MS027632.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS027632.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Location	scaffold20: 2473228 .. 2473518 (-)
Sequence length	291
RNA-Seq Expression	MS027632.1
Synteny	MS027632.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAACTTCCGATCACAGGCCTTTGGCTTTTGGTGGTGGCGATCATGGCGCTTCTCACCGGAGCTCATGTGGCGGAGGCGGTGACTTGCAGTCCTTTGCAGCTGAGCTCGTGTGCCGGGGCAATTTCATCGTCGACGCGGCCATCGGCCAGTTGTTGCAGTAAGCTGAGAGAGCAAAGGCCATGCCTTTGTGGGTACTTGAAGAATCCAAACTTGAGGCCTTACGTGCAATCTCCCGGCGCCAAAACTGTTGCTTCTGCCTGTGGCGTTGCCTTCCCCAGCTGCTAG

mRNA sequence

ATGAAGAAACTTCCGATCACAGGCCTTTGGCTTTTGGTGGTGGCGATCATGGCGCTTCTCACCGGAGCTCATGTGGCGGAGGCGGTGACTTGCAGTCCTTTGCAGCTGAGCTCGTGTGCCGGGGCAATTTCATCGTCGACGCGGCCATCGGCCAGTTGTTGCAGTAAGCTGAGAGAGCAAAGGCCATGCCTTTGTGGGTACTTGAAGAATCCAAACTTGAGGCCTTACGTGCAATCTCCCGGCGCCAAAACTGTTGCTTCTGCCTGTGGCGTTGCCTTCCCCAGCTGCTAG

Coding sequence (CDS)

ATGAAGAAACTTCCGATCACAGGCCTTTGGCTTTTGGTGGTGGCGATCATGGCGCTTCTCACCGGAGCTCATGTGGCGGAGGCGGTGACTTGCAGTCCTTTGCAGCTGAGCTCGTGTGCCGGGGCAATTTCATCGTCGACGCGGCCATCGGCCAGTTGTTGCAGTAAGCTGAGAGAGCAAAGGCCATGCCTTTGTGGGTACTTGAAGAATCCAAACTTGAGGCCTTACGTGCAATCTCCCGGCGCCAAAACTGTTGCTTCTGCCTGTGGCGTTGCCTTCCCCAGCTGCTAG

Protein sequence

MKKLPITGLWLLVVAIMALLTGAHVAEAVTCSPLQLSSCAGAISSSTRPSASCCSKLREQRPCLCGYLKNPNLRPYVQSPGAKTVASACGVAFPSC

Homology

[Close]

BLAST of MS027632.1 vs. NCBI nr
Match: XP_022143278.1 (non-specific lipid-transfer protein 2-like [Momordica charantia])

HSP 1 Score: 188.0 bits (476), Expect = 3.9e-44
Identity = 95/96 (98.96%), Postives = 95/96 (98.96%), Query Frame = 0


Query: 1  MKKLPITGLWLLVVAIMALLTGAHVAEAVTCSPLQLSSCAGAISSSTRPSASCCSKLREQ 60
          MK LPITGLWLLVVAIMALLTGAHVAEAVTCSPLQLSSCAGAISSSTRPSASCCSKLREQ
Sbjct: 1  MKTLPITGLWLLVVAIMALLTGAHVAEAVTCSPLQLSSCAGAISSSTRPSASCCSKLREQ 60

Query: 61 RPCLCGYLKNPNLRPYVQSPGAKTVASACGVAFPSC 97
          RPCLCGYLKNPNLRPYVQSPGAKTVASACGVAFPSC
Sbjct: 61 RPCLCGYLKNPNLRPYVQSPGAKTVASACGVAFPSC 96

[Close]

BLAST of MS027632.1 vs. NCBI nr
Match: XP_022148226.1 (non-specific lipid-transfer protein 2-like [Momordica charantia])

HSP 1 Score: 144.1 bits (362), Expect = 6.5e-31
Identity = 75/98 (76.53%), Postives = 81/98 (82.65%), Query Frame = 0


Query: 1  MKKLPITG--LWLLVVAIMALLTGAHVAEAVTCSPLQLSSCAGAISSSTRPSASCCSKLR 60
          MKKL ITG  LWLLVVAI ALL GA V EAVTCSP +LS C  AI S   PS++CCSKLR
Sbjct: 1  MKKLSITGLRLWLLVVAIAALLIGARVTEAVTCSPTELSPCVTAILSGMPPSSACCSKLR 60

Query: 61 EQRPCLCGYLKNPNLRPYVQSPGAKTVASACGVAFPSC 97
          EQ+PCLCGYL+NPNL+PYVQSP AK VASACGVAFPSC
Sbjct: 61 EQKPCLCGYLRNPNLKPYVQSPNAKKVASACGVAFPSC 98

[Close]

BLAST of MS027632.1 vs. NCBI nr
Match: KAG6581748.1 (hypothetical protein SDJN03_21750, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 139.4 bits (350), Expect = 1.6e-29
Identity = 66/96 (68.75%), Postives = 83/96 (86.46%), Query Frame = 0


Query: 1  MKKLPITGLWLLVVAIMALLTGAHVAEAVTCSPLQLSSCAGAISSSTRPSASCCSKLREQ 60
          MKK PIT  +L +  ++ALL+GA VAEAV CSP++LSSCAGAI+SS+ PS++CC+KLREQ
Sbjct: 1  MKKFPITIAFLFMAVMVALLSGARVAEAVNCSPMELSSCAGAITSSSTPSSTCCNKLREQ 60

Query: 61 RPCLCGYLKNPNLRPYVQSPGAKTVASACGVAFPSC 97
          +PCLCGY++NP LRPYVQSPGA+ VA+ CGV FPSC
Sbjct: 61 KPCLCGYIRNPALRPYVQSPGARNVAAKCGVPFPSC 96

[Close]

BLAST of MS027632.1 vs. NCBI nr
Match: XP_022955426.1 (non-specific lipid-transfer protein 2-like [Cucurbita moschata])

HSP 1 Score: 139.0 bits (349), Expect = 2.1e-29
Identity = 66/96 (68.75%), Postives = 83/96 (86.46%), Query Frame = 0


Query: 1  MKKLPITGLWLLVVAIMALLTGAHVAEAVTCSPLQLSSCAGAISSSTRPSASCCSKLREQ 60
          MKK PIT  +L +  ++ALL+GA VAEAV CSP++LSSCAGAI+SS+ PS++CC+KLREQ
Sbjct: 1  MKKFPITIAFLFMAVMVALLSGARVAEAVNCSPMELSSCAGAITSSSTPSSTCCNKLREQ 60

Query: 61 RPCLCGYLKNPNLRPYVQSPGAKTVASACGVAFPSC 97
          +PCLCGY++NP LRPYVQSPGA+ VA+ CGV FPSC
Sbjct: 61 KPCLCGYIRNPALRPYVQSPGARKVAAKCGVPFPSC 96

[Close]

BLAST of MS027632.1 vs. NCBI nr
Match: XP_038904866.1 (non-specific lipid-transfer protein 2-like [Benincasa hispida])

HSP 1 Score: 126.3 bits (316), Expect = 1.4e-25
Identity = 63/96 (65.62%), Postives = 75/96 (78.12%), Query Frame = 0


Query: 1  MKKLPITGLWLLVVAIMALLTGAHVAEAVTCSPLQLSSCAGAISSSTRPSASCCSKLREQ 60
          MK L  T L LLVVA+ ALLTGA +AEAVTCS ++LS C GA +S+  PSA+CCSKL+EQ
Sbjct: 1  MKNLSFTSLHLLVVAMAALLTGARLAEAVTCSTMELSPCIGAFTSTAPPSAACCSKLKEQ 60

Query: 61 RPCLCGYLKNPNLRPYVQSPGAKTVASACGVAFPSC 97
          +PC CGY+KNP L  YV+SP AKTV S CGV+FP C
Sbjct: 61 QPCFCGYIKNPKLGAYVKSPRAKTVISTCGVSFPKC 96

[Close]

BLAST of MS027632.1 vs. ExPASy Swiss-Prot
Match: Q43681 (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.7e-21
Identity = 49/94 (52.13%), Postives = 69/94 (73.40%), Query Frame = 0


Query: 3  KLPITGLWLLVVAIMALLTGAHVAEAVTCSPLQLSSCAGAISSSTRPSASCCSKLREQRP 62
          K+ ++ +  +VV  + L+    VAEAVTC+P +LSSC  AI+  ++PS++CCSKL+ Q P
Sbjct: 6  KMKMSVVCAVVVVALFLIDVGPVAEAVTCNPTELSSCVPAITGGSKPSSTCCSKLKVQEP 65

Query: 63 CLCGYLKNPNLRPYVQSPGAKTVASACGVAFPSC 97
          CLC Y+KNP+L+ YV SPGAK V S CGV +P+C
Sbjct: 66 CLCNYIKNPSLKQYVNSPGAKKVLSNCGVTYPNC 99

[Close]

BLAST of MS027632.1 vs. ExPASy Swiss-Prot
Match: P82353 (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 3.5e-19
Identity = 44/68 (64.71%), Postives = 50/68 (73.53%), Query Frame = 0


Query: 29 VTCSPLQLSSCAGAISSSTRPSASCCSKLREQRPCLCGYLKNPNLRPYVQSPGAKTVASA 88
          VTCSP+QLS C G I+S      +CC KLREQRPCLCGYLKNP+LR YV SP A+ +AS 
Sbjct: 1  VTCSPVQLSPCLGPINSGAPSPTTCCQKLREQRPCLCGYLKNPSLRQYVNSPNARKLASN 60

Query: 89 CGVAFPSC 97
          CGV  P C
Sbjct: 61 CGVPVPQC 68

[Close]

BLAST of MS027632.1 vs. ExPASy Swiss-Prot
Match: P86809 (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=278110 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 7.7e-19
Identity = 42/63 (66.67%), Postives = 53/63 (84.13%), Query Frame = 0


Query: 30 TCSPLQLSSCAGAISSSTRPSASCCSKLREQRPCLCGYLKNPNLRPYVQSPGAKTVASAC 89
          TCS +QLS C  AI+ +T PSA+CC+KL+EQ+PCLCGYLK+PNL+ YV SPGA+  AS+C
Sbjct: 2  TCSAVQLSPCLAAITKNTPPSAACCNKLKEQKPCLCGYLKDPNLKNYVNSPGARKTASSC 61

Query: 90 GVA 93
          GVA
Sbjct: 62 GVA 64

[Close]

BLAST of MS027632.1 vs. ExPASy Swiss-Prot
Match: P20145 (Probable non-specific lipid-transfer protein OS=Hordeum vulgare OX=4513 GN=LTP2 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 9.7e-14
Identity = 36/86 (41.86%), Postives = 49/86 (56.98%), Query Frame = 0


Query: 11  LLVVAIMALLTGAHVAEAVTCSPLQLSSCAGAISSSTRPSASCCSKLREQRPCLCGYLKN 70
           +++V ++ L  GA       C P QL+ CA AI   T+PS  CC  LR Q+ CLC Y+K+
Sbjct: 17  VMMVMVVTLAAGADAGAGAACEPAQLAVCASAILGGTKPSGECCGNLRAQQGCLCQYVKD 76

Query: 71  PNLRPYVQSPGAKTVASACGVAFPSC 97
           PN   YV SP A+   + CG+  P C
Sbjct: 77  PNYGHYVSSPHARDTLNLCGIPVPHC 102

[Close]

BLAST of MS027632.1 vs. ExPASy Swiss-Prot
Match: A2XBN5 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=LTP-2 PE=3 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 4.8e-13
Identity = 39/87 (44.83%), Postives = 55/87 (63.22%), Query Frame = 0


Query: 11 LLVVAIMALLTGAHVAEA-VTCSPLQLSSCAGAISSSTRPSASCCSKLREQRPCLCGYLK 70
          +L VA++A   G  V  A  +C+  QL+ CAGAI+   RP+A+CCS LR Q+ C C + K
Sbjct: 9  VLAVAMVAACGGGVVGVAGASCNAGQLTVCAGAIAGGARPTAACCSSLRAQQGCFCQFAK 68

Query: 71 NPNLRPYVQSPGAKTVASACGVAFPSC 97
          +P    YV SP A+   S+CG+A P+C
Sbjct: 69 DPRYGRYVNSPNARKAVSSCGIALPTC 95

[Close]

BLAST of MS027632.1 vs. ExPASy TrEMBL
Match: A0A6J1CQB8 (non-specific lipid-transfer protein 2-like OS=Momordica charantia OX=3673 GN=LOC111013188 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.9e-44
Identity = 95/96 (98.96%), Postives = 95/96 (98.96%), Query Frame = 0


Query: 1  MKKLPITGLWLLVVAIMALLTGAHVAEAVTCSPLQLSSCAGAISSSTRPSASCCSKLREQ 60
          MK LPITGLWLLVVAIMALLTGAHVAEAVTCSPLQLSSCAGAISSSTRPSASCCSKLREQ
Sbjct: 1  MKTLPITGLWLLVVAIMALLTGAHVAEAVTCSPLQLSSCAGAISSSTRPSASCCSKLREQ 60

Query: 61 RPCLCGYLKNPNLRPYVQSPGAKTVASACGVAFPSC 97
          RPCLCGYLKNPNLRPYVQSPGAKTVASACGVAFPSC
Sbjct: 61 RPCLCGYLKNPNLRPYVQSPGAKTVASACGVAFPSC 96

[Close]

BLAST of MS027632.1 vs. ExPASy TrEMBL
Match: A0A6J1D4R3 (non-specific lipid-transfer protein 2-like OS=Momordica charantia OX=3673 GN=LOC111016938 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 3.1e-31
Identity = 75/98 (76.53%), Postives = 81/98 (82.65%), Query Frame = 0


Query: 1  MKKLPITG--LWLLVVAIMALLTGAHVAEAVTCSPLQLSSCAGAISSSTRPSASCCSKLR 60
          MKKL ITG  LWLLVVAI ALL GA V EAVTCSP +LS C  AI S   PS++CCSKLR
Sbjct: 1  MKKLSITGLRLWLLVVAIAALLIGARVTEAVTCSPTELSPCVTAILSGMPPSSACCSKLR 60

Query: 61 EQRPCLCGYLKNPNLRPYVQSPGAKTVASACGVAFPSC 97
          EQ+PCLCGYL+NPNL+PYVQSP AK VASACGVAFPSC
Sbjct: 61 EQKPCLCGYLRNPNLKPYVQSPNAKKVASACGVAFPSC 98

[Close]

BLAST of MS027632.1 vs. ExPASy TrEMBL
Match: A0A6J1GTR0 (non-specific lipid-transfer protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111457455 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.0e-29
Identity = 66/96 (68.75%), Postives = 83/96 (86.46%), Query Frame = 0


Query: 1  MKKLPITGLWLLVVAIMALLTGAHVAEAVTCSPLQLSSCAGAISSSTRPSASCCSKLREQ 60
          MKK PIT  +L +  ++ALL+GA VAEAV CSP++LSSCAGAI+SS+ PS++CC+KLREQ
Sbjct: 1  MKKFPITIAFLFMAVMVALLSGARVAEAVNCSPMELSSCAGAITSSSTPSSTCCNKLREQ 60

Query: 61 RPCLCGYLKNPNLRPYVQSPGAKTVASACGVAFPSC 97
          +PCLCGY++NP LRPYVQSPGA+ VA+ CGV FPSC
Sbjct: 61 KPCLCGYIRNPALRPYVQSPGARKVAAKCGVPFPSC 96

[Close]

BLAST of MS027632.1 vs. ExPASy TrEMBL
Match: A0A2G9G3M3 (AAI domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_27585 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.3e-24
Identity = 57/89 (64.04%), Postives = 70/89 (78.65%), Query Frame = 0


Query: 8  GLWLLVVAIMALLTGAHVAEAVTCSPLQLSSCAGAISSSTRPSASCCSKLREQRPCLCGY 67
          G+W LV A++ LL  A +A AV CSPL+LS C GA++ S  PS +CC+KLREQRPCLCGY
Sbjct: 10 GVWCLVAAVVVLLVEARIAAAVNCSPLELSPCVGAVTGSQPPSGACCNKLREQRPCLCGY 69

Query: 68 LKNPNLRPYVQSPGAKTVASACGVAFPSC 97
          L++PNLR YV SPGA+ VASACGV  P+C
Sbjct: 70 LRDPNLRQYVNSPGARRVASACGVPTPTC 98

[Close]

BLAST of MS027632.1 vs. ExPASy TrEMBL
Match: A0A5A7VAB3 (Non-specific lipid-transfer protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G001020 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.7e-24
Identity = 62/96 (64.58%), Postives = 73/96 (76.04%), Query Frame = 0


Query: 1  MKKLPITGLWLLVVAIMALLTGAHVAEAVTCSPLQLSSCAGAISSSTRPSASCCSKLREQ 60
          MK L  T L LLVVAI+ALLTGA VAEAVTC+ +QLS C GAI+S+  PS +CCSKLREQ
Sbjct: 1  MKNLRFTSLHLLVVAIVALLTGARVAEAVTCNTMQLSPCIGAITSTAPPSTTCCSKLREQ 60

Query: 61 RPCLCGYLKNPNLRPYVQSPGAKTVASACGVAFPSC 97
          +PC CGY+KNP+L  YV+S  AK + S CGV  P C
Sbjct: 61 QPCFCGYMKNPSLGGYVKSARAKAIISTCGVPLPKC 96

[Close]

BLAST of MS027632.1 vs. TAIR 10
Match: AT1G48750.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 105.5 bits (262), Expect = 2.4e-23
Identity = 51/90 (56.67%), Postives = 70/90 (77.78%), Query Frame = 0


Query: 9  LWLLVVAIMA--LLTGAHVAEAVTCSPLQLSSCAGAISSSTRPSASCCSKLREQRPCLCG 68
          +W+ V+A+ A  LL    VAE VTCSP+QL+SCA A++SS+ PS +CC+KLREQ+PCLCG
Sbjct: 5  MWVSVLALAAAILLLTVPVAEGVTCSPMQLASCAAAMTSSSPPSEACCTKLREQQPCLCG 64

Query: 69 YLKNPNLRPYVQSPGAKTVASACGVAFPSC 97
          Y++NP LR YV SP A+ V+++C +  PSC
Sbjct: 65 YMRNPTLRQYVSSPNARKVSNSCKIPSPSC 94

[Close]

BLAST of MS027632.1 vs. TAIR 10
Match: AT3G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 99.8 bits (247), Expect = 1.3e-21
Identity = 50/96 (52.08%), Postives = 69/96 (71.88%), Query Frame = 0


Query: 1  MKKLPITGLWLLVVAIMALLTGAHVAEAVTCSPLQLSSCAGAISSSTRPSASCCSKLREQ 60
          M  +  T + L  +A + L+  A  AEAVTCSP+QLS CA AI+SS+ PSA CC+KL+EQ
Sbjct: 1  MVMIKTTMVSLFALAAVLLMILAPAAEAVTCSPMQLSPCATAITSSSPPSALCCAKLKEQ 60

Query: 61 RPCLCGYLKNPNLRPYVQSPGAKTVASACGVAFPSC 97
          RPCLCGY++NP+LR +V +P A+ V+ +C +  P C
Sbjct: 61 RPCLCGYMRNPSLRRFVSTPNARKVSKSCKLPIPRC 96

[Close]

BLAST of MS027632.1 vs. TAIR 10
Match: AT1G66850.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 77.0 bits (188), Expect = 9.0e-15
Identity = 39/82 (47.56%), Postives = 49/82 (59.76%), Query Frame = 0


Query: 15  AIMALLTGAHVAEAVTCSPLQLSSCAGAISSSTRPSASCCSKLREQRPCLCGYLKNPNLR 74
           AI A  TG      VTC   QL  C  AI+   +PS +CC+KL EQ+ CLCG+ KNP   
Sbjct: 21  AIKAEDTGDTGNVGVTCDARQLQPCLAAITGGGQPSGACCAKLTEQQSCLCGFAKNPAFA 80

Query: 75  PYVQSPGAKTVASACGVAFPSC 97
            Y+ SP A+ V  AC VA+P+C
Sbjct: 81  QYISSPNARKVLLACNVAYPTC 102

[Close]

BLAST of MS027632.1 vs. TAIR 10
Match: AT1G73780.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 73.6 bits (179), Expect = 1.0e-13
Identity = 34/84 (40.48%), Postives = 50/84 (59.52%), Query Frame = 0


Query: 13 VVAIMALLTGAHVAEAVTCSPLQLSSCAGAISSSTRPSASCCSKLREQRPCLCGYLKNPN 72
          ++ I+ +     VA    C+P QLS C   I   + PS  CCSK++EQ+ C+C YLKNPN
Sbjct: 15 ILLILIVAQENRVAAVDPCNPAQLSPCLETIMKGSEPSDLCCSKVKEQQHCICQYLKNPN 74

Query: 73 LRPYVQSPGAKTVASACGVAFPSC 97
           + ++ SP AK +A+ C   +P C
Sbjct: 75 FKSFLNSPNAKIIATDCHCPYPKC 98

[Close]

BLAST of MS027632.1 vs. TAIR 10
Match: AT5G38160.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 73.2 bits (178), Expect = 1.3e-13
Identity = 39/92 (42.39%), Postives = 53/92 (57.61%), Query Frame = 0


Query: 6   ITGLWLLVVAIMA-LLTGAHVAEAVTCSPLQLSSCAGAISSSTRPSASCCSKLREQRPCL 65
           + G  L  V + A ++ G+     VTC   QLSSC  A+S+   PS  CC KL+E   CL
Sbjct: 12  VLGTMLSPVPVKARVVKGSGEEVNVTCDATQLSSCVTAVSTGAPPSTDCCGKLKEHETCL 71

Query: 66  CGYLKNPNLRPYVQSPGAKTVASACGVAFPSC 97
           C Y++NP    YV SP A+   +AC VA+P+C
Sbjct: 72  CTYIQNPLYSSYVTSPNARKTLAACDVAYPTC 103

The following BLAST results are available for this feature:

BLAST of MS027632.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143278.1	3.9e-44	98.96	non-specific lipid-transfer protein 2-like [Momordica charantia]	[more]
XP_022148226.1	6.5e-31	76.53	non-specific lipid-transfer protein 2-like [Momordica charantia]	[more]
KAG6581748.1	1.6e-29	68.75	hypothetical protein SDJN03_21750, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022955426.1	2.1e-29	68.75	non-specific lipid-transfer protein 2-like [Cucurbita moschata]	[more]
XP_038904866.1	1.4e-25	65.63	non-specific lipid-transfer protein 2-like [Benincasa hispida]	[more]

BLAST of MS027632.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q43681	1.7e-21	52.13	Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 ...	[more]
P82353	3.5e-19	64.71	Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1	[more]
P86809	7.7e-19	66.67	Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=27811...	[more]
P20145	9.7e-14	41.86	Probable non-specific lipid-transfer protein OS=Hordeum vulgare OX=4513 GN=LTP2 ...	[more]
A2XBN5	4.8e-13	44.83	Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]

BLAST of MS027632.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CQB8	1.9e-44	98.96	non-specific lipid-transfer protein 2-like OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1D4R3	3.1e-31	76.53	non-specific lipid-transfer protein 2-like OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1GTR0	1.0e-29	68.75	non-specific lipid-transfer protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A2G9G3M3	1.3e-24	64.04	AAI domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_2...	[more]
A0A5A7VAB3	1.7e-24	64.58	Non-specific lipid-transfer protein 2-like OS=Cucumis melo var. makuwa OX=119469...	[more]

BLAST of MS027632.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G48750.1	2.4e-23	56.67	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G18280.1	1.3e-21	52.08	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G66850.1	9.0e-15	47.56	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G73780.1	1.0e-13	40.48	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G38160.1	1.3e-13	42.39	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 31..96 e-value: 9.3E-6 score: 35.1
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 13..92 e-value: 8.0E-9 score: 35.5
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 29..96 e-value: 3.7E-24 score: 86.8
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 30..96
IPR033872	Non-specific lipid-transfer protein type 2	PANTHER	PTHR33214	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 9..96
IPR033872	Non-specific lipid-transfer protein type 2	CDD	cd01959	nsLTP2	coord: 31..96 e-value: 3.64588E-27 score: 92.3766
None	No IPR available	PANTHER	PTHR33214:SF44	LIPID TRANSFER PROTEIN FAMILY PROTEIN-RELATED	coord: 9..96

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS027632	MS027632	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS027632.1-cds	MS027632.1-cds-scaffold20:2473228..2473518	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS027632.1	MS027632.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport