MS024319.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS024319.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	glutaredoxin-C4
Location	scaffold30: 3161181 .. 3163632 (-)
Sequence length	417
RNA-Seq Expression	MS024319.1
Synteny	MS024319.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCGACGGTGAATGTGAGGAAGATGCTAACGGTATCAGCAGCTGTGATGTGCGCCATGGCGGCGGCGTCTTTATGCGGGGCCTCGTCTTCCCCCGAATCGCTCTTCGTCAAGAAGACCATCGCGTCGCATCAGATCGTCATCTTCTCCAAGTCCTATTGCCCGTATTTTCAATCTCCCTCTCTTTCTTATCTCAATCTGTTTATTCATTTCGAACATGGATCTATTATTCTCGTTTCTTAAAGTCGAATTTCGTTGTTCTCCTCTTACACTGCGGTGGCTATGTCTTCAATTGTTTTAATCTTGTTACGCTGCAATTAGAAGCAGATCGAGGATTGATGGATGGATTGAAAGGGGATTTCGGCTTCTACCAATGACGAATTCGAATTTTGGAATTCCGGTTGTTGAATTTTGTTGATTGTGCAATGCAGGTACTGTAGAAGGGCAAAAGCTGTTTTCGAGGAATTGAAGAAAGTTCCTCATGTTGTTGAGCTGGATCGGAGAGGTACTTGCTTAATCTGTCTTCTTGTTGCCATGTTATGAAAATTAACAATAACAACACTCTTATTTACTGCAGAATTTAGCTTAAATTTGATTGAAACCGAGTAACTTTTTTCTTGATATTTAGTTGCTTCCTTTATTTCATGTCTTCTGGCCCCAGCCATTTTATCTAGATTCCTGTCAATTGTTCCGGCTTATTCTCTTCGAATTATGCAAATTTTGGATTGTGATATTACAGTTGGTATGGGCATATTTGAGATTTTTAAAGCTTAGGTCTTAACTTAATGGCTTAGCCTCTTTATTGTCCTTTTCTTCATCTGCCTCTCTTCTCCTTCCATTTTTGTTATTTTCTAATTCATCATAATTTATAAGGATCATCTAGTAAATGAGGGTTGCCTCAACCTTTTAAAATGTTGAATACCTGCAAGTGCAATGATTTTTTTTTTTTGGATAAGAGACGAAATTTATAAACACAAGAAAGAATAAAAGAACAACTTAGGGGCATGAGATGAGAAAGTCCCCTCCCAACAAAAAGCTCAGCGCTTCCCAATCTTGAAGGATCATGGATAAGCCGTAGTTAAAAAATAATTTCTTGTGTTTTAAGCACTATAAGGAAGTTGTTTGCATACACTGTCTAAAAGAATCAAAAGAACCATAAAAAATTATTTGATTTCTTTCCTTCAAAACCTGCAAAAAGAAGCTGCAAGTGCAATGTTTATGTATCAGGTCCAGTGACATGATGCTATTTGAAGTGCTTTCCAAACCAACATGTTTGGTTGGGGATCTTATATTCTCTTCGTCCAAAATTATTAGCCTATCTGCGCATTTTTATCTACTTAGTTTCTGTATTCTTAAATAATCAAAATTTCAAATTACCCTGCCTAATCAGCACAGTTATCTCTCTCTCTCTCGCCGTTGGTTAAGAAGTGTATCCTCTTGGAAGGCAATTCTTTCTAATTTATGTGTTCTTTAGAGAGTTAAAGTTATGGAGGATGAAGAGCAGGATATGGTAAAGGAAGGAGGAAAAGAGCAATGAAAGTGCAAGAGTATGGCCGACTTATGTTACTTGAAATGTCTTTTCACTGAGAAAAAAAATCTCGAAAATGGGTTGACTGGTTATTTCATGTACTGTGTGCTTTATCTTCTTTTTTTATCTTTATAGTTTCGGTGCAGGTGTCTTGTTTTGTTTTGTTTCCGTTTTCGACAAGGGTGGAAAGAATTCAAACTCTGGATGAATTCTCTAAATCAACTGGCCAAAACTCTTATCAGTGGACATATATCCAGCTATTGTTTCCATATATTTTTCTATCCAGCGTTATTTCCTTGTGCTGTTCTATTACTTATATCCTAAAGGTAATTTATTCATAGAATTTGGATCTGTATCACACAGATGATGGTCGTGAAATCCAAGATGCTGTTGGTGAACTTGTTGGAAGGCACACTGTACCTCAAGTGTTCATTGATGGAAAACACATAGGTGGATCAGATGGTAATTGGCTCTTCTTTCACAGCTTAGGTCCCGTTTAATAACAAATTTGTTTTTGGTTTTCTGTTTTCTAAAATAAGATTTAGCTTATAAACACTATTTTTTTCTTTGCTTTGATATCTACCGTTTTAAAACATTTTCAAAATCCAACTCAATTTTCAAAAACTAAAACAAAAACTTTTTAAAAAAAAAAAAAATTTGGCTAAGAATTCGCATGTGTTTTTAAGTAGAGTGGAAATATACTAAAGAAATTGTAAACAAACAACCATAATTTTAAAAAACATACACCTAAAAACAAAAGGGTTATCTAACAAGGCCTTTAGTCGTCCATAATATGCTTTTCTTTAAAGTACTTTTTTCTACTCATTGAAACTCTGATTTCCAGATACTGTTGCTGCATATGAGAGTGGAAAATTGAGCAAACTCCTGGGCATTAAGGAAGAGGATAGAGCAGATCTCTGA

mRNA sequence

ATGGCGGCGACGGTGAATGTGAGGAAGATGCTAACGGTATCAGCAGCTGTGATGTGCGCCATGGCGGCGGCGTCTTTATGCGGGGCCTCGTCTTCCCCCGAATCGCTCTTCGTCAAGAAGACCATCGCGTCGCATCAGATCGTCATCTTCTCCAAGTCCTATTGCCCGTACTGTAGAAGGGCAAAAGCTGTTTTCGAGGAATTGAAGAAAGTTCCTCATGTTGTTGAGCTGGATCGGAGAGATGATGGTCGTGAAATCCAAGATGCTGTTGGTGAACTTGTTGGAAGGCACACTGTACCTCAAGTGTTCATTGATGGAAAACACATAGGTGGATCAGATGATACTGTTGCTGCATATGAGAGTGGAAAATTGAGCAAACTCCTGGGCATTAAGGAAGAGGATAGAGCAGATCTCTGA

Coding sequence (CDS)

ATGGCGGCGACGGTGAATGTGAGGAAGATGCTAACGGTATCAGCAGCTGTGATGTGCGCCATGGCGGCGGCGTCTTTATGCGGGGCCTCGTCTTCCCCCGAATCGCTCTTCGTCAAGAAGACCATCGCGTCGCATCAGATCGTCATCTTCTCCAAGTCCTATTGCCCGTACTGTAGAAGGGCAAAAGCTGTTTTCGAGGAATTGAAGAAAGTTCCTCATGTTGTTGAGCTGGATCGGAGAGATGATGGTCGTGAAATCCAAGATGCTGTTGGTGAACTTGTTGGAAGGCACACTGTACCTCAAGTGTTCATTGATGGAAAACACATAGGTGGATCAGATGATACTGTTGCTGCATATGAGAGTGGAAAATTGAGCAAACTCCTGGGCATTAAGGAAGAGGATAGAGCAGATCTCTGA

Protein sequence

MAATVNVRKMLTVSAAVMCAMAAASLCGASSSPESLFVKKTIASHQIVIFSKSYCPYCRRAKAVFEELKKVPHVVELDRRDDGREIQDAVGELVGRHTVPQVFIDGKHIGGSDDTVAAYESGKLSKLLGIKEEDRADL

Homology

[Close]

BLAST of MS024319.1 vs. NCBI nr
Match: XP_022135442.1 (glutaredoxin-C4 [Momordica charantia])

HSP 1 Score: 265.4 bits (677), Expect = 2.8e-67
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MAATVNVRKMLTVSAAVMCAMAAASLCGASSSPESLFVKKTIASHQIVIFSKSYCPYCRR 60
           MAATVNVRKMLTVSAAVMCAMAAASLCGASSSPESLFVKKTIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATVNVRKMLTVSAAVMCAMAAASLCGASSSPESLFVKKTIASHQIVIFSKSYCPYCRR 60

Query: 61  AKAVFEELKKVPHVVELDRRDDGREIQDAVGELVGRHTVPQVFIDGKHIGGSDDTVAAYE 120
           AKAVFEELKKVPHVVELDRRDDGREIQDAVGELVGRHTVPQVFIDGKHIGGSDDTVAAYE
Sbjct: 61  AKAVFEELKKVPHVVELDRRDDGREIQDAVGELVGRHTVPQVFIDGKHIGGSDDTVAAYE 120

Query: 121 SGKLSKLLGIKEEDRADL 139
           SGKLSKLLGIKEEDRADL
Sbjct: 121 SGKLSKLLGIKEEDRADL 138

[Close]

BLAST of MS024319.1 vs. NCBI nr
Match: XP_038878490.1 (glutaredoxin-C4 [Benincasa hispida])

HSP 1 Score: 210.3 bits (534), Expect = 1.1e-50
Identity = 106/138 (76.81%), Postives = 121/138 (87.68%), Query Frame = 0


Query: 1   MAATVNVRKMLTVSAAVMCAMAAASLCGASSSPESLFVKKTIASHQIVIFSKSYCPYCRR 60
           M ATVN+RKMLT SAA++CA+A  SLCGA SSPE+ F+K TI+SHQIVIFSKSYCPYCRR
Sbjct: 1   MTATVNMRKMLTASAAMVCAVAVVSLCGALSSPETRFIKNTISSHQIVIFSKSYCPYCRR 60

Query: 61  AKAVFEELKKVPHVVELDRRDDGREIQDAVGELVGRHTVPQVFIDGKHIGGSDDTVAAYE 120
           AKAVF+EL+KVPHVVELD+RDDG  IQDA+   VG  TVPQVFI GKHIGGSDDTV AYE
Sbjct: 61  AKAVFKELRKVPHVVELDQRDDGSAIQDALSARVGSRTVPQVFIGGKHIGGSDDTVEAYE 120

Query: 121 SGKLSKLLGIKEEDRADL 139
           SG+L KLLGIKE+++ADL
Sbjct: 121 SGELGKLLGIKEDNKADL 138

[Close]

BLAST of MS024319.1 vs. NCBI nr
Match: XP_004146344.1 (glutaredoxin-C4 [Cucumis sativus] >KGN65502.1 hypothetical protein Csa_019592 [Cucumis sativus])

HSP 1 Score: 209.9 bits (533), Expect = 1.4e-50
Identity = 108/138 (78.26%), Postives = 124/138 (89.86%), Query Frame = 0


Query: 1   MAATVNVRKMLTVSAAVMCAMAAASLCGASSSPESLFVKKTIASHQIVIFSKSYCPYCRR 60
           MAATV++RK+LT SAA++CA+A ASLCGASSSPES F+K TIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATVSMRKILTASAAMVCAVAIASLCGASSSPES-FIKNTIASHQIVIFSKSYCPYCRR 60

Query: 61  AKAVFEELKKVPHVVELDRRDDGREIQDAVGELVGRHTVPQVFIDGKHIGGSDDTVAAYE 120
           AKAVF+EL KVPHVVELD+RDDG  +Q+A+  L GR TVPQVFIDGKHIGGSDDT+ AYE
Sbjct: 61  AKAVFKELHKVPHVVELDQRDDGSSLQNALSVLFGRRTVPQVFIDGKHIGGSDDTLEAYE 120

Query: 121 SGKLSKLLGIKEEDRADL 139
           SG+L KLLGIKE+ +ADL
Sbjct: 121 SGELRKLLGIKEDHKADL 137

[Close]

BLAST of MS024319.1 vs. NCBI nr
Match: TYK28556.1 (glutaredoxin-C4-like [Cucumis melo var. makuwa])

HSP 1 Score: 209.9 bits (533), Expect = 1.4e-50
Identity = 109/138 (78.99%), Postives = 124/138 (89.86%), Query Frame = 0


Query: 1   MAATVNVRKMLTVSAAVMCAMAAASLCGASSSPESLFVKKTIASHQIVIFSKSYCPYCRR 60
           MAATV++RK+LT SAA++CA+A ASLC ASSSPES F+K TIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATVSMRKILTASAAMVCAVAIASLCRASSSPES-FIKNTIASHQIVIFSKSYCPYCRR 60

Query: 61  AKAVFEELKKVPHVVELDRRDDGREIQDAVGELVGRHTVPQVFIDGKHIGGSDDTVAAYE 120
           AKAVF+EL KVPHVVELD+RDDG  +Q+A+  L GR TVPQVFIDGKHIGGSDDTV AYE
Sbjct: 61  AKAVFKELNKVPHVVELDQRDDGSALQNALSVLFGRRTVPQVFIDGKHIGGSDDTVEAYE 120

Query: 121 SGKLSKLLGIKEEDRADL 139
           SG+LSKLLGIKE+ +ADL
Sbjct: 121 SGELSKLLGIKEDHKADL 137

[Close]

BLAST of MS024319.1 vs. NCBI nr
Match: XP_022921332.1 (glutaredoxin-C4-like [Cucurbita moschata])

HSP 1 Score: 208.4 bits (529), Expect = 4.0e-50
Identity = 106/138 (76.81%), Postives = 124/138 (89.86%), Query Frame = 0


Query: 1   MAATVNVRKMLTVSAAVMCAMAAASLCGASSSPESLFVKKTIASHQIVIFSKSYCPYCRR 60
           MAAT+++RKMLTVSAA++CA+A ASL GAS+S E+ F+K TIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60

Query: 61  AKAVFEELKKVPHVVELDRRDDGREIQDAVGELVGRHTVPQVFIDGKHIGGSDDTVAAYE 120
           AKAVF+EL KVP+VVELD+R+DG EIQDA   L+GR TVPQVF++GKHIGGSDDT+ AYE
Sbjct: 61  AKAVFKELNKVPYVVELDQREDGSEIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE 120

Query: 121 SGKLSKLLGIKEEDRADL 139
           SGKLSKLLGI EE +ADL
Sbjct: 121 SGKLSKLLGINEEHKADL 138

[Close]

BLAST of MS024319.1 vs. ExPASy Swiss-Prot
Match: Q8LFQ6 (Glutaredoxin-C4 OS=Arabidopsis thaliana OX=3702 GN=GRXC4 PE=2 SV=2)

HSP 1 Score: 160.6 bits (405), Expect = 1.3e-38
Identity = 82/129 (63.57%), Postives = 104/129 (80.62%), Query Frame = 0


Query: 10  MLTVSAAVMCAMAAASLCGASSSPESLFVKKTIASHQIVIFSKSYCPYCRRAKAVFEELK 69
           ML V+     +M ++    A+SSPE+ FVKKTI+SH+IVIFSKSYCPYC++AK+VF EL 
Sbjct: 11  MLLVALVTFISMVSS----AASSPEADFVKKTISSHKIVIFSKSYCPYCKKAKSVFRELD 70

Query: 70  KVPHVVELDRRDDGREIQDAVGELVGRHTVPQVFIDGKHIGGSDDTVAAYESGKLSKLLG 129
           +VP+VVELD R+DG  IQ A+GE+VGR TVPQVFI+GKH+GGSDDTV AYESG+L+KLLG
Sbjct: 71  QVPYVVELDEREDGWSIQTALGEIVGRRTVPQVFINGKHLGGSDDTVDAYESGELAKLLG 130

Query: 130 IKEEDRADL 139
           +     A+L
Sbjct: 131 VSGNKEAEL 135

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BLAST of MS024319.1 vs. ExPASy Swiss-Prot
Match: Q0DAE4 (Glutaredoxin-C8 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC8 PE=2 SV=2)

HSP 1 Score: 154.8 bits (390), Expect = 6.9e-37
Identity = 77/120 (64.17%), Postives = 98/120 (81.67%), Query Frame = 0


Query: 13  VSAAVMCAMAAASLCGASSSPESLFVKKTIASHQIVIFSKSYCPYCRRAKAVFE--ELKK 72
           ++AA + A+AA     + ++ +S FVK T+ +H +VIFSKSYCPYCRRAKAVF+  ELKK
Sbjct: 11  MAAAALIALAALGSAASGTASKSSFVKSTVKAHDVVIFSKSYCPYCRRAKAVFKELELKK 70

Query: 73  VPHVVELDRRDDGREIQDAVGELVGRHTVPQVFIDGKHIGGSDDTVAAYESGKLSKLLGI 131
            P+VVELD+R+DG EIQDA+ ++VGR TVPQVF+ GKH+GGSDDTV AYESGKL+KLL I
Sbjct: 71  EPYVVELDQREDGWEIQDALSDMVGRRTVPQVFVHGKHLGGSDDTVEAYESGKLAKLLNI 130

[Close]

BLAST of MS024319.1 vs. ExPASy Swiss-Prot
Match: Q6H628 (Monothiol glutaredoxin-S6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS6 PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.8e-29
Identity = 65/128 (50.78%), Postives = 92/128 (71.88%), Query Frame = 0


Query: 8   RKMLTVSAAVMCAMAAASLCGASSSPESLFVKKTIASHQIVIFSKSYCPYCRRAKAVFEE 67
           R  + ++  ++  +A A    A+ SP S FV+  I S++I IFSK+YCPY  RAK +F +
Sbjct: 5   RAAVPIAVFLLLVLAEADPAAATRSP-SAFVQNAIYSNRITIFSKTYCPYSMRAKRIFRD 64

Query: 68  LKKVPHVVELDRRDDGREIQDAVGELVGRHTVPQVFIDGKHIGGSDDTVAAYESGKLSKL 127
           LK+ P++VELD R+DGREIQ  + +LVGRHTVPQVF++G+H+GGSDDT  A+ +G+L KL
Sbjct: 65  LKENPYIVELDLREDGREIQSVLLDLVGRHTVPQVFVNGQHVGGSDDTANAHSNGQLQKL 124

Query: 128 LGIKEEDR 136
           LG  +  R
Sbjct: 125 LGNSQSQR 131

[Close]

BLAST of MS024319.1 vs. ExPASy Swiss-Prot
Match: Q9FVX1 (Glutaredoxin-C3 OS=Arabidopsis thaliana OX=3702 GN=GRXC3 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 2.2e-27
Identity = 63/121 (52.07%), Postives = 86/121 (71.07%), Query Frame = 0


Query: 8   RKMLTVSAAVMCAMAAASLCGASSSPESLFVKKTIASHQIVIFSKSYCPYCRRAKAVFEE 67
           R+++  +  +   +   S    +++  S FV+  I S++IVIFSKSYCPYC R+K +F +
Sbjct: 7   RRVVVAALLLFVVLCDLSNSAGAANSVSAFVQNAILSNKIVIFSKSYCPYCLRSKRIFSQ 66

Query: 68  LKKVPHVVELDRRDDGREIQDAVGELVGRHTVPQVFIDGKHIGGSDDTVAAYESGKLSKL 127
           LK+ P VVELD+R+DG +IQ  + E VGR TVPQVF++GKHIGGSDD  AA ESG+L KL
Sbjct: 67  LKEEPFVVELDQREDGDQIQYELLEFVGRRTVPQVFVNGKHIGGSDDLGAALESGQLQKL 126

Query: 128 L 129
           L
Sbjct: 127 L 127

[Close]

BLAST of MS024319.1 vs. ExPASy Swiss-Prot
Match: P55142 (Glutaredoxin-C6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC6 PE=1 SV=2)

HSP 1 Score: 102.8 bits (255), Expect = 3.1e-21
Identity = 48/90 (53.33%), Postives = 62/90 (68.89%), Query Frame = 0


Query: 39  KKTIASHQIVIFSKSYCPYCRRAKAVFEELKKVPHVVELDRRDDGREIQDAVGELVGRHT 98
           K+T+AS  +V++SKSYCP+C R K +FE+L      +ELD   DG E+Q A+ E  G+ T
Sbjct: 7   KETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSALAEWTGQRT 66

Query: 99  VPQVFIDGKHIGGSDDTVAAYESGKLSKLL 129
           VP VFI+GKHIGG DDT+A    GKL  LL
Sbjct: 67  VPNVFINGKHIGGCDDTLALNNEGKLVPLL 96

[Close]

BLAST of MS024319.1 vs. ExPASy TrEMBL
Match: A0A6J1C2Q1 (glutaredoxin-C4 OS=Momordica charantia OX=3673 GN=LOC111007397 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.3e-67
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MAATVNVRKMLTVSAAVMCAMAAASLCGASSSPESLFVKKTIASHQIVIFSKSYCPYCRR 60
           MAATVNVRKMLTVSAAVMCAMAAASLCGASSSPESLFVKKTIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATVNVRKMLTVSAAVMCAMAAASLCGASSSPESLFVKKTIASHQIVIFSKSYCPYCRR 60

Query: 61  AKAVFEELKKVPHVVELDRRDDGREIQDAVGELVGRHTVPQVFIDGKHIGGSDDTVAAYE 120
           AKAVFEELKKVPHVVELDRRDDGREIQDAVGELVGRHTVPQVFIDGKHIGGSDDTVAAYE
Sbjct: 61  AKAVFEELKKVPHVVELDRRDDGREIQDAVGELVGRHTVPQVFIDGKHIGGSDDTVAAYE 120

Query: 121 SGKLSKLLGIKEEDRADL 139
           SGKLSKLLGIKEEDRADL
Sbjct: 121 SGKLSKLLGIKEEDRADL 138

[Close]

BLAST of MS024319.1 vs. ExPASy TrEMBL
Match: A0A5D3DXQ7 (Glutaredoxin-C4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G002030 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 6.7e-51
Identity = 109/138 (78.99%), Postives = 124/138 (89.86%), Query Frame = 0


Query: 1   MAATVNVRKMLTVSAAVMCAMAAASLCGASSSPESLFVKKTIASHQIVIFSKSYCPYCRR 60
           MAATV++RK+LT SAA++CA+A ASLC ASSSPES F+K TIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATVSMRKILTASAAMVCAVAIASLCRASSSPES-FIKNTIASHQIVIFSKSYCPYCRR 60

Query: 61  AKAVFEELKKVPHVVELDRRDDGREIQDAVGELVGRHTVPQVFIDGKHIGGSDDTVAAYE 120
           AKAVF+EL KVPHVVELD+RDDG  +Q+A+  L GR TVPQVFIDGKHIGGSDDTV AYE
Sbjct: 61  AKAVFKELNKVPHVVELDQRDDGSALQNALSVLFGRRTVPQVFIDGKHIGGSDDTVEAYE 120

Query: 121 SGKLSKLLGIKEEDRADL 139
           SG+LSKLLGIKE+ +ADL
Sbjct: 121 SGELSKLLGIKEDHKADL 137

[Close]

BLAST of MS024319.1 vs. ExPASy TrEMBL
Match: A0A0A0LXH3 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G427520 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 6.7e-51
Identity = 108/138 (78.26%), Postives = 124/138 (89.86%), Query Frame = 0


Query: 1   MAATVNVRKMLTVSAAVMCAMAAASLCGASSSPESLFVKKTIASHQIVIFSKSYCPYCRR 60
           MAATV++RK+LT SAA++CA+A ASLCGASSSPES F+K TIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATVSMRKILTASAAMVCAVAIASLCGASSSPES-FIKNTIASHQIVIFSKSYCPYCRR 60

Query: 61  AKAVFEELKKVPHVVELDRRDDGREIQDAVGELVGRHTVPQVFIDGKHIGGSDDTVAAYE 120
           AKAVF+EL KVPHVVELD+RDDG  +Q+A+  L GR TVPQVFIDGKHIGGSDDT+ AYE
Sbjct: 61  AKAVFKELHKVPHVVELDQRDDGSSLQNALSVLFGRRTVPQVFIDGKHIGGSDDTLEAYE 120

Query: 121 SGKLSKLLGIKEEDRADL 139
           SG+L KLLGIKE+ +ADL
Sbjct: 121 SGELRKLLGIKEDHKADL 137

[Close]

BLAST of MS024319.1 vs. ExPASy TrEMBL
Match: A0A6J1E059 (glutaredoxin-C4-like OS=Cucurbita moschata OX=3662 GN=LOC111429636 PE=3 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.9e-50
Identity = 106/138 (76.81%), Postives = 124/138 (89.86%), Query Frame = 0


Query: 1   MAATVNVRKMLTVSAAVMCAMAAASLCGASSSPESLFVKKTIASHQIVIFSKSYCPYCRR 60
           MAAT+++RKMLTVSAA++CA+A ASL GAS+S E+ F+K TIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60

Query: 61  AKAVFEELKKVPHVVELDRRDDGREIQDAVGELVGRHTVPQVFIDGKHIGGSDDTVAAYE 120
           AKAVF+EL KVP+VVELD+R+DG EIQDA   L+GR TVPQVF++GKHIGGSDDT+ AYE
Sbjct: 61  AKAVFKELNKVPYVVELDQREDGSEIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE 120

Query: 121 SGKLSKLLGIKEEDRADL 139
           SGKLSKLLGI EE +ADL
Sbjct: 121 SGKLSKLLGINEEHKADL 138

[Close]

BLAST of MS024319.1 vs. ExPASy TrEMBL
Match: A0A5A7UQP8 (Glutaredoxin-C4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G005140 PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.5e-50
Identity = 108/138 (78.26%), Postives = 123/138 (89.13%), Query Frame = 0


Query: 1   MAATVNVRKMLTVSAAVMCAMAAASLCGASSSPESLFVKKTIASHQIVIFSKSYCPYCRR 60
           MAATV++RK+LT SAA++CA+A ASLC ASSSPES F+K  IASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATVSMRKILTASAAMVCAVAIASLCRASSSPES-FIKNAIASHQIVIFSKSYCPYCRR 60

Query: 61  AKAVFEELKKVPHVVELDRRDDGREIQDAVGELVGRHTVPQVFIDGKHIGGSDDTVAAYE 120
           AKAVF+EL KVPHVVELD+RDDG  +Q+A+  L GR TVPQVFIDGKHIGGSDDTV AYE
Sbjct: 61  AKAVFKELNKVPHVVELDQRDDGSALQNALSVLFGRRTVPQVFIDGKHIGGSDDTVEAYE 120

Query: 121 SGKLSKLLGIKEEDRADL 139
           SG+LSKLLGIKE+ +ADL
Sbjct: 121 SGELSKLLGIKEDHKADL 137

[Close]

BLAST of MS024319.1 vs. TAIR 10
Match: AT5G20500.1 (Glutaredoxin family protein )

HSP 1 Score: 160.6 bits (405), Expect = 8.9e-40
Identity = 82/129 (63.57%), Postives = 104/129 (80.62%), Query Frame = 0


Query: 10  MLTVSAAVMCAMAAASLCGASSSPESLFVKKTIASHQIVIFSKSYCPYCRRAKAVFEELK 69
           ML V+     +M ++    A+SSPE+ FVKKTI+SH+IVIFSKSYCPYC++AK+VF EL 
Sbjct: 11  MLLVALVTFISMVSS----AASSPEADFVKKTISSHKIVIFSKSYCPYCKKAKSVFRELD 70

Query: 70  KVPHVVELDRRDDGREIQDAVGELVGRHTVPQVFIDGKHIGGSDDTVAAYESGKLSKLLG 129
           +VP+VVELD R+DG  IQ A+GE+VGR TVPQVFI+GKH+GGSDDTV AYESG+L+KLLG
Sbjct: 71  QVPYVVELDEREDGWSIQTALGEIVGRRTVPQVFINGKHLGGSDDTVDAYESGELAKLLG 130

Query: 130 IKEEDRADL 139
           +     A+L
Sbjct: 131 VSGNKEAEL 135

[Close]

BLAST of MS024319.1 vs. TAIR 10
Match: AT1G77370.1 (Glutaredoxin family protein )

HSP 1 Score: 123.2 bits (308), Expect = 1.6e-28
Identity = 63/121 (52.07%), Postives = 86/121 (71.07%), Query Frame = 0


Query: 8   RKMLTVSAAVMCAMAAASLCGASSSPESLFVKKTIASHQIVIFSKSYCPYCRRAKAVFEE 67
           R+++  +  +   +   S    +++  S FV+  I S++IVIFSKSYCPYC R+K +F +
Sbjct: 7   RRVVVAALLLFVVLCDLSNSAGAANSVSAFVQNAILSNKIVIFSKSYCPYCLRSKRIFSQ 66

Query: 68  LKKVPHVVELDRRDDGREIQDAVGELVGRHTVPQVFIDGKHIGGSDDTVAAYESGKLSKL 127
           LK+ P VVELD+R+DG +IQ  + E VGR TVPQVF++GKHIGGSDD  AA ESG+L KL
Sbjct: 67  LKEEPFVVELDQREDGDQIQYELLEFVGRRTVPQVFVNGKHIGGSDDLGAALESGQLQKL 126

Query: 128 L 129
           L
Sbjct: 127 L 127

[Close]

BLAST of MS024319.1 vs. TAIR 10
Match: AT5G40370.1 (Glutaredoxin family protein )

HSP 1 Score: 88.2 bits (217), Expect = 5.6e-18
Identity = 42/90 (46.67%), Postives = 55/90 (61.11%), Query Frame = 0


Query: 39  KKTIASHQIVIFSKSYCPYCRRAKAVFEELKKVPHVVELDRRDDGREIQDAVGELVGRHT 98
           K+ + S  +V+FSK+YCPYC R K + ++L      VELD   DG +IQ  + E  G+ T
Sbjct: 7   KEIVNSESVVVFSKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAEWTGQRT 66

Query: 99  VPQVFIDGKHIGGSDDTVAAYESGKLSKLL 129
           VP VFI G HIGG D T   ++ GKL  LL
Sbjct: 67  VPNVFIGGNHIGGCDATSNLHKDGKLVPLL 96

[Close]

BLAST of MS024319.1 vs. TAIR 10
Match: AT5G63030.1 (Thioredoxin superfamily protein )

HSP 1 Score: 86.7 bits (213), Expect = 1.6e-17
Identity = 41/90 (45.56%), Postives = 57/90 (63.33%), Query Frame = 0


Query: 39  KKTIASHQIVIFSKSYCPYCRRAKAVFEELKKVPHVVELDRRDDGREIQDAVGELVGRHT 98
           K+ ++++ +V+FSK+YC YC+R K +  +L     V+ELD   DG EIQ A+ E  G+ T
Sbjct: 23  KEIVSAYPVVVFSKTYCGYCQRVKQLLTQLGATFKVLELDEMSDGGEIQSALSEWTGQTT 82

Query: 99  VPQVFIDGKHIGGSDDTVAAYESGKLSKLL 129
           VP VFI G HIGG D  +   + GKL  LL
Sbjct: 83  VPNVFIKGNHIGGCDRVMETNKQGKLVPLL 112

[Close]

BLAST of MS024319.1 vs. TAIR 10
Match: AT2G20270.1 (Thioredoxin superfamily protein )

HSP 1 Score: 85.5 bits (210), Expect = 3.7e-17
Identity = 44/113 (38.94%), Postives = 73/113 (64.60%), Query Frame = 0


Query: 19  CAMAAASLCGASSSPESL--FVKKTIASHQIVIFSKSYCPYCRRAKAVFEELKKVPHVVE 78
           C+   A    +SSS  +L   VK T+A + +V++SK++C Y  + K++F+ L+  P VVE
Sbjct: 57  CSSVKAMSSSSSSSGSTLEETVKTTVAENPVVVYSKTWCSYSSQVKSLFKSLQVEPLVVE 116

Query: 79  LDR-RDDGREIQDAVGELVGRHTVPQVFIDGKHIGGSDDTVAAYESGKLSKLL 129
           LD+   +G ++Q+ + ++ G++TVP VFI GKHIGG  DT+  +  G+L  +L
Sbjct: 117 LDQLGSEGSQLQNVLEKITGQYTVPNVFIGGKHIGGCSDTLQLHNKGELEAIL 169

The following BLAST results are available for this feature:

BLAST of MS024319.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135442.1	2.8e-67	100.00	glutaredoxin-C4 [Momordica charantia]	[more]
XP_038878490.1	1.1e-50	76.81	glutaredoxin-C4 [Benincasa hispida]	[more]
XP_004146344.1	1.4e-50	78.26	glutaredoxin-C4 [Cucumis sativus] >KGN65502.1 hypothetical protein Csa_019592 [C...	[more]
TYK28556.1	1.4e-50	78.99	glutaredoxin-C4-like [Cucumis melo var. makuwa]	[more]
XP_022921332.1	4.0e-50	76.81	glutaredoxin-C4-like [Cucurbita moschata]	[more]

BLAST of MS024319.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LFQ6	1.3e-38	63.57	Glutaredoxin-C4 OS=Arabidopsis thaliana OX=3702 GN=GRXC4 PE=2 SV=2	[more]
Q0DAE4	6.9e-37	64.17	Glutaredoxin-C8 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC8 PE=2 SV=2	[more]
Q6H628	1.8e-29	50.78	Monothiol glutaredoxin-S6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS6 PE=2...	[more]
Q9FVX1	2.2e-27	52.07	Glutaredoxin-C3 OS=Arabidopsis thaliana OX=3702 GN=GRXC3 PE=2 SV=1	[more]
P55142	3.1e-21	53.33	Glutaredoxin-C6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC6 PE=1 SV=2	[more]

BLAST of MS024319.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C2Q1	1.3e-67	100.00	glutaredoxin-C4 OS=Momordica charantia OX=3673 GN=LOC111007397 PE=3 SV=1	[more]
A0A5D3DXQ7	6.7e-51	78.99	Glutaredoxin-C4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629...	[more]
A0A0A0LXH3	6.7e-51	78.26	Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G42752...	[more]
A0A6J1E059	1.9e-50	76.81	glutaredoxin-C4-like OS=Cucurbita moschata OX=3662 GN=LOC111429636 PE=3 SV=1	[more]
A0A5A7UQP8	2.5e-50	78.26	Glutaredoxin-C4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274...	[more]

BLAST of MS024319.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20500.1	8.9e-40	63.57	Glutaredoxin family protein	[more]
AT1G77370.1	1.6e-28	52.07	Glutaredoxin family protein	[more]
AT5G40370.1	5.6e-18	46.67	Glutaredoxin family protein	[more]
AT5G63030.1	1.6e-17	45.56	Thioredoxin superfamily protein	[more]
AT2G20270.1	3.7e-17	38.94	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 47..65 score: 47.81 coord: 92..105 score: 51.79 coord: 106..119 score: 44.94
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 47..109 e-value: 8.2E-20 score: 70.8
IPR011899	Glutaredoxin, eukaryotic/virial	TIGRFAM	TIGR02180	TIGR02180	coord: 47..128 e-value: 1.2E-29 score: 100.3
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 36..137 e-value: 1.5E-37 score: 129.9
None	No IPR available	PANTHER	PTHR45694:SF19	BNAA02G04900D PROTEIN	coord: 25..125
None	No IPR available	PANTHER	PTHR45694	GLUTAREDOXIN 2	coord: 25..125
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 35..135 score: 23.480814
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 47..127 e-value: 4.41637E-45 score: 139.982
IPR011767	Glutaredoxin active site	PROSITE	PS00195	GLUTAREDOXIN_1	coord: 49..64
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 38..128

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS024319	MS024319	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS024319.1-cds	MS024319.1-cds-scaffold30:3161181..3161257	CDS
MS024319.1-cds	MS024319.1-cds-scaffold30:3161640..3161738	CDS
MS024319.1-cds	MS024319.1-cds-scaffold30:3163125..3163198	CDS
MS024319.1-cds	MS024319.1-cds-scaffold30:3163466..3163632	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS024319.1	MS024319.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0004362	glutathione-disulfide reductase (NADPH) activity
molecular_function	GO:0097573	glutathione oxidoreductase activity