MS025923.1 (mRNA) Bitter gourd (TR) v1

Overview
NameMS025923.1
TypemRNA
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Locationscaffold878: 399298 .. 402014 (+)
Sequence length525
RNA-Seq ExpressionMS025923.1
SyntenyMS025923.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGATCGCTTACCGACCAAGGTGAGAGAAGGCGAGTTATATTGGCCGACAATTACAGCCGGAAGTGGCAAAATAGGCTCCAGTGAGCGTGGAAACTTCCGGCTTGGGTATATAGGCACGCCACTCTGAAGTCTGAAGACTTGATCTCGTGTCCTCTACAGTCTCCCGATGAAATCGTAAACACTGAAGCAAGTAATTTGCTCCGCCAAAACAAAAGTTACACTTTCGATTGAAGCATCGTTTCGTTTCCTATCGACATGTTAGCTTTCGTGATAGAAACACCACCGTTTTACAAATATGTGAGAGAAATATGGAGGGGATGGAATATTTATAATTGTTATGAAATTTGTACCCACAAAAGTGAACTAATAAATAATTGTTCTACATTTTCTTCAAATAAATTATAAGTATTTCAAACTTCAAATTAGTCTCTAACCTATCTATCTCATGTGGTAATTTAAAAAGTTTTTCAAAACTTTAAATTTTGTGTCCTATAGGCTATAGGCTTATGCTATTAATTTAATATCATCTTAAAATATTTTTAGCACGTGGATAATAAGCTATTTCAAGTTTAAATCTTTTGTTGGTCTTTACTTGTCATAGGTGCAAGAATTTTGCTTTTAGGATCTCTAATGAGAATTTCATTACTCGGTTTGAAGTTCGGATTAGAATAGTCAACGAATGCTTAGAAGCTGCATAGAGAGATAAAAGGTTTTGACACTCAAGTCAATCTAAGTATGATGATCTATTACTCAAAGAGAGAATAGACTCGCGTACCTAAGAAGTGAAACATAACTCTCAATTTATAGGTTTTGACCGGCCGACATTACTTGCTTAATAGTTACGATCGCTCCGTAAATTGTAGCATGTTGTTGGAAAAATGGTTAAGAGTAGCGAAGTGTGATACGTTGATCATCGACTTGCCCTTTACGAGGTCGGTCATTGAGATCCTTATTGGTTGGCTCTGCTTATATGAAGGCATGTATCTCAACCAATAAAGGTGGCTGAACTTGCTTATTCTTCTTTAAAAAGTTATACTTTGAGATAGTGTTATTACGATAACTTGACATTTTCTAACCTACAATTGATTAACATGTGGTGCTTGATAAATCACTCCCAACAACACTCCATTTGTATGTAGTTTTCAATTCAAGTAACTTCAACACAACCTACAAACTAATCAACCATGACTTGAAAGGAATACTAAAAGGAAGAAATAAGAAAAAATGTCGTTCCAAGGAGGAAATAACTCTAGCTTCTCTACCTCTATTAAATATGTTCAATTTTACGACAAACAATAATATTTACCTATAAATAAGAGATATGTGTCTTGTTTTTTTTTAAACAATACTTTCTTATGTCAAATTGCTTTAGATATAACAACAGATAATTAAAAAATGAATTCGTGTATCATAAAAAGTCATAAATTATACAAGTTTTTCAATCTTTTAAGTTCATTTATCTATGATAGGATAAGTATAGAAGTTAGAAGATAAAATATCACGATAGGCTTGAACAAAGATCAATAAGTCCAAGGGCGGAATGAAGGAGGAGAGGGAGCAATCTCCTTTAGTTTGTTGCAACTCAAAAAGTCTATATAAAATACTAAAAGTTTTGTAATTTCCCTCTAGTTCACCGTCTTTGAATGTTTATTAATGAAATACCATATATAAAATATTGAATTACAAAATTCTATATTAATTATAGAAAATTATCTTTAATCTAAAACTTTGATCAGGTTCTAGAAACTGGTTCCTAGGTTATACTTATATACTAGTCTTTGTAAAGTAAAAGGCAACCTACAAACTTACTCATTTAGTTATATAGTTTACCTACATTATTATTTTGGAAATTTGACCTGTGACAAAAAGTTTTTTTTTAACTATAAAAAACCATTTATTTGTACATTTAACGTACATTGCGTCTATTTTATTGTCATTTAAAATTTTGTTTCTTCCTCATAAATTTTATTTGTTGGTATCCATCTAAAACGCACCCTTAAAATTTTGATCAAATTTTAATAAAATCTATAGAAAATAAATAAAAAAAAAGTTATGGCCTGTTGTACAACGATGTAATTTGTAATTGTTAGACAACACTTACAAAATAAGCATAATTAAAAAAAATAATAAATTTATTGCCCAATTGATCCTAAAATTTATAACTTTTTTCCTATGTAATTAGTAAAGTTAATTACACATTTGCACAAGTCACGCATTTAGAAAGCAACTTTATCAAGAAGAATCGAAGAGCTATTTTTGGTATAAAGGGCTTTTTGGACATTTGGCAGAACAAATCGGCAAAAGAGAGTTAGAAGACGACGACGTATCGATGCATGGGGGATTTGTTAGTTTGACCAGTTTAGCCCATCCGCTTGAAGCCCTCGTGGTTTCAGCCCAGACTCAGAGGCATCGTCTTCTGCAAGCGAAGGCCCGACTCGGAAGAAGTTGTTCAGATGGATTTTCATTTAACGCAGCCGTGATTCTCCCTTTTTCTCTCAGCCTCGAAAAGGAAGAAACCAACCCACAGAAACAAGACTCGCCGATAACTGTACCCAGATTCCAATTCTTCTATCCCCTCGATTTTCTACTTCACTGGTATGCCGTGCAGACTTTCACTGTGATTTATTCGCGTTTTCTTTCTTTTCCTTTCAACATCGGGGGTCTTAACTTTGCAGTATCAAAAGTGCCTAGATGTGCTACTGGATTCGTTTGA

mRNA sequence

ATGGCGATCGCTTACCGACCAAGGCACGCCACTCTGAAGTCTGAAGACTTGATCTCGTGTCCTCTACAGTCTCCCGATGAAATCGTAAACACTGAAGCAAAACAAATCGGCAAAAGAGAGTTAGAAGACGACGACGTATCGATGCATGGGGGATTTGTTAGTTTGACCAGTTTAGCCCATCCGCTTGAAGCCCTCGTGGTTTCAGCCCAGACTCAGAGGCATCGTCTTCTGCAAGCGAAGGCCCGACTCGGAAGAAGTTGTTCAGATGGATTTTCATTTAACGCAGCCGTGATTCTCCCTTTTTCTCTCAGCCTCGAAAAGGAAGAAACCAACCCACAGAAACAAGACTCGCCGATAACTGTACCCAGATTCCAATTCTTCTATCCCCTCGATTTTCTACTTCACTGGTATGCCGTGCAGACTTTCACTGTGATTTATTCGCGTTTTCTTTCTTTTCCTTTCAACATCGGGGGTCTTAACTTTGCAGTATCAAAAGTGCCTAGATGTGCTACTGGATTCGTTTGA

Coding sequence (CDS)

ATGGCGATCGCTTACCGACCAAGGCACGCCACTCTGAAGTCTGAAGACTTGATCTCGTGTCCTCTACAGTCTCCCGATGAAATCGTAAACACTGAAGCAAAACAAATCGGCAAAAGAGAGTTAGAAGACGACGACGTATCGATGCATGGGGGATTTGTTAGTTTGACCAGTTTAGCCCATCCGCTTGAAGCCCTCGTGGTTTCAGCCCAGACTCAGAGGCATCGTCTTCTGCAAGCGAAGGCCCGACTCGGAAGAAGTTGTTCAGATGGATTTTCATTTAACGCAGCCGTGATTCTCCCTTTTTCTCTCAGCCTCGAAAAGGAAGAAACCAACCCACAGAAACAAGACTCGCCGATAACTGTACCCAGATTCCAATTCTTCTATCCCCTCGATTTTCTACTTCACTGGTATGCCGTGCAGACTTTCACTGTGATTTATTCGCGTTTTCTTTCTTTTCCTTTCAACATCGGGGGTCTTAACTTTGCAGTATCAAAAGTGCCTAGATGTGCTACTGGATTCGTTTGA

Protein sequence

MAIAYRPRHATLKSEDLISCPLQSPDEIVNTEAKQIGKRELEDDDVSMHGGFVSLTSLAHPLEALVVSAQTQRHRLLQAKARLGRSCSDGFSFNAAVILPFSLSLEKEETNPQKQDSPITVPRFQFFYPLDFLLHWYAVQTFTVIYSRFLSFPFNIGGLNFAVSKVPRCATGFV
Homology
The following BLAST results are available for this feature:
BLAST of MS025923.1 vs.
Match NameE-valueIdentityDescription
BLAST of MS025923.1 vs.
Match NameE-valueIdentityDescription
BLAST of MS025923.1 vs.
Match NameE-valueIdentityDescription
BLAST of MS025923.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MS025923MS025923gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MS025923.1-cdsMS025923.1-cds-scaffold878:399298..399320CDS
MS025923.1-cdsMS025923.1-cds-scaffold878:399415..399491CDS
MS025923.1-cdsMS025923.1-cds-scaffold878:401590..402014CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MS025923.1MS025923.1-proteinpolypeptide