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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGACAGATGGTAGTCGGGTATCGGAGATCTCTCTGTTGAATGTCGATAGTGTTGTTGCGACAGACAAAATAAAAGACAATATTATTATGTATTGTTTGTGGCTTCGTCATCAAGGTGTTTCGAAGAGTTATCAGACACAAAATTGGAGAAGATGCCCACCTGCGATTTCCTTGGATGACTCTTCATCTTCATTGCATCCGGGTTCAGAGAACTTACATGGTCTAGAGGCAAGGATGATGGAGCAGAAGGTGGACGACGGCGGAGGAGTGGCGATGATCAGTTGGAACACTGTTTTGGAATCTATAGAGCTTATCAATTTTAATTTTATTAAAATCTGTGACTCGCATGAGTTGGAGCATTTGCCTAATTCTTTCTTACCTATCATGGTGGATAATAATGCAACCATATAG mRNA sequence ATGACAGATGGTAGTCGGGTATCGGAGATCTCTCTGTTGAATGTCGATAGTGTTGTTGCGACAGACAAAATAAAAGACAATATTATTATGTATTGTTTGTGGCTTCGTCATCAAGGTGTTTCGAAGAGTTATCAGACACAAAATTGGAGAAGATGCCCACCTGCGATTTCCTTGGATGACTCTTCATCTTCATTGCATCCGGGTTCAGAGAACTTACATGGTCTAGAGGCAAGGATGATGGAGCAGAAGGTGGACGACGGCGGAGGAGTGGCGATGATCAGTTGGAACACTGTTTTGGAATCTATAGAGCTTATCAATTTTAATTTTATTAAAATCTGTGACTCGCATGAGTTGGAGCATTTGCCTAATTCTTTCTTACCTATCATGGTGGATAATAATGCAACCATATAG Coding sequence (CDS) ATGACAGATGGTAGTCGGGTATCGGAGATCTCTCTGTTGAATGTCGATAGTGTTGTTGCGACAGACAAAATAAAAGACAATATTATTATGTATTGTTTGTGGCTTCGTCATCAAGGTGTTTCGAAGAGTTATCAGACACAAAATTGGAGAAGATGCCCACCTGCGATTTCCTTGGATGACTCTTCATCTTCATTGCATCCGGGTTCAGAGAACTTACATGGTCTAGAGGCAAGGATGATGGAGCAGAAGGTGGACGACGGCGGAGGAGTGGCGATGATCAGTTGGAACACTGTTTTGGAATCTATAGAGCTTATCAATTTTAATTTTATTAAAATCTGTGACTCGCATGAGTTGGAGCATTTGCCTAATTCTTTCTTACCTATCATGGTGGATAATAATGCAACCATATAG Protein sequence MTDGSRVSEISLLNVDSVVATDKIKDNIIMYCLWLRHQGVSKSYQTQNWRRCPPAISLDDSSSSLHPGSENLHGLEARMMEQKVDDGGGVAMISWNTVLESIELINFNFIKICDSHELEHLPNSFLPIMVDNNATI
Homology
BLAST of MS026944.1 vs. NCBI nr
Match: XP_022159860.1 (uncharacterized protein LOC111026150 [Momordica charantia]) HSP 1 Score: 95.5 bits (236), Expect = 3.7e-16 Identity = 56/135 (41.48%), Postives = 69/135 (51.11%), Query Frame = 0
Query: 1 MTDGSRVSEISLLNVDSVVATDKIKDNIIMYCLWLRHQGVSKSYQTQNWRRCPPAISLDD 60
M D +SEIS L+ +S V DKIK NI+MY W RH V KSY QNW
Sbjct: 1 MADSDWMSEISPLDANSAVVVDKIKANIVMYGPWHRHHDVLKSYHAQNW----------- 60
Query: 61 SSSSLHPGSENLHGLEARMMEQKVDDGGGVAMISWNTVLESIELINFNFIKICDSHELEH 120
RMMEQKV D GG A I NTVL S+E+IN N ++I H+ +
Sbjct: 61 ----------------TRMMEQKVGDDGGAATIKSNTVLGSVEVINLNCLEIPCQHDFGN 108
Query: 121 LPNSFLPIMVDNNAT 136
L N LP+ V++ T
Sbjct: 121 LSNPSLPVTVEDKTT 108
BLAST of MS026944.1 vs. ExPASy TrEMBL
Match: A0A6J1DZZ2 (uncharacterized protein LOC111026150 OS=Momordica charantia OX=3673 GN=LOC111026150 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 1.8e-16 Identity = 56/135 (41.48%), Postives = 69/135 (51.11%), Query Frame = 0
Query: 1 MTDGSRVSEISLLNVDSVVATDKIKDNIIMYCLWLRHQGVSKSYQTQNWRRCPPAISLDD 60
M D +SEIS L+ +S V DKIK NI+MY W RH V KSY QNW
Sbjct: 1 MADSDWMSEISPLDANSAVVVDKIKANIVMYGPWHRHHDVLKSYHAQNW----------- 60
Query: 61 SSSSLHPGSENLHGLEARMMEQKVDDGGGVAMISWNTVLESIELINFNFIKICDSHELEH 120
RMMEQKV D GG A I NTVL S+E+IN N ++I H+ +
Sbjct: 61 ----------------TRMMEQKVGDDGGAATIKSNTVLGSVEVINLNCLEIPCQHDFGN 108
Query: 121 LPNSFLPIMVDNNAT 136
L N LP+ V++ T
Sbjct: 121 LSNPSLPVTVEDKTT 108
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022159860.1 | 3.7e-16 | 41.48 | uncharacterized protein LOC111026150 [Momordica charantia] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1DZZ2 | 1.8e-16 | 41.48 | uncharacterized protein LOC111026150 OS=Momordica charantia OX=3673 GN=LOC111026... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Type |
|---|
| MS026944 | MS026944 | gene |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MS026944.1-cds | MS026944.1-cds-scaffold9_2:615958..616368 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MS026944.1 | MS026944.1-protein | polypeptide |
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