Moc01g27630.1 (mRNA) Bitter gourd (OHB3-1) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTGCTGGGGAAGCGTCCTCGCCCTCCGATCAAGAGAACCGCCAGTATGACCGGAATCACGCCGGATCTACCCGACGTCGAACCAGAAGAGCCGTCCGATCAAAATCACGACCTAATTACTGATCCCCGCGCCACGGCGGCTGCACAAATACGCCACCTCGCCATTCCGGCCCAAACTACCATCGCCAATCCAAGAAATCCGTCGCCACGTGATCTCGTGCAGCCACCTCCCGATCACTTCCTCCGCACGTGCGGCCTCTGCAAACGCCGCCTCGTTGCCGGCCGCGACATCTACATGTACAGGTAGGTAGAGGTACACACCGAGAGCAAATTATTTATCATTTTCCTTCTGAGTATCTTTATATATATATTTTTTTAAAATTATTGATTCGATGTCACGTGCAGAGGAGACACTGCGTTTTGTAGTTCGGAGTGCAGAGAGAAGCAAATAAAACAAGACGAGAGAAGAGAGGTGTACGGAGCGGCAGGGTCGAAGAAGAAAGATGAGCGGCATGCGCCGTTGTCGACGGCGGCCGGGAGGGGGTCGAGGAAGGGCCAAGACGGTGGCGGCCGCTTATGA ATGCTGCTGGGGAAGCGTCCTCGCCCTCCGATCAAGAGAACCGCCAGTATGACCGGAATCACGCCGGATCTACCCGACGTCGAACCAGAAGAGCCGTCCGATCAAAATCACGACCTAATTACTGATCCCCGCGCCACGGCGGCTGCACAAATACGCCACCTCGCCATTCCGGCCCAAACTACCATCGCCAATCCAAGAAATCCGTCGCCACGTGATCTCGTGCAGCCACCTCCCGATCACTTCCTCCGCACGTGCGGCCTCTGCAAACGCCGCCTCGTTGCCGGCCGCGACATCTACATGTACAGAGGAGACACTGCGTTTTGTAGTTCGGAGTGCAGAGAGAAGCAAATAAAACAAGACGAGAGAAGAGAGGTGTACGGAGCGGCAGGGTCGAAGAAGAAAGATGAGCGGCATGCGCCGTTGTCGACGGCGGCCGGGAGGGGGTCGAGGAAGGGCCAAGACGGTGGCGGCCGCTTATGA ATGCTGCTGGGGAAGCGTCCTCGCCCTCCGATCAAGAGAACCGCCAGTATGACCGGAATCACGCCGGATCTACCCGACGTCGAACCAGAAGAGCCGTCCGATCAAAATCACGACCTAATTACTGATCCCCGCGCCACGGCGGCTGCACAAATACGCCACCTCGCCATTCCGGCCCAAACTACCATCGCCAATCCAAGAAATCCGTCGCCACGTGATCTCGTGCAGCCACCTCCCGATCACTTCCTCCGCACGTGCGGCCTCTGCAAACGCCGCCTCGTTGCCGGCCGCGACATCTACATGTACAGAGGAGACACTGCGTTTTGTAGTTCGGAGTGCAGAGAGAAGCAAATAAAACAAGACGAGAGAAGAGAGGTGTACGGAGCGGCAGGGTCGAAGAAGAAAGATGAGCGGCATGCGCCGTTGTCGACGGCGGCCGGGAGGGGGTCGAGGAAGGGCCAAGACGGTGGCGGCCGCTTATGA MLLGKRPRPPIKRTASMTGITPDLPDVEPEEPSDQNHDLITDPRATAAAQIRHLAIPAQTTIANPRNPSPRDLVQPPPDHFLRTCGLCKRRLVAGRDIYMYRGDTAFCSSECREKQIKQDERREVYGAAGSKKKDERHAPLSTAAGRGSRKGQDGGGRL Homology
BLAST of Moc01g27630.1 vs. NCBI nr
Match: XP_022132991.1 (uncharacterized protein LOC111005696 [Momordica charantia]) HSP 1 Score: 319.7 bits (818), Expect = 1.4e-83 Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0
BLAST of Moc01g27630.1 vs. NCBI nr
Match: XP_038880871.1 (FCS-Like Zinc finger 5 [Benincasa hispida]) HSP 1 Score: 175.3 bits (443), Expect = 4.3e-40 Identity = 107/166 (64.46%), Postives = 114/166 (68.67%), Query Frame = 0
BLAST of Moc01g27630.1 vs. NCBI nr
Match: XP_008440627.1 (PREDICTED: uncharacterized protein LOC103484988 [Cucumis melo] >KAA0036285.1 protein MARD1-like [Cucumis melo var. makuwa] >TYK12679.1 protein MARD1-like [Cucumis melo var. makuwa]) HSP 1 Score: 160.6 bits (405), Expect = 1.1e-35 Identity = 104/170 (61.18%), Postives = 113/170 (66.47%), Query Frame = 0
BLAST of Moc01g27630.1 vs. NCBI nr
Match: XP_004143480.1 (FCS-Like Zinc finger 5 [Cucumis sativus] >KGN48767.1 hypothetical protein Csa_003848 [Cucumis sativus]) HSP 1 Score: 147.5 bits (371), Expect = 9.7e-32 Identity = 96/164 (58.54%), Postives = 110/164 (67.07%), Query Frame = 0
BLAST of Moc01g27630.1 vs. NCBI nr
Match: TXG60638.1 (hypothetical protein EZV62_015211 [Acer yangbiense]) HSP 1 Score: 144.1 bits (362), Expect = 1.1e-30 Identity = 80/148 (54.05%), Postives = 96/148 (64.86%), Query Frame = 0
BLAST of Moc01g27630.1 vs. ExPASy Swiss-Prot
Match: Q9SGZ8 (FCS-Like Zinc finger 6 OS=Arabidopsis thaliana OX=3702 GN=FLZ6 PE=1 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 2.1e-21 Identity = 69/156 (44.23%), Postives = 85/156 (54.49%), Query Frame = 0
BLAST of Moc01g27630.1 vs. ExPASy Swiss-Prot
Match: Q8VY80 (FCS-Like Zinc finger 5 OS=Arabidopsis thaliana OX=3702 GN=FLZ5 PE=1 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 6.8e-20 Identity = 66/146 (45.21%), Postives = 78/146 (53.42%), Query Frame = 0
BLAST of Moc01g27630.1 vs. ExPASy Swiss-Prot
Match: Q9LV75 (Protein INCREASED RESISTANCE TO MYZUS PERSICAE 1 OS=Arabidopsis thaliana OX=3702 GN=IRM1 PE=1 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 2.3e-15 Identity = 59/134 (44.03%), Postives = 70/134 (52.24%), Query Frame = 0
BLAST of Moc01g27630.1 vs. ExPASy Swiss-Prot
Match: F4JW68 (FCS-Like Zinc finger 7 OS=Arabidopsis thaliana OX=3702 GN=FLZ7 PE=1 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 5.0e-15 Identity = 52/121 (42.98%), Postives = 65/121 (53.72%), Query Frame = 0
BLAST of Moc01g27630.1 vs. ExPASy Swiss-Prot
Match: Q8VZM9 (FCS-Like Zinc finger 2 OS=Arabidopsis thaliana OX=3702 GN=FLZ2 PE=1 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.6e-11 Identity = 30/45 (66.67%), Postives = 37/45 (82.22%), Query Frame = 0
BLAST of Moc01g27630.1 vs. ExPASy TrEMBL
Match: A0A6J1BTS9 (uncharacterized protein LOC111005696 OS=Momordica charantia OX=3673 GN=LOC111005696 PE=3 SV=1) HSP 1 Score: 319.7 bits (818), Expect = 6.9e-84 Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0
BLAST of Moc01g27630.1 vs. ExPASy TrEMBL
Match: A0A5A7T493 (Protein MARD1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002670 PE=3 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 5.4e-36 Identity = 104/170 (61.18%), Postives = 113/170 (66.47%), Query Frame = 0
BLAST of Moc01g27630.1 vs. ExPASy TrEMBL
Match: A0A1S3B1J1 (uncharacterized protein LOC103484988 OS=Cucumis melo OX=3656 GN=LOC103484988 PE=3 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 5.4e-36 Identity = 104/170 (61.18%), Postives = 113/170 (66.47%), Query Frame = 0
BLAST of Moc01g27630.1 vs. ExPASy TrEMBL
Match: A0A0A0KK56 (FLZ-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G500590 PE=3 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 4.7e-32 Identity = 96/164 (58.54%), Postives = 110/164 (67.07%), Query Frame = 0
BLAST of Moc01g27630.1 vs. ExPASy TrEMBL
Match: A0A5C7HUW9 (FLZ-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_015211 PE=3 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 5.2e-31 Identity = 80/148 (54.05%), Postives = 96/148 (64.86%), Query Frame = 0
BLAST of Moc01g27630.1 vs. TAIR 10
Match: AT1G78020.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 103.6 bits (257), Expect = 1.5e-22 Identity = 69/156 (44.23%), Postives = 85/156 (54.49%), Query Frame = 0
BLAST of Moc01g27630.1 vs. TAIR 10
Match: AT1G22160.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 98.6 bits (244), Expect = 4.8e-21 Identity = 66/146 (45.21%), Postives = 78/146 (53.42%), Query Frame = 0
BLAST of Moc01g27630.1 vs. TAIR 10
Match: AT5G65040.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 83.6 bits (205), Expect = 1.6e-16 Identity = 59/134 (44.03%), Postives = 70/134 (52.24%), Query Frame = 0
BLAST of Moc01g27630.1 vs. TAIR 10
Match: AT4G39795.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 82.4 bits (202), Expect = 3.6e-16 Identity = 52/121 (42.98%), Postives = 65/121 (53.72%), Query Frame = 0
BLAST of Moc01g27630.1 vs. TAIR 10
Match: AT4G17670.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 70.1 bits (170), Expect = 1.8e-12 Identity = 30/45 (66.67%), Postives = 37/45 (82.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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