MS022333.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS022333.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Calcium-binding EF-hand family protein
Location	scaffold47: 2628127 .. 2628540 (+)
Sequence length	414
RNA-Seq Expression	MS022333.1
Synteny	MS022333.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGTGGAAATATTGGACAGTGCCACCATTGTCAACTTCGTCGAAGATGAGGCGGCCTTTGATGCCTTCATCAGAGACCGTTTTGCTCACCTCGACACCAACCATGACGGTCTCCTTTCCTACACTGAGATGTTGAGGGAGTTACAGAGTCTCAGAGTCTTCGAGATCCATTTCGGAATCGATGTGAAGCCTGATCCAGATGAGCTTTCTACTGTCTATAGTTCTCTGTTTTTGCAGTTTGATCATGACTCGAGTGGAAAGGTTGATCTTGATGAGTTTAAGGCTGAGACCAAGAGGATGATGCTGGCTACGGCTAATGGGATGGGATTCTTGCCTGTTCAGATGGTGCTAGAAGAGGGCAGCTTCTTGATGAAGGCTGTTGAGAGAGAAACCACCATAATGGCTGCTTCA

mRNA sequence

ATGAGTGTGGAAATATTGGACAGTGCCACCATTGTCAACTTCGTCGAAGATGAGGCGGCCTTTGATGCCTTCATCAGAGACCGTTTTGCTCACCTCGACACCAACCATGACGGTCTCCTTTCCTACACTGAGATGTTGAGGGAGTTACAGAGTCTCAGAGTCTTCGAGATCCATTTCGGAATCGATGTGAAGCCTGATCCAGATGAGCTTTCTACTGTCTATAGTTCTCTGTTTTTGCAGTTTGATCATGACTCGAGTGGAAAGGTTGATCTTGATGAGTTTAAGGCTGAGACCAAGAGGATGATGCTGGCTACGGCTAATGGGATGGGATTCTTGCCTGTTCAGATGGTGCTAGAAGAGGGCAGCTTCTTGATGAAGGCTGTTGAGAGAGAAACCACCATAATGGCTGCTTCA

Coding sequence (CDS)

ATGAGTGTGGAAATATTGGACAGTGCCACCATTGTCAACTTCGTCGAAGATGAGGCGGCCTTTGATGCCTTCATCAGAGACCGTTTTGCTCACCTCGACACCAACCATGACGGTCTCCTTTCCTACACTGAGATGTTGAGGGAGTTACAGAGTCTCAGAGTCTTCGAGATCCATTTCGGAATCGATGTGAAGCCTGATCCAGATGAGCTTTCTACTGTCTATAGTTCTCTGTTTTTGCAGTTTGATCATGACTCGAGTGGAAAGGTTGATCTTGATGAGTTTAAGGCTGAGACCAAGAGGATGATGCTGGCTACGGCTAATGGGATGGGATTCTTGCCTGTTCAGATGGTGCTAGAAGAGGGCAGCTTCTTGATGAAGGCTGTTGAGAGAGAAACCACCATAATGGCTGCTTCA

Protein sequence

MSVEILDSATIVNFVEDEAAFDAFIRDRFAHLDTNHDGLLSYTEMLRELQSLRVFEIHFGIDVKPDPDELSTVYSSLFLQFDHDSSGKVDLDEFKAETKRMMLATANGMGFLPVQMVLEEGSFLMKAVERETTIMAAS

Homology

[Close]

BLAST of MS022333.1 vs. NCBI nr
Match: XP_022135623.1 (uncharacterized protein LOC111007532 [Momordica charantia])

HSP 1 Score: 270.8 bits (691), Expect = 6.6e-69
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MSVEILDSATIVNFVEDEAAFDAFIRDRFAHLDTNHDGLLSYTEMLRELQSLRVFEIHFG 60
           MSVEILDSATIVNFVEDEAAFDAFIRDRFAHLDTNHDGLLSYTEMLRELQSLRVFEIHFG
Sbjct: 1   MSVEILDSATIVNFVEDEAAFDAFIRDRFAHLDTNHDGLLSYTEMLRELQSLRVFEIHFG 60

Query: 61  IDVKPDPDELSTVYSSLFLQFDHDSSGKVDLDEFKAETKRMMLATANGMGFLPVQMVLEE 120
           IDVKPDPDELSTVYSSLFLQFDHDSSGKVDLDEFKAETKRMMLATANGMGFLPVQMVLEE
Sbjct: 61  IDVKPDPDELSTVYSSLFLQFDHDSSGKVDLDEFKAETKRMMLATANGMGFLPVQMVLEE 120

Query: 121 GSFLMKAVERETTIMAAS 139
           GSFLMKAVERETTIMAAS
Sbjct: 121 GSFLMKAVERETTIMAAS 138

[Close]

BLAST of MS022333.1 vs. NCBI nr
Match: XP_008449396.1 (PREDICTED: uncharacterized protein LOC103491294 [Cucumis melo] >KAA0057366.1 Calcium-binding EF-hand family protein [Cucumis melo var. makuwa] >TYK30055.1 Calcium-binding EF-hand family protein [Cucumis melo var. makuwa])

HSP 1 Score: 241.1 bits (614), Expect = 5.6e-60
Identity = 122/137 (89.05%), Postives = 127/137 (92.70%), Query Frame = 0


Query: 1   MSVEILDSATIVNFVEDEAAFDAFIRDRFAHLDTNHDGLLSYTEMLRELQSLRVFEIHFG 60
           MSVEILDSATIVNFVED+ AF AFIRDRFAHLDTNHDGLLSY+EML EL +LRVFE HFG
Sbjct: 1   MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFG 60

Query: 61  IDVKPDPDELSTVYSSLFLQFDHDSSGKVDLDEFKAETKRMMLATANGMGFLPVQMVLEE 120
           IDVKPDP+ELS+VYSSLFLQFDHDSSG VDLDEFKAETKRMML  ANGMGFLPVQMVLEE
Sbjct: 61  IDVKPDPEELSSVYSSLFLQFDHDSSGTVDLDEFKAETKRMMLDMANGMGFLPVQMVLEE 120

Query: 121 GSFLMKAVERETTIMAA 138
           GSFLMKAVERET I AA
Sbjct: 121 GSFLMKAVERETAITAA 137

[Close]

BLAST of MS022333.1 vs. NCBI nr
Match: XP_038888297.1 (uncharacterized protein LOC120078146 [Benincasa hispida])

HSP 1 Score: 241.1 bits (614), Expect = 5.6e-60
Identity = 123/137 (89.78%), Postives = 126/137 (91.97%), Query Frame = 0


Query: 1   MSVEILDSATIVNFVEDEAAFDAFIRDRFAHLDTNHDGLLSYTEMLRELQSLRVFEIHFG 60
           MSVEILDSATIVNFVED+ AF AFIRDRFAHLDTNHDGLLSYTEML EL +LRVFE HFG
Sbjct: 54  MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNHDGLLSYTEMLEELHTLRVFETHFG 113

Query: 61  IDVKPDPDELSTVYSSLFLQFDHDSSGKVDLDEFKAETKRMMLATANGMGFLPVQMVLEE 120
           IDVKPDPDELS+VYSSLFLQFD DSSG VDLDEF AETKRMML  ANGMGFLPVQMVLEE
Sbjct: 114 IDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFMAETKRMMLDMANGMGFLPVQMVLEE 173

Query: 121 GSFLMKAVERETTIMAA 138
           GSFLMKAVERET IMAA
Sbjct: 174 GSFLMKAVERETAIMAA 190

[Close]

BLAST of MS022333.1 vs. NCBI nr
Match: KAE8647336.1 (hypothetical protein Csa_003380 [Cucumis sativus])

HSP 1 Score: 237.7 bits (605), Expect = 6.2e-59
Identity = 121/137 (88.32%), Postives = 126/137 (91.97%), Query Frame = 0


Query: 1   MSVEILDSATIVNFVEDEAAFDAFIRDRFAHLDTNHDGLLSYTEMLRELQSLRVFEIHFG 60
           MSVEILDSATIVNFVED+ AF AFIRDRFAHLDTN DGLLSY+EML EL +LRVFE HFG
Sbjct: 31  MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFG 90

Query: 61  IDVKPDPDELSTVYSSLFLQFDHDSSGKVDLDEFKAETKRMMLATANGMGFLPVQMVLEE 120
           IDVKPDPDELS+VYSSLFLQFD DSSG VDLDEF+AETKRMMLA ANGMGFLPVQMVLEE
Sbjct: 91  IDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFRAETKRMMLAMANGMGFLPVQMVLEE 150

Query: 121 GSFLMKAVERETTIMAA 138
           GSFLMKAVERET I AA
Sbjct: 151 GSFLMKAVERETAITAA 167

[Close]

BLAST of MS022333.1 vs. NCBI nr
Match: XP_011657544.1 (uncharacterized protein LOC105435869 [Cucumis sativus])

HSP 1 Score: 237.7 bits (605), Expect = 6.2e-59
Identity = 121/137 (88.32%), Postives = 126/137 (91.97%), Query Frame = 0


Query: 1   MSVEILDSATIVNFVEDEAAFDAFIRDRFAHLDTNHDGLLSYTEMLRELQSLRVFEIHFG 60
           MSVEILDSATIVNFVED+ AF AFIRDRFAHLDTN DGLLSY+EML EL +LRVFE HFG
Sbjct: 1   MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFG 60

Query: 61  IDVKPDPDELSTVYSSLFLQFDHDSSGKVDLDEFKAETKRMMLATANGMGFLPVQMVLEE 120
           IDVKPDPDELS+VYSSLFLQFD DSSG VDLDEF+AETKRMMLA ANGMGFLPVQMVLEE
Sbjct: 61  IDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFRAETKRMMLAMANGMGFLPVQMVLEE 120

Query: 121 GSFLMKAVERETTIMAA 138
           GSFLMKAVERET I AA
Sbjct: 121 GSFLMKAVERETAITAA 137

[Close]

BLAST of MS022333.1 vs. ExPASy TrEMBL
Match: A0A6J1C5B4 (uncharacterized protein LOC111007532 OS=Momordica charantia OX=3673 GN=LOC111007532 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.2e-69
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MSVEILDSATIVNFVEDEAAFDAFIRDRFAHLDTNHDGLLSYTEMLRELQSLRVFEIHFG 60
           MSVEILDSATIVNFVEDEAAFDAFIRDRFAHLDTNHDGLLSYTEMLRELQSLRVFEIHFG
Sbjct: 1   MSVEILDSATIVNFVEDEAAFDAFIRDRFAHLDTNHDGLLSYTEMLRELQSLRVFEIHFG 60

Query: 61  IDVKPDPDELSTVYSSLFLQFDHDSSGKVDLDEFKAETKRMMLATANGMGFLPVQMVLEE 120
           IDVKPDPDELSTVYSSLFLQFDHDSSGKVDLDEFKAETKRMMLATANGMGFLPVQMVLEE
Sbjct: 61  IDVKPDPDELSTVYSSLFLQFDHDSSGKVDLDEFKAETKRMMLATANGMGFLPVQMVLEE 120

Query: 121 GSFLMKAVERETTIMAAS 139
           GSFLMKAVERETTIMAAS
Sbjct: 121 GSFLMKAVERETTIMAAS 138

[Close]

BLAST of MS022333.1 vs. ExPASy TrEMBL
Match: A0A5D3E445 (Calcium-binding EF-hand family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00260 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 2.7e-60
Identity = 122/137 (89.05%), Postives = 127/137 (92.70%), Query Frame = 0


Query: 1   MSVEILDSATIVNFVEDEAAFDAFIRDRFAHLDTNHDGLLSYTEMLRELQSLRVFEIHFG 60
           MSVEILDSATIVNFVED+ AF AFIRDRFAHLDTNHDGLLSY+EML EL +LRVFE HFG
Sbjct: 1   MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFG 60

Query: 61  IDVKPDPDELSTVYSSLFLQFDHDSSGKVDLDEFKAETKRMMLATANGMGFLPVQMVLEE 120
           IDVKPDP+ELS+VYSSLFLQFDHDSSG VDLDEFKAETKRMML  ANGMGFLPVQMVLEE
Sbjct: 61  IDVKPDPEELSSVYSSLFLQFDHDSSGTVDLDEFKAETKRMMLDMANGMGFLPVQMVLEE 120

Query: 121 GSFLMKAVERETTIMAA 138
           GSFLMKAVERET I AA
Sbjct: 121 GSFLMKAVERETAITAA 137

[Close]

BLAST of MS022333.1 vs. ExPASy TrEMBL
Match: A0A1S3BLY5 (uncharacterized protein LOC103491294 OS=Cucumis melo OX=3656 GN=LOC103491294 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 2.7e-60
Identity = 122/137 (89.05%), Postives = 127/137 (92.70%), Query Frame = 0


Query: 1   MSVEILDSATIVNFVEDEAAFDAFIRDRFAHLDTNHDGLLSYTEMLRELQSLRVFEIHFG 60
           MSVEILDSATIVNFVED+ AF AFIRDRFAHLDTNHDGLLSY+EML EL +LRVFE HFG
Sbjct: 1   MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLRVFETHFG 60

Query: 61  IDVKPDPDELSTVYSSLFLQFDHDSSGKVDLDEFKAETKRMMLATANGMGFLPVQMVLEE 120
           IDVKPDP+ELS+VYSSLFLQFDHDSSG VDLDEFKAETKRMML  ANGMGFLPVQMVLEE
Sbjct: 61  IDVKPDPEELSSVYSSLFLQFDHDSSGTVDLDEFKAETKRMMLDMANGMGFLPVQMVLEE 120

Query: 121 GSFLMKAVERETTIMAA 138
           GSFLMKAVERET I AA
Sbjct: 121 GSFLMKAVERETAITAA 137

[Close]

BLAST of MS022333.1 vs. ExPASy TrEMBL
Match: A0A0A0KHT7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G418660 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 3.0e-59
Identity = 121/137 (88.32%), Postives = 126/137 (91.97%), Query Frame = 0


Query: 1   MSVEILDSATIVNFVEDEAAFDAFIRDRFAHLDTNHDGLLSYTEMLRELQSLRVFEIHFG 60
           MSVEILDSATIVNFVED+ AF AFIRDRFAHLDTN DGLLSY+EML EL +LRVFE HFG
Sbjct: 1   MSVEILDSATIVNFVEDDVAFGAFIRDRFAHLDTNRDGLLSYSEMLEELHTLRVFETHFG 60

Query: 61  IDVKPDPDELSTVYSSLFLQFDHDSSGKVDLDEFKAETKRMMLATANGMGFLPVQMVLEE 120
           IDVKPDPDELS+VYSSLFLQFD DSSG VDLDEF+AETKRMMLA ANGMGFLPVQMVLEE
Sbjct: 61  IDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFRAETKRMMLAMANGMGFLPVQMVLEE 120

Query: 121 GSFLMKAVERETTIMAA 138
           GSFLMKAVERET I AA
Sbjct: 121 GSFLMKAVERETAITAA 137

[Close]

BLAST of MS022333.1 vs. ExPASy TrEMBL
Match: A0A6J1JN55 (uncharacterized protein LOC111486198 OS=Cucurbita maxima OX=3661 GN=LOC111486198 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.8e-56
Identity = 117/135 (86.67%), Postives = 123/135 (91.11%), Query Frame = 0


Query: 1   MSVEILDSATIVNFVEDEAAFDAFIRDRFAHLDTNHDGLLSYTEMLRELQSLRVFEIHFG 60
           MSVEILDSATIVNFVEDEAAF AFI DRFAHLDTNHDGLLSY+EML+ELQSLRV E  FG
Sbjct: 1   MSVEILDSATIVNFVEDEAAFGAFIGDRFAHLDTNHDGLLSYSEMLKELQSLRVIEADFG 60

Query: 61  IDVKPDPDELSTVYSSLFLQFDHDSSGKVDLDEFKAETKRMMLATANGMGFLPVQMVLEE 120
           IDVKPDPDELS+VYSS+FLQFD +SSG VDLDEFKAE KRMMLA ANG+G LPVQMVLEE
Sbjct: 61  IDVKPDPDELSSVYSSMFLQFDRNSSGTVDLDEFKAENKRMMLAMANGIGALPVQMVLEE 120

Query: 121 GSFLMKAVERETTIM 136
           GSFLMKAVERE  IM
Sbjct: 121 GSFLMKAVEREVAIM 135

[Close]

BLAST of MS022333.1 vs. TAIR 10
Match: AT2G44310.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 124.4 bits (311), Expect = 7.1e-29
Identity = 60/135 (44.44%), Postives = 94/135 (69.63%), Query Frame = 0


Query: 1   MSVEILDSATIVNFVEDEAAFDAFIRDRFAHLDTNHDGLLSYTEMLRELQSLRVFEIHFG 60
           M V ++D +T+ +FV+DE  F   + +RFA LD N DG+LS +E+ +  +S+R+ E HFG
Sbjct: 1   MGVVLIDGSTVRSFVDDEEQFKKSVDERFAALDLNKDGVLSRSELRKAFESMRLLESHFG 60

Query: 61  IDVKPDPDELSTVYSSLFLQFDHDSSGKVDLDEFKAETKRMMLATANGMGFLPVQMVL-- 120
           +DV    DEL+ +Y S+F +FD D SG VDL+EF++E K+++LA A+G+G  P+ MVL  
Sbjct: 61  VDVVTPQDELTNLYDSIFEKFDTDQSGSVDLEEFRSEMKKIVLAIADGLGSCPITMVLDD 120

Query: 121 EEGSFLMKAVERETT 134
           ++ +FL KA + E +
Sbjct: 121 DDDNFLKKAADLEAS 135

[Close]

BLAST of MS022333.1 vs. TAIR 10
Match: AT4G38810.2 (Calcium-binding EF-hand family protein )

HSP 1 Score: 62.8 bits (151), Expect = 2.5e-10
Identity = 37/125 (29.60%), Postives = 61/125 (48.80%), Query Frame = 0


Query: 4   EILDSATIVNFVEDEAAFDAFIRDRFAHLDTNHDGLLSYTEMLRELQSLRVFEIHFGIDV 63
           ++LD + IV  VE+E  FD F+  +F  LD + DG LS TE+   +  +       G+  
Sbjct: 13  QVLDGSDIVELVENEKVFDKFVEQKFQQLDQDEDGKLSVTELQPAVADIGA---ALGLPA 72

Query: 64  KPDPDELSTVYSSLFLQFDHDSSGKVDLDEFKAETKRMMLATANGMGFLPVQMVLEEGSF 123
           +    +   +YS +  +F H S  KV   EFK     ++L  A G+   P+ ++  +G  
Sbjct: 73  QGTSPDSDHIYSEVLNEFTHGSQEKVSKTEFKEVLSDILLGMAAGLKRDPIVILRMDGED 132

Query: 124 LMKAV 129
           L + V
Sbjct: 133 LSEFV 134

[Close]

BLAST of MS022333.1 vs. TAIR 10
Match: AT1G54530.1 (Calcium-binding EF hand family protein )

HSP 1 Score: 59.3 bits (142), Expect = 2.8e-09
Identity = 39/128 (30.47%), Postives = 67/128 (52.34%), Query Frame = 0


Query: 5   ILDSATIVNFVEDEAAFDAFIRDRFAHLDTNHDGLLSYTEMLRELQSLRVFEIHFGIDVK 64
           ++ S T++ F+ D  +F++   D F  LD + +G+LS +E+ + L ++   E     +V 
Sbjct: 5   VITSKTLIGFLSDTKSFESITNDYFQILDLDKNGMLSPSELRQGLNNVVAVE----SEVA 64

Query: 65  PDPDELSTVYSSLFLQFDHDSSGKVDLDEFKAETKRMMLATANGMGFLPVQMVLEEGSFL 124
           P  DE   VY+++F +F  D   K     F+     ++ A A G+G  PV MV+     +
Sbjct: 65  PG-DETDNVYNAIFERFGEDLVPK----NFRDLIAEILTAMARGIGNSPVIMVVHNDGLI 123

Query: 125 MKAVERET 133
           MKAV  E+
Sbjct: 125 MKAVLHES 123

The following BLAST results are available for this feature:

BLAST of MS022333.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135623.1	6.6e-69	100.00	uncharacterized protein LOC111007532 [Momordica charantia]	[more]
XP_008449396.1	5.6e-60	89.05	PREDICTED: uncharacterized protein LOC103491294 [Cucumis melo] >KAA0057366.1 Cal...	[more]
XP_038888297.1	5.6e-60	89.78	uncharacterized protein LOC120078146 [Benincasa hispida]	[more]
KAE8647336.1	6.2e-59	88.32	hypothetical protein Csa_003380 [Cucumis sativus]	[more]
XP_011657544.1	6.2e-59	88.32	uncharacterized protein LOC105435869 [Cucumis sativus]	[more]

BLAST of MS022333.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS022333.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C5B4	3.2e-69	100.00	uncharacterized protein LOC111007532 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A5D3E445	2.7e-60	89.05	Calcium-binding EF-hand family protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3BLY5	2.7e-60	89.05	uncharacterized protein LOC103491294 OS=Cucumis melo OX=3656 GN=LOC103491294 PE=...	[more]
A0A0A0KHT7	3.0e-59	88.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G418660 PE=4 SV=1	[more]
A0A6J1JN55	1.8e-56	86.67	uncharacterized protein LOC111486198 OS=Cucurbita maxima OX=3661 GN=LOC111486198...	[more]

BLAST of MS022333.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44310.1	7.1e-29	44.44	Calcium-binding EF-hand family protein	[more]
AT4G38810.2	2.5e-10	29.60	Calcium-binding EF-hand family protein	[more]
AT1G54530.1	2.8e-09	30.47	Calcium-binding EF hand family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 73..101 e-value: 12.0 score: 9.1 coord: 24..52 e-value: 1.5 score: 16.3
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 25..96 e-value: 3.4E-12 score: 46.6
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 20..55 score: 9.436442
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 69..104 score: 8.822743
None	No IPR available	GENE3D	1.10.238.10		coord: 5..108 e-value: 2.3E-11 score: 45.9
None	No IPR available	PANTHER	PTHR34574	CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED	coord: 1..132
None	No IPR available	PANTHER	PTHR34574:SF10	CALCIUM-BINDING EF-HAND FAMILY PROTEIN-LIKE	coord: 1..132
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 82..94
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 33..45
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 23..97

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS022333	MS022333	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS022333.1-cds	MS022333.1-cds-scaffold47:2628127..2628540	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS022333.1	MS022333.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding