MS022492.1 (mRNA) Bitter gourd (TR) v1

Overview
NameMS022492.1
TypemRNA
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionThioredoxin
Locationscaffold720: 2880 .. 6390 (+)
Sequence length576
RNA-Seq ExpressionMS022492.1
SyntenyMS022492.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAAGAAATCTCGTCGCGCGGTGGCGCGTACTCCGACGTGTTCTCGACGACGGCCGACGGCTAGGTTCATGTTATCGAAATTATTCCGTTCTTAATCGCTCTGAAACAATTATTGGAAGTAGGTCATCGTCTTCGTTGCCAAAGTTGCCCTTCAGCTCCTCCTCTTCCAACGCGCCGGACTTTCATTTCCCGACTCCGTCTTTCCAGCACCGTCGACCGATATGCTCAGCGTCAGGTTCTGCATTTCTCATCTTTCCCCATTTTTTCCCTCTTTAAGCGCCGTCTGGAACTGCGATTCTTTGTTACTTCTGAATTCTGAGAATGTTGTATTTATTGTGTTCGTCTACTATGTATGTATATATACTGTACATAGGCGTTACTGTTGGTTAAGCAGTTAGAAAATTTGGAGTATAATATGTACTTATTGATTCTCATGGTGAATTGCTCAGTAAAGGAGCCAGAGCCAGTGGACGTAGGTTTTTATTTATCAAACCTTCATAAATCTTTCTCGTTTTGCTTTCGTCTGGAGCGTGAGACTTGAATACTGCTACTTTTTATTTGTATTTTACGGTTCAACGACTGTAATTATGTGTGATACGGTTCTTTTCTTTTCTTTTTTTTTTTGTTTGAAAGAAACAATTTTATTGATGTATGAAATTACAAACCCATGAGAGGGTATACAAAAGCCCATAGATGGGTTACATAAGGTACTTGTAGCTATAGTAATGAAAAGTAGGAGGGGTTTTACATCAAGAGATAGCTTTATACACTATAGCATCAAAAAAACGGTCAAAGGATTGTGTCTTGTTATTGAAGGTCCTTTGATTTCGTTCACCCCAAGTAGTCCAAAGAAAAGCTCGAATGAAATTTGTCCATAGCTGTTCCTTTTCGTTCTTGAAGGGGTGTCCGTTTAGGGTGGCCTCAAGGAGAAGTTGGGGGTCGTTAGGCAAAGCTGTGGACCAACCAAAAGTACTGAGAATATCCTTCCAAAAATCAGAAGCAAAGGTGCAGGCGGTAAAGAGATGCTGTTGGGATTCCAAACTGTTTTTGCAAATGATACACCACTGTGGAGAAATAGCCATGTAGGGGAGTCTTCTTTGTAACTTATCATTGGTATTGATGACACAGTGACTAAGCTACCAAAGAAAGAAGTTCACTTTTATTGGGCACTTGGCCTTCCAGATAGTGTTTTAGAGGCTGTTTTGGGACACTTTGTTGCTGTGTGCGAGGTCCTTTGTGAGGGAGCTGGTGGAAAAAGATCCATTTGCTTCTAGCGGTTCTTCTCAATTAGGCATTAGCTATGAATTATGTACTTCTTCGTCAACGACCTTACAACATGTGATAATATTTGATGGTTTAATATTATGATTTCAGATCCTTCGAACATTGTCTTGATAACGTCTGAAGATCAATTCAACAAGGCACTTAGAAAAGCACGAGGTATAACCCCTTTAGCAACATCATTTTCATAAAAAATTTCTTGCTTTGCCTTTTCAGATGCTTAATACTGCTGGATATTTTGTTTCCTGGCCAAAACCTCACTGTAGATGAAGCTTTGCCTGCAATTTTCTATTTCACTGCTGCCTGGTGTGGTCCTTGTGAGTTTCAAATCAATTTTACATTTGGCGACTTTATTTGTTTTGGTCTAAATTTGTTTCCATACTCCTGGAGTTTTTTCTTTTGAATGATATAAATATACGGCTCTTAATCTGTTTTATTTCTACATTTGCAGGCAGATTAGTATCTCCTGTGATTAAAGAATTGAGTAAGGACCACCCTCAAGTGACAACATATAAAATTGACATTGACCAGGTAGGTAGACAATGTTATGGGGTTGGTAGTTTTTATTTCTTTCTTTTTCTTTTCCCAATGTTAAACCGGCTTTCCTTAAATTGTGTCACCTTCATTTGAATGATTACCCAACTGATTATCCAGGTTTATTGTGTTTCGTTAGACTTGTTTGATTTACTGGTTATATGTTTTAAGTTCTGATCTTGTGAAAAATCCAACTGATTGTTTACGCTAACGGTCATGAGAAAAGAGATCATAGATAGGTTAGCACTAATCTTCAAATTTCATAAACGGAAAAGTCTTTGTTTGGTCCTGCTTACATGGGATGGGAAGATCAACACTCGTCCAAATTCAAAGGAAAAACTCCAATTTAACCTTATACCTGAACTGGTGCAGCCCATGCAATAAGAACAGTGAGGATGAATAGCACCTTCTGTATTGTGAGCTTTTGAAGGGAGATCAAGGGGAATTTTTGATTTGGTATAATTGGAGAACAATTTGGAATTTCTGCAATGCCTGTTAGGTCATGGCTTGAAGGGCAATTCAAAATTTTTGTAAATTAATGCATGCTGCGGATCTGTGTGGATGATTTGGTTGGAGAGGAAGAGGACGTTTTTGAGGATCCATATAAAGGACATTTTAGTTGGAAAGGACACCATTTTCTTGCTACCTTTTAGATGAAGTTCCTATTCAATATTTTTTTTAATGCACAATTATTCTCCTCTTACCATCCCTGCTTCGTACAAAATATGAACCGTTTCACACGTATTTTTGCGTAGTTGTTTCTCCATATGCACTCGTGCTTAATGCTTTATTTCTCCAAAACAGCATTCATGCTGCAGCTGCCTTATGATTAATGTCGATCATGTCTTCATCTTCTCATTCACTGAAAATTGGTTGTAATAAAATTCTTATTCCTTTTACAGGAGGGCCTTGTAAGAACTTTGAACGAGTTAAATATTACCTCTGTGGTAAGTGTCTCGGCTCTTGTAATTTGCTACAACCCTGTTATAACTTATAAGTTTCGTGAATTGCTCCGTTCAGCAAGCATTTTCATTTTTGTGCGTAATTTCGACTGTATTATTGGATGCTTTCTTATTTCATGTTTTCTTATAAGTTTCGTGAATTGCTCCGTTGATCATAAAATTTTGCAAAGGGGGCTGAGTTTCTATTTGAGTCCCCTTTGCAAAATTTTATGATCTTATGTGATTATACATGGTCCTTGTCTTTGATGTCTATGAATGTTGAGTGCCTGGTATCTGTGATAGGTTATTTTAAACCGCCTCCCATTATGAATGCAGTTTTATATTAAAGCCTAAAAGGTTTTAGTTCGTCGCAATCTCAACCCTGAAATTATTTTGTGAACCCTTGCTTTTCTTGTCATGGAGAAAACAAACTATTTTCAATATGAAAGCAAGGTCTAAACTTAAACTAGAAGTTTCCAATCCAACTGATAGATTAACATAAAGGAGCCTTGAAACTAATTTACAAGTGTTGGAAGCATTTGAGTAAGGAATACAAACACACACATCATTCTACAAATGAGCTCATTTCTAAGCAAAATGAGTGAAGTGTGATGATGAGTTTAAAAGTTTATGCTGATTTTTGTGTTGGGCAACAGCCGACATTTCATTTCTTTCAGAGTGGAAAAAAGGGTGGGGAGATAATCGGTGCAGATGTTGCAGGCATCAAGAATATCGTGGAGAAGCTTTACAAA

mRNA sequence

ATGGTAAGAAATCTCGTCGCGCGGTGGCGCGTACTCCGACGTGTTCTCGACGACGGCCGACGGCTAGGTTCATGTTATCGAAATTATTCCGTTCTTAATCGCTCTGAAACAATTATTGGAAGTAGGTCATCGTCTTCGTTGCCAAAGTTGCCCTTCAGCTCCTCCTCTTCCAACGCGCCGGACTTTCATTTCCCGACTCCGTCTTTCCAGCACCGTCGACCGATATGCTCAGCGTCAGATCCTTCGAACATTGTCTTGATAACGTCTGAAGATCAATTCAACAAGGCACTTAGAAAAGCACGAGATGAAGCTTTGCCTGCAATTTTCTATTTCACTGCTGCCTGGTGTGGTCCTTGTGAATTAGTATCTCCTGTGATTAAAGAATTGAGTAAGGACCACCCTCAAGTGACAACATATAAAATTGACATTGACCAGGAGGGCCTTGTAAGAACTTTGAACGAGTTAAATATTACCTCTGTGCCGACATTTCATTTCTTTCAGAGTGGAAAAAAGGGTGGGGAGATAATCGGTGCAGATGTTGCAGGCATCAAGAATATCGTGGAGAAGCTTTACAAA

Coding sequence (CDS)

ATGGTAAGAAATCTCGTCGCGCGGTGGCGCGTACTCCGACGTGTTCTCGACGACGGCCGACGGCTAGGTTCATGTTATCGAAATTATTCCGTTCTTAATCGCTCTGAAACAATTATTGGAAGTAGGTCATCGTCTTCGTTGCCAAAGTTGCCCTTCAGCTCCTCCTCTTCCAACGCGCCGGACTTTCATTTCCCGACTCCGTCTTTCCAGCACCGTCGACCGATATGCTCAGCGTCAGATCCTTCGAACATTGTCTTGATAACGTCTGAAGATCAATTCAACAAGGCACTTAGAAAAGCACGAGATGAAGCTTTGCCTGCAATTTTCTATTTCACTGCTGCCTGGTGTGGTCCTTGTGAATTAGTATCTCCTGTGATTAAAGAATTGAGTAAGGACCACCCTCAAGTGACAACATATAAAATTGACATTGACCAGGAGGGCCTTGTAAGAACTTTGAACGAGTTAAATATTACCTCTGTGCCGACATTTCATTTCTTTCAGAGTGGAAAAAAGGGTGGGGAGATAATCGGTGCAGATGTTGCAGGCATCAAGAATATCGTGGAGAAGCTTTACAAA

Protein sequence

MVRNLVARWRVLRRVLDDGRRLGSCYRNYSVLNRSETIIGSRSSSSLPKLPFSSSSSNAPDFHFPTPSFQHRRPICSASDPSNIVLITSEDQFNKALRKARDEALPAIFYFTAAWCGPCELVSPVIKELSKDHPQVTTYKIDIDQEGLVRTLNELNITSVPTFHFFQSGKKGGEIIGADVAGIKNIVEKLYK
Homology
BLAST of MS022492.1 vs. NCBI nr
Match: XP_022146703.1 (thioredoxin O2, mitochondrial-like [Momordica charantia])

HSP 1 Score: 384.8 bits (987), Expect = 4.4e-103
Identity = 190/192 (98.96%), Postives = 190/192 (98.96%), Query Frame = 0

Query: 1   MVRNLVARWRVLRRVLDDGRRLGSCYRNYSVLNRSETIIGSRSSSSLPKLPFSSSSSNAP 60
           MVRNLVARWRVLRRVLDDGRRLGSCYRNYSVLNRSETIIGSRSSSSLPKLPFSSSSSNAP
Sbjct: 1   MVRNLVARWRVLRRVLDDGRRLGSCYRNYSVLNRSETIIGSRSSSSLPKLPFSSSSSNAP 60

Query: 61  DFHFPTPSFQHRRPICSASDPSNIVLITSEDQFNKALRKARDEALPAIFYFTAAWCGPCE 120
           DFHFPTPSFQHRRPICSASDPSNIVLITSEDQFNKALRKARDEALPAIFYFTAAWCGPC 
Sbjct: 61  DFHFPTPSFQHRRPICSASDPSNIVLITSEDQFNKALRKARDEALPAIFYFTAAWCGPCR 120

Query: 121 LVSPVIKELSKDHPQVTTYKIDIDQEGLVRTLNELNITSVPTFHFFQSGKKGGEIIGADV 180
           LVSPVIKELSKDHPQVTTYKIDIDQEGLVRTLNELNITSVPTFHFFQSGKK GEIIGADV
Sbjct: 121 LVSPVIKELSKDHPQVTTYKIDIDQEGLVRTLNELNITSVPTFHFFQSGKKAGEIIGADV 180

Query: 181 AGIKNIVEKLYK 193
           AGIKNIVEKLYK
Sbjct: 181 AGIKNIVEKLYK 192

BLAST of MS022492.1 vs. NCBI nr
Match: XP_023545000.1 (thioredoxin O2, mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 294.3 bits (752), Expect = 7.7e-76
Identity = 144/192 (75.00%), Postives = 161/192 (83.85%), Query Frame = 0

Query: 1   MVRNLVARWRVLRRVLDDGRRLGSCYRNYSVLNRSETIIGSRSSSSLPKLPFSSSSSNAP 60
           M RN++A WR+LRR LD GR LG CYRNYS+ +RSE ++GS SSSS    P   S  +AP
Sbjct: 1   MGRNIIAHWRLLRRALDHGRWLGPCYRNYSIFSRSEILLGSSSSSSFSAAP---SHRSAP 60

Query: 61  DFHFPTPSFQHRRPICSASDPSNIVLITSEDQFNKALRKARDEALPAIFYFTAAWCGPCE 120
           DF  P   FQH RP+CSASDPSNI++I SEDQF K+L KA+DEALPAIFYFTAAWCGPC 
Sbjct: 61  DFQSPRLPFQHCRPLCSASDPSNIIMIKSEDQFKKSLGKAQDEALPAIFYFTAAWCGPCR 120

Query: 121 LVSPVIKELSKDHPQVTTYKIDIDQEGLVRTLNELNITSVPTFHFFQSGKKGGEIIGADV 180
           L+SPVIKELSK+HPQVTTYKIDIDQEGL RTLN+LNITSVPT HFFQSGKK GEIIGADV
Sbjct: 121 LLSPVIKELSKNHPQVTTYKIDIDQEGLERTLNDLNITSVPTLHFFQSGKKAGEIIGADV 180

Query: 181 AGIKNIVEKLYK 193
           AGIKNI+EKLYK
Sbjct: 181 AGIKNIMEKLYK 189

BLAST of MS022492.1 vs. NCBI nr
Match: XP_022978794.1 (thioredoxin O2, mitochondrial-like isoform X1 [Cucurbita maxima] >XP_022978795.1 thioredoxin O2, mitochondrial-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 291.2 bits (744), Expect = 6.5e-75
Identity = 142/192 (73.96%), Postives = 160/192 (83.33%), Query Frame = 0

Query: 1   MVRNLVARWRVLRRVLDDGRRLGSCYRNYSVLNRSETIIGSRSSSSLPKLPFSSSSSNAP 60
           M  N++A+WR+LRR LD GR LG CYRNYS+ +RSE ++GS SSSS    P   S  +AP
Sbjct: 1   MGTNIIAQWRLLRRALDHGRWLGPCYRNYSIFSRSEILLGSSSSSSFSAAP---SHRSAP 60

Query: 61  DFHFPTPSFQHRRPICSASDPSNIVLITSEDQFNKALRKARDEALPAIFYFTAAWCGPCE 120
           DF  PT  FQH RP+CSASDPSNI++I SEDQF K+L KA+DEA PAIFYFTAAWCGPC 
Sbjct: 61  DFQSPTLPFQHCRPLCSASDPSNIIMIKSEDQFKKSLGKAQDEAFPAIFYFTAAWCGPCR 120

Query: 121 LVSPVIKELSKDHPQVTTYKIDIDQEGLVRTLNELNITSVPTFHFFQSGKKGGEIIGADV 180
           L+SPVIKELSK+HPQVTTYKIDIDQEGL R LN+LNITSVPT HFFQSGKK GEIIGADV
Sbjct: 121 LLSPVIKELSKNHPQVTTYKIDIDQEGLERALNDLNITSVPTLHFFQSGKKAGEIIGADV 180

Query: 181 AGIKNIVEKLYK 193
           AGIKNI+EKLYK
Sbjct: 181 AGIKNIMEKLYK 189

BLAST of MS022492.1 vs. NCBI nr
Match: XP_038883351.1 (thioredoxin O2, mitochondrial [Benincasa hispida])

HSP 1 Score: 290.4 bits (742), Expect = 1.1e-74
Identity = 147/197 (74.62%), Postives = 165/197 (83.76%), Query Frame = 0

Query: 1   MVRNLVARWRVLRRVLDDGRRLGSCYRNYSVLNRSETIIG--SRSSSSLPKLPFSSSS-- 60
           M RN+VA+WR+LRRVLDDG R G  YRNYS+ +RS T +G  S SSSSLPK  FSSS   
Sbjct: 1   MGRNIVAQWRLLRRVLDDGWRRGPRYRNYSIFSRSGTPLGSWSSSSSSLPKFLFSSSGPS 60

Query: 61  -SNAPDFHFPTPSFQHRRPICSASDPSNIVLITSEDQFNKALRKARDEALPAIFYFTAAW 120
             + PDFH P+  FQH R +CSASDPSNI+LI SEDQFNK+L KA+DEALPAIFYFTAAW
Sbjct: 61  LRDVPDFHSPSVHFQHCRSLCSASDPSNIILIKSEDQFNKSLSKAQDEALPAIFYFTAAW 120

Query: 121 CGPCELVSPVIKELSKDHPQVTTYKIDIDQEGLVRTLNELNITSVPTFHFFQSGKKGGEI 180
           CGPC L++PVIKELSK+HPQVTTYKIDIDQEGL RTLN LNITSVPT  FFQSGKK GEI
Sbjct: 121 CGPCRLLAPVIKELSKNHPQVTTYKIDIDQEGLERTLNNLNITSVPTLQFFQSGKKAGEI 180

Query: 181 IGADVAGIKNIVEKLYK 193
           +GADVAGIKN++EKLYK
Sbjct: 181 VGADVAGIKNMMEKLYK 197

BLAST of MS022492.1 vs. NCBI nr
Match: XP_022926066.1 (thioredoxin O1, mitochondrial-like isoform X1 [Cucurbita moschata] >XP_022926067.1 thioredoxin O1, mitochondrial-like isoform X1 [Cucurbita moschata] >KAG6581512.1 Thioredoxin O1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 287.7 bits (735), Expect = 7.2e-74
Identity = 140/192 (72.92%), Postives = 162/192 (84.38%), Query Frame = 0

Query: 1   MVRNLVARWRVLRRVLDDGRRLGSCYRNYSVLNRSETIIGSRSSSSLPKLPFSSSSSNAP 60
           M RN+++ WR+LRR LD GR LG CYRNYS+ +RSE ++GS SSSS      + S  +AP
Sbjct: 1   MGRNIISHWRLLRRALDHGRWLGPCYRNYSIFSRSEILLGSSSSSS--SFSAAPSHRSAP 60

Query: 61  DFHFPTPSFQHRRPICSASDPSNIVLITSEDQFNKALRKARDEALPAIFYFTAAWCGPCE 120
           DF  P+  F+H RP+CSASDPSNI++I SEDQF K+L KA+DEALPAIFYFTAAWCGPC 
Sbjct: 61  DFQSPSLPFRHCRPLCSASDPSNIIMIKSEDQFKKSLGKAQDEALPAIFYFTAAWCGPCR 120

Query: 121 LVSPVIKELSKDHPQVTTYKIDIDQEGLVRTLNELNITSVPTFHFFQSGKKGGEIIGADV 180
           L+SPVIKELSK+HPQVTTYKIDIDQEGL RTL++LNITSVPT HFFQSGKK GEIIGADV
Sbjct: 121 LLSPVIKELSKNHPQVTTYKIDIDQEGLERTLSDLNITSVPTLHFFQSGKKAGEIIGADV 180

Query: 181 AGIKNIVEKLYK 193
           AGIKNI+EKLYK
Sbjct: 181 AGIKNIMEKLYK 190

BLAST of MS022492.1 vs. ExPASy Swiss-Prot
Match: O64764 (Thioredoxin O1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g35010 PE=1 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.6e-42
Identity = 90/193 (46.63%), Postives = 129/193 (66.84%), Query Frame = 0

Query: 9   WRVLRRVLDDGRRLGSCYRNYSVLNRSET-----IIGSRSSSSL---PKLPFSSSSSNAP 68
           W ++R+VL    R  S  R+ +  +R  T     ++   S SSL     L  +S+   + 
Sbjct: 5   WSIVRKVL---HRQFSTLRSSTPSSRLSTSIRPLVLAPNSISSLIARNSLFTASNIGPSI 64

Query: 69  DFHFPTPSFQHRRPICS-ASDPSNIVLITSEDQFNKALRKARDEALPAIFYFTAAWCGPC 128
           DF+F   S  HRR +CS A   + +VL+ SE++F  A+ KA+D +LP++FYFTAAWCGPC
Sbjct: 65  DFNFSNTSLPHRRSLCSEAGGENGVVLVKSEEEFINAMSKAQDGSLPSVFYFTAAWCGPC 124

Query: 129 ELVSPVIKELSKDHPQVTTYKIDIDQEGLVRTLNELNITSVPTFHFFQSGKKGGEIIGAD 188
             +SPVI ELSK +P VTTYK+DID+ G+  T+++LNIT+VPT HFF+ G K GE++GAD
Sbjct: 125 RFISPVIVELSKQYPDVTTYKVDIDEGGISNTISKLNITAVPTLHFFKGGSKKGEVVGAD 184

Query: 189 VAGIKNIVEKLYK 193
           V  +KN++E+LYK
Sbjct: 185 VTKLKNLMEQLYK 194

BLAST of MS022492.1 vs. ExPASy Swiss-Prot
Match: Q93VQ9 (Thioredoxin O2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g31020 PE=1 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.9e-37
Identity = 71/133 (53.38%), Postives = 97/133 (72.93%), Query Frame = 0

Query: 61  DFHFPTPSFQHRRPICSA-SDPSNIVLITSEDQFNKALRKARDEALPAIFYFTAAWCGPC 120
           +F+F   S  +RR  C A  D S+ V++ SE +FN AL KARD +LP++FYFTAAWCGPC
Sbjct: 27  EFNFLNTSLLNRRSFCFAEGDRSSFVVLKSEAEFNSALSKARDGSLPSVFYFTAAWCGPC 86

Query: 121 ELVSPVIKELSKDHPQVTTYKIDIDQEGLVRTLNELNITSVPTFHFFQSGKKGGEIIGAD 180
            L+SPVI ELS  +P VTTYK+DID+ GL   + +LN+++VPT  FF+ G K  EI+G D
Sbjct: 87  RLISPVILELSNKYPDVTTYKVDIDEGGLSNAIGKLNVSAVPTLQFFKGGVKKAEIVGVD 146

Query: 181 VAGIKNIVEKLYK 193
           V  +K+++E+LYK
Sbjct: 147 VVRLKSVMEQLYK 159

BLAST of MS022492.1 vs. ExPASy Swiss-Prot
Match: Q655X0 (Thioredoxin O, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0665900 PE=2 SV=2)

HSP 1 Score: 127.5 bits (319), Expect = 1.6e-28
Identity = 60/157 (38.22%), Postives = 96/157 (61.15%), Query Frame = 0

Query: 39  IGSRSSSSLPKLPFSSSSSNAPDFHFPTPSFQHRRPIC---SASDPSNIVLITSEDQFNK 98
           + + +++S P LP   S +  P    P P     R      S+S  S++V++ S + F  
Sbjct: 16  LAAAAAASKPYLPGKPSPAPPPPLSSPPPFPSLSRLFSTTPSSSGDSSMVVVGSAESFTS 75

Query: 99  ALRKARDEALPAIFYFTAAWCGPCELVSPVIKELSKDHPQVTTYKIDIDQEGLVRTLNEL 158
            + K   E LPA+FY+TA WCGPC  ++PVI +LS  +P++  YK+DID +G+   L++L
Sbjct: 76  IMSKVEAEKLPAVFYYTAVWCGPCRAMAPVISKLSSRYPKIPIYKVDIDMDGVGSKLSDL 135

Query: 159 NITSVPTFHFFQSGKKGGEIIGADVAGIKNIVEKLYK 193
            I SVPTFHF+  G+K GE++GA+   +++ +E L+K
Sbjct: 136 KIFSVPTFHFYYQGRKTGEVVGANATKLESTMESLHK 172

BLAST of MS022492.1 vs. ExPASy Swiss-Prot
Match: Q6ES52 (TPR repeat-containing thioredoxin TDX OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0401200 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 7.2e-16
Identity = 41/121 (33.88%), Postives = 68/121 (56.20%), Query Frame = 0

Query: 70  QHRRPICSAS---DPSNIVLITSEDQFNKALRKARDEALPAIFYFTAAWCGPCELVSPVI 129
           +H   + +AS      +++ I S  + +  L+ A   +   + YFTAAWCGPC  + PV 
Sbjct: 193 KHAEEVSAASAALKDGDVIAIHSSSELDTKLKAASSLSRLVVLYFTAAWCGPCRFIGPVC 252

Query: 130 KELSKDHPQVTTYKIDIDQEGLVRTLNELNITSVPTFHFFQSGKKGGEIIGADVAGIKNI 188
           K L++ H  V   K+DID+  L       N++SVP+F F ++GK+  +++GAD  G++  
Sbjct: 253 KSLAEKHRNVVFLKVDIDE--LNSVAYRWNVSSVPSFFFVRNGKEIDKVVGADKNGLERK 311

BLAST of MS022492.1 vs. ExPASy Swiss-Prot
Match: P80028 (Thioredoxin H-type OS=Chlamydomonas reinhardtii OX=3055 GN=TRXH PE=1 SV=3)

HSP 1 Score: 81.3 bits (199), Expect = 1.3e-14
Identity = 35/108 (32.41%), Postives = 65/108 (60.19%), Query Frame = 0

Query: 83  NIVLITSEDQFNKALRKARDEALPAIFYFTAAWCGPCELVSPVIKELSKDHP-QVTTYKI 142
           ++++I S+  ++  L K ++E  P +  FTA WCGPC++++P+ + LS D+  +V   K+
Sbjct: 4   SVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKV 63

Query: 143 DIDQEGLVRTLNELNITSVPTFHFFQSGKKGGEIIGADVAGIKNIVEK 190
           D+D   +        IT++PTFH ++ G K  +++GA    +K +V K
Sbjct: 64  DVD--AVAAVAEAAGITAMPTFHVYKDGVKADDLVGASQDKLKALVAK 109

BLAST of MS022492.1 vs. ExPASy TrEMBL
Match: A0A6J1CZ91 (thioredoxin O2, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111015843 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.1e-103
Identity = 190/192 (98.96%), Postives = 190/192 (98.96%), Query Frame = 0

Query: 1   MVRNLVARWRVLRRVLDDGRRLGSCYRNYSVLNRSETIIGSRSSSSLPKLPFSSSSSNAP 60
           MVRNLVARWRVLRRVLDDGRRLGSCYRNYSVLNRSETIIGSRSSSSLPKLPFSSSSSNAP
Sbjct: 1   MVRNLVARWRVLRRVLDDGRRLGSCYRNYSVLNRSETIIGSRSSSSLPKLPFSSSSSNAP 60

Query: 61  DFHFPTPSFQHRRPICSASDPSNIVLITSEDQFNKALRKARDEALPAIFYFTAAWCGPCE 120
           DFHFPTPSFQHRRPICSASDPSNIVLITSEDQFNKALRKARDEALPAIFYFTAAWCGPC 
Sbjct: 61  DFHFPTPSFQHRRPICSASDPSNIVLITSEDQFNKALRKARDEALPAIFYFTAAWCGPCR 120

Query: 121 LVSPVIKELSKDHPQVTTYKIDIDQEGLVRTLNELNITSVPTFHFFQSGKKGGEIIGADV 180
           LVSPVIKELSKDHPQVTTYKIDIDQEGLVRTLNELNITSVPTFHFFQSGKK GEIIGADV
Sbjct: 121 LVSPVIKELSKDHPQVTTYKIDIDQEGLVRTLNELNITSVPTFHFFQSGKKAGEIIGADV 180

Query: 181 AGIKNIVEKLYK 193
           AGIKNIVEKLYK
Sbjct: 181 AGIKNIVEKLYK 192

BLAST of MS022492.1 vs. ExPASy TrEMBL
Match: A0A6J1IR89 (thioredoxin O2, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478653 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 3.2e-75
Identity = 142/192 (73.96%), Postives = 160/192 (83.33%), Query Frame = 0

Query: 1   MVRNLVARWRVLRRVLDDGRRLGSCYRNYSVLNRSETIIGSRSSSSLPKLPFSSSSSNAP 60
           M  N++A+WR+LRR LD GR LG CYRNYS+ +RSE ++GS SSSS    P   S  +AP
Sbjct: 1   MGTNIIAQWRLLRRALDHGRWLGPCYRNYSIFSRSEILLGSSSSSSFSAAP---SHRSAP 60

Query: 61  DFHFPTPSFQHRRPICSASDPSNIVLITSEDQFNKALRKARDEALPAIFYFTAAWCGPCE 120
           DF  PT  FQH RP+CSASDPSNI++I SEDQF K+L KA+DEA PAIFYFTAAWCGPC 
Sbjct: 61  DFQSPTLPFQHCRPLCSASDPSNIIMIKSEDQFKKSLGKAQDEAFPAIFYFTAAWCGPCR 120

Query: 121 LVSPVIKELSKDHPQVTTYKIDIDQEGLVRTLNELNITSVPTFHFFQSGKKGGEIIGADV 180
           L+SPVIKELSK+HPQVTTYKIDIDQEGL R LN+LNITSVPT HFFQSGKK GEIIGADV
Sbjct: 121 LLSPVIKELSKNHPQVTTYKIDIDQEGLERALNDLNITSVPTLHFFQSGKKAGEIIGADV 180

Query: 181 AGIKNIVEKLYK 193
           AGIKNI+EKLYK
Sbjct: 181 AGIKNIMEKLYK 189

BLAST of MS022492.1 vs. ExPASy TrEMBL
Match: A0A6J1EDE2 (thioredoxin O1, mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433296 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 3.5e-74
Identity = 140/192 (72.92%), Postives = 162/192 (84.38%), Query Frame = 0

Query: 1   MVRNLVARWRVLRRVLDDGRRLGSCYRNYSVLNRSETIIGSRSSSSLPKLPFSSSSSNAP 60
           M RN+++ WR+LRR LD GR LG CYRNYS+ +RSE ++GS SSSS      + S  +AP
Sbjct: 1   MGRNIISHWRLLRRALDHGRWLGPCYRNYSIFSRSEILLGSSSSSS--SFSAAPSHRSAP 60

Query: 61  DFHFPTPSFQHRRPICSASDPSNIVLITSEDQFNKALRKARDEALPAIFYFTAAWCGPCE 120
           DF  P+  F+H RP+CSASDPSNI++I SEDQF K+L KA+DEALPAIFYFTAAWCGPC 
Sbjct: 61  DFQSPSLPFRHCRPLCSASDPSNIIMIKSEDQFKKSLGKAQDEALPAIFYFTAAWCGPCR 120

Query: 121 LVSPVIKELSKDHPQVTTYKIDIDQEGLVRTLNELNITSVPTFHFFQSGKKGGEIIGADV 180
           L+SPVIKELSK+HPQVTTYKIDIDQEGL RTL++LNITSVPT HFFQSGKK GEIIGADV
Sbjct: 121 LLSPVIKELSKNHPQVTTYKIDIDQEGLERTLSDLNITSVPTLHFFQSGKKAGEIIGADV 180

Query: 181 AGIKNIVEKLYK 193
           AGIKNI+EKLYK
Sbjct: 181 AGIKNIMEKLYK 190

BLAST of MS022492.1 vs. ExPASy TrEMBL
Match: A0A6J1IP12 (thioredoxin O2, mitochondrial-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478653 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.3e-68
Identity = 136/192 (70.83%), Postives = 154/192 (80.21%), Query Frame = 0

Query: 1   MVRNLVARWRVLRRVLDDGRRLGSCYRNYSVLNRSETIIGSRSSSSLPKLPFSSSSSNAP 60
           M  N++A+WR+LRR LD GR LG CYRNYS+ +RSE ++GS SSSS    P   S  +AP
Sbjct: 1   MGTNIIAQWRLLRRALDHGRWLGPCYRNYSIFSRSEILLGSSSSSSFSAAP---SHRSAP 60

Query: 61  DFHFPTPSFQHRRPICSASDPSNIVLITSEDQFNKALRKARDEALPAIFYFTAAWCGPCE 120
           DF  PT  FQH RP+CSASDPSNI++I SEDQF K+L KA+DEA PAIFYFTAAWCGPC 
Sbjct: 61  DFQSPTLPFQHCRPLCSASDPSNIIMIKSEDQFKKSLGKAQDEAFPAIFYFTAAWCGPCR 120

Query: 121 LVSPVIKELSKDHPQVTTYKIDIDQEGLVRTLNELNITSVPTFHFFQSGKKGGEIIGADV 180
           L+SPVIKELSK+HPQVTTYKIDIDQEGL R LN+LNITSV       SGKK GEIIGADV
Sbjct: 121 LLSPVIKELSKNHPQVTTYKIDIDQEGLERALNDLNITSV-------SGKKAGEIIGADV 180

Query: 181 AGIKNIVEKLYK 193
           AGIKNI+EKLYK
Sbjct: 181 AGIKNIMEKLYK 182

BLAST of MS022492.1 vs. ExPASy TrEMBL
Match: E5GCL6 (Thioredoxin OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 2.2e-68
Identity = 136/197 (69.04%), Postives = 161/197 (81.73%), Query Frame = 0

Query: 1   MVRNLVARWRVLRRVLDDGRRLGSCYRNYSVLNRSETIIGSRS--SSSLPKLPFSSSSS- 60
           M RNLV +WR+LRRVL DGR     YRNYS  +RS T +GS S  SSSL K  FSSSSS 
Sbjct: 1   MGRNLVPQWRLLRRVLHDGRLRTPFYRNYSTFSRSGTNLGSSSSPSSSLSKFLFSSSSSS 60

Query: 61  --NAPDFHFPTPSFQHRRPICSASDPSNIVLITSEDQFNKALRKARDEALPAIFYFTAAW 120
             +APDFHFP+  F H R +CSASDPSNI+LI SE+   ++L KAR+EALPAIFYFTAAW
Sbjct: 61  LRHAPDFHFPSVPFHHCRSLCSASDPSNIILIKSENLLKESLSKAREEALPAIFYFTAAW 120

Query: 121 CGPCELVSPVIKELSKDHPQVTTYKIDIDQEGLVRTLNELNITSVPTFHFFQSGKKGGEI 180
           CGPC L++PVIKELSK++P+VTTYKIDIDQEGL RTLN+LNITSVPT +FFQ GK+ G+I
Sbjct: 121 CGPCRLLAPVIKELSKNYPEVTTYKIDIDQEGLERTLNDLNITSVPTLYFFQDGKEAGQI 180

Query: 181 IGADVAGIKNIVEKLYK 193
           +GADVAGIKN++EK+YK
Sbjct: 181 VGADVAGIKNMMEKIYK 197

BLAST of MS022492.1 vs. TAIR 10
Match: AT2G35010.1 (thioredoxin O1 )

HSP 1 Score: 173.3 bits (438), Expect = 1.9e-43
Identity = 90/193 (46.63%), Postives = 129/193 (66.84%), Query Frame = 0

Query: 9   WRVLRRVLDDGRRLGSCYRNYSVLNRSET-----IIGSRSSSSL---PKLPFSSSSSNAP 68
           W ++R+VL    R  S  R+ +  +R  T     ++   S SSL     L  +S+   + 
Sbjct: 5   WSIVRKVL---HRQFSTLRSSTPSSRLSTSIRPLVLAPNSISSLIARNSLFTASNIGPSI 64

Query: 69  DFHFPTPSFQHRRPICS-ASDPSNIVLITSEDQFNKALRKARDEALPAIFYFTAAWCGPC 128
           DF+F   S  HRR +CS A   + +VL+ SE++F  A+ KA+D +LP++FYFTAAWCGPC
Sbjct: 65  DFNFSNTSLPHRRSLCSEAGGENGVVLVKSEEEFINAMSKAQDGSLPSVFYFTAAWCGPC 124

Query: 129 ELVSPVIKELSKDHPQVTTYKIDIDQEGLVRTLNELNITSVPTFHFFQSGKKGGEIIGAD 188
             +SPVI ELSK +P VTTYK+DID+ G+  T+++LNIT+VPT HFF+ G K GE++GAD
Sbjct: 125 RFISPVIVELSKQYPDVTTYKVDIDEGGISNTISKLNITAVPTLHFFKGGSKKGEVVGAD 184

Query: 189 VAGIKNIVEKLYK 193
           V  +KN++E+LYK
Sbjct: 185 VTKLKNLMEQLYK 194

BLAST of MS022492.1 vs. TAIR 10
Match: AT2G35010.2 (thioredoxin O1 )

HSP 1 Score: 173.3 bits (438), Expect = 1.9e-43
Identity = 90/193 (46.63%), Postives = 129/193 (66.84%), Query Frame = 0

Query: 9   WRVLRRVLDDGRRLGSCYRNYSVLNRSET-----IIGSRSSSSL---PKLPFSSSSSNAP 68
           W ++R+VL    R  S  R+ +  +R  T     ++   S SSL     L  +S+   + 
Sbjct: 5   WSIVRKVL---HRQFSTLRSSTPSSRLSTSIRPLVLAPNSISSLIARNSLFTASNIGPSI 64

Query: 69  DFHFPTPSFQHRRPICS-ASDPSNIVLITSEDQFNKALRKARDEALPAIFYFTAAWCGPC 128
           DF+F   S  HRR +CS A   + +VL+ SE++F  A+ KA+D +LP++FYFTAAWCGPC
Sbjct: 65  DFNFSNTSLPHRRSLCSEAGGENGVVLVKSEEEFINAMSKAQDGSLPSVFYFTAAWCGPC 124

Query: 129 ELVSPVIKELSKDHPQVTTYKIDIDQEGLVRTLNELNITSVPTFHFFQSGKKGGEIIGAD 188
             +SPVI ELSK +P VTTYK+DID+ G+  T+++LNIT+VPT HFF+ G K GE++GAD
Sbjct: 125 RFISPVIVELSKQYPDVTTYKVDIDEGGISNTISKLNITAVPTLHFFKGGSKKGEVVGAD 184

Query: 189 VAGIKNIVEKLYK 193
           V  +KN++E+LYK
Sbjct: 185 VTKLKNLMEQLYK 194

BLAST of MS022492.1 vs. TAIR 10
Match: AT1G31020.1 (thioredoxin O2 )

HSP 1 Score: 157.1 bits (396), Expect = 1.4e-38
Identity = 71/133 (53.38%), Postives = 97/133 (72.93%), Query Frame = 0

Query: 61  DFHFPTPSFQHRRPICSA-SDPSNIVLITSEDQFNKALRKARDEALPAIFYFTAAWCGPC 120
           +F+F   S  +RR  C A  D S+ V++ SE +FN AL KARD +LP++FYFTAAWCGPC
Sbjct: 27  EFNFLNTSLLNRRSFCFAEGDRSSFVVLKSEAEFNSALSKARDGSLPSVFYFTAAWCGPC 86

Query: 121 ELVSPVIKELSKDHPQVTTYKIDIDQEGLVRTLNELNITSVPTFHFFQSGKKGGEIIGAD 180
            L+SPVI ELS  +P VTTYK+DID+ GL   + +LN+++VPT  FF+ G K  EI+G D
Sbjct: 87  RLISPVILELSNKYPDVTTYKVDIDEGGLSNAIGKLNVSAVPTLQFFKGGVKKAEIVGVD 146

Query: 181 VAGIKNIVEKLYK 193
           V  +K+++E+LYK
Sbjct: 147 VVRLKSVMEQLYK 159

BLAST of MS022492.1 vs. TAIR 10
Match: AT3G17880.1 (tetraticopeptide domain-containing thioredoxin )

HSP 1 Score: 79.3 bits (194), Expect = 3.6e-15
Identity = 37/108 (34.26%), Postives = 59/108 (54.63%), Query Frame = 0

Query: 77  SASDPSNIVLITSEDQFNKALRKARDEALPAIFYFTAAWCGPCELVSPVIKELSKDHPQV 136
           +A +   ++ I S  +     + A+  +   I YFTA WCGPC  +SP+   L+  H +V
Sbjct: 265 AALNDGEVISIHSTSELEAKTKAAKKASRLLILYFTATWCGPCRYMSPLYSNLATQHSRV 324

Query: 137 TTYKIDIDQEGLVRTLNELNITSVPTFHFFQSGKKGGEIIGADVAGIK 185
              K+DID+   V      NI+SVPTF F + GK+  +++GAD   ++
Sbjct: 325 VFLKVDIDKANDVAA--SWNISSVPTFCFIRDGKEVDKVVGADKGSLE 370

BLAST of MS022492.1 vs. TAIR 10
Match: AT3G17880.2 (tetraticopeptide domain-containing thioredoxin )

HSP 1 Score: 79.3 bits (194), Expect = 3.6e-15
Identity = 37/108 (34.26%), Postives = 59/108 (54.63%), Query Frame = 0

Query: 77  SASDPSNIVLITSEDQFNKALRKARDEALPAIFYFTAAWCGPCELVSPVIKELSKDHPQV 136
           +A +   ++ I S  +     + A+  +   I YFTA WCGPC  +SP+   L+  H +V
Sbjct: 258 AALNDGEVISIHSTSELEAKTKAAKKASRLLILYFTATWCGPCRYMSPLYSNLATQHSRV 317

Query: 137 TTYKIDIDQEGLVRTLNELNITSVPTFHFFQSGKKGGEIIGADVAGIK 185
              K+DID+   V      NI+SVPTF F + GK+  +++GAD   ++
Sbjct: 318 VFLKVDIDKANDVAA--SWNISSVPTFCFIRDGKEVDKVVGADKGSLE 363

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022146703.14.4e-10398.96thioredoxin O2, mitochondrial-like [Momordica charantia][more]
XP_023545000.17.7e-7675.00thioredoxin O2, mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022978794.16.5e-7573.96thioredoxin O2, mitochondrial-like isoform X1 [Cucurbita maxima] >XP_022978795.1... [more]
XP_038883351.11.1e-7474.62thioredoxin O2, mitochondrial [Benincasa hispida][more]
XP_022926066.17.2e-7472.92thioredoxin O1, mitochondrial-like isoform X1 [Cucurbita moschata] >XP_022926067... [more]
Match NameE-valueIdentityDescription
O647642.6e-4246.63Thioredoxin O1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g35010 PE=1 ... [more]
Q93VQ91.9e-3753.38Thioredoxin O2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g31020 PE=1 ... [more]
Q655X01.6e-2838.22Thioredoxin O, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g06... [more]
Q6ES527.2e-1633.88TPR repeat-containing thioredoxin TDX OS=Oryza sativa subsp. japonica OX=39947 G... [more]
P800281.3e-1432.41Thioredoxin H-type OS=Chlamydomonas reinhardtii OX=3055 GN=TRXH PE=1 SV=3[more]
Match NameE-valueIdentityDescription
A0A6J1CZ912.1e-10398.96thioredoxin O2, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC11101584... [more]
A0A6J1IR893.2e-7573.96thioredoxin O2, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC... [more]
A0A6J1EDE23.5e-7472.92thioredoxin O1, mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=L... [more]
A0A6J1IP121.3e-6870.83thioredoxin O2, mitochondrial-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC... [more]
E5GCL62.2e-6869.04Thioredoxin OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G35010.11.9e-4346.63thioredoxin O1 [more]
AT2G35010.21.9e-4346.63thioredoxin O1 [more]
AT1G31020.11.4e-3853.38thioredoxin O2 [more]
AT3G17880.13.6e-1534.26tetraticopeptide domain-containing thioredoxin [more]
AT3G17880.23.6e-1534.26tetraticopeptide domain-containing thioredoxin [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 80..192
e-value: 7.1E-27
score: 95.4
NoneNo IPR availablePANTHERPTHR10438THIOREDOXINcoord: 40..192
NoneNo IPR availablePANTHERPTHR10438:SF405THIOREDOXIN O1, MITOCHONDRIALcoord: 40..192
NoneNo IPR availableCDDcd02947TRX_familycoord: 91..188
e-value: 5.05696E-27
score: 96.4732
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 86..185
e-value: 5.0E-17
score: 61.8
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 53..192
score: 10.886911
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 78..190

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MS022492MS022492gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MS022492.1-cdsMS022492.1-cds-scaffold720:2880..3117CDS
MS022492.1-cdsMS022492.1-cds-scaffold720:4257..4322CDS
MS022492.1-cdsMS022492.1-cds-scaffold720:4430..4484CDS
MS022492.1-cdsMS022492.1-cds-scaffold720:4619..4694CDS
MS022492.1-cdsMS022492.1-cds-scaffold720:5600..5644CDS
MS022492.1-cdsMS022492.1-cds-scaffold720:6295..6390CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MS022492.1MS022492.1-proteinpolypeptide