MS027973.1 (mRNA) Bitter gourd (TR) v1

Overview
NameMS027973.1
TypemRNA
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Locationscaffold487: 25624 .. 32239 (-)
Sequence length453
RNA-Seq ExpressionMS027973.1
SyntenyMS027973.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGTTTCAACTTCTTCCCCTTCCTCCTCTCTTCATCTTTCTCGTGCTTTTCAACTACTTCCCCTTCTTCCTCTCTTCATCTTTCTCGTCCTTGCCGCTTGAAGCTTACGTTCGTGCGCTTCTTCCTCTTCGTTTCCCCCTTTTTCTCTTATTGTGCATGCTATTGAATGCCTTCTTCACGGATTGTTTAACGCCTTCGTCTGCGCCTCGCCCGTGAAATCAAGGTTAGGATTTCACTAAACTTACACTTAATCATTATGATGTTCTTGTTTAATTTCGTTGTGGGATTCTTGTTAGGGTTTAAGTTTGAACATTTATGTGGGTTTCAGGCGATTTAGGGCGGATTGATTAGGTTTTTGAAATTATTTAAGGTGAATTGATTTGTTTTTGACAAGTTTACGGGCTAATTCGGGTTTCTGGGTTTTAGTTCTCGTGGAGATTTCTCGGGGTACCTATGGCGTGATTTAACTACATCGAAGCATCTCGTTCGAGGTAGCCCGGGAAATTCAGATGTGGTGTACTGTTTCTGGTAAATTTCTCGGGGTATTCTCGGGCAAAGGTAACCCGAGAAATTTACCAGAAGCAATATTTATGTCGCATGCTTTCTCGTTTTATCTCGCGCGCTAAGTTTTATATGTTATTTCTCGAGGGTATCTCGCCCTGGATTGGCACAAGAAATTGAATATTCATCTATTGATTTTTTTCGACACGAGAAATTGTAGTTAACCCAATGTCGAGTGAGATGCCCCCGAGAATTAAGACAGAATATTGCTTGACCACTGGCTTCTTTTTGTTTTTTTGTTTTTGTTTTTTATTTCTTGCTTATGTTTGTATGGCTATCGTATTCAATTATGTTTTTACTCGTATTCAGGTTGGAATTATGGAAATGAGACCGAAAATTGACCCTGCAATCTTTGCCTCTGCAAACGTGACCTGTCTATCGCACCCAGCGAAGACAGGCACTTATATTAAGGAAAAACTCACCCCTAGACAGCTAGCCATGTTTAGGAAAACTATTTTCGGTCATCTGCTGGACGTGGAGCTTGTTTTTAACGGACCGTTGATACACAATATTTTACTTAGGGAGGTTGAGGATAGTACACCGAACACGATTAGTTTCAACCTTTTTGGGAGGAATGTGTCGTTTGGATGGAGGGAGTTTGACCTTATTAGTGGCCTACACTATGACAGGAACCCAGTTAGGAAAGTTACACATCCTCATAAACTTAGGGACCTGTACTTTAACGATAGGACGGACATTGTCTTGGGTGAGTTAGAACCTATACATAGCCGCCCAGTTTGAGGATGACTTCGATGCGGTCAAGGTATCGATTGTTTACCTGGTATAATTGATATTGCTGGGGAGAGAGAGAACGGTGAAGTTTGACCAAACACTGTTTGGAGTAGTGGATGATTGGGAGGTTTGTTGCAACCATGAGTAGGGCATCTCTGTCGTTCTAGAAGACGATAAGTAGTCTTCATCATGGCCCGGCCAAGATGCAAAAGACGGAGGGCTGAGGAAATCATATAGCTTGTACGGTTTCCCATGGGTGTTCCAGGTATGGACATAAATATATTTTTTTTGATATTCTGGGTCGTTGTTATCAATTATGGTTTATAATGCGAATTGCTTATTCGTACAGGTGTGGGCGTACGATGTGATATCTTCCCTATCTGGTCAGGTTGCAAATAAAGTTCTCGAGGATGCAGTGCCACGTATTCTTCGTTGGAGGTGCGACCATTCAATTGCATGGCATGTTCTCGACTGGGAGATATTTCGATCTACAAGTGTAAGTTTGATTTGAATGTTTGTCGCGTCACATTTTTATTTCTCATATTTATCCCGACTCTACCTTACTATTGACTTAGGGAAGAACGCAAAGATTAGAGGCAACTGATGCAGAGACAAACTTCATGAGGTGAACCTTCGAACCACCTGAACTAGAGGATGATGACATCATGGATGTTGAGGCTGGCCCATCGACTGTACGGAAGGGCGCACAGGGTCCGAATGTGGGCCGAGGTGATGATGCTGGACCATCGGCTGTATGTGAGGGACCATTGGATGGTGTGGACGTTGAGATGGTTGGGAAAGACCCTGATTTGGACAATGAGGAGTCCAAGGGTAAGAAAAAAGTTCGCAGTCCTATTGTGCGCCTGAAGAAGGTTGAGAAGCACTTGAGGACGATGGATCATCGTATGGATGAGCGTATGGGTGGCACAGAAGCTGATTTGAAAGCGATTAGAAAGTTTCTTCGACGAATTGCTAAGGTACACAAGTTATGTTTGTTAATTATCATTTTTATTTGTTTTGTTTTGTTTCGTTTTCTTTTTTGTTTGTTAATTTGTCACTAAATATGTAAAGTTTACCTGTTGACGCGAACGATATGAGGAAGCGAAAAGGTGCCGAGCCGAGGGATGGCGCCGGGTTGGAGGATGGCGCCGGGTCGGGGGATTGCAATCGACCGGGGGATGTAGCCGGGCCAAAAGATGGTGCCAATGCGGTAGATGGTGTCGCGCCGACTGATGGTGCAGATGGTACCAATCGTGGAGTGGGTCGCGAGTTGGGATGCAATACCCCAGCGGGAAATTTTGCCGGGATGAGAGCTGTTACCGAGCTGGTAGATGTTGTGAAGGTAGATGTTGGCGACATCGGGGATGGGATGGACGTCGATCCTGTGAAGGTACGTTTGATATACTTCGCGATGGGATCATTAAACGAAGTATCGTTGGATGCTCATAATTTGGTAATGCAGGAACATGGTCACGAGGTCGTTGTGCTTGTCAACGAAGTGGTTCATGGTGATCGCGAACGGTCCATCCTCGAACCCGACATAGTAGAACTTCAGACGCCTAAACGATCAGTACGTATGGGTTACGTCATTATACGCATTCAGCAACATTAGTGATAACTGAGGTTCATGTGTCACATTTTTTTTGCAGCAACATGCACGAGGCTTGTCGTTAAACGAAGCTGTCAAAGAGAACATTCAAGAAGGGGTGGATGCAACACCGGTAGGTTGTATTATGATTGGCTCGCAGCAAACCAATTCATCCACAGACAAGGTATGTAGCTGGTTTTCACCGTCATCTAATGAAGCAAATATTTATTCTTCTAACAATATCGAGGAACATTGTGCGGACGATTTCTCCGACTCCGACGTGGAAGAAGGGAAAGATGTTAAATCACAAACGGCTGCGGATATGTCTGGTACGTCACACGGGGACGCAGACGAGGTTCGTGTGCTATCGCAGCCAATAGATCCGCCAAAGCCCCGACGAGGATCTCGCAAGAGAAAGGTATCGTGGAAGCTCCGTGGATCATTCATAGTAATGGAGGACGGTAAGAAGAAGAAGGTGCTGAGGTATGATCCACTTGTACAACTACCCCCTGAGGAGGTCAACAAGTTTCGTGCATGGATGAATAACCCTACCACAAAGCATACAACTCGAAAATCGTGCTACGGTAATAAGCGCAGGATGTGGTTTCGTGACCTTTTAACCACAGACAAGTGGTTGACCAGCGAGGTACGGGATTGATTGGTTATGTTCATTCTCATATCTCTTTAATTTTTCGTACGCATGTCTATAACAATATCGGTGCATACAGGTAGTAGATTCATTGGTAATGTTCACGTGCAACAAGCTGGAGCAGCATCCGGACTTGTGTTCTCGGAGGTTCACGACCAGTGACATAGTGCTTGCGGTATGATCTATTGTCATGTAGTTTTATTGGCTCTAATAAACTTTTTTATGTGTTGTATTGTCAAGTGCAGAACTTCTTCCGACGGACGGATGGTAAATATCAGCGGTTAATAGCTTCAAACGCCGTTCCAACAACAGTGCAGCAGAATATGATTGGGAGGCCAAGGAGAGAACGATCCTCAGCTACGTCGACGGGACTCACACGGACTATGTGACACGGTGGCTCGTAAAACCACCGTTGTAGAAGAGCCCTACAATGTTCTAACAATGCGGTGACCGGCAACACCCGTTCATGCACAAGTACGGCATTCATAGACTCCGCAATGTTAGTCGTCATTTGGTTATACCTCAATCCGGGTTGATATGCACGTGCCCATTTGTCGAACCCGATGTCCTCTAGATACTTCTGCACTTCTGGGAATCCTGCGAGTTGGTTCCAGTAATACTTGAACGTAGACTTCTTGAATGCCTTAGCTGCTTGAATGTACAACCTCTCCACATCCTCAGTCCTACACTTGAACTTATCGTTCAAATTCATCTTTACATGATGCATACATGTAACGTGTTTCGCGTTGAGGAAGACAGCAGATACAGAATGATTAATGGTTTGGTGCCGGTCGGACACGAAAACCAATCCACTAATGTCTCCAATACAAATCTTCACATGCTCCAAAAACCAAGTCCATGAGCTGTCTGTTTCCTTGTCCACAATTCCAAATGCTAGTGGATATATTTGATTATTCTCATCGACAGAGGAGGCTATAAGTATCACACCTTTATCCTTTCCCTTCAGATGTGCACCGTCAATGACAAGCACAGATCGAATGCAACTTCTAAAGCCTCTTATTGAGCAGCCTAGAGCCATGAATGCATACTGAAAGTATTTATCATCTTCTAGCTTCATGGAAAAAATTGTGCCCGGGTTCACCGATTTCAATGCCTCGCCATATTTACGCAGGAGCGTATAGGACTTCTTAGGCGATCCCATTAGTATATCCAACGCTCTTTCTCTTGCACGCCAAGCCTTTTCATATCGGATGTTTATGCCATAATTTTTCCGCATGTCATTAACAATATCCTTTGGACGATAACGACGACTTACATCCTCGAGGTTGGATTTTATGAGCTGCGACATGACTTCGAGCTTGTCGGTGATCATGTTTCATCACCTCACGTATGCAACTATGCAACTCATGAAACGTAGAGATAAGGAAAGTATCTGAACCTTTAATCTTCCTTGCACGCAGGTTCCATTTGCATCCATCCTCCGAGCATTCGACAGTATACAAGCTCTTATTAGATTTCTTCAAGCGATATTCAAAATTCAATCTCATCGCAAACACAGATAGTTTGAACTGTAATTCTTCTTTCGATCGAAAGGTACTCCCTACCGCAATGTCCTCAGTTGACAGACCAACTTCATTGTCCTCACCTATCCGAGTGAGTACCCTTGAGCAAGAAGCTTGACCAGTTGCACACGGTGCATTCGTACTAACCGTGTGCACTTCGGTCAAGGGGTCTAATGATGGAGCGGCTACATCCTCTGGGTCTACTTCCTGCTCGTTCTCAACATCAGCATCGCTCTCGAACTCATTATCGTGGTTCTCATGATCTCGATCAAACTCAGTATCGTGGTTCTCATCATCCCCACCTTCATACTCCACGTGATTGTCATCATTGTCATCCCATTGACTGCAATAGTTTGTTTCATCATCATCTAGGTTAAATGATGGACCAGCATCCGGAAGCGTGGAATTCAAAGGAACTGATGGCACATAATAGGGAATGGTGTGCTCTACCTGGTCAGGAATTGAAGGGCATGCTTCAGTCCTTGGAACGATACGATTCCGTGAAGTGCTTACACTACCGTGTCTTTCCTTCGGTATGACAGATACATACAATGGGACTTCAGATGGAGGTGGTGGCTTTCTTAAAAAAAATCTGAGGCTATGATCATCGAATATATAATACTGTGGAACCTGATACTGGGGCTTGAATAGGTATACACAACGTATGAAGATGTTGAACTGGTCCCGATCAATTCTAGTAAGCATGAACATGGCACTTATGAGCTCATCGTACGTTATACTATCGTCCACATCTAAACCTCCCATAATCCCACCTTCATATATAGATTGAGACTCATTCCACATACCACCATAGCTAATAAAGAGACGAGGCATCCTGCATTACGAACGAACAAGTTAATTCAAGGTGAAATTACGAGAATTCACCGGCGAAAACATGTAAATTCTCGAGCGTGATGCTTACACATCTCGGACGTGAATGCTATTATTTTCGCCCGAGAATGGTTCAAAAATGGCTCAGAAATAGCTAGAACAACTAGAACAAACAAATTGTTTCACCCATATCCACGCTACGTTTCAATAGAAGATGAAAGCTAAAAAAATAAAATTATACAAAAGCTAGAGATGCAAATGTGTGAGTTCATAGATGAAGACAAAACATGTTCTTCAAAATAAATAACACCTACCTCGTTCATGTAGAAAAATATCACTTTCAGATGGAAAAGTCTGAGGTAATTTGCAGATACGTAATTATTTTTGTTGTCTGAGAGCTGAATACAAGATGCACTGATGAAAAGTAAAGTCATTCGTGGGAATATTTTCAGTTAGGTGTTTCCTTTATTGAAAAATTTCAATTCATGGACGAGACAGAGGCATTTCACGGACATGAAATTAATGTAGGTCAACCACATATCTTCATATCTCGGGCGGGATAGCTGTAGTTCACGGCCGGGAAATTAATGTAGTTCAGTCCATTTCTCGCAAAAGTCTCGCCCATAATGTCATTATCTTGTTATTTTTCTCAGGTTTCGCTCGAGAAAGTAACGATCTCGCGAATTCAATTTGTTTGCGAGGGGTAGTTGGGTACATTTACTACCACTGA

mRNA sequence

ATGCGTTTCAACTTCTTCCCCTTCCTCCTCTCTTCATCTTTCTCGTGCTTTTCAACTACTTCCCCTTCTTCCTCTCTTCATCTTTCTCATGGTGTCGCGCCGACTGATGGTGCAGATGGTACCAATCGTGGAGTGGGTCGCGAGTTGGGATGCAATACCCCAGCGGGAAATTTTGCCGGGATGAGAGCTGTTACCGAGCTGGTAGATGTTGTGAAGGTAGATGTTGGCGACATCGGGGATGGGATGGACGTCGATCCTGTGAAGGAACATGGTCACGAGGTCGTTGTGCTTGTCAACGAAGTGGTTCATGGTGATCGCGAACGGTCCATCCTCGAACCCGACATAGTAGAACTTCAGACGCCTAAACGATCAGTACGTTTCGCTCGAGAAAGTAACGATCTCGCGAATTCAATTTGTTTGCGAGGGGTAGTTGGGTACATTTACTACCACTGA

Coding sequence (CDS)

ATGCGTTTCAACTTCTTCCCCTTCCTCCTCTCTTCATCTTTCTCGTGCTTTTCAACTACTTCCCCTTCTTCCTCTCTTCATCTTTCTCATGGTGTCGCGCCGACTGATGGTGCAGATGGTACCAATCGTGGAGTGGGTCGCGAGTTGGGATGCAATACCCCAGCGGGAAATTTTGCCGGGATGAGAGCTGTTACCGAGCTGGTAGATGTTGTGAAGGTAGATGTTGGCGACATCGGGGATGGGATGGACGTCGATCCTGTGAAGGAACATGGTCACGAGGTCGTTGTGCTTGTCAACGAAGTGGTTCATGGTGATCGCGAACGGTCCATCCTCGAACCCGACATAGTAGAACTTCAGACGCCTAAACGATCAGTACGTTTCGCTCGAGAAAGTAACGATCTCGCGAATTCAATTTGTTTGCGAGGGGTAGTTGGGTACATTTACTACCACTGA

Protein sequence

MRFNFFPFLLSSSFSCFSTTSPSSSLHLSHGVAPTDGADGTNRGVGRELGCNTPAGNFAGMRAVTELVDVVKVDVGDIGDGMDVDPVKEHGHEVVVLVNEVVHGDRERSILEPDIVELQTPKRSVRFARESNDLANSICLRGVVGYIYYH
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..16
score: 5.0

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MS027973MS027973gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MS027973.1-cdsMS027973.1-cds-scaffold487:25624..25700CDS
MS027973.1-cdsMS027973.1-cds-scaffold487:29371..29482CDS
MS027973.1-cdsMS027973.1-cds-scaffold487:29555..29730CDS
MS027973.1-cdsMS027973.1-cds-scaffold487:32152..32239CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MS027973.1MS027973.1-proteinpolypeptide