Moc04g20600.1 (mRNA) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g20600.1
Type	mRNA
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr4: 14958957 .. 14959411 (+)
Sequence length	207
RNA-Seq Expression	Moc04g20600.1
Synteny	Moc04g20600.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGTAACTTATTTCATGCTAACTGACCCGTATACTCACGACTTCCCCTGATCATGTTCTTTAATCTTAGGACCTTACGATGTGTAGGCAGCCTAATGGCTTCGCAATGGATCAGTTAGGTGATCATGAATCTCGAGTGAGTGTAATTCAGGTAACTACCTTCTAGTGTGCTAGTATACTTTCATGTTAGTATATTATAAGCTGATGCACTTTGTTATATATCAGAATCTCACTATCGATAGGCAACCCGATGGTCCATCAGACAGGCGATCCACTAGGCGACTCGATAGGCATCCCAATATGCAACACGATGTACCACCGCAAGTGATCGTTAAGGTAAACTTAATATCATATATTTTGTCATTTGTACTTTACCTGCTCTCATGTTAAATTGTGTCGTCTTGAACTCATCAACTGTGGTTTAAGTTAAACCTGACCTTCACGAAGCCCTAA

mRNA sequence

ATGAGGCAGCCTAATGGCTTCGCAATGGATCAGTTAGGTGATCATGAATCTCGAGTGAGTGTAATTCAGAATCTCACTATCGATAGGCAACCCGATGGTCCATCAGACAGGCGATCCACTAGGCGACTCGATAGGCATCCCAATATGCAACACGATGTACCACCGCAAGTGATCGTTAAGTTAAACCTGACCTTCACGAAGCCCTAA

Coding sequence (CDS)

ATGAGGCAGCCTAATGGCTTCGCAATGGATCAGTTAGGTGATCATGAATCTCGAGTGAGTGTAATTCAGAATCTCACTATCGATAGGCAACCCGATGGTCCATCAGACAGGCGATCCACTAGGCGACTCGATAGGCATCCCAATATGCAACACGATGTACCACCGCAAGTGATCGTTAAGTTAAACCTGACCTTCACGAAGCCCTAA

Protein sequence

MRQPNGFAMDQLGDHESRVSVIQNLTIDRQPDGPSDRRSTRRLDRHPNMQHDVPPQVIVKLNLTFTKP

Homology

The following BLAST results are available for this feature:

BLAST of Moc04g20600.1 vs.


Match Name	E-value	Identity	Description

BLAST of Moc04g20600.1 vs.


Match Name	E-value	Identity	Description

BLAST of Moc04g20600.1 vs.


Match Name	E-value	Identity	Description

BLAST of Moc04g20600.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..52

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Moc04g20600	Moc04g20600	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Moc04g20600.1.exon1	Moc04g20600.1.exon1	exon
Moc04g20600.1.exon2	Moc04g20600.1.exon2	exon
Moc04g20600.1.exon3	Moc04g20600.1.exon3	exon
Moc04g20600.1.exon4	Moc04g20600.1.exon4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Moc04g20600.1	cds.Moc04g20600.1	CDS
cds.Moc04g20600.1	cds.Moc04g20600.1_2	CDS
cds.Moc04g20600.1	cds.Moc04g20600.1_3	CDS
cds.Moc04g20600.1	cds.Moc04g20600.1_4	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Moc04g20600.1	Moc04g20600.1-protein	polypeptide