLGLDLRLSLGPGK 157
            L             R A V++  VG VGD+A+ GR LGLDL+LSLGP K
Sbjct: 121 GLHAMSRPLLSQDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSK 159

[Close]

BLAST of Moc04g39400.1 vs. ExPASy TrEMBL
Match: A0A6J1JW51 (zinc finger protein 6-like OS=Cucurbita maxima OX=3661 GN=LOC111489415 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.9e-41
Identity = 98/161 (60.87%), Postives = 117/161 (72.67%), Query Frame = 0


Query: 1   MANSQVKLFGFNISELEDKIASNYAEPPPPESPESENPHAPKFECQYCCREFSNSQALGG 60
           MANSQ+KLFGFNISE  + + SN+ EPPP E PES  PHAPKFECQYCCR FSNSQALGG
Sbjct: 1   MANSQLKLFGFNISEHHNSV-SNFTEPPPAELPESRYPHAPKFECQYCCRGFSNSQALGG 60

Query: 61  HQNAHREERQLLKRAHLKSCHRNYYLSASHVQSWLSPSFASAAVPTVVGPS-----PPPP 120
           HQNAHREER+LLKRA +KSCH NY+ +  HV++WLS SF      T +  +       PP
Sbjct: 61  HQNAHREERRLLKRAQIKSCHLNYF-TPLHVRNWLSSSFVPQPPSTPLQAAGLHAMSRPP 120

Query: 121 STFALRRHAVVLSPPVGIVGDDAISGRSLGLDLRLSLGPGK 157
            +  + R A V++  VG VGD+A+ GR LGLDL+LSLGP K
Sbjct: 121 LSQDVWRQAGVITGAVGGVGDEAVPGRGLGLDLQLSLGPSK 159

[Close]

BLAST of Moc04g39400.1 vs. ExPASy TrEMBL
Match: A0A0A0LQ31 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G404810 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 3.7e-21
Identity = 57/86 (66.28%), Postives = 69/86 (80.23%), Query Frame = 0


Query: 1   MANSQVKLFGFNISELEDKIASNYAEPP-PPESPESENPHAPKFECQYCCREFSNSQALG 60
           ++NS +KLFGF+IS+ E+K  SN+ EPP   ESPESEN   PKFEC+YCCR+FSNSQALG
Sbjct: 34  VSNSHLKLFGFSISK-ENKRVSNFKEPPLTVESPESENSFPPKFECRYCCRQFSNSQALG 93

Query: 61  GHQNAHREERQLLKRAHLKSCHRNYY 86
           GHQNAH+EERQLLK   +K   RNY+
Sbjct: 94  GHQNAHKEERQLLKTPQIKYFRRNYF 118

[Close]

BLAST of Moc04g39400.1 vs. ExPASy TrEMBL
Match: A0A5C7INM9 (C2H2-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_005001 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 6.5e-18
Identity = 70/170 (41.18%), Postives = 97/170 (57.06%), Query Frame = 0


Query: 4   SQVKLFGFNISELEDKIASNYAEPPPPESPESENPH------APKFECQYCCREFSNSQA 63
           + +KLFGFN+SE  +K   N +E P     +S + H      + K+ECQYCCREF+NSQA
Sbjct: 16  TSLKLFGFNLSENYNK---NSSETPSESLDQSGSFHQSDDIFSRKYECQYCCREFANSQA 75

Query: 64  LGGHQNAHREERQLLKRAHLKSCHRNYYLSASHVQSWLSPSF-------ASAAVPTVVGP 123
           LGGHQNAH++ERQLLKRA L++       S+S+ +  + P+F       A    P V  P
Sbjct: 76  LGGHQNAHKKERQLLKRAQLQATRNILAASSSYFRYPMIPAFTPPPRLLAPRVAPMVAPP 135

Query: 124 SPPPPSTFALRRHAVVLSPPVGIV-GDDAISG-----RSLGLDLRLSLGP 155
           +    S+F +   +    PP+ +  G  A+ G     +SL LDL LSLGP
Sbjct: 136 THYNSSSFYVLHGSAAAVPPLQVSNGFTAVDGGSRMDKSLALDLHLSLGP 182

[Close]

BLAST of Moc04g39400.1 vs. ExPASy TrEMBL
Match: A0A6P4A6M4 (zinc finger protein 6 OS=Ziziphus jujuba OX=326968 GN=LOC107417345 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.9e-17
Identity = 61/135 (45.19%), Postives = 88/135 (65.19%), Query Frame = 0


Query: 6   VKLFGFNISELEDKIASNYAEPPPPESPESENPHAPKFECQYCCREFSNSQALGGHQNAH 65
           +KLFGFNISE ++ + +  +   P ES +S++ H  K+ECQYC REF+NSQALGGHQNAH
Sbjct: 11  IKLFGFNISE-DNDLNTTRSSSSPSESQDSDH-HQRKYECQYCFREFANSQALGGHQNAH 70

Query: 66  REERQLLKRAHLKSCH--RNYYLSASHVQSWLSPSFASAAVPTVVGPSPP----PPSTFA 125
           ++ERQLLKRA +++ +  RN+  S  HV + +  +F S     ++GP+PP      S F 
Sbjct: 71  KKERQLLKRAQMQASNASRNFSASGHHVHNPMISAFMSPPPRHILGPAPPAHPQDSSWFY 130

Query: 126 LRRHAVVLSPPVGIV 135
           +  HA    PP+ +V
Sbjct: 131 MSSHA----PPLHVV 139

[Close]

BLAST of Moc04g39400.1 vs. TAIR 10
Match: AT1G67030.1 (zinc finger protein 6 )

HSP 1 Score: 81.3 bits (199), Expect = 7.8e-16
Identity = 53/117 (45.30%), Postives = 70/117 (59.83%), Query Frame = 0


Query: 4   SQVKLFGFNISELEDKIASNYAEPPPPESPESENPHAPKFECQYCCREFSNSQALGGHQN 63
           S +KLFG N+ E    + +  +EP P     SE   + K+ECQYCCREF+NSQALGGHQN
Sbjct: 6   SSLKLFGINLLE-TTSVQNQSSEPRPGSGSGSE---SRKYECQYCCREFANSQALGGHQN 65

Query: 64  AHREERQLLKRAHLKSC-----HRNYYLSASHVQSWLSPSFASAAVPTVVGPSPPPP 116
           AH++ERQLLKRA + +      H N++    H    LS   A A +P ++    PPP
Sbjct: 66  AHKKERQLLKRAQMLATRGLPRHHNFH---PHTNPLLS---AFAPLPHLLSQPHPPP 112

[Close]

BLAST of Moc04g39400.1 vs. TAIR 10
Match: AT1G68360.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 68.6 bits (166), Expect = 5.3e-12
Identity = 36/67 (53.73%), Postives = 46/67 (68.66%), Query Frame = 0


Query: 42  KFECQYCCREFSNSQALGGHQNAHREERQLLKRAHLKSCHR---NYYLSASHVQSWLSPS 101
           K+ECQYCCREF NSQALGGHQNAH++ERQ LKRA L++      N+  + S  Q   +P 
Sbjct: 72  KYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQATRNAAANFSNAGSASQFLRNPI 131

Query: 102 FASAAVP 106
            ++ A P
Sbjct: 132 VSAFAPP 138

[Close]

BLAST of Moc04g39400.1 vs. TAIR 10
Match: AT5G06650.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 57.8 bits (138), Expect = 9.3e-09
Identity = 36/76 (47.37%), Postives = 45/76 (59.21%), Query Frame = 0


Query: 6  VKLFGFNI--SELEDKIASNYAEPPPPESPESENPHAPKFECQYCCREFSNSQALGGHQN 65
          ++LFGF    S  E +   NY E    ES + +N    +F+C YC R F  SQALGGHQN
Sbjct: 19 IRLFGFEFGASHEESESKDNYNE--NNESIKDDNKE-KRFKCHYCFRNFPTSQALGGHQN 78

Query: 66 AHREERQLLKRAHLKS 80
          AH+ ERQ  KR +L S
Sbjct: 79 AHKRERQQTKRFNLHS 91

[Close]

BLAST of Moc04g39400.1 vs. TAIR 10
Match: AT3G58070.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 55.8 bits (133), Expect = 3.5e-08
Identity = 31/66 (46.97%), Postives = 36/66 (54.55%), Query Frame = 0


Query: 39  HAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAHLKSCHR--NYYLSASHVQSWLS 98
           H  +FEC YC R F  SQALGGHQNAH+ ERQL KR      +   N   S  H  SW +
Sbjct: 87  HNRRFECHYCFRNFPTSQALGGHQNAHKRERQLAKRGVSSYFYHPDNNPYSYRHYPSWTN 146

Query: 99  PSFASA 103
               +A
Sbjct: 147 GPLTAA 152

[Close]

BLAST of Moc04g39400.1 vs. TAIR 10
Match: AT1G10480.1 (zinc finger protein 5 )

HSP 1 Score: 55.5 bits (132), Expect = 4.6e-08
Identity = 34/88 (38.64%), Postives = 49/88 (55.68%), Query Frame = 0


Query: 2   ANSQVKLFGFNISELEDKIASNYAEPPPPESPESENPHAPKFECQYCCREFSNSQALGGH 61
           ++  +KLFGF +           AE     +  +      + ECQYC +EF+NSQALGGH
Sbjct: 19  SDKTIKLFGFELISGSRTPEITTAESVSSSTNTTSLTVMKRHECQYCGKEFANSQALGGH 78

Query: 62  QNAHREERQLLKRAHLKSCHRN--YYLS 88
           QNAH++ER   KR  L++   +  YYL+
Sbjct: 79  QNAHKKERLKKKRLQLQARRASIGYYLT 106

The following BLAST results are available for this feature:

BLAST of Moc04g39400.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886238.1	8.3e-44	62.87	zinc finger protein 6-like [Benincasa hispida]	[more]
XP_022939247.1	1.7e-41	60.00	zinc finger protein 6-like [Cucurbita moschata]	[more]
KAG6578343.1	3.0e-41	59.41	Zinc finger protein 6, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023550962.1	3.0e-41	59.41	zinc finger protein 6-like [Cucurbita pepo subsp. pepo] >KAG7015922.1 Zinc finge...	[more]
XP_022993371.1	3.9e-41	60.87	zinc finger protein 6-like [Cucurbita maxima]	[more]

BLAST of Moc04g39400.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39265	1.1e-14	45.30	Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1	[more]
Q9C9H1	7.4e-11	53.73	Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1	[more]
Q9FG05	1.3e-07	47.37	Zinc finger protein GIS2 OS=Arabidopsis thaliana OX=3702 GN=GIS2 PE=2 SV=1	[more]
Q84WI0	5.0e-07	46.97	Zinc finger protein GIS OS=Arabidopsis thaliana OX=3702 GN=GIS PE=1 SV=1	[more]
Q39264	6.5e-07	38.64	Zinc finger protein 5 OS=Arabidopsis thaliana OX=3702 GN=ZFP5 PE=1 SV=1	[more]

BLAST of Moc04g39400.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FG99	8.4e-42	60.00	zinc finger protein 6-like OS=Cucurbita moschata OX=3662 GN=LOC111445220 PE=4 SV...	[more]
A0A6J1JW51	1.9e-41	60.87	zinc finger protein 6-like OS=Cucurbita maxima OX=3661 GN=LOC111489415 PE=4 SV=1	[more]
A0A0A0LQ31	3.7e-21	66.28	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G404810 P...	[more]
A0A5C7INM9	6.5e-18	41.18	C2H2-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_00500...	[more]
A0A6P4A6M4	1.9e-17	45.19	zinc finger protein 6 OS=Ziziphus jujuba OX=326968 GN=LOC107417345 PE=4 SV=1	[more]

BLAST of Moc04g39400.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67030.1	7.8e-16	45.30	zinc finger protein 6	[more]
AT1G68360.1	5.3e-12	53.73	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G06650.1	9.3e-09	47.37	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT3G58070.1	3.5e-08	46.97	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G10480.1	4.6e-08	38.64	zinc finger protein 5	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..39
None	No IPR available	PANTHER	PTHR46353:SF9	ZINC FINGER PROTEIN GIS3	coord: 3..124
IPR044299	Zinc finger protein GIS3/ZFP5/ZFP6	PANTHER	PTHR46353	ZINC FINGER PROTEIN 5	coord: 3..124
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 45..65
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 43..70 score: 11.551563
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 42..70

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Moc04g39400	Moc04g39400	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Moc04g39400.1.exon1	Moc04g39400.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Moc04g39400.1	cds.Moc04g39400.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Moc04g39400.1	Moc04g39400.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010090	trichome morphogenesis
biological_process	GO:0009736	cytokinin-activated signaling pathway
biological_process	GO:0009740	gibberellic acid mediated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding