MS021658.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS021658.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	non-specific lipid-transfer protein 2-like
Location	scaffold348: 135697 .. 135966 (-)
Sequence length	270
RNA-Seq Expression	MS021658.1
Synteny	MS021658.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGCATCACAGATTGCACTGAGCATCTTGGTGATGTTTATCATGGTGGAGGTCTCAGTGGCAGTGACTTGCAGTCCAGTGCAACTGAGCTCCTGTGTGAGTGCAATTACATCTGCAGTTCCACCTTCTAAGCTCTGCTGCTCTAAGATTAAGGAACAGAAACCCTGCCTCTGCAAGTACATGCAGAACCCCACCCTCAAGAAGTTTGTGGACTCTCCCAATGCCAGGAAAGTTGCTAACACCTGTGGAACTCCATTTCCCAAGTGC

mRNA sequence

ATGAAGGCATCACAGATTGCACTGAGCATCTTGGTGATGTTTATCATGGTGGAGGTCTCAGTGGCAGTGACTTGCAGTCCAGTGCAACTGAGCTCCTGTGTGAGTGCAATTACATCTGCAGTTCCACCTTCTAAGCTCTGCTGCTCTAAGATTAAGGAACAGAAACCCTGCCTCTGCAAGTACATGCAGAACCCCACCCTCAAGAAGTTTGTGGACTCTCCCAATGCCAGGAAAGTTGCTAACACCTGTGGAACTCCATTTCCCAAGTGC

Coding sequence (CDS)

ATGAAGGCATCACAGATTGCACTGAGCATCTTGGTGATGTTTATCATGGTGGAGGTCTCAGTGGCAGTGACTTGCAGTCCAGTGCAACTGAGCTCCTGTGTGAGTGCAATTACATCTGCAGTTCCACCTTCTAAGCTCTGCTGCTCTAAGATTAAGGAACAGAAACCCTGCCTCTGCAAGTACATGCAGAACCCCACCCTCAAGAAGTTTGTGGACTCTCCCAATGCCAGGAAAGTTGCTAACACCTGTGGAACTCCATTTCCCAAGTGC

Protein sequence

MKASQIALSILVMFIMVEVSVAVTCSPVQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVDSPNARKVANTCGTPFPKC

Homology

[Close]

BLAST of MS021658.1 vs. NCBI nr
Match: KAG6572947.1 (hypothetical protein SDJN03_26834, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 165.6 bits (418), Expect = 1.9e-37
Identity = 82/90 (91.11%), Postives = 89/90 (98.89%), Query Frame = 0


Query: 1  MKASQIALSILVMFIMVEVSVAVTCSPVQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCK 60
          MKASQIA+S++VMF+M+EV VAVTCSPVQLSSCVSAITS+VPPSKLCCSKIKEQKPCLCK
Sbjct: 1  MKASQIAVSMMVMFMMMEVCVAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60

Query: 61 YMQNPTLKKFVDSPNARKVANTCGTPFPKC 91
          YMQNPTLKKFVDSPNAR+VANTCGTPFPKC
Sbjct: 61 YMQNPTLKKFVDSPNARRVANTCGTPFPKC 90

[Close]

BLAST of MS021658.1 vs. NCBI nr
Match: XP_022923700.1 (non-specific lipid-transfer protein 2-like [Cucurbita moschata] >XP_023519179.1 non-specific lipid-transfer protein 2-like [Cucurbita pepo subsp. pepo] >KAG6584342.1 hypothetical protein SDJN03_20274, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 164.9 bits (416), Expect = 3.3e-37
Identity = 83/90 (92.22%), Postives = 88/90 (97.78%), Query Frame = 0


Query: 1  MKASQIALSILVMFIMVEVSVAVTCSPVQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCK 60
          MKASQIA+SILVMF+M EVSVAVTCSP+QLSSCVSAITS+VPPSKLCCSKIKEQKPCLCK
Sbjct: 1  MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60

Query: 61 YMQNPTLKKFVDSPNARKVANTCGTPFPKC 91
          YMQNPTL+KFV SPNARKVANTCGTPFPKC
Sbjct: 61 YMQNPTLRKFVASPNARKVANTCGTPFPKC 90

[Close]

BLAST of MS021658.1 vs. NCBI nr
Match: XP_004137484.1 (non-specific lipid-transfer protein 2 [Cucumis sativus])

HSP 1 Score: 164.1 bits (414), Expect = 5.7e-37
Identity = 82/90 (91.11%), Postives = 88/90 (97.78%), Query Frame = 0


Query: 1  MKASQIALSILVMFIMVEVSVAVTCSPVQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCK 60
          MKASQIALSI+VMF+ VE+++AVTCSPVQLSSCVSAITS+VPPSKLCCSKIKEQKPCLCK
Sbjct: 1  MKASQIALSIIVMFMTVEITMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60

Query: 61 YMQNPTLKKFVDSPNARKVANTCGTPFPKC 91
          YMQNPTLKKFV SPNARKVANTCGTPFPKC
Sbjct: 61 YMQNPTLKKFVASPNARKVANTCGTPFPKC 90

[Close]

BLAST of MS021658.1 vs. NCBI nr
Match: XP_023000838.1 (probable non-specific lipid-transfer protein AKCS9 [Cucurbita maxima])

HSP 1 Score: 163.7 bits (413), Expect = 7.4e-37
Identity = 82/90 (91.11%), Postives = 88/90 (97.78%), Query Frame = 0


Query: 1   MKASQIALSILVMFIMVEVSVAVTCSPVQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCK 60
           MKASQIA++ILVMF+M EVSVAVTCSP+QLSSCVSAITS+VPPSKLCCSKIKEQKPCLCK
Sbjct: 51  MKASQIAVTILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 110

Query: 61  YMQNPTLKKFVDSPNARKVANTCGTPFPKC 91
           YMQNPTL+KFV SPNARKVANTCGTPFPKC
Sbjct: 111 YMQNPTLRKFVASPNARKVANTCGTPFPKC 140

[Close]

BLAST of MS021658.1 vs. NCBI nr
Match: TYJ99011.1 (non-specific lipid-transfer protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 161.4 bits (407), Expect = 3.7e-36
Identity = 80/90 (88.89%), Postives = 88/90 (97.78%), Query Frame = 0


Query: 1  MKASQIALSILVMFIMVEVSVAVTCSPVQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCK 60
          MKASQIALSI+VMF+MVE+S+AVTCSPVQLSSCVSAITS+VPPS LCCSKIKEQ+PCLCK
Sbjct: 1  MKASQIALSIIVMFMMVEISMAVTCSPVQLSSCVSAITSSVPPSSLCCSKIKEQRPCLCK 60

Query: 61 YMQNPTLKKFVDSPNARKVANTCGTPFPKC 91
          YMQNPTLKKFV SPNA+KVA+TCGTPFPKC
Sbjct: 61 YMQNPTLKKFVASPNAKKVASTCGTPFPKC 90

[Close]

BLAST of MS021658.1 vs. ExPASy Swiss-Prot
Match: P82353 (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 7.2e-19
Identity = 39/68 (57.35%), Postives = 53/68 (77.94%), Query Frame = 0


Query: 23 VTCSPVQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVDSPNARKVANT 82
          VTCSPVQLS C+  I S  P    CC K++EQ+PCLC Y++NP+L+++V+SPNARK+A+ 
Sbjct: 1  VTCSPVQLSPCLGPINSGAPSPTTCCQKLREQRPCLCGYLKNPSLRQYVNSPNARKLASN 60

Query: 83 CGTPFPKC 91
          CG P P+C
Sbjct: 61 CGVPVPQC 68

[Close]

BLAST of MS021658.1 vs. ExPASy Swiss-Prot
Match: Q43681 (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.2e-18
Identity = 45/93 (48.39%), Postives = 65/93 (69.89%), Query Frame = 0


Query: 1  MKASQIALSILVMFIMVE---VSVAVTCSPVQLSSCVSAITSAVPPSKLCCSKIKEQKPC 60
          MK S +   ++V   +++   V+ AVTC+P +LSSCV AIT    PS  CCSK+K Q+PC
Sbjct: 7  MKMSVVCAVVVVALFLIDVGPVAEAVTCNPTELSSCVPAITGGSKPSSTCCSKLKVQEPC 66

Query: 61 LCKYMQNPTLKKFVDSPNARKVANTCGTPFPKC 91
          LC Y++NP+LK++V+SP A+KV + CG  +P C
Sbjct: 67 LCNYIKNPSLKQYVNSPGAKKVLSNCGVTYPNC 99

[Close]

BLAST of MS021658.1 vs. ExPASy Swiss-Prot
Match: P86809 (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=278110 PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 8.8e-17
Identity = 40/67 (59.70%), Postives = 51/67 (76.12%), Query Frame = 0


Query: 24 TCSPVQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVDSPNARKVANTC 83
          TCS VQLS C++AIT   PPS  CC+K+KEQKPCLC Y+++P LK +V+SP ARK A++C
Sbjct: 2  TCSAVQLSPCLAAITKNTPPSAACCNKLKEQKPCLCGYLKDPNLKNYVNSPGARKTASSC 61

Query: 84 GTPFPKC 91
          G    KC
Sbjct: 62 GVAL-KC 67

[Close]

BLAST of MS021658.1 vs. ExPASy Swiss-Prot
Match: P82901 (Non-specific lipid-transfer protein 2P OS=Triticum aestivum OX=4565 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.0e-09
Identity = 27/66 (40.91%), Postives = 39/66 (59.09%), Query Frame = 0


Query: 25 CSPVQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVDSPNARKVANTCG 84
          C   QL+ C SAI S   PS  CC  ++ Q+PC C+Y ++PT  +++ SP+AR    +CG
Sbjct: 2  CQASQLAVCASAILSGAKPSGECCGNLRAQQPCFCQYAKDPTYGQYIRSPHARDTLQSCG 61

Query: 85 TPFPKC 91
             P C
Sbjct: 62 LAVPHC 67

[Close]

BLAST of MS021658.1 vs. ExPASy Swiss-Prot
Match: A2XBN5 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=LTP-2 PE=3 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 2.3e-09
Identity = 25/67 (37.31%), Postives = 41/67 (61.19%), Query Frame = 0


Query: 24 TCSPVQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVDSPNARKVANTC 83
          +C+  QL+ C  AI     P+  CCS ++ Q+ C C++ ++P   ++V+SPNARK  ++C
Sbjct: 29 SCNAGQLTVCAGAIAGGARPTAACCSSLRAQQGCFCQFAKDPRYGRYVNSPNARKAVSSC 88

Query: 84 GTPFPKC 91
          G   P C
Sbjct: 89 GIALPTC 95

[Close]

BLAST of MS021658.1 vs. ExPASy TrEMBL
Match: A0A6J1ECM2 (non-specific lipid-transfer protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111431330 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.6e-37
Identity = 83/90 (92.22%), Postives = 88/90 (97.78%), Query Frame = 0


Query: 1  MKASQIALSILVMFIMVEVSVAVTCSPVQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCK 60
          MKASQIA+SILVMF+M EVSVAVTCSP+QLSSCVSAITS+VPPSKLCCSKIKEQKPCLCK
Sbjct: 1  MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60

Query: 61 YMQNPTLKKFVDSPNARKVANTCGTPFPKC 91
          YMQNPTL+KFV SPNARKVANTCGTPFPKC
Sbjct: 61 YMQNPTLRKFVASPNARKVANTCGTPFPKC 90

[Close]

BLAST of MS021658.1 vs. ExPASy TrEMBL
Match: A0A0A0LVT5 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042560 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.7e-37
Identity = 82/90 (91.11%), Postives = 88/90 (97.78%), Query Frame = 0


Query: 1  MKASQIALSILVMFIMVEVSVAVTCSPVQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCK 60
          MKASQIALSI+VMF+ VE+++AVTCSPVQLSSCVSAITS+VPPSKLCCSKIKEQKPCLCK
Sbjct: 1  MKASQIALSIIVMFMTVEITMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60

Query: 61 YMQNPTLKKFVDSPNARKVANTCGTPFPKC 91
          YMQNPTLKKFV SPNARKVANTCGTPFPKC
Sbjct: 61 YMQNPTLKKFVASPNARKVANTCGTPFPKC 90

[Close]

BLAST of MS021658.1 vs. ExPASy TrEMBL
Match: A0A6J1KNT4 (probable non-specific lipid-transfer protein AKCS9 OS=Cucurbita maxima OX=3661 GN=LOC111495166 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 3.6e-37
Identity = 82/90 (91.11%), Postives = 88/90 (97.78%), Query Frame = 0


Query: 1   MKASQIALSILVMFIMVEVSVAVTCSPVQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCK 60
           MKASQIA++ILVMF+M EVSVAVTCSP+QLSSCVSAITS+VPPSKLCCSKIKEQKPCLCK
Sbjct: 51  MKASQIAVTILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 110

Query: 61  YMQNPTLKKFVDSPNARKVANTCGTPFPKC 91
           YMQNPTL+KFV SPNARKVANTCGTPFPKC
Sbjct: 111 YMQNPTLRKFVASPNARKVANTCGTPFPKC 140

[Close]

BLAST of MS021658.1 vs. ExPASy TrEMBL
Match: A0A5D3BJV8 (Non-specific lipid-transfer protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002150 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.8e-36
Identity = 80/90 (88.89%), Postives = 88/90 (97.78%), Query Frame = 0


Query: 1  MKASQIALSILVMFIMVEVSVAVTCSPVQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCK 60
          MKASQIALSI+VMF+MVE+S+AVTCSPVQLSSCVSAITS+VPPS LCCSKIKEQ+PCLCK
Sbjct: 1  MKASQIALSIIVMFMMVEISMAVTCSPVQLSSCVSAITSSVPPSSLCCSKIKEQRPCLCK 60

Query: 61 YMQNPTLKKFVDSPNARKVANTCGTPFPKC 91
          YMQNPTLKKFV SPNA+KVA+TCGTPFPKC
Sbjct: 61 YMQNPTLKKFVASPNAKKVASTCGTPFPKC 90

[Close]

BLAST of MS021658.1 vs. ExPASy TrEMBL
Match: V7C3M6 (AAI domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_004G154200g PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 8.5e-31
Identity = 72/92 (78.26%), Postives = 83/92 (90.22%), Query Frame = 0


Query: 1  MKASQIALSILVMFIM--VEVSVAVTCSPVQLSSCVSAITSAVPPSKLCCSKIKEQKPCL 60
          MKA+ IAL  LV+ ++  V+VS+AVTCSPVQLSSCVSAITS+ PPS LCCSKIKEQKPCL
Sbjct: 1  MKAAHIALCTLVVLLVAEVQVSMAVTCSPVQLSSCVSAITSSTPPSNLCCSKIKEQKPCL 60

Query: 61 CKYMQNPTLKKFVDSPNARKVANTCGTPFPKC 91
          CKY++NP LKKFVDSPNARKVA+TCGTPFP+C
Sbjct: 61 CKYLKNPNLKKFVDSPNARKVASTCGTPFPRC 92

[Close]

BLAST of MS021658.1 vs. TAIR 10
Match: AT3G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 107.1 bits (266), Expect = 7.6e-24
Identity = 49/87 (56.32%), Postives = 69/87 (79.31%), Query Frame = 0


Query: 4  SQIALSILVMFIMVEVSVAVTCSPVQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQ 63
          S  AL+ +++ I+   + AVTCSP+QLS C +AITS+ PPS LCC+K+KEQ+PCLC YM+
Sbjct: 10 SLFALAAVLLMILAPAAEAVTCSPMQLSPCATAITSSSPPSALCCAKLKEQRPCLCGYMR 69

Query: 64 NPTLKKFVDSPNARKVANTCGTPFPKC 91
          NP+L++FV +PNARKV+ +C  P P+C
Sbjct: 70 NPSLRRFVSTPNARKVSKSCKLPIPRC 96

[Close]

BLAST of MS021658.1 vs. TAIR 10
Match: AT1G48750.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 106.7 bits (265), Expect = 1.0e-23
Identity = 49/90 (54.44%), Postives = 71/90 (78.89%), Query Frame = 0


Query: 1  MKASQIALSILVMFIMVEVSVAVTCSPVQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCK 60
          M  S +AL+  ++ + V V+  VTCSP+QL+SC +A+TS+ PPS+ CC+K++EQ+PCLC 
Sbjct: 5  MWVSVLALAAAILLLTVPVAEGVTCSPMQLASCAAAMTSSSPPSEACCTKLREQQPCLCG 64

Query: 61 YMQNPTLKKFVDSPNARKVANTCGTPFPKC 91
          YM+NPTL+++V SPNARKV+N+C  P P C
Sbjct: 65 YMRNPTLRQYVSSPNARKVSNSCKIPSPSC 94

[Close]

BLAST of MS021658.1 vs. TAIR 10
Match: AT1G73780.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 82.0 bits (201), Expect = 2.6e-16
Identity = 38/83 (45.78%), Postives = 55/83 (66.27%), Query Frame = 0


Query: 10 ILVMFIMVEVSVAVT--CSPVQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTL 69
          +L++ +  E  VA    C+P QLS C+  I     PS LCCSK+KEQ+ C+C+Y++NP  
Sbjct: 16 LLILIVAQENRVAAVDPCNPAQLSPCLETIMKGSEPSDLCCSKVKEQQHCICQYLKNPNF 75

Query: 70 KKFVDSPNARKVANTCGTPFPKC 91
          K F++SPNA+ +A  C  P+PKC
Sbjct: 76 KSFLNSPNAKIIATDCHCPYPKC 98

[Close]

BLAST of MS021658.1 vs. TAIR 10
Match: AT5G38160.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 80.5 bits (197), Expect = 7.7e-16
Identity = 36/70 (51.43%), Postives = 45/70 (64.29%), Query Frame = 0


Query: 21  VAVTCSPVQLSSCVSAITSAVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVDSPNARKVA 80
           V VTC   QLSSCV+A+++  PPS  CC K+KE + CLC Y+QNP    +V SPNARK  
Sbjct: 34  VNVTCDATQLSSCVTAVSTGAPPSTDCCGKLKEHETCLCTYIQNPLYSSYVTSPNARKTL 93

Query: 81  NTCGTPFPKC 91
             C   +P C
Sbjct: 94  AACDVAYPTC 103

[Close]

BLAST of MS021658.1 vs. TAIR 10
Match: AT5G38170.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 77.8 bits (190), Expect = 5.0e-15
Identity = 42/103 (40.78%), Postives = 61/103 (59.22%), Query Frame = 0


Query: 1   MKASQIALSILVMFIMV--------EVSVA-----VTCSPVQLSSCVSAITSAVPPSKLC 60
           MK + +   + V+ +MV        EV ++     VTC  VQLSSC + + + VPPS  C
Sbjct: 1   MKFTALVFIVFVVGVMVSPVSIRATEVKLSGGEADVTCDAVQLSSCATPMLTGVPPSTEC 60

Query: 61  CSKIKEQKPCLCKYMQNPTLKKFVDSPNARKVANTCGTPFPKC 91
           C K+KEQ+PC C Y+++P   ++V S NA+K   TCG P+P C
Sbjct: 61  CGKLKEQQPCFCTYIKDPRYSQYVGSANAKKTLATCGVPYPTC 103

The following BLAST results are available for this feature:

BLAST of MS021658.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6572947.1	1.9e-37	91.11	hypothetical protein SDJN03_26834, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022923700.1	3.3e-37	92.22	non-specific lipid-transfer protein 2-like [Cucurbita moschata] >XP_023519179.1 ...	[more]
XP_004137484.1	5.7e-37	91.11	non-specific lipid-transfer protein 2 [Cucumis sativus]	[more]
XP_023000838.1	7.4e-37	91.11	probable non-specific lipid-transfer protein AKCS9 [Cucurbita maxima]	[more]
TYJ99011.1	3.7e-36	88.89	non-specific lipid-transfer protein 2 [Cucumis melo var. makuwa]	[more]

BLAST of MS021658.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P82353	7.2e-19	57.35	Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1	[more]
Q43681	1.2e-18	48.39	Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 ...	[more]
P86809	8.8e-17	59.70	Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=27811...	[more]
P82901	1.0e-09	40.91	Non-specific lipid-transfer protein 2P OS=Triticum aestivum OX=4565 PE=1 SV=1	[more]
A2XBN5	2.3e-09	37.31	Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]

BLAST of MS021658.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ECM2	1.6e-37	92.22	non-specific lipid-transfer protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A0A0LVT5	2.7e-37	91.11	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042560 PE=4 SV...	[more]
A0A6J1KNT4	3.6e-37	91.11	probable non-specific lipid-transfer protein AKCS9 OS=Cucurbita maxima OX=3661 G...	[more]
A0A5D3BJV8	1.8e-36	88.89	Non-specific lipid-transfer protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
V7C3M6	8.5e-31	78.26	AAI domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_004G154200g...	[more]

BLAST of MS021658.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18280.1	7.6e-24	56.32	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G48750.1	1.0e-23	54.44	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G73780.1	2.6e-16	45.78	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G38160.1	7.7e-16	51.43	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G38170.1	5.0e-15	40.78	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 20..86 e-value: 1.5E-7 score: 31.5
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 23..90 e-value: 1.4E-23 score: 84.9
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 24..90
None	No IPR available	PANTHER	PTHR33214:SF30	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 2..90
IPR033872	Non-specific lipid-transfer protein type 2	PANTHER	PTHR33214	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 2..90
IPR033872	Non-specific lipid-transfer protein type 2	CDD	cd01959	nsLTP2	coord: 25..90 e-value: 2.0807E-26 score: 90.4506

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS021658	MS021658	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS021658.1-cds	MS021658.1-cds-scaffold348:135697..135966	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS021658.1	MS021658.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport