Moc02g12780.1 (mRNA) Bitter gourd (OHB3-1) v2

Overview


Name	Moc02g12780.1
Type	mRNA
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr2: 9361555 .. 9362941 (+)
Sequence length	561
RNA-Seq Expression	Moc02g12780.1
Synteny	Moc02g12780.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGTAAGAGTACCCCTGAAGTTTAAATGGCCAACTATGCAGCGATATGACGACACTAAAAATTCATGGGATCGTGTCGAAACATTCAGCGGATGGATGGATCTGTAGGGGGGCCCAGGATGAAATTATGCATCGGTCGTTCTATTTAATCTTCATAGGACCCAATAGTATTTTGTATCCATGGCTTAATGACAATCAATCACCTCATTCCAAAAATTAATATGAGCCTTTTTTACTCAATTCGTTGGTGGGCGAGAACAAAAGAGACCCACCACTATTTACACTTCGCCAATGAATAGATGAAAGTCTTGAGACTATGAGATGTGATTCAACAACGAAGCCCTCAAAGTAGATGATATAGCCTTGACAGCTATCATGGCAGAGCTCGAGACCAAAAGTCGTGATAGCTCAAATGGTATAGCCATGACAACTATCATAGTAGGGCACCAGGAACAAAAAGTCTTGTGGTCCCTAGGGGAGAAAACTTTGGTCACCTTTGATAAGTTTATCTCTCAATTACAGTGACATGCAAACGTCGGAAAACTACTCGATGTAAAGAGGATAACATCTCTTCCTAAGGTCTTCCGTTAAAGATGCACTTAGTTCTTCTGGAGGTTTTCCATGACGATATGCTGAACTTTTCTTGAGGATGCAATGAACTCTTTTTGAGGTCGGTCAAGCAGGACGACCATGCCCTCGGCCACCTCTACCATATGATAAGGTGGCCATAGGTATGCACCTCAGCCTCGAGTACCACATTTGCCGCGAGCGTTACCTCATCCTAGAGTACTACTTCGGCCTCGAGAAACACCTTGGCCTCGAGAACCACCTCGACCTCAAATATGCATCTCAGCCACGAGAATTTACCTCGGCCACGAGAATTCACAAGGCGGCCATGCCCTTGGCAAGTGCGGCCCATGAGGCCGTGCCACCTTCTCAACTCCAAGGGAGTGCGACCCCCACGATCGAGCAACCATTTTCCACACCTGGCAAACATGACTCTCGTGGCTCCACCCCCTTGTGGCCACTCAAACAATGTAAAATGCATGAATGTTGAATTGAGTAGAGGTATTGCAATGACGTGAATCACGTCCATATAAATAGTGGTGCGACCCACACATCTGCACAATCCCATCTCCAAAACCAAATATACTGGGCTAAAGAATCACTTCTCATCCGGAAGCCCCTCTTTTAAGTAAGAAGTGATAGAGACGGCTCACACTCAGGAGTGAAGGCTGCTGTTAGGGGTATGACTCGGAATGCACGACCCCATGCTTTAGGTGCAACCAACATGGTCGCACCTTCTCCAAGGAATGAGCGAGGCCTTCATGGCCGTGCCTCCTCCCATAGTGACCCCCTTGCACGGTCTATGTCACCTACATAG

mRNA sequence

ATGGCTGTCGGTCAAGCAGGACGACCATGCCCTCGGCCACCTCTACCATATGATAAGGTGGCCATAGGTATGCACCTCAGCCTCGAGTACCACATTTGCCGCGAGCGTTACCTCATCCTAGAGTACTACTTCGGCCTCGAGAAACACCTTGGCCTCGAGAACCACCTCGACCTCAAATATGCATCTCAGCCACGAGAATTTACCTCGGCCACGAGAATTCACAAGGCGGCCATGCCCTTGGCAAGTGCGGCCCATGAGGCCGTGCCACCTTCTCAACTCCAAGGGAGTGCGACCCCCACGATCGAGCAACCATTTTCCACACCTGGCAAACATGACTCTCGTGGCTCCACCCCCTTGTGGCCACTCAAACAATTAAGAAGTGATAGAGACGGCTCACACTCAGGAGTGAAGGCTGCTGTTAGGGGTATGACTCGGAATGCACGACCCCATGCTTTAGGTGCAACCAACATGGTCGCACCTTCTCCAAGGAATGAGCGAGGCCTTCATGGCCGTGCCTCCTCCCATAGTGACCCCCTTGCACGGTCTATGTCACCTACATAG

Coding sequence (CDS)

ATGGCTGTCGGTCAAGCAGGACGACCATGCCCTCGGCCACCTCTACCATATGATAAGGTGGCCATAGGTATGCACCTCAGCCTCGAGTACCACATTTGCCGCGAGCGTTACCTCATCCTAGAGTACTACTTCGGCCTCGAGAAACACCTTGGCCTCGAGAACCACCTCGACCTCAAATATGCATCTCAGCCACGAGAATTTACCTCGGCCACGAGAATTCACAAGGCGGCCATGCCCTTGGCAAGTGCGGCCCATGAGGCCGTGCCACCTTCTCAACTCCAAGGGAGTGCGACCCCCACGATCGAGCAACCATTTTCCACACCTGGCAAACATGACTCTCGTGGCTCCACCCCCTTGTGGCCACTCAAACAATTAAGAAGTGATAGAGACGGCTCACACTCAGGAGTGAAGGCTGCTGTTAGGGGTATGACTCGGAATGCACGACCCCATGCTTTAGGTGCAACCAACATGGTCGCACCTTCTCCAAGGAATGAGCGAGGCCTTCATGGCCGTGCCTCCTCCCATAGTGACCCCCTTGCACGGTCTATGTCACCTACATAG

Protein sequence

MAVGQAGRPCPRPPLPYDKVAIGMHLSLEYHICRERYLILEYYFGLEKHLGLENHLDLKYASQPREFTSATRIHKAAMPLASAAHEAVPPSQLQGSATPTIEQPFSTPGKHDSRGSTPLWPLKQLRSDRDGSHSGVKAAVRGMTRNARPHALGATNMVAPSPRNERGLHGRASSHSDPLARSMSPT

Homology

The following BLAST results are available for this feature:

BLAST of Moc02g12780.1 vs.


Match Name	E-value	Identity	Description

BLAST of Moc02g12780.1 vs.


Match Name	E-value	Identity	Description

BLAST of Moc02g12780.1 vs.


Match Name	E-value	Identity	Description

BLAST of Moc02g12780.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..113

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Moc02g12780	Moc02g12780	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Moc02g12780.1.exon1	Moc02g12780.1.exon1	exon
Moc02g12780.1.exon2	Moc02g12780.1.exon2	exon
Moc02g12780.1.exon3	Moc02g12780.1.exon3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Moc02g12780.1	cds.Moc02g12780.1	CDS
cds.Moc02g12780.1	cds.Moc02g12780.1_2	CDS
cds.Moc02g12780.1	cds.Moc02g12780.1_3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Moc02g12780.1	Moc02g12780.1-protein	polypeptide