MS023173.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS023173.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	vacuolar protein sorting-associated protein 27 isoform X2
Location	scaffold78: 672539 .. 675889 (-)
Sequence length	825
RNA-Seq Expression	MS023173.1
Synteny	MS023173.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGCGGGGCCTCCTCTTTTTCAGGAAGCAGCACGCTGCGAAGTCTGCAAATGCAGTTTCAACACCTTCCGGCGACGGGTACAAAATTGTTCGAATTGAGCTACTGCAATTACAATAATTTTCGATTCTGTTTCGAGCTTTTTATCGCGAGATTGAACGATTTTTTCTATTTTTGTTTTGCAGCATCATTGCCGATGCTGTGGAAGGACGTTGTGCCACGAGCATTCTTCTTTTCAAATGGTATTATTCGTTCCTTTTCCTCTTGGTGGTTTTGCATAAATGGACTCTTTGTTTGCGATCTGAATAGTATATGTCTGTACTGGTTCGTGCATAATTCAGGCCTTGCCGCAGTTCGGTATTCATTCCCCTGTTAGAGTTTGTGCTGACTGTTTCAATAACTCCTCTCAGTAAGTCATGCTTAAATGTAGTCAATACACTTATCCTTGAAAATTAGCTGGTATTGGAAATGAAGTTTCATGCGGAGTCCTTTGGCCATACAAGAAAGGATTGTATTAAGCTGAAGTTTTACTTCTCAACTCCTGTTTGATAATTCATTTCGTCCTGCATAAATTATAAGCTGAGAATTTAAAGTGCTTGAGTAGAAACTGAAAGGGAAAGATGCAACACGATACTTTATTTGATGCAAGAACTCCTGTTGCACCTTATTGGTTGAAATTGCTTGTTAGAAGTTTGAAGTTCTAGAATATTGTTTCCTAGCAAGAAACTTGAATTAAAAGATAAGAAACTTAAAAATTCTAATTGGAATCAGGCGTTTTTGTATCAAGGACTTAGGTTGTATGATAGTCCAAAAATTTTGGATTTTGGAACCTGTACATAGACAATCAAGAAAATTTATTCCTCATTTTTTTTTTTTTTGATAACGAGCAAACTTATTAATTGGGTTTGCCATATCACAGATCTAGAGATGTTGGTCAATCACCATCCTTAGCTGTAGTTGATCAAGTTGCAGATACAGTTTCCCAATTAAACCTTGATGCAGATGTAAATTCTGAGTCTAAACCAGCTGTGGAGCATCAACCCGTGCTGGGCATTTCAGATTGCAAGTGTGGAATGCCATTATGCATTTGTGAAACTTCAATCCAGCCTATGGAAACAGAAGCAGTTCCTTCGCAGGTTTTAATATTTAGTGATTTCTAGTGCTCTTCATATATCAGCCATGCCCCTTATGGAACTTGATTATTCTTGTGGCAGAAGAAGACAACTTCCACCTCTTTTCAGTTCAACTCAAAACCAAAGAAGTCTGATTCCAATCTAAAGAATAGAGGATCTACCTCCAGCAGCAAGCTTCGGTATGTTATCTGGAGTTTGATTTATTCTAATAGGCTTGCGTCTGTCTTCTCTCTCTGACCCCATATATGGGAAAAGTAAGATAATCACACTCCTTCATAAGTATGTATGACTTGGGACAGAGACATTTTTTCATTGCATACATTCTTGTGGATGGATTAAGTATCAGATTACCCTTTTTTAACACTGTTGGTGTTATTAATTTGGTCGATAAGTCGGATCTTAATCTACAGTTGTAATTTTCATTATTGAATAGGAATCTTGCAGAGGAATCAAAGATTGATTATGAAGCAAGTGGCGAGGTATATAGTTTGTATTATATTAATATTTCTCTGCTGTCTGTTAAAGGGTTTTAAATTCTGCTTCATCTCTATAATTTCATATTCTTGCAGGGGTTAAGGGAAGCTATCAAGAACGGCGACACTAATGCCGTCAAAAAACTTTTAAGCGAGGTAATAAATTTCTTTCTGCAAATCAAGATATGTAATGAAATTATTTACTCTTTTCATGTTGGCAGGGCGTGGATGCCAATTACCATGACAAGCAAGGACTGTCTTTGCTGCATCTGGTATAGAATCTCTCTCTCTTCCCCCCACCTCACCCCTCAAGAACATGGCATTCTTGTCGGTTTAGAGGTATGATATTGAGATTAATATTAATTTGGATGTAGGCGGCAGTCTTTAATCAGACTGACATTGTTTTCGCTCTTATCGAGAGTGGCGCTAGACTGGACTACAAAAATGCACAAGGTAACTACTAGTCACTGGATCTTGATACAGAGTGTCTTAACATTTATATTAAATCAGAGTACTTTGAGTGGGAAGTTTTAGAATTGGGGCTGTTTAAAAGACTGTCTTGAAAGACACTTTTGTTTTTTAAGTTCTTTTAACCAAAAAATAACATTATTTATGTACAATAAATAATCACAAATGTGTGGTTTTAGAAGAATAAAATTTAACTTTTTCTAGAAATAACTCATTTGTAAGAACATGCTTTATTTTCTTTTGTTTTAGTAAAAAATTATTCAAACTTTTCTTCTAATAAAAATTTCATTATAAAAAACAGGAACTGTTCTGAAAACAAATTTCAGACAACCTTGATTATCAGTTCCATTACCTTTCTCTTTCTTCAAGCTTGGCGATTAAAAACAAAGAAAAATAATAACAATGGAAGGCTTCTGTGTGATTGCACTTACTACAATAAGGATAATATTCTGGTGGTGTCTGAAAGCCGTTAAGTGTTAGCTTTCTAAATTACAGTGATGTTATTAGCATTTTTCTCTAAAAATTAAACAACCTAAGTCACGATTAGAATTTTTTATATTCCTAAAACATTATCCATTCAAAAATCTTATAACTATATATCGTCCCCACTCCCCTTCTGGCTGTTATTGCTGATCCCCGCAGCTGCCATCCCCCCTCACGTGAGAGAGGTGATTGTAAGTTGCAACTGAGTTGAAGCATAGACGTTCGTGTACTTAAGAGACTGATATGAACTGCCTGAGACTTTAATTTATGATAAACTTGTATTTAAAAGTTTCTGATGGAATTTTATTTCTTTTCAATTTTTACCCTTTCAAGAAATAAATTTATTAGAACGGAGAAATATCAACAGGGGAATTCCTATACGACCTCTTTCTAATTTTCACTTAAAATTTCTTTTGCTAGAGAAAGTGAGCATAAGGGAGAAGATAGTTCTCTTAGGAGAGAGAGGGAGAGGGAGAGAGAGAAGGCTGCTTCTTTTATTGAATTCAACATGCGGAGATGAGGATTCAAAACTTAGATCTTTTTGGTTTAAGACATATGCATTAACTAGTTGAACTATGTTCAAGTTGGCAACGAATGCCTGTATGGTACTTGTAGATGCAAAGTAAAAGATCATAGGACCAAATAACATGTACATTGCTTGAGAATAACCTAAGAGAAATGCTGAGATATTACATAATGTTTATTCATTTTGATCACCACCACAGGGGAAACGCCATTGGATTGTGCTCCAGCTGCTTTACAGTATAAGATACGAGAGAAGATGGAAGGACAG

mRNA sequence

ATGTCGGCGGGGCCTCCTCTTTTTCAGGAAGCAGCACGCTGCGAAGTCTGCAAATGCAGTTTCAACACCTTCCGGCGACGGCATCATTGCCGATGCTGTGGAAGGACGTTGTGCCACGAGCATTCTTCTTTTCAAATGGCCTTGCCGCAGTTCGGTATTCATTCCCCTGTTAGAGTTTGTGCTGACTGTTTCAATAACTCCTCTCAATCTAGAGATGTTGGTCAATCACCATCCTTAGCTGTAGTTGATCAAGTTGCAGATACAGTTTCCCAATTAAACCTTGATGCAGATGTAAATTCTGAGTCTAAACCAGCTGTGGAGCATCAACCCGTGCTGGGCATTTCAGATTGCAAGTGTGGAATGCCATTATGCATTTGTGAAACTTCAATCCAGCCTATGGAAACAGAAGCAGTTCCTTCGCAGAAGAAGACAACTTCCACCTCTTTTCAGTTCAACTCAAAACCAAAGAAGTCTGATTCCAATCTAAAGAATAGAGGATCTACCTCCAGCAGCAAGCTTCGGAATCTTGCAGAGGAATCAAAGATTGATTATGAAGCAAGTGGCGAGGGGTTAAGGGAAGCTATCAAGAACGGCGACACTAATGCCGTCAAAAAACTTTTAAGCGAGGGCGTGGATGCCAATTACCATGACAAGCAAGGACTGTCTTTGCTGCATCTGGCGGCAGTCTTTAATCAGACTGACATTGTTTTCGCTCTTATCGAGAGTGGCGCTAGACTGGACTACAAAAATGCACAAGGGGAAACGCCATTGGATTGTGCTCCAGCTGCTTTACAGTATAAGATACGAGAGAAGATGGAAGGACAG

Coding sequence (CDS)

ATGTCGGCGGGGCCTCCTCTTTTTCAGGAAGCAGCACGCTGCGAAGTCTGCAAATGCAGTTTCAACACCTTCCGGCGACGGCATCATTGCCGATGCTGTGGAAGGACGTTGTGCCACGAGCATTCTTCTTTTCAAATGGCCTTGCCGCAGTTCGGTATTCATTCCCCTGTTAGAGTTTGTGCTGACTGTTTCAATAACTCCTCTCAATCTAGAGATGTTGGTCAATCACCATCCTTAGCTGTAGTTGATCAAGTTGCAGATACAGTTTCCCAATTAAACCTTGATGCAGATGTAAATTCTGAGTCTAAACCAGCTGTGGAGCATCAACCCGTGCTGGGCATTTCAGATTGCAAGTGTGGAATGCCATTATGCATTTGTGAAACTTCAATCCAGCCTATGGAAACAGAAGCAGTTCCTTCGCAGAAGAAGACAACTTCCACCTCTTTTCAGTTCAACTCAAAACCAAAGAAGTCTGATTCCAATCTAAAGAATAGAGGATCTACCTCCAGCAGCAAGCTTCGGAATCTTGCAGAGGAATCAAAGATTGATTATGAAGCAAGTGGCGAGGGGTTAAGGGAAGCTATCAAGAACGGCGACACTAATGCCGTCAAAAAACTTTTAAGCGAGGGCGTGGATGCCAATTACCATGACAAGCAAGGACTGTCTTTGCTGCATCTGGCGGCAGTCTTTAATCAGACTGACATTGTTTTCGCTCTTATCGAGAGTGGCGCTAGACTGGACTACAAAAATGCACAAGGGGAAACGCCATTGGATTGTGCTCCAGCTGCTTTACAGTATAAGATACGAGAGAAGATGGAAGGACAG

Protein sequence

MSAGPPLFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFGIHSPVRVCADCFNNSSQSRDVGQSPSLAVVDQVADTVSQLNLDADVNSESKPAVEHQPVLGISDCKCGMPLCICETSIQPMETEAVPSQKKTTSTSFQFNSKPKKSDSNLKNRGSTSSSKLRNLAEESKIDYEASGEGLREAIKNGDTNAVKKLLSEGVDANYHDKQGLSLLHLAAVFNQTDIVFALIESGARLDYKNAQGETPLDCAPAALQYKIREKMEGQ

Homology

[Close]

BLAST of MS023173.1 vs. NCBI nr
Match: XP_022147653.1 (vacuolar protein sorting-associated protein 27 isoform X2 [Momordica charantia])

HSP 1 Score: 550.1 bits (1416), Expect = 1.1e-152
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 1   MSAGPPLFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFGIHSPVRVC 60
           MSAGPPLFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFGIHSPVRVC
Sbjct: 1   MSAGPPLFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFGIHSPVRVC 60

Query: 61  ADCFNNSSQSRDVGQSPSLAVVDQVADTVSQLNLDADVNSESKPAVEHQPVLGISDCKCG 120
           ADCFNNSSQSRDVGQSPSLAVVDQVADTVSQLNLDADVNSESKPAVEHQPVLGISDCKCG
Sbjct: 61  ADCFNNSSQSRDVGQSPSLAVVDQVADTVSQLNLDADVNSESKPAVEHQPVLGISDCKCG 120

Query: 121 MPLCICETSIQPMETEAVPSQKKTTSTSFQFNSKPKKSDSNLKNRGSTSSSKLRNLAEES 180
           MPLCICETSIQPMETEAVPSQKKTTSTSFQFNSKPKKSDSNLKNRGSTSSSKLRNLAEES
Sbjct: 121 MPLCICETSIQPMETEAVPSQKKTTSTSFQFNSKPKKSDSNLKNRGSTSSSKLRNLAEES 180

Query: 181 KIDYEASGEGLREAIKNGDTNAVKKLLSEGVDANYHDKQGLSLLHLAAVFNQTDIVFALI 240
           KIDYEASGEGLREAIKNGDTNAVKKLLSEGVDANYHDKQGLSLLHLAAVFNQTDIVFALI
Sbjct: 181 KIDYEASGEGLREAIKNGDTNAVKKLLSEGVDANYHDKQGLSLLHLAAVFNQTDIVFALI 240

Query: 241 ESGARLDYKNAQGETPLDCAPAALQYKIREKMEGQ 276
           ESGARLDYKNAQGETPLDCAPAALQYKIREKMEGQ
Sbjct: 241 ESGARLDYKNAQGETPLDCAPAALQYKIREKMEGQ 275

[Close]

BLAST of MS023173.1 vs. NCBI nr
Match: XP_022147651.1 (uncharacterized protein LOC111016522 isoform X1 [Momordica charantia])

HSP 1 Score: 502.3 bits (1292), Expect = 2.7e-138
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0


Query: 1   MSAGPPLFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFGIHSPVRVC 60
           MSAGPPLFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFGIHSPVRVC
Sbjct: 1   MSAGPPLFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFGIHSPVRVC 60

Query: 61  ADCFNNSSQSRDVGQSPSLAVVDQVADTVSQLNLDADVNSESKPAVEHQPVLGISDCKCG 120
           ADCFNNSSQSRDVGQSPSLAVVDQVADTVSQLNLDADVNSESKPAVEHQPVLGISDCKCG
Sbjct: 61  ADCFNNSSQSRDVGQSPSLAVVDQVADTVSQLNLDADVNSESKPAVEHQPVLGISDCKCG 120

Query: 121 MPLCICETSIQPMETEAVPSQKKTTSTSFQFNSKPKKSDSNLKNRGSTSSSKLRNLAEES 180
           MPLCICETSIQPMETEAVPSQKKTTSTSFQFNSKPKKSDSNLKNRGSTSSSKLRNLAEES
Sbjct: 121 MPLCICETSIQPMETEAVPSQKKTTSTSFQFNSKPKKSDSNLKNRGSTSSSKLRNLAEES 180

Query: 181 KIDYEASGEGLREAIKNGDTNAVKKLLSEGVDANYHDKQGLSLLHLAAVFNQTDIVFALI 240
           KIDYEASGEGLREAIKNGDTNAVKKLLSEGVDANYHDKQGLSLLHLAAVFNQTDIVFALI
Sbjct: 181 KIDYEASGEGLREAIKNGDTNAVKKLLSEGVDANYHDKQGLSLLHLAAVFNQTDIVFALI 240

Query: 241 ESGARLDYKNAQ 253
           ESGARLDYKNAQ
Sbjct: 241 ESGARLDYKNAQ 252

[Close]

BLAST of MS023173.1 vs. NCBI nr
Match: KAA0055738.1 (vacuolar protein sorting-associated protein 27 [Cucumis melo var. makuwa] >TYK09987.1 vacuolar protein sorting-associated protein 27 [Cucumis melo var. makuwa])

HSP 1 Score: 491.5 bits (1264), Expect = 4.7e-135
Identity = 243/275 (88.36%), Postives = 257/275 (93.45%), Query Frame = 0


Query: 1   MSAGPPLFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFGIHSPVRVC 60
           MS  PP FQEAARC+VCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFGIHS VRVC
Sbjct: 1   MSVEPPPFQEAARCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFGIHSSVRVC 60

Query: 61  ADCFNNSSQSRDVGQSPSLAVVDQVADTVSQLNLDADVNSESKPAVEHQPVLGISDCKCG 120
           ADCFNNSSQS+ VGQ PSLAVVDQV DTVSQL+LD D+NSE KPAVEHQP LGI DCKCG
Sbjct: 61  ADCFNNSSQSKVVGQPPSLAVVDQVGDTVSQLSLDGDLNSEPKPAVEHQPALGIPDCKCG 120

Query: 121 MPLCICETSIQPMETEAVPSQKKTTSTSFQFNSKPKKSDSNLKNRGSTSSSKLRNLAEES 180
           MPLCICET  QPMETEAVPSQKKT STS Q+N KPKK+DSNL+NRGSTS+SKLRNLA+ES
Sbjct: 121 MPLCICETPAQPMETEAVPSQKKTASTSTQYNPKPKKTDSNLRNRGSTSNSKLRNLADES 180

Query: 181 KIDYEASGEGLREAIKNGDTNAVKKLLSEGVDANYHDKQGLSLLHLAAVFNQTDIVFALI 240
           +I+YEASGEGLREAIKNGDT AVKKLLSEGVDANYHDKQGLSLLH+AAVFNQTDIVFALI
Sbjct: 181 RINYEASGEGLREAIKNGDTIAVKKLLSEGVDANYHDKQGLSLLHVAAVFNQTDIVFALI 240

Query: 241 ESGARLDYKNAQGETPLDCAPAALQYKIREKMEGQ 276
           E+GA LDYKNAQGETPLDCAPA+LQYKIREKMEGQ
Sbjct: 241 ENGASLDYKNAQGETPLDCAPASLQYKIREKMEGQ 275

[Close]

BLAST of MS023173.1 vs. NCBI nr
Match: XP_038878461.1 (vacuolar protein sorting-associated protein 27 [Benincasa hispida])

HSP 1 Score: 489.2 bits (1258), Expect = 2.3e-134
Identity = 244/274 (89.05%), Postives = 256/274 (93.43%), Query Frame = 0


Query: 1   MSAGPPLFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFGIHSPVRVC 60
           MS  PP FQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFGIH  VRVC
Sbjct: 1   MSVEPPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFGIHFSVRVC 60

Query: 61  ADCFNNSSQSRDVGQSPSLAVVDQVADTVSQLNLDADVNSESKPAVEHQPVLGISDCKCG 120
           ADCFNNSSQSRD  Q P LAVVDQVADTVSQL+LD DVNSESKPAVEHQP LGI DCKCG
Sbjct: 61  ADCFNNSSQSRDDVQPPLLAVVDQVADTVSQLSLDQDVNSESKPAVEHQPALGIPDCKCG 120

Query: 121 MPLCICETSIQPMETEAVPSQKKTTSTSFQFNSKPKKSDSNLKNRGSTSSSKLRNLAEES 180
           MPLCICET +Q METEAVPSQ+KT STS Q+NSKPKK+DSNL+NRGSTS+SKLRNLA+ES
Sbjct: 121 MPLCICETPVQSMETEAVPSQRKTASTSTQYNSKPKKTDSNLRNRGSTSNSKLRNLADES 180

Query: 181 KIDYEASGEGLREAIKNGDTNAVKKLLSEGVDANYHDKQGLSLLHLAAVFNQTDIVFALI 240
           +I+YEASGEGLREAIKNGDT AVKKLLSEGVDANYHDKQGLSLLH+AAVFNQTDIVFALI
Sbjct: 181 RINYEASGEGLREAIKNGDTIAVKKLLSEGVDANYHDKQGLSLLHVAAVFNQTDIVFALI 240

Query: 241 ESGARLDYKNAQGETPLDCAPAALQYKIREKMEG 275
           ESGA LDYKNAQGETPLDCAPA+LQYKIREKMEG
Sbjct: 241 ESGASLDYKNAQGETPLDCAPASLQYKIREKMEG 274

[Close]

BLAST of MS023173.1 vs. NCBI nr
Match: XP_023516961.1 (vacuolar protein sorting-associated protein 27-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 485.3 bits (1248), Expect = 3.4e-133
Identity = 244/276 (88.41%), Postives = 256/276 (92.75%), Query Frame = 0


Query: 1   MSAGPPLFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFGIHSPVRVC 60
           MS  PP FQEAARC+VCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFGI S VRVC
Sbjct: 1   MSVEPPPFQEAARCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFGIQSSVRVC 60

Query: 61  ADCFNNSSQSRDVGQSPSLAVVDQVADTVSQLNLDADVNSESKPAVEHQPVLGISDCKCG 120
            DCFN SSQSR+VGQ PSLAVVDQVADTVS+LNLD DVNSE KPAVEHQP  GISDCKCG
Sbjct: 61  GDCFNVSSQSREVGQPPSLAVVDQVADTVSKLNLDGDVNSEPKPAVEHQPAFGISDCKCG 120

Query: 121 MPLCICETSIQPMETEAVPSQKKTTSTSFQFNSKPKKSDSNLKNRGSTSSSKLRNL-AEE 180
           MPLCICET +Q METEAVPSQKKT STS Q+NSKPKKSDSNL+NRGSTS+SKLRNL A+E
Sbjct: 121 MPLCICETPVQSMETEAVPSQKKTASTSTQYNSKPKKSDSNLRNRGSTSNSKLRNLAADE 180

Query: 181 SKIDYEASGEGLREAIKNGDTNAVKKLLSEGVDANYHDKQGLSLLHLAAVFNQTDIVFAL 240
           S+I+YEASGEGLREAIKNGDT AVKKLLSEGVDANYHDKQGLSLLH+AAVFNQTDIVFAL
Sbjct: 181 SRINYEASGEGLREAIKNGDTIAVKKLLSEGVDANYHDKQGLSLLHVAAVFNQTDIVFAL 240

Query: 241 IESGARLDYKNAQGETPLDCAPAALQYKIREKMEGQ 276
           IESGA LDYKNAQGETPLDCAPA+LQYKIREKM GQ
Sbjct: 241 IESGASLDYKNAQGETPLDCAPASLQYKIREKMGGQ 276

[Close]

BLAST of MS023173.1 vs. ExPASy Swiss-Prot
Match: Q755J9 (Vacuolar protein sorting-associated protein 27 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=VPS27 PE=3 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 5.8e-11
Identity = 28/64 (43.75%), Postives = 40/64 (62.50%), Query Frame = 0


Query: 2   SAGPPLFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFGIHSPVRVCA 61
           S  P  + ++  C +C  +F    R+HHCR CG   C+EHSS Q+ LP+ GI  PVRVC 
Sbjct: 169 SKAPADWVDSDACMICSNAFTFLNRKHHCRSCGGIFCNEHSSHQLPLPEMGITEPVRVCD 228

Query: 62  DCFN 66
           +C++
Sbjct: 229 NCYD 232

[Close]

BLAST of MS023173.1 vs. ExPASy Swiss-Prot
Match: P40343 (Vacuolar protein sorting-associated protein 27 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=VPS27 PE=1 SV=3)

HSP 1 Score: 67.8 bits (164), Expect = 2.2e-10
Identity = 29/70 (41.43%), Postives = 38/70 (54.29%), Query Frame = 0


Query: 2   SAGPPLFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFGIHSPVRVCA 61
           S  P  + ++  C +C   F+   R+HHCR CG   C EHSS  + LP  GI+ PVRVC 
Sbjct: 164 SKTPADWIDSDACMICSKKFSLLNRKHHCRSCGGVFCQEHSSNSIPLPDLGIYEPVRVCD 223

Query: 62  DCFNNSSQSR 72
            CF +    R
Sbjct: 224 SCFEDYDLKR 233

[Close]

BLAST of MS023173.1 vs. ExPASy Swiss-Prot
Match: B4G2G5 (Lateral signaling target protein 2 homolog OS=Drosophila persimilis OX=7234 GN=GL23610 PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.4e-09
Identity = 30/72 (41.67%), Postives = 40/72 (55.56%), Query Frame = 0


Query: 10  EAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFGIHSPVRVCADCFNNSSQ 69
           +A RC  C+  F  FRRRHHCR CG   C   S+    LP++G+   VRVC DC+    Q
Sbjct: 919 KAPRCMSCQTPFTAFRRRHHCRNCGGVFCGVCSNATAPLPKYGLTKAVRVCRDCYVREVQ 978

Query: 70  SRDVGQSPSLAV 82
            R    + S++V
Sbjct: 979 VRSSSTTTSVSV 990

[Close]

BLAST of MS023173.1 vs. ExPASy Swiss-Prot
Match: Q17AN2 (Lateral signaling target protein 2 homolog OS=Aedes aegypti OX=7159 GN=AAEL005241 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.9e-09
Identity = 28/55 (50.91%), Postives = 33/55 (60.00%), Query Frame = 0


Query: 10  EAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFGIHSPVRVCADCF 65
           +A RC  C  SF  FRRRHHCR CG   C   SS    LP++G+   VRVC DC+
Sbjct: 852 DAPRCMACASSFTPFRRRHHCRNCGGVFCGVCSSASAPLPKYGLTKAVRVCRDCY 906

[Close]

BLAST of MS023173.1 vs. ExPASy Swiss-Prot
Match: Q6FQJ1 (Vacuolar protein sorting-associated protein 27 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) OX=284593 GN=VPS27 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.9e-09
Identity = 37/122 (30.33%), Postives = 56/122 (45.90%), Query Frame = 0


Query: 2   SAGPPLFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFGIHSPVRVCA 61
           S  P  + ++  C +C   F+   RRHHCR CG   C +HSS  + LP  GI+  VRVC 
Sbjct: 164 SKTPADWIDSDACMICSKKFSLLNRRHHCRSCGGVFCQDHSSKSIPLPDLGIYDSVRVCD 223

Query: 62  DCFNNSSQSRDVG---------QSPSLAVVDQVADTVSQLNLDADVNSESK----PAVEH 111
           +C+++    +  G         +S   A  D+  D    + L    ++ S     P VE 
Sbjct: 224 NCYDDYDYKKGSGSQGKKRKHRKSHRHATEDEDEDLRKAIELSLRASNSSVEPVIPVVES 283

[Close]

BLAST of MS023173.1 vs. ExPASy TrEMBL
Match: A0A6J1D1W6 (vacuolar protein sorting-associated protein 27 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111016522 PE=4 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 5.4e-153
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 1   MSAGPPLFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFGIHSPVRVC 60
           MSAGPPLFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFGIHSPVRVC
Sbjct: 1   MSAGPPLFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFGIHSPVRVC 60

Query: 61  ADCFNNSSQSRDVGQSPSLAVVDQVADTVSQLNLDADVNSESKPAVEHQPVLGISDCKCG 120
           ADCFNNSSQSRDVGQSPSLAVVDQVADTVSQLNLDADVNSESKPAVEHQPVLGISDCKCG
Sbjct: 61  ADCFNNSSQSRDVGQSPSLAVVDQVADTVSQLNLDADVNSESKPAVEHQPVLGISDCKCG 120

Query: 121 MPLCICETSIQPMETEAVPSQKKTTSTSFQFNSKPKKSDSNLKNRGSTSSSKLRNLAEES 180
           MPLCICETSIQPMETEAVPSQKKTTSTSFQFNSKPKKSDSNLKNRGSTSSSKLRNLAEES
Sbjct: 121 MPLCICETSIQPMETEAVPSQKKTTSTSFQFNSKPKKSDSNLKNRGSTSSSKLRNLAEES 180

Query: 181 KIDYEASGEGLREAIKNGDTNAVKKLLSEGVDANYHDKQGLSLLHLAAVFNQTDIVFALI 240
           KIDYEASGEGLREAIKNGDTNAVKKLLSEGVDANYHDKQGLSLLHLAAVFNQTDIVFALI
Sbjct: 181 KIDYEASGEGLREAIKNGDTNAVKKLLSEGVDANYHDKQGLSLLHLAAVFNQTDIVFALI 240

Query: 241 ESGARLDYKNAQGETPLDCAPAALQYKIREKMEGQ 276
           ESGARLDYKNAQGETPLDCAPAALQYKIREKMEGQ
Sbjct: 241 ESGARLDYKNAQGETPLDCAPAALQYKIREKMEGQ 275

[Close]

BLAST of MS023173.1 vs. ExPASy TrEMBL
Match: A0A6J1D305 (uncharacterized protein LOC111016522 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016522 PE=4 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 1.3e-138
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0


Query: 1   MSAGPPLFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFGIHSPVRVC 60
           MSAGPPLFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFGIHSPVRVC
Sbjct: 1   MSAGPPLFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFGIHSPVRVC 60

Query: 61  ADCFNNSSQSRDVGQSPSLAVVDQVADTVSQLNLDADVNSESKPAVEHQPVLGISDCKCG 120
           ADCFNNSSQSRDVGQSPSLAVVDQVADTVSQLNLDADVNSESKPAVEHQPVLGISDCKCG
Sbjct: 61  ADCFNNSSQSRDVGQSPSLAVVDQVADTVSQLNLDADVNSESKPAVEHQPVLGISDCKCG 120

Query: 121 MPLCICETSIQPMETEAVPSQKKTTSTSFQFNSKPKKSDSNLKNRGSTSSSKLRNLAEES 180
           MPLCICETSIQPMETEAVPSQKKTTSTSFQFNSKPKKSDSNLKNRGSTSSSKLRNLAEES
Sbjct: 121 MPLCICETSIQPMETEAVPSQKKTTSTSFQFNSKPKKSDSNLKNRGSTSSSKLRNLAEES 180

Query: 181 KIDYEASGEGLREAIKNGDTNAVKKLLSEGVDANYHDKQGLSLLHLAAVFNQTDIVFALI 240
           KIDYEASGEGLREAIKNGDTNAVKKLLSEGVDANYHDKQGLSLLHLAAVFNQTDIVFALI
Sbjct: 181 KIDYEASGEGLREAIKNGDTNAVKKLLSEGVDANYHDKQGLSLLHLAAVFNQTDIVFALI 240

Query: 241 ESGARLDYKNAQ 253
           ESGARLDYKNAQ
Sbjct: 241 ESGARLDYKNAQ 252

[Close]

BLAST of MS023173.1 vs. ExPASy TrEMBL
Match: A0A5A7UKZ2 (Vacuolar protein sorting-associated protein 27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001170 PE=4 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.3e-135
Identity = 243/275 (88.36%), Postives = 257/275 (93.45%), Query Frame = 0


Query: 1   MSAGPPLFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFGIHSPVRVC 60
           MS  PP FQEAARC+VCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFGIHS VRVC
Sbjct: 1   MSVEPPPFQEAARCDVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFGIHSSVRVC 60

Query: 61  ADCFNNSSQSRDVGQSPSLAVVDQVADTVSQLNLDADVNSESKPAVEHQPVLGISDCKCG 120
           ADCFNNSSQS+ VGQ PSLAVVDQV DTVSQL+LD D+NSE KPAVEHQP LGI DCKCG
Sbjct: 61  ADCFNNSSQSKVVGQPPSLAVVDQVGDTVSQLSLDGDLNSEPKPAVEHQPALGIPDCKCG 120

Query: 121 MPLCICETSIQPMETEAVPSQKKTTSTSFQFNSKPKKSDSNLKNRGSTSSSKLRNLAEES 180
           MPLCICET  QPMETEAVPSQKKT STS Q+N KPKK+DSNL+NRGSTS+SKLRNLA+ES
Sbjct: 121 MPLCICETPAQPMETEAVPSQKKTASTSTQYNPKPKKTDSNLRNRGSTSNSKLRNLADES 180

Query: 181 KIDYEASGEGLREAIKNGDTNAVKKLLSEGVDANYHDKQGLSLLHLAAVFNQTDIVFALI 240
           +I+YEASGEGLREAIKNGDT AVKKLLSEGVDANYHDKQGLSLLH+AAVFNQTDIVFALI
Sbjct: 181 RINYEASGEGLREAIKNGDTIAVKKLLSEGVDANYHDKQGLSLLHVAAVFNQTDIVFALI 240

Query: 241 ESGARLDYKNAQGETPLDCAPAALQYKIREKMEGQ 276
           E+GA LDYKNAQGETPLDCAPA+LQYKIREKMEGQ
Sbjct: 241 ENGASLDYKNAQGETPLDCAPASLQYKIREKMEGQ 275

[Close]

BLAST of MS023173.1 vs. ExPASy TrEMBL
Match: A0A6J1H9N2 (vacuolar protein sorting-associated protein 27-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461389 PE=4 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 6.2e-133
Identity = 243/276 (88.04%), Postives = 256/276 (92.75%), Query Frame = 0


Query: 1   MSAGPPLFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFGIHSPVRVC 60
           MS  PP FQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFGI S VRVC
Sbjct: 1   MSVEPPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFGIQSSVRVC 60

Query: 61  ADCFNNSSQSRDVGQSPSLAVVDQVADTVSQLNLDADVNSESKPAVEHQPVLGISDCKCG 120
            DCFN SSQSR+VGQ PSLAVVDQVADTVS+LNLD DVNSE KPAVEHQP  GISDCKCG
Sbjct: 61  GDCFNVSSQSREVGQPPSLAVVDQVADTVSKLNLDGDVNSEPKPAVEHQPAFGISDCKCG 120

Query: 121 MPLCICETSIQPMETEAVPSQKKTTSTSFQFNSKPKKSDSNLKNRGSTSSSKLRNL-AEE 180
           MPLCICET +Q METEAVPSQKKT STS Q++SKPKK+DSNL+NRGSTS+SKLRNL A+E
Sbjct: 121 MPLCICETPVQSMETEAVPSQKKTASTSTQYSSKPKKTDSNLRNRGSTSNSKLRNLAADE 180

Query: 181 SKIDYEASGEGLREAIKNGDTNAVKKLLSEGVDANYHDKQGLSLLHLAAVFNQTDIVFAL 240
           S+I+YEASGEGLREAIKNGDT AVKKLLSEGVDANYHDKQGLSLLH+AAVFNQTDIVFAL
Sbjct: 181 SRINYEASGEGLREAIKNGDTIAVKKLLSEGVDANYHDKQGLSLLHVAAVFNQTDIVFAL 240

Query: 241 IESGARLDYKNAQGETPLDCAPAALQYKIREKMEGQ 276
           IESGA LDYKNAQGETPLDCAPA+LQYKIREKM GQ
Sbjct: 241 IESGASLDYKNAQGETPLDCAPASLQYKIREKMGGQ 276

[Close]

BLAST of MS023173.1 vs. ExPASy TrEMBL
Match: A0A0A0LWS8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G598850 PE=4 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 1.1e-132
Identity = 238/275 (86.55%), Postives = 253/275 (92.00%), Query Frame = 0


Query: 1   MSAGPPLFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFGIHSPVRVC 60
           MS  PP FQEAARC+VCKCSFNTFRRRHHCRCCGRTLC+EHSSFQMALPQFGIHS VRVC
Sbjct: 1   MSVDPPPFQEAARCDVCKCSFNTFRRRHHCRCCGRTLCNEHSSFQMALPQFGIHSSVRVC 60

Query: 61  ADCFNNSSQSRDVGQSPSLAVVDQVADTVSQLNLDADVNSESKPAVEHQPVLGISDCKCG 120
           ADCFNNSSQS+ VGQ PSLAVVDQV D VSQLNLD D+ SE KPAVEHQP LGI DCKCG
Sbjct: 61  ADCFNNSSQSKGVGQPPSLAVVDQVGDAVSQLNLDGDLTSEPKPAVEHQPALGIPDCKCG 120

Query: 121 MPLCICETSIQPMETEAVPSQKKTTSTSFQFNSKPKKSDSNLKNRGSTSSSKLRNLAEES 180
           MPLCICET  QPMETEAV SQKKT STS Q+NSKPKK+DSNL+NR STS+SKLRNLA+ES
Sbjct: 121 MPLCICETPAQPMETEAVSSQKKTASTSTQYNSKPKKTDSNLRNRASTSNSKLRNLADES 180

Query: 181 KIDYEASGEGLREAIKNGDTNAVKKLLSEGVDANYHDKQGLSLLHLAAVFNQTDIVFALI 240
           +I+YEASGEGLREA+KNGDT AVKKLLSEGVDANYHDKQGLSLLH+AAVFNQTDIVFALI
Sbjct: 181 RINYEASGEGLREAVKNGDTIAVKKLLSEGVDANYHDKQGLSLLHVAAVFNQTDIVFALI 240

Query: 241 ESGARLDYKNAQGETPLDCAPAALQYKIREKMEGQ 276
           E GA LDYKNAQGETP+DCAPA+LQYKIREKMEGQ
Sbjct: 241 EGGASLDYKNAQGETPMDCAPASLQYKIREKMEGQ 275

[Close]

BLAST of MS023173.1 vs. TAIR 10
Match: AT2G26210.1 (Ankyrin repeat family protein )

HSP 1 Score: 168.3 bits (425), Expect = 8.5e-42
Identity = 100/199 (50.25%), Postives = 132/199 (66.33%), Query Frame = 0


Query: 82  VDQVADTVSQLNLDADVNSESKPAVEHQPVLGIS---DCKCGMPLCICETSIQPMETEAV 141
           V+ + + VS+L++D           ++   LG S   +CKCGMPLCIC   + P ++   
Sbjct: 7   VNSLTEQVSRLDID-----------DNDMGLGGSETMECKCGMPLCIC---VAPPKSTDK 66

Query: 142 PSQKKTTSTSFQFNSKPKKSDSNLKNRGSTSSSKLRNL----AEESKIDYEASGEGLREA 201
           P+   T +          KS+++ K++GSTSSS  R+      +  + DYEASGEGLREA
Sbjct: 67  PNPPATIAPVV---LPQLKSEASAKSKGSTSSSNARSALNAGLDTPQRDYEASGEGLREA 126

Query: 202 IKNGDTNAVKKLLSEGVDANYHDKQGLSLLHLAAVFNQTDIVFALIESGARLDYKNAQGE 261
           IKNGD+   KKLL EGVDANY D+QG+S+LHLA +FNQTDI   L++ GA L+YKNAQGE
Sbjct: 127 IKNGDSAGAKKLLKEGVDANYRDRQGMSVLHLAVLFNQTDIALMLMDHGASLEYKNAQGE 186

Query: 262 TPLDCAPAALQYKIREKME 274
           TPLDCAPA LQYK+REKM+
Sbjct: 187 TPLDCAPATLQYKMREKMK 188

[Close]

BLAST of MS023173.1 vs. TAIR 10
Match: AT2G26210.2 (Ankyrin repeat family protein )

HSP 1 Score: 168.3 bits (425), Expect = 8.5e-42
Identity = 92/162 (56.79%), Postives = 116/162 (71.60%), Query Frame = 0


Query: 116 DCKCGMPLCICETSIQPMETEAVPSQKKTTSTSFQFNSKPKKSDSNLKNRGSTSSSKLRN 175
           +CKCGMPLCIC   + P ++   P+   T +          KS+++ K++GSTSSS  R+
Sbjct: 10  ECKCGMPLCIC---VAPPKSTDKPNPPATIAPVV---LPQLKSEASAKSKGSTSSSNARS 69

Query: 176 L----AEESKIDYEASGEGLREAIKNGDTNAVKKLLSEGVDANYHDKQGLSLLHLAAVFN 235
                 +  + DYEASGEGLREAIKNGD+   KKLL EGVDANY D+QG+S+LHLA +FN
Sbjct: 70  ALNAGLDTPQRDYEASGEGLREAIKNGDSAGAKKLLKEGVDANYRDRQGMSVLHLAVLFN 129

Query: 236 QTDIVFALIESGARLDYKNAQGETPLDCAPAALQYKIREKME 274
           QTDI   L++ GA L+YKNAQGETPLDCAPA LQYK+REKM+
Sbjct: 130 QTDIALMLMDHGASLEYKNAQGETPLDCAPATLQYKMREKMK 165

[Close]

BLAST of MS023173.1 vs. TAIR 10
Match: AT2G26210.3 (Ankyrin repeat family protein )

HSP 1 Score: 168.3 bits (425), Expect = 8.5e-42
Identity = 92/162 (56.79%), Postives = 116/162 (71.60%), Query Frame = 0


Query: 116 DCKCGMPLCICETSIQPMETEAVPSQKKTTSTSFQFNSKPKKSDSNLKNRGSTSSSKLRN 175
           +CKCGMPLCIC   + P ++   P+   T +          KS+++ K++GSTSSS  R+
Sbjct: 10  ECKCGMPLCIC---VAPPKSTDKPNPPATIAPVV---LPQLKSEASAKSKGSTSSSNARS 69

Query: 176 L----AEESKIDYEASGEGLREAIKNGDTNAVKKLLSEGVDANYHDKQGLSLLHLAAVFN 235
                 +  + DYEASGEGLREAIKNGD+   KKLL EGVDANY D+QG+S+LHLA +FN
Sbjct: 70  ALNAGLDTPQRDYEASGEGLREAIKNGDSAGAKKLLKEGVDANYRDRQGMSVLHLAVLFN 129

Query: 236 QTDIVFALIESGARLDYKNAQGETPLDCAPAALQYKIREKME 274
           QTDI   L++ GA L+YKNAQGETPLDCAPA LQYK+REKM+
Sbjct: 130 QTDIALMLMDHGASLEYKNAQGETPLDCAPATLQYKMREKMK 165

[Close]

BLAST of MS023173.1 vs. TAIR 10
Match: AT3G58760.1 (Integrin-linked protein kinase family )

HSP 1 Score: 51.6 bits (122), Expect = 1.2e-06
Identity = 23/60 (38.33%), Postives = 36/60 (60.00%), Query Frame = 0


Query: 198 GDTNAVKKLLSEGVDANYHDKQGLSLLHLAAVFNQTDIVFALIESGARLDYKNAQGETPL 257
           GD + + K+L  G + +Y D    + LH+AA   +TD+V  L+  GA++D K+  G TPL
Sbjct: 60  GDIDGINKMLDSGTNVDYRDIDARTALHVAACQGRTDVVELLLSRGAKVDTKDRWGSTPL 119

[Close]

BLAST of MS023173.1 vs. TAIR 10
Match: AT4G18950.1 (Integrin-linked protein kinase family )

HSP 1 Score: 49.3 bits (116), Expect = 5.8e-06
Identity = 25/69 (36.23%), Postives = 36/69 (52.17%), Query Frame = 0


Query: 188 GEGLREAIKNGDTNAVKKLLSEGVDANYHDKQGLSLLHLAAVFNQTDIVFALIESGARLD 247
           G  L      GD   +K+L+  G+DANY D    + LH+AA     D+V  L++  A +D
Sbjct: 44  GVRLMYLANEGDIEGIKELIDSGIDANYRDIDDRTALHVAACQGLKDVVELLLDRKAEVD 103

Query: 248 YKNAQGETP 257
            K+  G TP
Sbjct: 104 PKDRWGSTP 112

The following BLAST results are available for this feature:

BLAST of MS023173.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147653.1	1.1e-152	100.00	vacuolar protein sorting-associated protein 27 isoform X2 [Momordica charantia]	[more]
XP_022147651.1	2.7e-138	100.00	uncharacterized protein LOC111016522 isoform X1 [Momordica charantia]	[more]
KAA0055738.1	4.7e-135	88.36	vacuolar protein sorting-associated protein 27 [Cucumis melo var. makuwa] >TYK09...	[more]
XP_038878461.1	2.3e-134	89.05	vacuolar protein sorting-associated protein 27 [Benincasa hispida]	[more]
XP_023516961.1	3.4e-133	88.41	vacuolar protein sorting-associated protein 27-like isoform X1 [Cucurbita pepo s...	[more]

BLAST of MS023173.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q755J9	5.8e-11	43.75	Vacuolar protein sorting-associated protein 27 OS=Ashbya gossypii (strain ATCC 1...	[more]
P40343	2.2e-10	41.43	Vacuolar protein sorting-associated protein 27 OS=Saccharomyces cerevisiae (stra...	[more]
B4G2G5	1.4e-09	41.67	Lateral signaling target protein 2 homolog OS=Drosophila persimilis OX=7234 GN=G...	[more]
Q17AN2	1.9e-09	50.91	Lateral signaling target protein 2 homolog OS=Aedes aegypti OX=7159 GN=AAEL00524...	[more]
Q6FQJ1	1.9e-09	30.33	Vacuolar protein sorting-associated protein 27 OS=Candida glabrata (strain ATCC ...	[more]

BLAST of MS023173.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D1W6	5.4e-153	100.00	vacuolar protein sorting-associated protein 27 isoform X2 OS=Momordica charantia...	[more]
A0A6J1D305	1.3e-138	100.00	uncharacterized protein LOC111016522 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A5A7UKZ2	2.3e-135	88.36	Vacuolar protein sorting-associated protein 27 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A6J1H9N2	6.2e-133	88.04	vacuolar protein sorting-associated protein 27-like isoform X1 OS=Cucurbita mosc...	[more]
A0A0A0LWS8	1.1e-132	86.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G598850 PE=4 SV=1	[more]

BLAST of MS023173.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G26210.1	8.5e-42	50.25	Ankyrin repeat family protein	[more]
AT2G26210.2	8.5e-42	56.79	Ankyrin repeat family protein	[more]
AT2G26210.3	8.5e-42	56.79	Ankyrin repeat family protein	[more]
AT3G58760.1	1.2e-06	38.33	Integrin-linked protein kinase family	[more]
AT4G18950.1	5.8e-06	36.23	Integrin-linked protein kinase family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000306	FYVE zinc finger	SMART	SM00064	fyve_4	coord: 1..69 e-value: 6.3E-16 score: 68.9
IPR000306	FYVE zinc finger	PFAM	PF01363	FYVE	coord: 9..67 e-value: 1.1E-13 score: 51.1
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 186..215 e-value: 1100.0 score: 4.6 coord: 219..248 e-value: 0.043 score: 22.9
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 219..251 score: 11.40734
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 193..260 e-value: 1.5E-8 score: 35.1
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 166..268 e-value: 2.7E-19 score: 71.0
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 192..261
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 3..70 e-value: 3.0E-18 score: 67.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..174
None	No IPR available	PANTHER	PTHR47794	VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 27	coord: 2..273
None	No IPR available	PROSITE	PS50297	ANK_REP_REGION	coord: 219..250 score: 10.205854
None	No IPR available	CDD	cd15760	FYVE_scVPS27p_like	coord: 8..64 e-value: 2.5212E-23 score: 88.1227
IPR017455	Zinc finger, FYVE-related	PROSITE	PS50178	ZF_FYVE	coord: 8..68 score: 11.84715
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	57903	FYVE/PHD zinc finger	coord: 10..74

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS023173	MS023173	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS023173.1-cds	MS023173.1-cds-scaffold78:672539..672606	CDS
MS023173.1-cds	MS023173.1-cds-scaffold78:673830..673908	CDS
MS023173.1-cds	MS023173.1-cds-scaffold78:674011..674061	CDS
MS023173.1-cds	MS023173.1-cds-scaffold78:674127..674186	CDS
MS023173.1-cds	MS023173.1-cds-scaffold78:674277..674322	CDS
MS023173.1-cds	MS023173.1-cds-scaffold78:674577..674674	CDS
MS023173.1-cds	MS023173.1-cds-scaffold78:674753..674969	CDS
MS023173.1-cds	MS023173.1-cds-scaffold78:675480..675547	CDS
MS023173.1-cds	MS023173.1-cds-scaffold78:675647..675703	CDS
MS023173.1-cds	MS023173.1-cds-scaffold78:675809..675889	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS023173.1	MS023173.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding