MS028754.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS028754.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Location	scaffold155: 509896 .. 510398 (-)
Sequence length	387
RNA-Seq Expression	MS028754.1
Synteny	MS028754.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAGAACGTGGAGTGGTCCACGACCTGTCGTATTTGTCAATGCGAGGCCCCTTGAACCCTATTTGCAGTTCCACGGCCATGATGCTGGTCGTGAACGGCTCTTAAGAGGTTTTTGATGGTTCGTACTGCATCGTGGGTCCAGCTCCTCCTGCTTTGATCTCGGTTTCTACTCGGTTGAAGATTTCTTCCTTCACTTGGTCTAGCTCCTCTCGACCGATCCTAGCTTGGGATCCGTTCGGTTAGCTCGACGTCTTAGTGCTAGTTTGAGAGTCCACATTGGAGCTGGTCACTCCGCGCTTGAAGCGACCTTTGTTGAGCTTATTCGAAGGTCTTTCGACCCTTCAGGGAGCCCAAGAGACGCCAGAGGGTCCTCATTTTGGAGCCTCCCATGGGTCAGGGCCTGGGGCTCCTCTCCAATTGCTCCACCTACCCTCGACCGCGCTCACTTTGGGGAGGGGGAGGGTTCCACGGGTTCGGTCACTCAGGACCACTTCGATTAG

mRNA sequence

ATGGTAGAACGTGGAGTGGTCCACGACCTGTCGTATTTGTCAATGCGAGGCCCCTTGAACCCTATTTGCAGTTCCACGGCCATGATGCTGCTCCTCTCGACCGATCCTAGCTTGGGATCCGTTCGGTTAGCTCGACGTCTTAGTGCTAGTTTGAGAGTCCACATTGGAGCTGGTCACTCCGCGCTTGAAGCGACCTTTGTTGAGCTTATTCGAAGGTCTTTCGACCCTTCAGGGAGCCCAAGAGACGCCAGAGGGTCCTCATTTTGGAGCCTCCCATGGGTCAGGGCCTGGGGCTCCTCTCCAATTGCTCCACCTACCCTCGACCGCGCTCACTTTGGGGAGGGGGAGGGTTCCACGGGTTCGGTCACTCAGGACCACTTCGATTAG

Coding sequence (CDS)

ATGGTAGAACGTGGAGTGGTCCACGACCTGTCGTATTTGTCAATGCGAGGCCCCTTGAACCCTATTTGCAGTTCCACGGCCATGATGCTGCTCCTCTCGACCGATCCTAGCTTGGGATCCGTTCGGTTAGCTCGACGTCTTAGTGCTAGTTTGAGAGTCCACATTGGAGCTGGTCACTCCGCGCTTGAAGCGACCTTTGTTGAGCTTATTCGAAGGTCTTTCGACCCTTCAGGGAGCCCAAGAGACGCCAGAGGGTCCTCATTTTGGAGCCTCCCATGGGTCAGGGCCTGGGGCTCCTCTCCAATTGCTCCACCTACCCTCGACCGCGCTCACTTTGGGGAGGGGGAGGGTTCCACGGGTTCGGTCACTCAGGACCACTTCGATTAG

Protein sequence

MVERGVVHDLSYLSMRGPLNPICSSTAMMLLLSTDPSLGSVRLARRLSASLRVHIGAGHSALEATFVELIRRSFDPSGSPRDARGSSFWSLPWVRAWGSSPIAPPTLDRAHFGEGEGSTGSVTQDHFD

Homology

The following BLAST results are available for this feature:

BLAST of MS028754.1 vs.


Match Name	E-value	Identity	Description

BLAST of MS028754.1 vs.


Match Name	E-value	Identity	Description

BLAST of MS028754.1 vs.


Match Name	E-value	Identity	Description

BLAST of MS028754.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..128

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS028754	MS028754	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS028754.1-cds	MS028754.1-cds-scaffold155:509896..510192	CDS
MS028754.1-cds	MS028754.1-cds-scaffold155:510309..510398	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS028754.1	MS028754.1-protein	polypeptide