MS023992.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS023992.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Location	scaffold44: 1638619 .. 1638837 (+)
Sequence length	219
RNA-Seq Expression	MS023992.1
Synteny	MS023992.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCTGGATTTCCGGCAACTTCGTTTGAAGAATTGCAACTTGCGAGGCCATCTCCGGCGAGATGGATCGAACGGAGAGAGAACACCGAGAATCGACTTCATCGCTCGGTAAAATACAGCGATGATGCAATGGAGCAACGTCCAAAACGTGGCTTCCCTCCACCAAACCCCGGGAAAAATATTGTGGCCGTTTGGTCTAAAGGTTTCAAACCATAG

mRNA sequence

ATGGCGGCTGGATTTCCGGCAACTTCGTTTGAAGAATTGCAACTTGCGAGGCCATCTCCGGCGAGATGGATCGAACGGAGAGAGAACACCGAGAATCGACTTCATCGCTCGGTAAAATACAGCGATGATGCAATGGAGCAACGTCCAAAACGTGGCTTCCCTCCACCAAACCCCGGGAAAAATATTGTGGCCGTTTGGTCTAAAGGTTTCAAACCATAG

Coding sequence (CDS)

ATGGCGGCTGGATTTCCGGCAACTTCGTTTGAAGAATTGCAACTTGCGAGGCCATCTCCGGCGAGATGGATCGAACGGAGAGAGAACACCGAGAATCGACTTCATCGCTCGGTAAAATACAGCGATGATGCAATGGAGCAACGTCCAAAACGTGGCTTCCCTCCACCAAACCCCGGGAAAAATATTGTGGCCGTTTGGTCTAAAGGTTTCAAACCATAG

Protein sequence

MAAGFPATSFEELQLARPSPARWIERRENTENRLHRSVKYSDDAMEQRPKRGFPPPNPGKNIVAVWSKGFKP

Homology

The following BLAST results are available for this feature:

BLAST of MS023992.1 vs.


Match Name	E-value	Identity	Description

BLAST of MS023992.1 vs.


Match Name	E-value	Identity	Description

BLAST of MS023992.1 vs.


Match Name	E-value	Identity	Description

BLAST of MS023992.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..49

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS023992	MS023992	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS023992.1-cds	MS023992.1-cds-scaffold44:1638619..1638837	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS023992.1	MS023992.1-protein	polypeptide