MS021678.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS021678.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	WUSCHEL-related homeobox 1-like
Location	scaffold348: 265683 .. 268571 (-)
Sequence length	1074
RNA-Seq Expression	MS021678.1
Synteny	MS021678.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGATGATGGGATACAATGACGGCGGAGATAGCTTCAACTTCCCTCCTGATTCCTTCAATGGCCGCAAGCTTAGGCCTTTAATTCCTCGCCCACTCTCTTCTCTTTCCCCCAATACTTCTTCTCCTTCCTCCTCCTCCAACCCTCTCCACACCAACGACTTCTTCTCCCACTTTCATCACATGGGTGTGTAATATTTTTTTACCTTAAAAAATAATTATTATCGAGTTATGTTTCGATTGACTGAATTTTGTTATGCTGCAGCAACGGTGGGCGATCAGAGCAAGAGGGAGTTGAGCAATGGGGCGCCGGTGGTGGTGAGCTCGAGGTGGAATCCAACACCGGAGCAGTTGAGGGTGCTGGAGGAATTGTACCGGCGGGGGACTCGGACGCCGTCGGCGGAGCAAATTCAACATATCACTGCTCAGCTCCGCCGCTACGGTAAGATTGAAGGTAAGAACGTGTTCTACTGGTTCCAGAACCACAAAGCTAGAGAGCGCCAGAAACGCCGCCGCCAAATGGAATCCGCCGCCGACAACTCCGCGGCCGCTCGCGAACTCCAAATCATTGAAGCCAAAGATTCAGGTGATCGCATATCAGAAACCCCTTTCCCATAATCATTATAATTTATCCATACCCAAATCCATGAACTTTGGAATCTAACGACTTATCTCGAGAAATAAATTTTAAAATCATTTCTGTTGTGAATGTATGAATTAAAGTTAGCCAATCTATTAGTTTTTGGGCTTGAGGATGGTTTATTCCTCCTTGACAATTTCAAATAATTTTAGTTTTCTTTTTTTCTTTTCTGTTATTGGGAATGAGAAAGATTTTTAAAAAATGTCATTAAATATCGTAGGGGCATAAAAAACAAAATAAGAAATCAATCTCCCTGCAAAATCTCACAATTTTCGTTGAGTTAGGCTCGTATTTACAAATTTTATGGATTAACACAGAAGTTACTTTGAAATAAAGCAGATGGGTAACTTTCAGGCCATCCCATTTTGTCGTATGAGCATGAGGCTGAAATAAAATTTCATTTTTTGTTTTCATCTTTATTATTTTTGGGTTCTAAACATTCCATTTGTTTTGTTGAGATGTAAAGTCGTATTCTTTTTTGTTTTACTTTTTGTCAACAGGGTCGGGAAGGACAGCGTATGAAGTTGAACAGACCAAAAACTGCACTACACTTCCGGAGGTGTCCAACTTTTTTCCCTTCCTCACCTTTTATTTTAGACCAAGTTTTCAGAACTAATCATATACATTATTCTTTAGTTATAGGGAAAAAAAAGTTGTCTGTTTTGGATCTTCTCCAAAAGTTGACCCACATGATTAACTAACTAGAAGAAAACAGACGAGAATTAAATTTAGTACAATAATAATTTGTGGTGATGATTAGATAAAAATGTGTCCCATCCCATGCATATGAAAGGCTTTAGGGTGGAAAAAAGTGAGGAGAAGAAAGAAGAAGAAGGCAACAAAAAGCTTAGTTTGTTGGGAAATGAAAAGGGTCTAAAAGCTGCATTCTTTCCTTTCTGTCGGCTCTATAGCTGCCTGTTATGAAACTTTGGACGAGATATTGGGCCTCTCGCCTTCGCCTTTTCATGCCATCTTCCATTCTCCACCCTTAAAAAAACAAAAAAAAAAAAGTTCAAAATTTATGAAGATGCATGCTTCCTTTTCCATTCACGCCATTCAAATTCAATAATAATAATAATGTCCTAGGGTTTCTAAACAAAATTTATAGTACTCCCGTGATATCTATTCCCTTCCTTTACGCAATGAAATCATTCTTTTTCACGACTCCACGCATTGTTCTTAAACTATAGTGATGTAGTTGATAATGAATTGATGGAGTAGTATTGATACTATTTCTCTCTCATACTTGTCAAAAATTTTGTCGGTAAGAACCCTACCTAGTTAGTAGAGAAGTATTATTTCTCTTCCTTAATGTTATTGGAGTTACATCATTCATAAATACTGTTGATAAGAAAATACTTGACTCCTCACTGGTAGGGAGAAATTAATTTTACCTTGCCACCATTAAATATTTGATCACTCGATCATTTTTTTTTTTTTAACTTTTTGTTTTTACCTTTTCCTTTCTTAGTTGTTAGATATTTAACCGTGGCAAAGGATAAGACTCCTCATTTTTCTGGTTGACACGGTGGGATTGATGCAATAATTGTCTTTCTAAGTGTGAAATGTGGGAGGAGGTCCTAAAGGGTTTCTTCACAAATTAAACCATAAACCTGAAATGTCCATATTAACCCCTCCATAACAACATATTATTGTAACTAAAAGTCAATATATGTGTTTTGGATTTATGTGTAGTGTACCCTCTTTTTATAAAATTTATTTAAAATTTTTGAAAACCACAGGAATCTGTTCCAATTCAACGGGCGGCAAAAGCAAGTGTAATGGCAGGAGATTGCTGCAGGACAGACAATGGATGGCTCCAATTCGAGGAATTGCACCAACGAAGGAACAACAACAATACCTTTGCTGAAAAGAATAATAACATTATTGTTGCACCCTCCTCGTTGCAGATTATGCATTGTGCGGCGGCGCCCCTCGCCGGCGCTGCCTCCACCACCACTGCCGCCACGGTCACCACAATATTGCATCAAAAATCCCATCATAATAACAACAACAACAATAATGTTGGTGCACCCTTTATTGTTGGGCTCGAGGAGGAGGAAGAAGAGGAAATTTCAGGAGAAGAAGGAGAAGGAGAAACCCTACAACTTTTTCCTCTGTGCAGTGACACCAGAATTAGCAGAAGCAGAAGCGGTGAGATTATTGGAGGTAAAACAGTAGAAACTTCAGGCATGAATAGTACTAATCTGACTCCACTTCAGTTCTTTGAATTCCTTCCTTTGAAGAAT

mRNA sequence

ATGTGGATGATGGGATACAATGACGGCGGAGATAGCTTCAACTTCCCTCCTGATTCCTTCAATGGCCGCAAGCTTAGGCCTTTAATTCCTCGCCCACTCTCTTCTCTTTCCCCCAATACTTCTTCTCCTTCCTCCTCCTCCAACCCTCTCCACACCAACGACTTCTTCTCCCACTTTCATCACATGGCAACGGTGGGCGATCAGAGCAAGAGGGAGTTGAGCAATGGGGCGCCGGTGGTGGTGAGCTCGAGGTGGAATCCAACACCGGAGCAGTTGAGGGTGCTGGAGGAATTGTACCGGCGGGGGACTCGGACGCCGTCGGCGGAGCAAATTCAACATATCACTGCTCAGCTCCGCCGCTACGGTAAGATTGAAGGTAAGAACGTGTTCTACTGGTTCCAGAACCACAAAGCTAGAGAGCGCCAGAAACGCCGCCGCCAAATGGAATCCGCCGCCGACAACTCCGCGGCCGCTCGCGAACTCCAAATCATTGAAGCCAAAGATTCAGGGTCGGGAAGGACAGCGTATGAAGTTGAACAGACCAAAAACTGCACTACACTTCCGGAGGAATCTGTTCCAATTCAACGGGCGGCAAAAGCAAGTGTAATGGCAGGAGATTGCTGCAGGACAGACAATGGATGGCTCCAATTCGAGGAATTGCACCAACGAAGGAACAACAACAATACCTTTGCTGAAAAGAATAATAACATTATTGTTGCACCCTCCTCGTTGCAGATTATGCATTGTGCGGCGGCGCCCCTCGCCGGCGCTGCCTCCACCACCACTGCCGCCACGGTCACCACAATATTGCATCAAAAATCCCATCATAATAACAACAACAACAATAATGTTGGTGCACCCTTTATTGTTGGGCTCGAGGAGGAGGAAGAAGAGGAAATTTCAGGAGAAGAAGGAGAAGGAGAAACCCTACAACTTTTTCCTCTGTGCAGTGACACCAGAATTAGCAGAAGCAGAAGCGGTGAGATTATTGGAGGTAAAACAGTAGAAACTTCAGGCATGAATAGTACTAATCTGACTCCACTTCAGTTCTTTGAATTCCTTCCTTTGAAGAAT

Coding sequence (CDS)

ATGTGGATGATGGGATACAATGACGGCGGAGATAGCTTCAACTTCCCTCCTGATTCCTTCAATGGCCGCAAGCTTAGGCCTTTAATTCCTCGCCCACTCTCTTCTCTTTCCCCCAATACTTCTTCTCCTTCCTCCTCCTCCAACCCTCTCCACACCAACGACTTCTTCTCCCACTTTCATCACATGGCAACGGTGGGCGATCAGAGCAAGAGGGAGTTGAGCAATGGGGCGCCGGTGGTGGTGAGCTCGAGGTGGAATCCAACACCGGAGCAGTTGAGGGTGCTGGAGGAATTGTACCGGCGGGGGACTCGGACGCCGTCGGCGGAGCAAATTCAACATATCACTGCTCAGCTCCGCCGCTACGGTAAGATTGAAGGTAAGAACGTGTTCTACTGGTTCCAGAACCACAAAGCTAGAGAGCGCCAGAAACGCCGCCGCCAAATGGAATCCGCCGCCGACAACTCCGCGGCCGCTCGCGAACTCCAAATCATTGAAGCCAAAGATTCAGGGTCGGGAAGGACAGCGTATGAAGTTGAACAGACCAAAAACTGCACTACACTTCCGGAGGAATCTGTTCCAATTCAACGGGCGGCAAAAGCAAGTGTAATGGCAGGAGATTGCTGCAGGACAGACAATGGATGGCTCCAATTCGAGGAATTGCACCAACGAAGGAACAACAACAATACCTTTGCTGAAAAGAATAATAACATTATTGTTGCACCCTCCTCGTTGCAGATTATGCATTGTGCGGCGGCGCCCCTCGCCGGCGCTGCCTCCACCACCACTGCCGCCACGGTCACCACAATATTGCATCAAAAATCCCATCATAATAACAACAACAACAATAATGTTGGTGCACCCTTTATTGTTGGGCTCGAGGAGGAGGAAGAAGAGGAAATTTCAGGAGAAGAAGGAGAAGGAGAAACCCTACAACTTTTTCCTCTGTGCAGTGACACCAGAATTAGCAGAAGCAGAAGCGGTGAGATTATTGGAGGTAAAACAGTAGAAACTTCAGGCATGAATAGTACTAATCTGACTCCACTTCAGTTCTTTGAATTCCTTCCTTTGAAGAAT

Protein sequence

MWMMGYNDGGDSFNFPPDSFNGRKLRPLIPRPLSSLSPNTSSPSSSSNPLHTNDFFSHFHHMATVGDQSKRELSNGAPVVVSSRWNPTPEQLRVLEELYRRGTRTPSAEQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMESAADNSAAARELQIIEAKDSGSGRTAYEVEQTKNCTTLPEESVPIQRAAKASVMAGDCCRTDNGWLQFEELHQRRNNNNTFAEKNNNIIVAPSSLQIMHCAAAPLAGAASTTTAATVTTILHQKSHHNNNNNNNVGAPFIVGLEEEEEEEISGEEGEGETLQLFPLCSDTRISRSRSGEIIGGKTVETSGMNSTNLTPLQFFEFLPLKN

Homology

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BLAST of MS021678.1 vs. NCBI nr
Match: XP_038893790.1 (WUSCHEL-related homeobox 1-like [Benincasa hispida])

HSP 1 Score: 436.8 bits (1122), Expect = 1.8e-118
Identity = 264/402 (65.67%), Postives = 289/402 (71.89%), Query Frame = 0


Query: 1   MWMMGYNDGGDSFNFPPD-SFNGRKLRPLIPRPLSSLSPNTSSPSSSSNP---LHTNDFF 60
           MWMMGYND  D FNFP D SFN RKLRPL+PRPL S S ++SS  +++ P   +HTNDFF
Sbjct: 1   MWMMGYNDAPDHFNFPSDNSFNSRKLRPLVPRPLHSSSSSSSSSINTNPPFNLIHTNDFF 60

Query: 61  SHFHHMATVGDQSKRELSN---GAPVVVSSRWNPTPEQLRVLEELYRRGTRTPSAEQIQH 120
           S FHHMATV DQ+KREL+N     PVVVSSRWNPTPEQLRVLEELYRRGTRTPSA+QIQH
Sbjct: 61  SQFHHMATVTDQNKRELNNVTPSPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQH 120

Query: 121 ITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMESAADNSAAARELQIIEAKDSGSGR 180
           ITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMESA     +A +L I+E KDSGSGR
Sbjct: 121 ITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMESA----ISAADLDILERKDSGSGR 180

Query: 181 TAYEVEQTK------NCTTLPEESVPIQRAAKASVMAGDCCRTDNGWLQFEELHQRRNNN 240
           T YE EQTK      NC+TLPEESVPIQ AAK+SVM    CRT+N W+QFEELHQ RNNN
Sbjct: 181 TVYE-EQTKNWMPSTNCSTLPEESVPIQGAAKSSVMGEGDCRTENEWIQFEELHQIRNNN 240

Query: 241 NT----FAEKNNNII-----VAPSSLQIMHCAAAPLAGA--------------ASTTTAA 300
            T    FAEKN+N I       P+SLQ+MHC AA L                 A  TT A
Sbjct: 241 TTNNDNFAEKNSNNINNNNNNNPASLQLMHCPAAALRNGSGGGGGGGQLMMNIAPITTTA 300

Query: 301 TVTTILHQKSHHNNNNNNNVGAPFIVGLEEEEEEEISGEE----GEGETLQLFPLCSDTR 359
           TVTTI+H KSH  +N N        VG+  EE EEI GEE    GE ETLQLFPLCS+T 
Sbjct: 301 TVTTIMHPKSHRRSNFNT-------VGV--EESEEIGGEEEEGCGESETLQLFPLCSET- 360

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BLAST of MS021678.1 vs. NCBI nr
Match: XP_016898802.1 (PREDICTED: WUSCHEL-related homeobox 1-like [Cucumis melo])

HSP 1 Score: 436.0 bits (1120), Expect = 3.1e-118
Identity = 264/405 (65.19%), Postives = 287/405 (70.86%), Query Frame = 0


Query: 1   MWMMGYNDGGDSFNFPPD-SFNGRKLRPLIPRPLSSLSPNTSSPSSSSNPLHTNDFFSHF 60
           MWMMGYND  D  NFP D SFN RKLRPLIPRPL          SSSS+  HTNDFFS F
Sbjct: 1   MWMMGYNDAQD-LNFPSDNSFNSRKLRPLIPRPL----------SSSSSSSHTNDFFSQF 60

Query: 61  HHMAT-VGDQSKRELSN------GAPVVVSSRWNPTPEQLRVLEELYRRGTRTPSAEQIQ 120
           HHMAT V DQSKREL+N        PVVVSSRWNPTPEQLRVLEELYRRGTRTPSA+QIQ
Sbjct: 61  HHMATSVADQSKRELNNVLSPSSSPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQ 120

Query: 121 HITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMESAADNSA--AARELQIIEAKDSG 180
           HIT+QLRRYGKIEGKNVFYWFQNHKARERQKRRRQMES+A  +A  +AR+L ++E KDSG
Sbjct: 121 HITSQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMESSAITTADHSARDLDVLERKDSG 180

Query: 181 SGRTAYEVEQTK------NCTTLPEESVPIQRAAKASVMAGDCCRTDNGWLQFEELHQRR 240
           SGRT YE EQTK      NC+TLPEESVPIQ AAK +VM    CRT+NGW+QFEELHQ R
Sbjct: 181 SGRTVYE-EQTKNWVPSTNCSTLPEESVPIQGAAKGNVMGATDCRTENGWIQFEELHQIR 240

Query: 241 NNN---NTFAEK-----------NNNIIVAPSSLQIMHCAAAPLA---------GAASTT 300
           NNN   N FAEK           NNN I  P SLQ++HC  A  A           A  T
Sbjct: 241 NNNTNTNNFAEKDTNNIIIINNNNNNNINNPPSLQLLHCFPATTALRGGSQLMMNIAPIT 300

Query: 301 TAATVTTILHQKSHHNNNNNNNVGAPF-IVGLEEEEEEEISGEE-GEGETLQLFPLCSDT 359
           T ATVTTI+H K H  +NN N +   F ++G+EEE E+E   EE GE ETLQLFPLCSD 
Sbjct: 301 TTATVTTIMHPKCHRRSNNINVISGNFDVIGVEEELEDEEEEEECGESETLQLFPLCSD- 360

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BLAST of MS021678.1 vs. NCBI nr
Match: XP_011660351.2 (WUSCHEL-related homeobox 1 [Cucumis sativus] >KAE8652557.1 hypothetical protein Csa_013314 [Cucumis sativus])

HSP 1 Score: 433.7 bits (1114), Expect = 1.5e-117
Identity = 264/406 (65.02%), Postives = 287/406 (70.69%), Query Frame = 0


Query: 1   MWMMGYNDGGDSFNFPPD-SFNGRKLRPLIPRPLSSLSPNTSSPSSSSNPLHTNDFFSHF 60
           MWMMGYND  D  NFP D SFN RKLRPLIPRPL          SSSS+  HTNDFFS F
Sbjct: 1   MWMMGYNDAQD-LNFPSDNSFNSRKLRPLIPRPL----------SSSSSSSHTNDFFSQF 60

Query: 61  HHMAT-VGDQSKRELSN------GAPVVVSSRWNPTPEQLRVLEELYRRGTRTPSAEQIQ 120
           HHMAT V DQSKREL+N        PVVVSSRWNPTPEQLRVLEELYRRGTRTPSA+QIQ
Sbjct: 61  HHMATSVADQSKRELNNVLSPSSSPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQ 120

Query: 121 HITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMESAADNSA--AARELQIIEAKDSG 180
           HIT+QLRRYGKIEGKNVFYWFQNHKARERQKRRRQMES+A  +A  + R+L ++E KDSG
Sbjct: 121 HITSQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMESSAITTADHSTRDLDVLERKDSG 180

Query: 181 SGRTAYEVEQTK------NCTTLPEESVPIQRAAKASVMAGDCCRTDNGWLQFEELHQRR 240
           SGRT YE EQTK      NC+TLPEESVPIQ AAK +VM    CRT+NGW+QFEELHQ R
Sbjct: 181 SGRTVYE-EQTKNWVPSTNCSTLPEESVPIQGAAKGNVMGATDCRTENGWIQFEELHQIR 240

Query: 241 NNN---NTFAEK---------NNNIIVAPSSLQIMHC--AAAPLAGA-------ASTTTA 300
           NNN   N FAEK         NNN I +P SLQ++HC  A A L G        A  TT 
Sbjct: 241 NNNTNTNNFAEKDTNNIIINNNNNNINSPPSLQLLHCFPATAALRGGSQLMMNIAPITTT 300

Query: 301 ATVTTILHQKSHHNNNNNNNVGAPFIVGLE-----EEEEEEISGEEGEGETLQLFPLCSD 359
           ATVTTI+H K H  +N N   G   ++G+E     EEEEEE   E GE ETLQLFPLCSD
Sbjct: 301 ATVTTIMHPKCHRRSNINVISGNFDVIGVEEELEDEEEEEEEEAECGESETLQLFPLCSD 360

[Close]

BLAST of MS021678.1 vs. NCBI nr
Match: XP_022137573.1 (uncharacterized protein LOC111008990 [Momordica charantia])

HSP 1 Score: 406.8 bits (1044), Expect = 2.0e-109
Identity = 209/211 (99.05%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 148 MESAADNSAAARELQIIEAKDSGSGRTAYEVEQTKNCTTLPEESVPIQRAAKASVMAGDC 207
           MESAADNSAAARELQIIEAKDSGSGRTAYEVEQTKNCTTLPEESVPIQRAAKASVMAGDC
Sbjct: 1   MESAADNSAAARELQIIEAKDSGSGRTAYEVEQTKNCTTLPEESVPIQRAAKASVMAGDC 60

Query: 208 CRTDNGWLQFEELHQRRNNNNTFAEKNNNIIVAPSSLQIMHCAAAPLAGAASTTTAATVT 267
           CRTDNGWLQFEELHQRRNNNNTFAEKNNNIIVA SSLQIMHCAAAPLAG ASTTTAATVT
Sbjct: 61  CRTDNGWLQFEELHQRRNNNNTFAEKNNNIIVASSSLQIMHCAAAPLAGTASTTTAATVT 120

Query: 268 TILHQKSHHNNNNNNNVGAPFIVGLEEEEEEEISGEEGEGETLQLFPLCSDTRISRSRSG 327
           TILHQKSHHNNNNNNNVGAPFIVGLEEEEEEEISGEEGEGETLQLFPLCSDTRISRSRSG
Sbjct: 121 TILHQKSHHNNNNNNNVGAPFIVGLEEEEEEEISGEEGEGETLQLFPLCSDTRISRSRSG 180

Query: 328 EIIGGKTVETSGMNSTNLTPLQFFEFLPLKN 359
           EIIGGKTVETSGMNSTNLTPLQFFEFLPLKN
Sbjct: 181 EIIGGKTVETSGMNSTNLTPLQFFEFLPLKN 211

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BLAST of MS021678.1 vs. NCBI nr
Match: KAG6584322.1 (WUSCHEL-related homeobox 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 367.1 bits (941), Expect = 1.8e-97
Identity = 226/366 (61.75%), Postives = 257/366 (70.22%), Query Frame = 0


Query: 1   MWMMGYNDGGDSFNFPPDSFNGRKLRPLIPRPLSSLSPNTSSPSSSSNPLHTNDFFSHFH 60
           MWMMGYND GD  NFP DSF  R+LRPL+PRPLSSLS +T++ +   N +HTNDFFS FH
Sbjct: 1   MWMMGYNDAGD-LNFPTDSFTPRRLRPLLPRPLSSLS-STAAVNPPFNLIHTNDFFSQFH 60

Query: 61  HMATVGDQSKRELSNG-APVVVSSRWNPTPEQLRVLEELYRRGTRTPSAEQIQHITAQLR 120
           HMATV DQ+KREL+N   PV+VSSRWNPTPEQLRVLEELYRRGTRTPSA+QIQHITAQLR
Sbjct: 61  HMATVTDQNKRELNNAPPPVLVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLR 120

Query: 121 RYGKIEGKNVFYWFQNHKARERQKRRRQMESAADNSAAARELQIIEAKDSGSGRTAYEVE 180
           RYGKIEGKNVFYWFQNHKARERQKRRRQMESA     +ARE  I+E KDSGSGRT YE E
Sbjct: 121 RYGKIEGKNVFYWFQNHKARERQKRRRQMESAITADHSAREAGILERKDSGSGRTVYE-E 180

Query: 181 QTK------NCTTLPEESVPIQRAAKASVMAGDCCRTDNGWLQFEELHQRRNNNNTFAEK 240
           QTK      NCTTLPEES PIQ            C T +GW+QF+ L Q  NNNN     
Sbjct: 181 QTKNWAPSSNCTTLPEESAPIQPPPTP-------CTTHHGWIQFQSLVQ--NNNNAGICS 240

Query: 241 NNNIIVAPSSLQIMHCAAAPLAGAASTTTAATVTTILHQKSHHNNNNNNNVGAPFIVGLE 300
           ++   +     Q+M    AP+    +T  A+TVTTI+H KSH      +N+G     G+E
Sbjct: 241 HSTTALDGGGAQLM-MNTAPI--PTTTAAASTVTTIMHSKSH-----TSNIGGFAPNGVE 300

Query: 301 EEEEEEISGEEGEGETLQLFPLCSDTRISRSRSGEIIGGKT-VETSGMNSTNLTPLQFFE 359
           E EE E      E ETLQLFPLCS+     SR+GEI  GK   ET G +S N+TPLQFFE
Sbjct: 301 ELEESE------EVETLQLFPLCSE-----SRNGEISEGKNGFETVG-SSANMTPLQFFE 334

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BLAST of MS021678.1 vs. ExPASy Swiss-Prot
Match: Q6X7K0 (WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana OX=3702 GN=WOX1 PE=2 SV=2)

HSP 1 Score: 183.7 bits (465), Expect = 3.6e-45
Identity = 155/396 (39.14%), Postives = 204/396 (51.52%), Query Frame = 0


Query: 1   MWMMGYNDGG-DSFNFPPDSFNGRKLRPLIPRPLSSLSPNTSSPSSSSNPLHTNDFFSHF 60
           MW MGYN+GG DSFN       GRKLRPLIPR        TS P+++ N   TN    H 
Sbjct: 1   MWTMGYNEGGADSFN------GGRKLRPLIPR-------LTSCPTAAVN---TNS--DHR 60

Query: 61  HHMATV---GDQSKREL------SNGAPVVVSSRWNPTPEQLRVLEELYRRGTRTPSAEQ 120
            +MA V    +Q+KREL          PV+VSSRWNPTP+QLRVLEELYR+GTRTPSA+ 
Sbjct: 61  FNMAVVTMTAEQNKRELMMLNSEPQHPPVMVSSRWNPTPDQLRVLEELYRQGTRTPSADH 120

Query: 121 IQHITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMESAADNSAAARELQIIEAKDSG 180
           IQ ITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQME+  + +  +    +       
Sbjct: 121 IQQITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMETGHEETVLSTASLVSNHGFDK 180

Query: 181 SGRTAYEVEQTKN------CTTLPEE---SVPIQRAAKASVMAGDCCRTD--------NG 240
                Y+VEQ KN      C T PE+      ++  A   V     C  D        N 
Sbjct: 181 KDPPGYKVEQVKNWICSVGCDTQPEKPSRDYHLEEPANIRVEHNARCGGDERRSFLGINT 240

Query: 241 WLQFEELHQRRNNNNTFAEKNNNIIVAPSSLQIMHCAAAPLAGAASTTTAATVTTILHQK 300
             Q  +L     +++    + N I+ +P+    M  +   ++ +  T T + V     + 
Sbjct: 241 TWQMMQLPPSFYSSSHHHHQRNLILNSPTVSSNMSNSNNAVSASKDTVTVSPVFLRTREA 300

Query: 301 S-----HHNNNNNNNVGAPFIVGLEEEEEEEISGE-EGEGETLQLFPL-----CSDTRIS 359
           +     H N ++N +         +E+ E+  +GE + + +TL+LFPL     CSD    
Sbjct: 301 TNTETCHRNGDDNKD---------QEQHEDCSNGELDHQEQTLELFPLRKEGFCSD---- 350

[Close]

BLAST of MS021678.1 vs. ExPASy Swiss-Prot
Match: Q9ZVF5 (WUSCHEL-related homeobox 6 OS=Arabidopsis thaliana OX=3702 GN=WOX6 PE=2 SV=2)

HSP 1 Score: 123.2 bits (308), Expect = 5.8e-27
Identity = 75/157 (47.77%), Postives = 96/157 (61.15%), Query Frame = 0


Query: 43  PSSSSNP---LHTNDFFSHFHHM---ATVGDQSKRELSNGAPVVVSSRWNPTPEQLRVLE 102
           P S++ P   L   D   + HH    A+ G+    E  N  P   + RWNPTPEQ+  LE
Sbjct: 14  PLSTTQPPLLLTHCDINGNDHHQLITASSGEHDIDERKNNIPAAATLRWNPTPEQITTLE 73

Query: 103 ELYRRGTRTPSAEQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMESAADNSA 162
           ELYR GTRTP+ EQIQ I ++LR+YG+IEGKNVFYWFQNHKARER KRRR+     +  A
Sbjct: 74  ELYRSGTRTPTTEQIQQIASKLRKYGRIEGKNVFYWFQNHKARERLKRRRR-----EGGA 133

Query: 163 AARELQIIEAKDSGSGRTAYEVEQTKNCTTLPEESVP 194
             +  +  + KDS SG   + V+QTK C + P  + P
Sbjct: 134 IIKPHK--DVKDSSSG--GHRVDQTKLCPSFPHTNRP 161

[Close]

BLAST of MS021678.1 vs. ExPASy Swiss-Prot
Match: Q6X7J9 (WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana OX=3702 GN=WOX4 PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 9.5e-22
Identity = 85/227 (37.44%), Postives = 116/227 (51.10%), Query Frame = 0


Query: 19  SFNGRKLRPLIPRPLSSLSPNTSSPSSSSNPLHTNDFFSHFHHMATVGDQSKRELSNGAP 78
           S + ++LRPL P+ LS   P  S PSSSS          +F      G  +K E     P
Sbjct: 24  SLSCKRLRPLAPK-LSGSPP--SPPSSSSGVTSATFDLKNFIRPDQTG-PTKFEHKRDPP 83

Query: 79  VVV-----SSRWNPTPEQLRVLEELYRRGTRTPSAEQIQHITAQLRRYGKIEGKNVFYWF 138
             +      +RWNPT EQ+ +LE LY+ G RTP+A+QI+HIT QL +YGKIEGKNVFYWF
Sbjct: 84  HQLETHPGGTRWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWF 143

Query: 139 QNHKARERQKRRRQMESAADNSAAARELQIIEAKDSGSGRTAYEVEQTKNCTTLPEESVP 198
           QNHKARERQK++R    +    ++     +     +   RT+  ++  +      EE V 
Sbjct: 144 QNHKARERQKQKRNNLISLSCQSSFTTTGVFNPSVTMKTRTSSSLDIMREPMVEKEELVE 203

Query: 199 IQRAAKASVMAGDCCRTDNGW-LQFEELHQRRN-NNNTFAEKNNNII 239
                       +  RT   W  +  E+  RRN N++T A   N II
Sbjct: 204 ----------ENEYKRTCRSWGFENLEIENRRNKNSSTMATTFNKII 236

[Close]

BLAST of MS021678.1 vs. ExPASy Swiss-Prot
Match: Q70UV1 (WUSCHEL-related homeobox 3A OS=Zea mays OX=4577 GN=WOX3A PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.8e-21
Identity = 49/71 (69.01%), Postives = 58/71 (81.69%), Query Frame = 0


Query: 78  PVVVSSRWNPTPEQLRVLEELYRRGTRTPSAEQIQHITAQLRRYGKIEGKNVFYWFQNHK 137
           P   S+RW PTPEQL +LEE+YR G RTP+A +IQ ITA L  YG+IEGKNVFYWFQNHK
Sbjct: 2   PQTPSTRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHK 61

Query: 138 ARERQKRRRQM 149
           ARERQ+ RR++
Sbjct: 62  ARERQRLRRRL 72

[Close]

BLAST of MS021678.1 vs. ExPASy Swiss-Prot
Match: A2ZH47 (WUSCHEL-related homeobox 3 OS=Oryza sativa subsp. indica OX=39946 GN=WOX3 PE=3 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.8e-21
Identity = 49/71 (69.01%), Postives = 58/71 (81.69%), Query Frame = 0


Query: 78  PVVVSSRWNPTPEQLRVLEELYRRGTRTPSAEQIQHITAQLRRYGKIEGKNVFYWFQNHK 137
           P   S+RW PTPEQL +LEE+YR G RTP+A +IQ ITA L  YG+IEGKNVFYWFQNHK
Sbjct: 2   PQTPSTRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHK 61

Query: 138 ARERQKRRRQM 149
           ARERQ+ RR++
Sbjct: 62  ARERQRLRRRL 72

[Close]

BLAST of MS021678.1 vs. ExPASy TrEMBL
Match: A0A1S4DS26 (WUSCHEL-related homeobox 1-like OS=Cucumis melo OX=3656 GN=LOC103501753 PE=3 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 1.5e-118
Identity = 264/405 (65.19%), Postives = 287/405 (70.86%), Query Frame = 0


Query: 1   MWMMGYNDGGDSFNFPPD-SFNGRKLRPLIPRPLSSLSPNTSSPSSSSNPLHTNDFFSHF 60
           MWMMGYND  D  NFP D SFN RKLRPLIPRPL          SSSS+  HTNDFFS F
Sbjct: 1   MWMMGYNDAQD-LNFPSDNSFNSRKLRPLIPRPL----------SSSSSSSHTNDFFSQF 60

Query: 61  HHMAT-VGDQSKRELSN------GAPVVVSSRWNPTPEQLRVLEELYRRGTRTPSAEQIQ 120
           HHMAT V DQSKREL+N        PVVVSSRWNPTPEQLRVLEELYRRGTRTPSA+QIQ
Sbjct: 61  HHMATSVADQSKRELNNVLSPSSSPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQ 120

Query: 121 HITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMESAADNSA--AARELQIIEAKDSG 180
           HIT+QLRRYGKIEGKNVFYWFQNHKARERQKRRRQMES+A  +A  +AR+L ++E KDSG
Sbjct: 121 HITSQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMESSAITTADHSARDLDVLERKDSG 180

Query: 181 SGRTAYEVEQTK------NCTTLPEESVPIQRAAKASVMAGDCCRTDNGWLQFEELHQRR 240
           SGRT YE EQTK      NC+TLPEESVPIQ AAK +VM    CRT+NGW+QFEELHQ R
Sbjct: 181 SGRTVYE-EQTKNWVPSTNCSTLPEESVPIQGAAKGNVMGATDCRTENGWIQFEELHQIR 240

Query: 241 NNN---NTFAEK-----------NNNIIVAPSSLQIMHCAAAPLA---------GAASTT 300
           NNN   N FAEK           NNN I  P SLQ++HC  A  A           A  T
Sbjct: 241 NNNTNTNNFAEKDTNNIIIINNNNNNNINNPPSLQLLHCFPATTALRGGSQLMMNIAPIT 300

Query: 301 TAATVTTILHQKSHHNNNNNNNVGAPF-IVGLEEEEEEEISGEE-GEGETLQLFPLCSDT 359
           T ATVTTI+H K H  +NN N +   F ++G+EEE E+E   EE GE ETLQLFPLCSD 
Sbjct: 301 TTATVTTIMHPKCHRRSNNINVISGNFDVIGVEEELEDEEEEEECGESETLQLFPLCSD- 360

[Close]

BLAST of MS021678.1 vs. ExPASy TrEMBL
Match: A0A0A0LVV6 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042780 PE=3 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 3.3e-118
Identity = 264/403 (65.51%), Postives = 287/403 (71.22%), Query Frame = 0


Query: 1   MWMMGYNDGGDSFNFPPD-SFNGRKLRPLIPRPLSSLSPNTSSPSSSSNPLHTNDFFSHF 60
           MWMMGYND  D  NFP D SFN RKLRPLIPRPL          SSSS+  HTNDFFS F
Sbjct: 1   MWMMGYNDAQD-LNFPSDNSFNSRKLRPLIPRPL----------SSSSSSSHTNDFFSQF 60

Query: 61  HHMAT-VGDQSKRELSN------GAPVVVSSRWNPTPEQLRVLEELYRRGTRTPSAEQIQ 120
           HHMAT V DQSKREL+N        PVVVSSRWNPTPEQLRVLEELYRRGTRTPSA+QIQ
Sbjct: 61  HHMATSVADQSKRELNNVLSPSSSPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQ 120

Query: 121 HITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMESAADNSA--AARELQIIEAKDSG 180
           HIT+QLRRYGKIEGKNVFYWFQNHKARERQKRRRQMES+A  +A  + R+L ++E KDSG
Sbjct: 121 HITSQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMESSAITTADHSTRDLDVLERKDSG 180

Query: 181 SGRTAYEVEQTK------NCTTLPEESVPIQRAAKASVMAGDCCRTDNGWLQFEELHQRR 240
           SGRT YE EQTK      NC+TLPEESVPIQ AAK +VM    CRT+NGW+QFEELHQ R
Sbjct: 181 SGRTVYE-EQTKNWVPSTNCSTLPEESVPIQGAAKGNVMGATDCRTENGWIQFEELHQIR 240

Query: 241 NNN---NTFAEK---------NNNIIVAPSSLQIMHC--AAAPLAGA-------ASTTTA 300
           NNN   N FAEK         NNN I +P SLQ++HC  A A L G        A  TT 
Sbjct: 241 NNNTNTNNFAEKDTNNIIINNNNNNINSPPSLQLLHCFPATAALRGGSQLMMNIAPITTT 300

Query: 301 ATVTTILHQKSHHNNNNNNNVGAPFIVGLEE--EEEEEISGEEGEGETLQLFPLCSDTRI 359
           ATVTTI+H K H  +N N   G   ++G+EE  EEEEE   E GE ETLQLFPLCSD   
Sbjct: 301 ATVTTIMHPKCHRRSNINVISGNFDVIGVEEELEEEEEEEAECGESETLQLFPLCSD--- 360

[Close]

BLAST of MS021678.1 vs. ExPASy TrEMBL
Match: A0A6J1CAP6 (uncharacterized protein LOC111008990 OS=Momordica charantia OX=3673 GN=LOC111008990 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 9.7e-110
Identity = 209/211 (99.05%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 148 MESAADNSAAARELQIIEAKDSGSGRTAYEVEQTKNCTTLPEESVPIQRAAKASVMAGDC 207
           MESAADNSAAARELQIIEAKDSGSGRTAYEVEQTKNCTTLPEESVPIQRAAKASVMAGDC
Sbjct: 1   MESAADNSAAARELQIIEAKDSGSGRTAYEVEQTKNCTTLPEESVPIQRAAKASVMAGDC 60

Query: 208 CRTDNGWLQFEELHQRRNNNNTFAEKNNNIIVAPSSLQIMHCAAAPLAGAASTTTAATVT 267
           CRTDNGWLQFEELHQRRNNNNTFAEKNNNIIVA SSLQIMHCAAAPLAG ASTTTAATVT
Sbjct: 61  CRTDNGWLQFEELHQRRNNNNTFAEKNNNIIVASSSLQIMHCAAAPLAGTASTTTAATVT 120

Query: 268 TILHQKSHHNNNNNNNVGAPFIVGLEEEEEEEISGEEGEGETLQLFPLCSDTRISRSRSG 327
           TILHQKSHHNNNNNNNVGAPFIVGLEEEEEEEISGEEGEGETLQLFPLCSDTRISRSRSG
Sbjct: 121 TILHQKSHHNNNNNNNVGAPFIVGLEEEEEEEISGEEGEGETLQLFPLCSDTRISRSRSG 180

Query: 328 EIIGGKTVETSGMNSTNLTPLQFFEFLPLKN 359
           EIIGGKTVETSGMNSTNLTPLQFFEFLPLKN
Sbjct: 181 EIIGGKTVETSGMNSTNLTPLQFFEFLPLKN 211

[Close]

BLAST of MS021678.1 vs. ExPASy TrEMBL
Match: A0A6J1KJ87 (WUSCHEL-related homeobox 1-like OS=Cucurbita maxima OX=3661 GN=LOC111495730 PE=3 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 9.4e-97
Identity = 231/381 (60.63%), Postives = 254/381 (66.67%), Query Frame = 0


Query: 1   MWMMGYNDGGDSFNFPPDSFNGRKLRPLIPRPLSSLSPNTSSPSSSSNPLHTNDFFSHFH 60
           MWMMGYND GD  NFP DSF  R+LRPL+PRPLSSLS +T++ +   N +HTNDFFS FH
Sbjct: 1   MWMMGYNDAGD-LNFPADSFTPRRLRPLLPRPLSSLS-STAAVNPPFNLIHTNDFFSQFH 60

Query: 61  HMATVGDQSKRELSNG-APVVVSSRWNPTPEQLRVLEELYRRGTRTPSAEQIQHITAQLR 120
           HMATV DQ+KREL+N   PVVVSSRWNPTPEQLRVLEELYRRGTRTPSA+QIQHITAQLR
Sbjct: 61  HMATVTDQTKRELNNAPPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLR 120

Query: 121 RYGKIEGKNVFYWFQNHKARERQKRRRQMESAADNSAAARELQIIEAKDSGSGRTAYEVE 180
           RYGKIEGKNVFYWFQNHKARERQKRRRQMESA     +ARE  I+E KDSGSGRT YE E
Sbjct: 121 RYGKIEGKNVFYWFQNHKARERQKRRRQMESAITADHSAREPGILERKDSGSGRTVYE-E 180

Query: 181 QTK------NCTTLPEESVPIQRAAKASVMAGDCCRTDNGWLQFEELHQRRNNNNTFAEK 240
           QTK      NCTTLPEES PIQ                 GW+QF+   Q   NNN     
Sbjct: 181 QTKNWAPSSNCTTLPEESAPIQ-----------------GWIQFQGFVQNDTNNN----- 240

Query: 241 NNNIIVAPSSLQIMHCA---------------AAPLAGAASTTTAATVTTILHQKSHHNN 300
           NNN     SSL  MH                  AP+    +TT  ATVTTI+H KSH   
Sbjct: 241 NNN--PPSSSLHFMHSPPTTALDGGEAQLMMNTAPI--PTTTTATATVTTIMHSKSH--- 300

Query: 301 NNNNNVGAPFIVGLEEEEEEEISGEEGEGETLQLFPLCSDTRISRSRSGEIIGGKT-VET 359
              +N+G     G+EE EE E      E ETLQLFPLCSD     SR+GEI  GK   ET
Sbjct: 301 ---SNIGGFAPNGVEELEESE------EAETLQLFPLCSD-----SRNGEISEGKNGFET 334

[Close]

BLAST of MS021678.1 vs. ExPASy TrEMBL
Match: A0A6J1E6X5 (WUSCHEL-related homeobox 1-like OS=Cucurbita moschata OX=3662 GN=LOC111431341 PE=3 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 2.1e-96
Identity = 227/370 (61.35%), Postives = 256/370 (69.19%), Query Frame = 0


Query: 1   MWMMGYNDGGDSFNFPPDSFNGRKLRPLIPRPLSSLSPNTSSPSSSSNPLHTNDFFSHFH 60
           MWMMGYND GD  NFP DSF  R+LRPL+PRPLSSLS +T++ +   N +HTNDFFS FH
Sbjct: 1   MWMMGYNDAGD-LNFPTDSFTPRRLRPLLPRPLSSLS-STAAVNPPFNLIHTNDFFSQFH 60

Query: 61  HMATVGDQSKRELSNG-APVVVSSRWNPTPEQLRVLEELYRRGTRTPSAEQIQHITAQLR 120
           HMATV DQ+KREL+N   PVVVSSRWNPTPEQLRVLEELYRRGTRTPSA+QIQHITAQLR
Sbjct: 61  HMATVTDQTKRELNNAPPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLR 120

Query: 121 RYGKIEGKNVFYWFQNHKARERQKRRRQMESAADNSAAARELQIIEAKDSGSGRTAYEVE 180
           RYGKIEGKNVFYWFQNHKARERQKRRRQMESA     +A E  I+E KDSGSGRT YE E
Sbjct: 121 RYGKIEGKNVFYWFQNHKARERQKRRRQMESAITADHSAPEPGILERKDSGSGRTVYE-E 180

Query: 181 QTK------NCTTLPEESVPIQRAAKASVMAGDCCRTDNGWLQFEELHQRRNNNNTFAEK 240
           QTK      NCTTLPEES PIQ            C T  GW+QF+ L Q   NNN     
Sbjct: 181 QTKNWAPSSNCTTLPEESAPIQPPPTP-------CTTHRGWIQFQSLVQ---NNNNPPSS 240

Query: 241 NNNIIVAPSSLQIMHCAAAPLAGAA--STTTAA--TVTTILHQKSHHNNNNNNNVGAPFI 300
           + + + +P +  +    A  +   A   TTTAA  TVTTI+H KSH      +N+G    
Sbjct: 241 SLHFMHSPPTTALDGGGAQLMMNTAPIPTTTAATSTVTTIMHSKSH------SNIGGFAP 300

Query: 301 VGLEEEEEEEISGEEGEGETLQLFPLCSDTRISRSRSGEIIGGKT-VETSGMNSTNLTPL 359
            G+EE EE E      E ETLQLFPLCS+     SR+GEI  GK   ET G +S N+TPL
Sbjct: 301 NGVEELEESE------EAETLQLFPLCSE-----SRNGEISEGKNGFETVG-SSANITPL 339

[Close]

BLAST of MS021678.1 vs. TAIR 10
Match: AT3G18010.1 (WUSCHEL related homeobox 1 )

HSP 1 Score: 183.7 bits (465), Expect = 2.6e-46
Identity = 155/396 (39.14%), Postives = 204/396 (51.52%), Query Frame = 0


Query: 1   MWMMGYNDGG-DSFNFPPDSFNGRKLRPLIPRPLSSLSPNTSSPSSSSNPLHTNDFFSHF 60
           MW MGYN+GG DSFN       GRKLRPLIPR        TS P+++ N   TN    H 
Sbjct: 1   MWTMGYNEGGADSFN------GGRKLRPLIPR-------LTSCPTAAVN---TNS--DHR 60

Query: 61  HHMATV---GDQSKREL------SNGAPVVVSSRWNPTPEQLRVLEELYRRGTRTPSAEQ 120
            +MA V    +Q+KREL          PV+VSSRWNPTP+QLRVLEELYR+GTRTPSA+ 
Sbjct: 61  FNMAVVTMTAEQNKRELMMLNSEPQHPPVMVSSRWNPTPDQLRVLEELYRQGTRTPSADH 120

Query: 121 IQHITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMESAADNSAAARELQIIEAKDSG 180
           IQ ITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQME+  + +  +    +       
Sbjct: 121 IQQITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMETGHEETVLSTASLVSNHGFDK 180

Query: 181 SGRTAYEVEQTKN------CTTLPEE---SVPIQRAAKASVMAGDCCRTD--------NG 240
                Y+VEQ KN      C T PE+      ++  A   V     C  D        N 
Sbjct: 181 KDPPGYKVEQVKNWICSVGCDTQPEKPSRDYHLEEPANIRVEHNARCGGDERRSFLGINT 240

Query: 241 WLQFEELHQRRNNNNTFAEKNNNIIVAPSSLQIMHCAAAPLAGAASTTTAATVTTILHQK 300
             Q  +L     +++    + N I+ +P+    M  +   ++ +  T T + V     + 
Sbjct: 241 TWQMMQLPPSFYSSSHHHHQRNLILNSPTVSSNMSNSNNAVSASKDTVTVSPVFLRTREA 300

Query: 301 S-----HHNNNNNNNVGAPFIVGLEEEEEEEISGE-EGEGETLQLFPL-----CSDTRIS 359
           +     H N ++N +         +E+ E+  +GE + + +TL+LFPL     CSD    
Sbjct: 301 TNTETCHRNGDDNKD---------QEQHEDCSNGELDHQEQTLELFPLRKEGFCSD---- 350

[Close]

BLAST of MS021678.1 vs. TAIR 10
Match: AT2G01500.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 123.2 bits (308), Expect = 4.1e-28
Identity = 75/157 (47.77%), Postives = 96/157 (61.15%), Query Frame = 0


Query: 43  PSSSSNP---LHTNDFFSHFHHM---ATVGDQSKRELSNGAPVVVSSRWNPTPEQLRVLE 102
           P S++ P   L   D   + HH    A+ G+    E  N  P   + RWNPTPEQ+  LE
Sbjct: 14  PLSTTQPPLLLTHCDINGNDHHQLITASSGEHDIDERKNNIPAAATLRWNPTPEQITTLE 73

Query: 103 ELYRRGTRTPSAEQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMESAADNSA 162
           ELYR GTRTP+ EQIQ I ++LR+YG+IEGKNVFYWFQNHKARER KRRR+     +  A
Sbjct: 74  ELYRSGTRTPTTEQIQQIASKLRKYGRIEGKNVFYWFQNHKARERLKRRRR-----EGGA 133

Query: 163 AARELQIIEAKDSGSGRTAYEVEQTKNCTTLPEESVP 194
             +  +  + KDS SG   + V+QTK C + P  + P
Sbjct: 134 IIKPHK--DVKDSSSG--GHRVDQTKLCPSFPHTNRP 161

[Close]

BLAST of MS021678.1 vs. TAIR 10
Match: AT1G46480.1 (WUSCHEL related homeobox 4 )

HSP 1 Score: 105.9 bits (263), Expect = 6.8e-23
Identity = 85/227 (37.44%), Postives = 116/227 (51.10%), Query Frame = 0


Query: 19  SFNGRKLRPLIPRPLSSLSPNTSSPSSSSNPLHTNDFFSHFHHMATVGDQSKRELSNGAP 78
           S + ++LRPL P+ LS   P  S PSSSS          +F      G  +K E     P
Sbjct: 24  SLSCKRLRPLAPK-LSGSPP--SPPSSSSGVTSATFDLKNFIRPDQTG-PTKFEHKRDPP 83

Query: 79  VVV-----SSRWNPTPEQLRVLEELYRRGTRTPSAEQIQHITAQLRRYGKIEGKNVFYWF 138
             +      +RWNPT EQ+ +LE LY+ G RTP+A+QI+HIT QL +YGKIEGKNVFYWF
Sbjct: 84  HQLETHPGGTRWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWF 143

Query: 139 QNHKARERQKRRRQMESAADNSAAARELQIIEAKDSGSGRTAYEVEQTKNCTTLPEESVP 198
           QNHKARERQK++R    +    ++     +     +   RT+  ++  +      EE V 
Sbjct: 144 QNHKARERQKQKRNNLISLSCQSSFTTTGVFNPSVTMKTRTSSSLDIMREPMVEKEELVE 203

Query: 199 IQRAAKASVMAGDCCRTDNGW-LQFEELHQRRN-NNNTFAEKNNNII 239
                       +  RT   W  +  E+  RRN N++T A   N II
Sbjct: 204 ----------ENEYKRTCRSWGFENLEIENRRNKNSSTMATTFNKII 236

[Close]

BLAST of MS021678.1 vs. TAIR 10
Match: AT2G28610.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 103.6 bits (257), Expect = 3.4e-22
Identity = 52/88 (59.09%), Postives = 64/88 (72.73%), Query Frame = 0


Query: 80  VVSSRWNPTPEQLRVLEELYRRGTRTPSAEQIQHITAQLRRYGKIEGKNVFYWFQNHKAR 139
           V S+RW PTPEQL +LEE+YR G RTP+A QIQ ITA L  YG+IEGKNVFYWFQNHKAR
Sbjct: 4   VASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKAR 63

Query: 140 ERQKRRRQMESAADNSAAARELQIIEAK 168
           +RQK R+++           +LQ+ + K
Sbjct: 64  DRQKLRKKLAKQLHQQQHQLQLQLQQIK 91

[Close]

BLAST of MS021678.1 vs. TAIR 10
Match: AT5G59340.1 (WUSCHEL related homeobox 2 )

HSP 1 Score: 101.3 bits (251), Expect = 1.7e-21
Identity = 46/66 (69.70%), Postives = 57/66 (86.36%), Query Frame = 0


Query: 82  SSRWNPTPEQLRVLEELYRRGTRTPSAEQIQHITAQLRRYGKIEGKNVFYWFQNHKARER 141
           SSRWNPT +Q+ +LE LY+ G RTPSA+QIQ IT +LR YG IEGKNVFYWFQNHKAR+R
Sbjct: 12  SSRWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHKARQR 71

Query: 142 QKRRRQ 148
           QK++++
Sbjct: 72  QKQKQE 77

The following BLAST results are available for this feature:

BLAST of MS021678.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893790.1	1.8e-118	65.67	WUSCHEL-related homeobox 1-like [Benincasa hispida]	[more]
XP_016898802.1	3.1e-118	65.19	PREDICTED: WUSCHEL-related homeobox 1-like [Cucumis melo]	[more]
XP_011660351.2	1.5e-117	65.02	WUSCHEL-related homeobox 1 [Cucumis sativus] >KAE8652557.1 hypothetical protein ...	[more]
XP_022137573.1	2.0e-109	99.05	uncharacterized protein LOC111008990 [Momordica charantia]	[more]
KAG6584322.1	1.8e-97	61.75	WUSCHEL-related homeobox 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of MS021678.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6X7K0	3.6e-45	39.14	WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana OX=3702 GN=WOX1 PE=2 SV=2	[more]
Q9ZVF5	5.8e-27	47.77	WUSCHEL-related homeobox 6 OS=Arabidopsis thaliana OX=3702 GN=WOX6 PE=2 SV=2	[more]
Q6X7J9	9.5e-22	37.44	WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana OX=3702 GN=WOX4 PE=1 SV=1	[more]
Q70UV1	2.8e-21	69.01	WUSCHEL-related homeobox 3A OS=Zea mays OX=4577 GN=WOX3A PE=2 SV=1	[more]
A2ZH47	2.8e-21	69.01	WUSCHEL-related homeobox 3 OS=Oryza sativa subsp. indica OX=39946 GN=WOX3 PE=3 S...	[more]

BLAST of MS021678.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DS26	1.5e-118	65.19	WUSCHEL-related homeobox 1-like OS=Cucumis melo OX=3656 GN=LOC103501753 PE=3 SV=...	[more]
A0A0A0LVV6	3.3e-118	65.51	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042780 PE...	[more]
A0A6J1CAP6	9.7e-110	99.05	uncharacterized protein LOC111008990 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]
A0A6J1KJ87	9.4e-97	60.63	WUSCHEL-related homeobox 1-like OS=Cucurbita maxima OX=3661 GN=LOC111495730 PE=3...	[more]
A0A6J1E6X5	2.1e-96	61.35	WUSCHEL-related homeobox 1-like OS=Cucurbita moschata OX=3662 GN=LOC111431341 PE...	[more]

BLAST of MS021678.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18010.1	2.6e-46	39.14	WUSCHEL related homeobox 1	[more]
AT2G01500.1	4.1e-28	47.77	Homeodomain-like superfamily protein	[more]
AT1G46480.1	6.8e-23	37.44	WUSCHEL related homeobox 4	[more]
AT2G28610.1	3.4e-22	59.09	Homeodomain-like superfamily protein	[more]
AT5G59340.1	1.7e-21	69.70	WUSCHEL related homeobox 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 80..147 e-value: 1.8E-5 score: 34.2
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 83..142 e-value: 8.0E-20 score: 70.5
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 88..143 score: 11.191376
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 84..144 e-value: 3.95059E-7 score: 44.5417
None	No IPR available	GENE3D	1.10.10.60		coord: 81..143 e-value: 4.3E-10 score: 41.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..53
None	No IPR available	PANTHER	PTHR45940:SF13	WUSCHEL-RELATED HOMEOBOX 1-RELATED	coord: 42..358
IPR044555	Protein WUSCHEL-like	PANTHER	PTHR45940	WUSCHEL-RELATED HOMEOBOX 1-RELATED	coord: 42..358
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 83..149

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS021678	MS021678	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS021678.1-cds	MS021678.1-cds-scaffold348:265683..266189	CDS
MS021678.1-cds	MS021678.1-cds-scaffold348:267373..267431	CDS
MS021678.1-cds	MS021678.1-cds-scaffold348:267986..268306	CDS
MS021678.1-cds	MS021678.1-cds-scaffold348:268385..268571	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS021678.1	MS021678.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0099402	plant organ development
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity