MS019504.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS019504.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	F-box protein
Location	scaffold729: 55206 .. 56231 (+)
Sequence length	1026
RNA-Seq Expression	MS019504.1
Synteny	MS019504.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCTGTCAGATCTTTCCCCCGCTGGCGTTCTCCTCCGCGGCCGTCGCCGGTGATGGCAGTGCCAGCGCCACCTCTATTACGGACATCCATCCCGACATTCTCCGAACTCATATCTTAACGCGCCTCGACGGAGCCGCCCTCGCCGCCGCCGCCTGCACTTCGTCGCATCTCCGCCGGCTCGCCGGCGAGCCAAGCCTCTGGGCGGAAATCTGCCGGTCGAGGTGGCCGTCGACCGCCACGCCGCGCCTTGGCGCTCTGATTTCAGCATTTCCCAACGGACCTCGGTCTTTCTTCTCCGATTCCGTCCCTCTCCTCTCCGATTACCCCGAACCTTCCGCTTCTTCTCCTTCGCCGCCGCGCCGCCACCCGCCGGAATTGATCTCCGCCGTCGACATTTACTACCGCGGACAGATGATTTTCAGCAAAGTCGTGGAGACAGAGACCGAGTCCGGATGGTTCCGCTGCTCGCCGTTTCGGATCGATATGCTCGATCCGAAAGACGTGGTTCCGACGCCGATTAGATATCCAATCGGCGGAGGAAACGGCTGCCGGGACCTTGCGGAGGATCTGACTCTGAGCTGGATTCTGATCGATTCGATCGGACGGCGGGCGATGAACGTTTCGAGCTTCCGGGCGGTGTGCGTGCAGCGGCACTGGCTGAGCGGTGAGGTGCACGCGCGATTCGCGACGGCGGTAGGCGGCGAGAGAGGGACGGCGGCGGAGTGCGTGGAGTGCGGGATAGTGGTGACGTGCGGCGGTTGGGAGGGAGGGGATTTGCAGGTGAGGGAGGTGAATTTGCAGGTGGAGGACCTGGAGGGGAATTTTTTGAATGGGAAGGACAGTTTGGTAATTTTGGGGAGGGCACTGGAGGGTAGAAATGGAAGGAAAAAGTTGGAGGAGTTTAAAGAGAAGAAAAGGGAGAGAAAGGAAAGGGAGGTGAGGAGAGAAGGGACTCTAGATATGATGTGTTTGGCTTTTGGTTTGTTGGGGTTTGCCACTTTGTGTGTTTTTCTTTTGTTTAGA

mRNA sequence

ATGTCCTGTCAGATCTTTCCCCCGCTGGCGTTCTCCTCCGCGGCCGTCGCCGGTGATGGCAGTGCCAGCGCCACCTCTATTACGGACATCCATCCCGACATTCTCCGAACTCATATCTTAACGCGCCTCGACGGAGCCGCCCTCGCCGCCGCCGCCTGCACTTCGTCGCATCTCCGCCGGCTCGCCGGCGAGCCAAGCCTCTGGGCGGAAATCTGCCGGTCGAGGTGGCCGTCGACCGCCACGCCGCGCCTTGGCGCTCTGATTTCAGCATTTCCCAACGGACCTCGGTCTTTCTTCTCCGATTCCGTCCCTCTCCTCTCCGATTACCCCGAACCTTCCGCTTCTTCTCCTTCGCCGCCGCGCCGCCACCCGCCGGAATTGATCTCCGCCGTCGACATTTACTACCGCGGACAGATGATTTTCAGCAAAGTCGTGGAGACAGAGACCGAGTCCGGATGGTTCCGCTGCTCGCCGTTTCGGATCGATATGCTCGATCCGAAAGACGTGGTTCCGACGCCGATTAGATATCCAATCGGCGGAGGAAACGGCTGCCGGGACCTTGCGGAGGATCTGACTCTGAGCTGGATTCTGATCGATTCGATCGGACGGCGGGCGATGAACGTTTCGAGCTTCCGGGCGGTGTGCGTGCAGCGGCACTGGCTGAGCGGTGAGGTGCACGCGCGATTCGCGACGGCGGTAGGCGGCGAGAGAGGGACGGCGGCGGAGTGCGTGGAGTGCGGGATAGTGGTGACGTGCGGCGGTTGGGAGGGAGGGGATTTGCAGGTGAGGGAGGTGAATTTGCAGGTGGAGGACCTGGAGGGGAATTTTTTGAATGGGAAGGACAGTTTGGTAATTTTGGGGAGGGCACTGGAGGGTAGAAATGGAAGGAAAAAGTTGGAGGAGTTTAAAGAGAAGAAAAGGGAGAGAAAGGAAAGGGAGGTGAGGAGAGAAGGGACTCTAGATATGATGTGTTTGGCTTTTGGTTTGTTGGGGTTTGCCACTTTGTGTGTTTTTCTTTTGTTTAGA

Coding sequence (CDS)

ATGTCCTGTCAGATCTTTCCCCCGCTGGCGTTCTCCTCCGCGGCCGTCGCCGGTGATGGCAGTGCCAGCGCCACCTCTATTACGGACATCCATCCCGACATTCTCCGAACTCATATCTTAACGCGCCTCGACGGAGCCGCCCTCGCCGCCGCCGCCTGCACTTCGTCGCATCTCCGCCGGCTCGCCGGCGAGCCAAGCCTCTGGGCGGAAATCTGCCGGTCGAGGTGGCCGTCGACCGCCACGCCGCGCCTTGGCGCTCTGATTTCAGCATTTCCCAACGGACCTCGGTCTTTCTTCTCCGATTCCGTCCCTCTCCTCTCCGATTACCCCGAACCTTCCGCTTCTTCTCCTTCGCCGCCGCGCCGCCACCCGCCGGAATTGATCTCCGCCGTCGACATTTACTACCGCGGACAGATGATTTTCAGCAAAGTCGTGGAGACAGAGACCGAGTCCGGATGGTTCCGCTGCTCGCCGTTTCGGATCGATATGCTCGATCCGAAAGACGTGGTTCCGACGCCGATTAGATATCCAATCGGCGGAGGAAACGGCTGCCGGGACCTTGCGGAGGATCTGACTCTGAGCTGGATTCTGATCGATTCGATCGGACGGCGGGCGATGAACGTTTCGAGCTTCCGGGCGGTGTGCGTGCAGCGGCACTGGCTGAGCGGTGAGGTGCACGCGCGATTCGCGACGGCGGTAGGCGGCGAGAGAGGGACGGCGGCGGAGTGCGTGGAGTGCGGGATAGTGGTGACGTGCGGCGGTTGGGAGGGAGGGGATTTGCAGGTGAGGGAGGTGAATTTGCAGGTGGAGGACCTGGAGGGGAATTTTTTGAATGGGAAGGACAGTTTGGTAATTTTGGGGAGGGCACTGGAGGGTAGAAATGGAAGGAAAAAGTTGGAGGAGTTTAAAGAGAAGAAAAGGGAGAGAAAGGAAAGGGAGGTGAGGAGAGAAGGGACTCTAGATATGATGTGTTTGGCTTTTGGTTTGTTGGGGTTTGCCACTTTGTGTGTTTTTCTTTTGTTTAGA

Protein sequence

MSCQIFPPLAFSSAAVAGDGSASATSITDIHPDILRTHILTRLDGAALAAAACTSSHLRRLAGEPSLWAEICRSRWPSTATPRLGALISAFPNGPRSFFSDSVPLLSDYPEPSASSPSPPRRHPPELISAVDIYYRGQMIFSKVVETETESGWFRCSPFRIDMLDPKDVVPTPIRYPIGGGNGCRDLAEDLTLSWILIDSIGRRAMNVSSFRAVCVQRHWLSGEVHARFATAVGGERGTAAECVECGIVVTCGGWEGGDLQVREVNLQVEDLEGNFLNGKDSLVILGRALEGRNGRKKLEEFKEKKRERKEREVRREGTLDMMCLAFGLLGFATLCVFLLFR

Homology

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BLAST of MS019504.1 vs. NCBI nr
Match: XP_004149218.1 (probable F-box protein At2g36090 [Cucumis sativus] >KGN59160.1 hypothetical protein Csa_001122 [Cucumis sativus])

HSP 1 Score: 505.0 bits (1299), Expect = 5.1e-139
Identity = 260/351 (74.07%), Postives = 290/351 (82.62%), Query Frame = 0


Query: 1   MSCQIFPPLAFSSAAVAGDGSASATSITDIHPDILRTHILTRLDGAALAAAACTSSHLRR 60
           M  Q F PLAF SA    D  A++TSI+DIHPDILRTHILTRLDG ALA+AACTSS L R
Sbjct: 1   MPNQTFSPLAFPSA----DVDAASTSISDIHPDILRTHILTRLDGPALASAACTSSELHR 60

Query: 61  LAGEPSLWAEICRSRWPSTATPRLGALISAFPNGPRSFFSDSVPLLSDYPEPSASSPSPP 120
           L  EP LW+ IC S WPST TPRL ALIS FP+GPRSFFSDS+P  S++ E S SSP+ P
Sbjct: 61  LTAEPKLWSAICHSTWPSTTTPRLHALISEFPDGPRSFFSDSLPRGSNHSETSTSSPTSP 120

Query: 121 -----RRH-PPELISAVDIYYRGQMIFSKVVETETESGWFRCSPFRIDMLDPKDVVPTPI 180
                RRH PPELISAVDIYYRG+MIFSKVVETET SGWFRCSPFRIDMLDPKDVVPTPI
Sbjct: 121 ATYCHRRHLPPELISAVDIYYRGEMIFSKVVETETVSGWFRCSPFRIDMLDPKDVVPTPI 180

Query: 181 RYPIGGGNGCRDLAEDLTLSWILIDSIGRRAMNVSSFRAVCVQRHWLSGEVHARFATAVG 240
           ++PIG GN CR+L EDLTLSWI+ID  GRRAMN+SS+RAV V++HWLSGEVH  F T +G
Sbjct: 181 KFPIGEGNACRELGEDLTLSWIVIDGAGRRAMNLSSYRAVKVEQHWLSGEVHVEFGTVLG 240

Query: 241 GERGTAAECVECGIVVTCGGWEGGDLQVREVNLQVEDLEGNFLNGKDSLVILGRALE--- 300
           GE+GTAAE V+CGI VTCGGWEGG+LQVREVNLQVED++G FL+GKDSLVIL RA+E   
Sbjct: 241 GEKGTAAEWVKCGIAVTCGGWEGGNLQVREVNLQVEDMDGTFLDGKDSLVILERAMEGKK 300

Query: 301 GRNGRKKLEEFKEKKRERKEREVRREGTLDMMCLAFGLLGFATLCVFLLFR 343
           GR GRK+L EF EKKRERKE +VRREGTLDMMCLAFG  GFATLC+  LFR
Sbjct: 301 GRKGRKRLNEFMEKKRERKEMKVRREGTLDMMCLAFGFFGFATLCLCFLFR 347

[Close]

BLAST of MS019504.1 vs. NCBI nr
Match: XP_038905521.1 (probable F-box protein At2g36090 [Benincasa hispida])

HSP 1 Score: 501.1 bits (1289), Expect = 7.4e-138
Identity = 262/350 (74.86%), Postives = 290/350 (82.86%), Query Frame = 0


Query: 6   FPPLAFSSAAVAGDGSASATSITDIHPDILRTHILTRLDGAALAAAACTSSHLRRLAGEP 65
           F P AFSSA  AGDG  + TSI+DIHPDILRTHILTRLDG  LAAAACTSS   RL  EP
Sbjct: 17  FSPSAFSSA--AGDG--ATTSISDIHPDILRTHILTRLDGPTLAAAACTSSEFHRLTSEP 76

Query: 66  SLWAEICRSRWPSTATPRLGALISAFPNGPRSFFSDSVPLLSDYPEPSASS-PSPP---- 125
           SLWA+IC S WPSTAT RL ALIS FP+GPRSFF DS P LS + E S SS PSP     
Sbjct: 77  SLWADICHSTWPSTATQRLDALISEFPDGPRSFFIDSFPRLSYHSETSTSSAPSPATYIR 136

Query: 126 ---RRH-PPELISAVDIYYRGQMIFSKVVETETESGWFRCSPFRIDMLDPKDVVPTPIRY 185
              R H PPELISAVDIYYRG+MIFSKVVETET SGWFRCSPFRIDMLDPKDV+PTPI++
Sbjct: 137 RRRRLHLPPELISAVDIYYRGEMIFSKVVETETVSGWFRCSPFRIDMLDPKDVIPTPIKF 196

Query: 186 PIGGGNGCRDLAEDLTLSWILIDSIGRRAMNVSSFRAVCVQRHWLSGEVHARFATAVGGE 245
           PIGGGN CR+L EDLTLSWI+ID+ GRRAMN+SS+RAV VQRHWLSGEV  +FAT +GGE
Sbjct: 197 PIGGGNACRELGEDLTLSWIMIDAAGRRAMNMSSYRAVSVQRHWLSGEVQVQFATVLGGE 256

Query: 246 RGTAAECVECGIVVTCGGWEGGDLQVREVNLQVEDLEGNFLNGKDSLVILGRALEGRNGR 305
           RGTAAE V+CGI VTCGGWEGG+LQVREVNL+VED++G FL+GKDSLVIL RA+EG+ GR
Sbjct: 257 RGTAAEWVKCGIAVTCGGWEGGNLQVREVNLEVEDMDGTFLDGKDSLVILERAMEGKMGR 316

Query: 306 K----KLEEFKEKKRERKEREVRREGTLDMMCLAFGLLGFATLCVFLLFR 343
           +    KLEEF EKK ERKER+VRREGTLDMMCLAFG  GFATLC++  FR
Sbjct: 317 RGKKIKLEEFLEKKNERKERKVRREGTLDMMCLAFGFFGFATLCLWFFFR 362

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BLAST of MS019504.1 vs. NCBI nr
Match: XP_008442873.1 (PREDICTED: probable F-box protein At1g60180 [Cucumis melo] >KAA0043853.1 putative F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 491.5 bits (1264), Expect = 5.9e-135
Identity = 253/341 (74.19%), Postives = 284/341 (83.28%), Query Frame = 0


Query: 7   PPLAFSSAAVAGDGSASATSITDIHPDILRTHILTRLDGAALAAAACTSSHLRRLAGEPS 66
           P   FS +AV  DG  ++TSI+DIHPDILRTHIL+RLDG  LAAAACTSS L RL  EP 
Sbjct: 14  PNHTFSPSAVV-DG--ASTSISDIHPDILRTHILSRLDGPDLAAAACTSSELHRLTAEPK 73

Query: 67  LWAEICRSRWPSTATPRLGALISAFPNGPRSFFSDSVPLLSDYPEPSASSPSPP----RR 126
           LWA IC S WPST TPRL ALIS FP+GPRSFF DS P  S++ E S SSPSP     RR
Sbjct: 74  LWAAICHSTWPSTTTPRLDALISEFPDGPRSFFYDSFPRGSNHSETSTSSPSPATYCRRR 133

Query: 127 H-PPELISAVDIYYRGQMIFSKVVETETESGWFRCSPFRIDMLDPKDVVPTPIRYPIGGG 186
           H P ELISAVDIYYRG+MIFS+VVETET SGWFRCSPFRIDMLDPKDVVPT I++PIG G
Sbjct: 134 HLPMELISAVDIYYRGEMIFSRVVETETVSGWFRCSPFRIDMLDPKDVVPTTIKFPIGDG 193

Query: 187 NGCRDLAEDLTLSWILIDSIGRRAMNVSSFRAVCVQRHWLSGEVHARFATAVGGERGTAA 246
           N CR+LAEDLTLSWI+ID  GRRA+N+SS+RAV V+RHWLSGEVH  F T +GGERGTAA
Sbjct: 194 NTCRELAEDLTLSWIVIDGAGRRAVNLSSYRAVKVERHWLSGEVHVEFGTVLGGERGTAA 253

Query: 247 ECVECGIVVTCGGWEGGDLQVREVNLQVEDLEGNFLNGKDSLVILGRALEGRNGRKKLEE 306
           E V+CGI VTCGGWEGG+LQVREVNLQVED++G FL+GK+SLVIL RA+EGR GRK+L+E
Sbjct: 254 EWVKCGIAVTCGGWEGGNLQVREVNLQVEDMDGTFLDGKESLVILERAMEGRKGRKRLDE 313

Query: 307 FKEKKRERKEREVRREGTLDMMCLAFGLLGFATLCVFLLFR 343
           F EKK+ERKE +VRREGTLDMMCLAFG  GFATLC+  LFR
Sbjct: 314 FMEKKKERKEMKVRREGTLDMMCLAFGFFGFATLCLCFLFR 351

[Close]

BLAST of MS019504.1 vs. NCBI nr
Match: XP_022983009.1 (probable F-box protein At2g36090 [Cucurbita maxima])

HSP 1 Score: 486.1 bits (1250), Expect = 2.5e-133
Identity = 255/347 (73.49%), Postives = 283/347 (81.56%), Query Frame = 0


Query: 4   QIFPPLAFSSAAVAGDGSASATSITDIHPDILRTHILTRLDGAALAAAACTSSHLRRLAG 63
           Q   PLA  SA  +GDG A+ TS+TDIHPD+LRTHILTRLDG ALAA ACTSS L  L  
Sbjct: 15  QTSSPLAL-SAFSSGDGDATTTSVTDIHPDVLRTHILTRLDGPALAAVACTSSQLHCLTT 74

Query: 64  EPSLWAEICRSRWPSTATPRLGALISAFPNGPRSFFSDSVPLLSDYPEPS-ASSPSPP-- 123
           +P+LWAE+CRS WPSTAT RL ALIS FPNGPRSFFSDS P LS   E S +SSPS    
Sbjct: 75  DPNLWAELCRSTWPSTATQRLHALISEFPNGPRSFFSDSFPRLSYNSETSTSSSPSSATY 134

Query: 124 --RRH--PPELISAVDIYYRGQMIFSKVVETETESGWFRCSPFRIDMLDPKDVVPTPIRY 183
             RRH   PELISAVDIYYRG+M+FSKVVETET SGWFRC+PFRIDMLDPKDVV TPI++
Sbjct: 135 SRRRHHFTPELISAVDIYYRGEMVFSKVVETETLSGWFRCTPFRIDMLDPKDVVQTPIKF 194

Query: 184 PIGGGNGCRDLAEDLTLSWILIDSIGRRAMNVSSFRAVCVQRHWLSGEVHARFATAVGGE 243
           PIG GN C +L EDLTLSWI+ID+ GRRA+N+SS+R V VQRHWLSGEVH RFA  + GE
Sbjct: 195 PIGDGNTCWELTEDLTLSWIMIDTAGRRAINLSSYRPVSVQRHWLSGEVHVRFAAVLDGE 254

Query: 244 RGTAAECVECGIVVTCGGWEGGDLQVREVNLQVEDLEGNFLNGKDSLVILGRALE---GR 303
           RGTA ECV+CGI VTCGGWEGG+LQVREVNLQVEDL+G +LNGKDSLVIL RALE   GR
Sbjct: 255 RGTATECVQCGIAVTCGGWEGGNLQVREVNLQVEDLDGTYLNGKDSLVILERALEGKTGR 314

Query: 304 NGRKKLEEFKEKKRERKEREVRREGTLDMMCLAFGLLGFATLCVFLL 341
            GRKKLEEF EKKRERKER +RREGTLD +CLAFG LGFAT  + L+
Sbjct: 315 RGRKKLEEFMEKKRERKERTLRREGTLDKVCLAFGFLGFATFLLCLI 360

[Close]

BLAST of MS019504.1 vs. NCBI nr
Match: XP_022935408.1 (probable F-box protein At2g36090 [Cucurbita moschata] >KAG7017474.1 putative F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 481.9 bits (1239), Expect = 4.7e-132
Identity = 254/346 (73.41%), Postives = 282/346 (81.50%), Query Frame = 0


Query: 8   PLAFSSAAVAGDGSASATSITDIHPDILRTHILTRLDGAALAAAACTSSHLRRLAGEPSL 67
           PLA SSA  +GDG A+ TS+TDIHPD+LRTHILTRLDG ALAA A TSS L  L  + +L
Sbjct: 19  PLA-SSAFSSGDGDAATTSVTDIHPDVLRTHILTRLDGPALAAVASTSSQLHCLTADTNL 78

Query: 68  WAEICRSRWPSTATPRLGALISAFPNGPRSFFSDSVPLLSDYPEPS-ASSPSPP------ 127
           WAE+CRS WPSTAT RL ALIS FPNGPRSFFSDS P LS + E S +SSPS        
Sbjct: 79  WAELCRSTWPSTATQRLHALISEFPNGPRSFFSDSFPRLSYHSETSTSSSPSSATYSRRS 138

Query: 128 -RRH--PPELISAVDIYYRGQMIFSKVVETETESGWFRCSPFRIDMLDPKDVVPTPIRYP 187
            RRH   PELISAVDIYYRG+M+FSKVVETET SGWFRC+PFRIDMLDPKDVV TPI++P
Sbjct: 139 RRRHHFTPELISAVDIYYRGEMVFSKVVETETLSGWFRCTPFRIDMLDPKDVVQTPIKFP 198

Query: 188 IGGGNGCRDLAEDLTLSWILIDSIGRRAMNVSSFRAVCVQRHWLSGEVHARFATAVGGER 247
           IG GN C +L EDLTLSWI+ID+ GRRAMN+SS+R V VQRHWLSGEVH RFA  + GER
Sbjct: 199 IGDGNTCWELTEDLTLSWIMIDTAGRRAMNLSSYRPVSVQRHWLSGEVHVRFAAVLDGER 258

Query: 248 GTAAECVECGIVVTCGGWEGGDLQVREVNLQVEDLEGNFLNGKDSLVILGRALE---GRN 307
           GTA ECV+CGI VTCGGWEGG+LQVREVNLQVEDL+G +LNGKDSLVIL RALE   GR 
Sbjct: 259 GTAMECVQCGIAVTCGGWEGGNLQVREVNLQVEDLDGTYLNGKDSLVILERALEGKTGRR 318

Query: 308 GRKKLEEFKEKKRERKEREVRREGTLDMMCLAFGLLGFATLCVFLL 341
           GRKKLEEF  KKRERKER +RREGTLDM+CLAFG LGFAT  + L+
Sbjct: 319 GRKKLEEFMAKKRERKERTLRREGTLDMVCLAFGFLGFATFLLCLI 363

[Close]

BLAST of MS019504.1 vs. ExPASy Swiss-Prot
Match: Q9SIH5 (Probable F-box protein At2g36090 OS=Arabidopsis thaliana OX=3702 GN=At2g36090 PE=2 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 2.6e-77
Identity = 169/332 (50.90%), Postives = 221/332 (66.57%), Query Frame = 0


Query: 24  ATSITD----IHPDILRTHILTRLDGAALAAAACTSSHLRRLAGEPSLWAEICRSRWPST 83
           +T++TD    +H DI+ +HILTRLDGA LA+ +C SSHL  LA    LW++ICRS WPS 
Sbjct: 10  STTVTDLISTVHDDIIESHILTRLDGATLASVSCASSHLHHLASNEILWSKICRSTWPSC 69

Query: 84  ATPRLGALISAFPNGPRSFFSDSVPLLSDYPEPSASSPSPPRRHPPELISAVDIYYRGQM 143
           +             G RSFFSD+  ++      +A + S   R  PELISAVD++YRG++
Sbjct: 70  S------------GGSRSFFSDAYSMVE-----TAGTVSDLDRPFPELISAVDLHYRGKL 129

Query: 144 IFSKVVETETESGWFRCSPFRIDMLDPKDVVPTPIRYPIGGGNGCRDLAEDLTLSWILID 203
           IFS+VV+TET + WF+ SP RID++D KD V TPI+      + CRDL +DLTLSWI+ID
Sbjct: 130 IFSRVVKTETTTAWFKSSPLRIDLVDTKDTVATPIKRRQRTEDTCRDLEKDLTLSWIVID 189

Query: 204 SIGRRAMNVSSFRAVCVQRHWLSGEVHARFATAVGGERGTAAECVECGIVVTCGGWEGGD 263
            IG+RA N+SS R V VQR+W+SGEV A+FAT VG     A ECV    VVTCG  E   
Sbjct: 190 PIGKRAANISSHRPVSVQRNWISGEVEAQFATVVG-----AVECVI--TVVTCGEEE--- 249

Query: 264 LQVREVNLQVEDLEGNFLNGKDSLVILGRALEGR--NG-------RKKLEEFKEKKRERK 323
           + VREV+L+VE +EG  LNG+DSLVIL   +EG+  NG       +K+ EEF EKKRE K
Sbjct: 250 MHVREVSLKVEKMEGTHLNGRDSLVILRSVMEGKRVNGSRREVESKKRHEEFMEKKREMK 309

Query: 324 EREVRREGTLDMMCLAFGLLGFATLCVFLLFR 343
           E+++R E   D++ +AFG+LGF  L VF L+R
Sbjct: 310 EKKMRVESVFDILTVAFGILGFVLLVVFCLWR 314

[Close]

BLAST of MS019504.1 vs. ExPASy Swiss-Prot
Match: Q9XIN8 (F-box protein At2g27310 OS=Arabidopsis thaliana OX=3702 GN=At2g27310 PE=2 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 4.2e-67
Identity = 150/336 (44.64%), Postives = 202/336 (60.12%), Query Frame = 0


Query: 26  SITDIHPDILRTHILTRLDGAALAAAACTSSHLRRLAGEPSLWAEICRSRWPSTATPRLG 85
           SI+ +H DI++T ILTRLDG  LA+ A TSS+L+ L  E  LW E+    WPS   PR+ 
Sbjct: 11  SISTLHSDIIQTQILTRLDGPTLASTATTSSYLQTLCTEEKLWQELSIDTWPSINDPRVV 70

Query: 86  ALISAFPNGPRSFFSDSVPLLSDYPEPSASSPSPPRRHPPELISAVDIYYRGQMIFSKVV 145
             IS+FP+G RSFF+DS P      +     P      P  LISAVD+YYRG++I+SKV 
Sbjct: 71  QAISSFPSGYRSFFADSYPFTEHTWQSEKHDP------PTGLISAVDLYYRGEIIYSKVQ 130

Query: 146 ETETE---SGWFRCSPFRIDMLDPKDVVPTPIRYPIGGGNG-CRDLAEDLTLSWILIDSI 205
           E ETE   SGWF  SPFR+D+LDPK+ V T IRYP G      +D+ E + L+WILID I
Sbjct: 131 EMETEKGKSGWFLSSPFRVDILDPKESVQTRIRYPGGDYEAWVKDMEESMKLNWILIDPI 190

Query: 206 GRRAMNVSSFRAVCVQRHWLSGEVHARFATAVGGERGTAAECVECGIVVTCGGWE----- 265
            +RA N+SS +AV  +R+WL+G++  RF+T V  E    A  V CG   +   W+     
Sbjct: 191 KKRAANISSRKAVSARRNWLTGDLEIRFSTVVTAEAAEVAAVVSCG---SAEAWKEVDEE 250

Query: 266 -GGDLQVREVNLQVEDLEGNFLNGKDSLVILGRALEG---------RNGRKKLEEFKEKK 325
            GG++ VR+V LQVED+EG  + G+DSLVIL   L+G         R  +++ EE+   K
Sbjct: 251 VGGEIHVRDVRLQVEDIEGKCMKGRDSLVILQGLLDGKRSCKDDEERRAKERYEEYVRMK 310

Query: 326 RERKEREVRREGTLDMMCLAFGLLGFATLCVFLLFR 343
            + +E + RRE   D +C+ FG   F  L  F+L R
Sbjct: 311 IQWRENKERREKAQDTICMIFGFSMFVLLWSFILLR 337

[Close]

BLAST of MS019504.1 vs. ExPASy Swiss-Prot
Match: Q2V3R1 (F-box protein At3g44326 OS=Arabidopsis thaliana OX=3702 GN=At3g44326 PE=2 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 6.3e-55
Identity = 140/352 (39.77%), Postives = 200/352 (56.82%), Query Frame = 0


Query: 12  SSAAVAGDGSASATSITDIHPDILRTHILTRLDGAALAAAACTSSHLRRLAGEPSLWAEI 71
           SS+ V       +  I  +  D+LR++ILTRLDG++LAA +CT S+L     + SLW + 
Sbjct: 6   SSSTVEQPSRGGSPGINAVSSDVLRSNILTRLDGSSLAALSCTCSNLNSFCSDESLWRQQ 65

Query: 72  CRSRWPSTATPRLGALISAFPNGPRSFFSDSVPLLSDYPEPSASSPSPPRRHPPELISAV 131
           C + WPST+  R+ ++IS FP+G R+FFSDS P L    E       PP     ELISAV
Sbjct: 66  CSATWPSTSDTRVQSIISTFPDGHRTFFSDSFPFL----EHDVGINLPPSVDTSELISAV 125

Query: 132 DIYYRGQMIFSKVVETETESGWFRCSPFRIDMLDPKDVVPTPIRYPIGGGNGCR------ 191
           DI+Y+  +IFS+V  TET SGWF CSP R+D+++PK+++PT +       + C+      
Sbjct: 126 DIFYKDDVIFSRVHVTETVSGWFLCSPMRVDLVEPKELIPTRVLVT----DQCKDDTWKS 185

Query: 192 DLAEDLTLSWILIDSIGRRAMNVSSFRAVCVQRHWLSGEVHARFATAVGGERGTAAECVE 251
           DL E+L+LSWILID   +RA +VS+ + V V RHWL+GEVH +F++         +E VE
Sbjct: 186 DLEENLSLSWILIDPTCKRAADVSTRKPVSVHRHWLTGEVHVKFSSIFVVGNKKRSEQVE 245

Query: 252 CGIVVTCGGW-----EGGDLQVREVNLQVEDLEGNFLNGKDSLVILGRALEGR------- 311
             + V    +     E   +Q+REV+L  ED +G  L GK SL IL  A+  +       
Sbjct: 246 FTVTVVLAVFNRREEETAVMQIREVSLVAEDKDGRNLGGKVSLEILVAAMGMKRRFRAGG 305

Query: 312 --NGRKKLEEFKEKKRERKEREVRREGTLDM----MCLAFGLLGFATLCVFL 340
              G++K  E+ E+K  + E + RR     M      +A  LLGF  LC +L
Sbjct: 306 EEEGKEKYIEYMERKTAKAEMKWRRGKETAMETAACWIAVLLLGF-LLCFYL 348

[Close]

BLAST of MS019504.1 vs. ExPASy TrEMBL
Match: A0A0A0LAY8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G777680 PE=4 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 2.5e-139
Identity = 260/351 (74.07%), Postives = 290/351 (82.62%), Query Frame = 0


Query: 1   MSCQIFPPLAFSSAAVAGDGSASATSITDIHPDILRTHILTRLDGAALAAAACTSSHLRR 60
           M  Q F PLAF SA    D  A++TSI+DIHPDILRTHILTRLDG ALA+AACTSS L R
Sbjct: 1   MPNQTFSPLAFPSA----DVDAASTSISDIHPDILRTHILTRLDGPALASAACTSSELHR 60

Query: 61  LAGEPSLWAEICRSRWPSTATPRLGALISAFPNGPRSFFSDSVPLLSDYPEPSASSPSPP 120
           L  EP LW+ IC S WPST TPRL ALIS FP+GPRSFFSDS+P  S++ E S SSP+ P
Sbjct: 61  LTAEPKLWSAICHSTWPSTTTPRLHALISEFPDGPRSFFSDSLPRGSNHSETSTSSPTSP 120

Query: 121 -----RRH-PPELISAVDIYYRGQMIFSKVVETETESGWFRCSPFRIDMLDPKDVVPTPI 180
                RRH PPELISAVDIYYRG+MIFSKVVETET SGWFRCSPFRIDMLDPKDVVPTPI
Sbjct: 121 ATYCHRRHLPPELISAVDIYYRGEMIFSKVVETETVSGWFRCSPFRIDMLDPKDVVPTPI 180

Query: 181 RYPIGGGNGCRDLAEDLTLSWILIDSIGRRAMNVSSFRAVCVQRHWLSGEVHARFATAVG 240
           ++PIG GN CR+L EDLTLSWI+ID  GRRAMN+SS+RAV V++HWLSGEVH  F T +G
Sbjct: 181 KFPIGEGNACRELGEDLTLSWIVIDGAGRRAMNLSSYRAVKVEQHWLSGEVHVEFGTVLG 240

Query: 241 GERGTAAECVECGIVVTCGGWEGGDLQVREVNLQVEDLEGNFLNGKDSLVILGRALE--- 300
           GE+GTAAE V+CGI VTCGGWEGG+LQVREVNLQVED++G FL+GKDSLVIL RA+E   
Sbjct: 241 GEKGTAAEWVKCGIAVTCGGWEGGNLQVREVNLQVEDMDGTFLDGKDSLVILERAMEGKK 300

Query: 301 GRNGRKKLEEFKEKKRERKEREVRREGTLDMMCLAFGLLGFATLCVFLLFR 343
           GR GRK+L EF EKKRERKE +VRREGTLDMMCLAFG  GFATLC+  LFR
Sbjct: 301 GRKGRKRLNEFMEKKRERKEMKVRREGTLDMMCLAFGFFGFATLCLCFLFR 347

[Close]

BLAST of MS019504.1 vs. ExPASy TrEMBL
Match: A0A5A7TK58 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G001880 PE=4 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.8e-135
Identity = 253/341 (74.19%), Postives = 284/341 (83.28%), Query Frame = 0


Query: 7   PPLAFSSAAVAGDGSASATSITDIHPDILRTHILTRLDGAALAAAACTSSHLRRLAGEPS 66
           P   FS +AV  DG  ++TSI+DIHPDILRTHIL+RLDG  LAAAACTSS L RL  EP 
Sbjct: 14  PNHTFSPSAVV-DG--ASTSISDIHPDILRTHILSRLDGPDLAAAACTSSELHRLTAEPK 73

Query: 67  LWAEICRSRWPSTATPRLGALISAFPNGPRSFFSDSVPLLSDYPEPSASSPSPP----RR 126
           LWA IC S WPST TPRL ALIS FP+GPRSFF DS P  S++ E S SSPSP     RR
Sbjct: 74  LWAAICHSTWPSTTTPRLDALISEFPDGPRSFFYDSFPRGSNHSETSTSSPSPATYCRRR 133

Query: 127 H-PPELISAVDIYYRGQMIFSKVVETETESGWFRCSPFRIDMLDPKDVVPTPIRYPIGGG 186
           H P ELISAVDIYYRG+MIFS+VVETET SGWFRCSPFRIDMLDPKDVVPT I++PIG G
Sbjct: 134 HLPMELISAVDIYYRGEMIFSRVVETETVSGWFRCSPFRIDMLDPKDVVPTTIKFPIGDG 193

Query: 187 NGCRDLAEDLTLSWILIDSIGRRAMNVSSFRAVCVQRHWLSGEVHARFATAVGGERGTAA 246
           N CR+LAEDLTLSWI+ID  GRRA+N+SS+RAV V+RHWLSGEVH  F T +GGERGTAA
Sbjct: 194 NTCRELAEDLTLSWIVIDGAGRRAVNLSSYRAVKVERHWLSGEVHVEFGTVLGGERGTAA 253

Query: 247 ECVECGIVVTCGGWEGGDLQVREVNLQVEDLEGNFLNGKDSLVILGRALEGRNGRKKLEE 306
           E V+CGI VTCGGWEGG+LQVREVNLQVED++G FL+GK+SLVIL RA+EGR GRK+L+E
Sbjct: 254 EWVKCGIAVTCGGWEGGNLQVREVNLQVEDMDGTFLDGKESLVILERAMEGRKGRKRLDE 313

Query: 307 FKEKKRERKEREVRREGTLDMMCLAFGLLGFATLCVFLLFR 343
           F EKK+ERKE +VRREGTLDMMCLAFG  GFATLC+  LFR
Sbjct: 314 FMEKKKERKEMKVRREGTLDMMCLAFGFFGFATLCLCFLFR 351

[Close]

BLAST of MS019504.1 vs. ExPASy TrEMBL
Match: A0A1S3B692 (probable F-box protein At1g60180 OS=Cucumis melo OX=3656 GN=LOC103486639 PE=4 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.8e-135
Identity = 253/341 (74.19%), Postives = 284/341 (83.28%), Query Frame = 0


Query: 7   PPLAFSSAAVAGDGSASATSITDIHPDILRTHILTRLDGAALAAAACTSSHLRRLAGEPS 66
           P   FS +AV  DG  ++TSI+DIHPDILRTHIL+RLDG  LAAAACTSS L RL  EP 
Sbjct: 14  PNHTFSPSAVV-DG--ASTSISDIHPDILRTHILSRLDGPDLAAAACTSSELHRLTAEPK 73

Query: 67  LWAEICRSRWPSTATPRLGALISAFPNGPRSFFSDSVPLLSDYPEPSASSPSPP----RR 126
           LWA IC S WPST TPRL ALIS FP+GPRSFF DS P  S++ E S SSPSP     RR
Sbjct: 74  LWAAICHSTWPSTTTPRLDALISEFPDGPRSFFYDSFPRGSNHSETSTSSPSPATYCRRR 133

Query: 127 H-PPELISAVDIYYRGQMIFSKVVETETESGWFRCSPFRIDMLDPKDVVPTPIRYPIGGG 186
           H P ELISAVDIYYRG+MIFS+VVETET SGWFRCSPFRIDMLDPKDVVPT I++PIG G
Sbjct: 134 HLPMELISAVDIYYRGEMIFSRVVETETVSGWFRCSPFRIDMLDPKDVVPTTIKFPIGDG 193

Query: 187 NGCRDLAEDLTLSWILIDSIGRRAMNVSSFRAVCVQRHWLSGEVHARFATAVGGERGTAA 246
           N CR+LAEDLTLSWI+ID  GRRA+N+SS+RAV V+RHWLSGEVH  F T +GGERGTAA
Sbjct: 194 NTCRELAEDLTLSWIVIDGAGRRAVNLSSYRAVKVERHWLSGEVHVEFGTVLGGERGTAA 253

Query: 247 ECVECGIVVTCGGWEGGDLQVREVNLQVEDLEGNFLNGKDSLVILGRALEGRNGRKKLEE 306
           E V+CGI VTCGGWEGG+LQVREVNLQVED++G FL+GK+SLVIL RA+EGR GRK+L+E
Sbjct: 254 EWVKCGIAVTCGGWEGGNLQVREVNLQVEDMDGTFLDGKESLVILERAMEGRKGRKRLDE 313

Query: 307 FKEKKRERKEREVRREGTLDMMCLAFGLLGFATLCVFLLFR 343
           F EKK+ERKE +VRREGTLDMMCLAFG  GFATLC+  LFR
Sbjct: 314 FMEKKKERKEMKVRREGTLDMMCLAFGFFGFATLCLCFLFR 351

[Close]

BLAST of MS019504.1 vs. ExPASy TrEMBL
Match: A0A6J1J640 (probable F-box protein At2g36090 OS=Cucurbita maxima OX=3661 GN=LOC111481680 PE=4 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 1.2e-133
Identity = 255/347 (73.49%), Postives = 283/347 (81.56%), Query Frame = 0


Query: 4   QIFPPLAFSSAAVAGDGSASATSITDIHPDILRTHILTRLDGAALAAAACTSSHLRRLAG 63
           Q   PLA  SA  +GDG A+ TS+TDIHPD+LRTHILTRLDG ALAA ACTSS L  L  
Sbjct: 15  QTSSPLAL-SAFSSGDGDATTTSVTDIHPDVLRTHILTRLDGPALAAVACTSSQLHCLTT 74

Query: 64  EPSLWAEICRSRWPSTATPRLGALISAFPNGPRSFFSDSVPLLSDYPEPS-ASSPSPP-- 123
           +P+LWAE+CRS WPSTAT RL ALIS FPNGPRSFFSDS P LS   E S +SSPS    
Sbjct: 75  DPNLWAELCRSTWPSTATQRLHALISEFPNGPRSFFSDSFPRLSYNSETSTSSSPSSATY 134

Query: 124 --RRH--PPELISAVDIYYRGQMIFSKVVETETESGWFRCSPFRIDMLDPKDVVPTPIRY 183
             RRH   PELISAVDIYYRG+M+FSKVVETET SGWFRC+PFRIDMLDPKDVV TPI++
Sbjct: 135 SRRRHHFTPELISAVDIYYRGEMVFSKVVETETLSGWFRCTPFRIDMLDPKDVVQTPIKF 194

Query: 184 PIGGGNGCRDLAEDLTLSWILIDSIGRRAMNVSSFRAVCVQRHWLSGEVHARFATAVGGE 243
           PIG GN C +L EDLTLSWI+ID+ GRRA+N+SS+R V VQRHWLSGEVH RFA  + GE
Sbjct: 195 PIGDGNTCWELTEDLTLSWIMIDTAGRRAINLSSYRPVSVQRHWLSGEVHVRFAAVLDGE 254

Query: 244 RGTAAECVECGIVVTCGGWEGGDLQVREVNLQVEDLEGNFLNGKDSLVILGRALE---GR 303
           RGTA ECV+CGI VTCGGWEGG+LQVREVNLQVEDL+G +LNGKDSLVIL RALE   GR
Sbjct: 255 RGTATECVQCGIAVTCGGWEGGNLQVREVNLQVEDLDGTYLNGKDSLVILERALEGKTGR 314

Query: 304 NGRKKLEEFKEKKRERKEREVRREGTLDMMCLAFGLLGFATLCVFLL 341
            GRKKLEEF EKKRERKER +RREGTLD +CLAFG LGFAT  + L+
Sbjct: 315 RGRKKLEEFMEKKRERKERTLRREGTLDKVCLAFGFLGFATFLLCLI 360

[Close]

BLAST of MS019504.1 vs. ExPASy TrEMBL
Match: A0A6J1FAG7 (probable F-box protein At2g36090 OS=Cucurbita moschata OX=3662 GN=LOC111442296 PE=4 SV=1)

HSP 1 Score: 481.9 bits (1239), Expect = 2.3e-132
Identity = 254/346 (73.41%), Postives = 282/346 (81.50%), Query Frame = 0


Query: 8   PLAFSSAAVAGDGSASATSITDIHPDILRTHILTRLDGAALAAAACTSSHLRRLAGEPSL 67
           PLA SSA  +GDG A+ TS+TDIHPD+LRTHILTRLDG ALAA A TSS L  L  + +L
Sbjct: 19  PLA-SSAFSSGDGDAATTSVTDIHPDVLRTHILTRLDGPALAAVASTSSQLHCLTADTNL 78

Query: 68  WAEICRSRWPSTATPRLGALISAFPNGPRSFFSDSVPLLSDYPEPS-ASSPSPP------ 127
           WAE+CRS WPSTAT RL ALIS FPNGPRSFFSDS P LS + E S +SSPS        
Sbjct: 79  WAELCRSTWPSTATQRLHALISEFPNGPRSFFSDSFPRLSYHSETSTSSSPSSATYSRRS 138

Query: 128 -RRH--PPELISAVDIYYRGQMIFSKVVETETESGWFRCSPFRIDMLDPKDVVPTPIRYP 187
            RRH   PELISAVDIYYRG+M+FSKVVETET SGWFRC+PFRIDMLDPKDVV TPI++P
Sbjct: 139 RRRHHFTPELISAVDIYYRGEMVFSKVVETETLSGWFRCTPFRIDMLDPKDVVQTPIKFP 198

Query: 188 IGGGNGCRDLAEDLTLSWILIDSIGRRAMNVSSFRAVCVQRHWLSGEVHARFATAVGGER 247
           IG GN C +L EDLTLSWI+ID+ GRRAMN+SS+R V VQRHWLSGEVH RFA  + GER
Sbjct: 199 IGDGNTCWELTEDLTLSWIMIDTAGRRAMNLSSYRPVSVQRHWLSGEVHVRFAAVLDGER 258

Query: 248 GTAAECVECGIVVTCGGWEGGDLQVREVNLQVEDLEGNFLNGKDSLVILGRALE---GRN 307
           GTA ECV+CGI VTCGGWEGG+LQVREVNLQVEDL+G +LNGKDSLVIL RALE   GR 
Sbjct: 259 GTAMECVQCGIAVTCGGWEGGNLQVREVNLQVEDLDGTYLNGKDSLVILERALEGKTGRR 318

Query: 308 GRKKLEEFKEKKRERKEREVRREGTLDMMCLAFGLLGFATLCVFLL 341
           GRKKLEEF  KKRERKER +RREGTLDM+CLAFG LGFAT  + L+
Sbjct: 319 GRKKLEEFMAKKRERKERTLRREGTLDMVCLAFGFLGFATFLLCLI 363

[Close]

BLAST of MS019504.1 vs. TAIR 10
Match: AT2G36090.1 (F-box family protein )

HSP 1 Score: 290.4 bits (742), Expect = 1.9e-78
Identity = 169/332 (50.90%), Postives = 221/332 (66.57%), Query Frame = 0


Query: 24  ATSITD----IHPDILRTHILTRLDGAALAAAACTSSHLRRLAGEPSLWAEICRSRWPST 83
           +T++TD    +H DI+ +HILTRLDGA LA+ +C SSHL  LA    LW++ICRS WPS 
Sbjct: 10  STTVTDLISTVHDDIIESHILTRLDGATLASVSCASSHLHHLASNEILWSKICRSTWPSC 69

Query: 84  ATPRLGALISAFPNGPRSFFSDSVPLLSDYPEPSASSPSPPRRHPPELISAVDIYYRGQM 143
           +             G RSFFSD+  ++      +A + S   R  PELISAVD++YRG++
Sbjct: 70  S------------GGSRSFFSDAYSMVE-----TAGTVSDLDRPFPELISAVDLHYRGKL 129

Query: 144 IFSKVVETETESGWFRCSPFRIDMLDPKDVVPTPIRYPIGGGNGCRDLAEDLTLSWILID 203
           IFS+VV+TET + WF+ SP RID++D KD V TPI+      + CRDL +DLTLSWI+ID
Sbjct: 130 IFSRVVKTETTTAWFKSSPLRIDLVDTKDTVATPIKRRQRTEDTCRDLEKDLTLSWIVID 189

Query: 204 SIGRRAMNVSSFRAVCVQRHWLSGEVHARFATAVGGERGTAAECVECGIVVTCGGWEGGD 263
            IG+RA N+SS R V VQR+W+SGEV A+FAT VG     A ECV    VVTCG  E   
Sbjct: 190 PIGKRAANISSHRPVSVQRNWISGEVEAQFATVVG-----AVECVI--TVVTCGEEE--- 249

Query: 264 LQVREVNLQVEDLEGNFLNGKDSLVILGRALEGR--NG-------RKKLEEFKEKKRERK 323
           + VREV+L+VE +EG  LNG+DSLVIL   +EG+  NG       +K+ EEF EKKRE K
Sbjct: 250 MHVREVSLKVEKMEGTHLNGRDSLVILRSVMEGKRVNGSRREVESKKRHEEFMEKKREMK 309

Query: 324 EREVRREGTLDMMCLAFGLLGFATLCVFLLFR 343
           E+++R E   D++ +AFG+LGF  L VF L+R
Sbjct: 310 EKKMRVESVFDILTVAFGILGFVLLVVFCLWR 314

[Close]

BLAST of MS019504.1 vs. TAIR 10
Match: AT2G27310.1 (F-box family protein )

HSP 1 Score: 256.5 bits (654), Expect = 3.0e-68
Identity = 150/336 (44.64%), Postives = 202/336 (60.12%), Query Frame = 0


Query: 26  SITDIHPDILRTHILTRLDGAALAAAACTSSHLRRLAGEPSLWAEICRSRWPSTATPRLG 85
           SI+ +H DI++T ILTRLDG  LA+ A TSS+L+ L  E  LW E+    WPS   PR+ 
Sbjct: 11  SISTLHSDIIQTQILTRLDGPTLASTATTSSYLQTLCTEEKLWQELSIDTWPSINDPRVV 70

Query: 86  ALISAFPNGPRSFFSDSVPLLSDYPEPSASSPSPPRRHPPELISAVDIYYRGQMIFSKVV 145
             IS+FP+G RSFF+DS P      +     P      P  LISAVD+YYRG++I+SKV 
Sbjct: 71  QAISSFPSGYRSFFADSYPFTEHTWQSEKHDP------PTGLISAVDLYYRGEIIYSKVQ 130

Query: 146 ETETE---SGWFRCSPFRIDMLDPKDVVPTPIRYPIGGGNG-CRDLAEDLTLSWILIDSI 205
           E ETE   SGWF  SPFR+D+LDPK+ V T IRYP G      +D+ E + L+WILID I
Sbjct: 131 EMETEKGKSGWFLSSPFRVDILDPKESVQTRIRYPGGDYEAWVKDMEESMKLNWILIDPI 190

Query: 206 GRRAMNVSSFRAVCVQRHWLSGEVHARFATAVGGERGTAAECVECGIVVTCGGWE----- 265
            +RA N+SS +AV  +R+WL+G++  RF+T V  E    A  V CG   +   W+     
Sbjct: 191 KKRAANISSRKAVSARRNWLTGDLEIRFSTVVTAEAAEVAAVVSCG---SAEAWKEVDEE 250

Query: 266 -GGDLQVREVNLQVEDLEGNFLNGKDSLVILGRALEG---------RNGRKKLEEFKEKK 325
            GG++ VR+V LQVED+EG  + G+DSLVIL   L+G         R  +++ EE+   K
Sbjct: 251 VGGEIHVRDVRLQVEDIEGKCMKGRDSLVILQGLLDGKRSCKDDEERRAKERYEEYVRMK 310

Query: 326 RERKEREVRREGTLDMMCLAFGLLGFATLCVFLLFR 343
            + +E + RRE   D +C+ FG   F  L  F+L R
Sbjct: 311 IQWRENKERREKAQDTICMIFGFSMFVLLWSFILLR 337

[Close]

BLAST of MS019504.1 vs. TAIR 10
Match: AT3G44326.1 (F-box family protein )

HSP 1 Score: 216.1 bits (549), Expect = 4.4e-56
Identity = 140/352 (39.77%), Postives = 200/352 (56.82%), Query Frame = 0


Query: 12  SSAAVAGDGSASATSITDIHPDILRTHILTRLDGAALAAAACTSSHLRRLAGEPSLWAEI 71
           SS+ V       +  I  +  D+LR++ILTRLDG++LAA +CT S+L     + SLW + 
Sbjct: 6   SSSTVEQPSRGGSPGINAVSSDVLRSNILTRLDGSSLAALSCTCSNLNSFCSDESLWRQQ 65

Query: 72  CRSRWPSTATPRLGALISAFPNGPRSFFSDSVPLLSDYPEPSASSPSPPRRHPPELISAV 131
           C + WPST+  R+ ++IS FP+G R+FFSDS P L    E       PP     ELISAV
Sbjct: 66  CSATWPSTSDTRVQSIISTFPDGHRTFFSDSFPFL----EHDVGINLPPSVDTSELISAV 125

Query: 132 DIYYRGQMIFSKVVETETESGWFRCSPFRIDMLDPKDVVPTPIRYPIGGGNGCR------ 191
           DI+Y+  +IFS+V  TET SGWF CSP R+D+++PK+++PT +       + C+      
Sbjct: 126 DIFYKDDVIFSRVHVTETVSGWFLCSPMRVDLVEPKELIPTRVLVT----DQCKDDTWKS 185

Query: 192 DLAEDLTLSWILIDSIGRRAMNVSSFRAVCVQRHWLSGEVHARFATAVGGERGTAAECVE 251
           DL E+L+LSWILID   +RA +VS+ + V V RHWL+GEVH +F++         +E VE
Sbjct: 186 DLEENLSLSWILIDPTCKRAADVSTRKPVSVHRHWLTGEVHVKFSSIFVVGNKKRSEQVE 245

Query: 252 CGIVVTCGGW-----EGGDLQVREVNLQVEDLEGNFLNGKDSLVILGRALEGR------- 311
             + V    +     E   +Q+REV+L  ED +G  L GK SL IL  A+  +       
Sbjct: 246 FTVTVVLAVFNRREEETAVMQIREVSLVAEDKDGRNLGGKVSLEILVAAMGMKRRFRAGG 305

Query: 312 --NGRKKLEEFKEKKRERKEREVRREGTLDM----MCLAFGLLGFATLCVFL 340
              G++K  E+ E+K  + E + RR     M      +A  LLGF  LC +L
Sbjct: 306 EEEGKEKYIEYMERKTAKAEMKWRRGKETAMETAACWIAVLLLGF-LLCFYL 348

The following BLAST results are available for this feature:

BLAST of MS019504.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149218.1	5.1e-139	74.07	probable F-box protein At2g36090 [Cucumis sativus] >KGN59160.1 hypothetical prot...	[more]
XP_038905521.1	7.4e-138	74.86	probable F-box protein At2g36090 [Benincasa hispida]	[more]
XP_008442873.1	5.9e-135	74.19	PREDICTED: probable F-box protein At1g60180 [Cucumis melo] >KAA0043853.1 putativ...	[more]
XP_022983009.1	2.5e-133	73.49	probable F-box protein At2g36090 [Cucurbita maxima]	[more]
XP_022935408.1	4.7e-132	73.41	probable F-box protein At2g36090 [Cucurbita moschata] >KAG7017474.1 putative F-b...	[more]

BLAST of MS019504.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SIH5	2.6e-77	50.90	Probable F-box protein At2g36090 OS=Arabidopsis thaliana OX=3702 GN=At2g36090 PE...	[more]
Q9XIN8	4.2e-67	44.64	F-box protein At2g27310 OS=Arabidopsis thaliana OX=3702 GN=At2g27310 PE=2 SV=1	[more]
Q2V3R1	6.3e-55	39.77	F-box protein At3g44326 OS=Arabidopsis thaliana OX=3702 GN=At3g44326 PE=2 SV=1	[more]

BLAST of MS019504.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAY8	2.5e-139	74.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G777680 PE=4 SV=1	[more]
A0A5A7TK58	2.8e-135	74.19	Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2...	[more]
A0A1S3B692	2.8e-135	74.19	probable F-box protein At1g60180 OS=Cucumis melo OX=3656 GN=LOC103486639 PE=4 SV...	[more]
A0A6J1J640	1.2e-133	73.49	probable F-box protein At2g36090 OS=Cucurbita maxima OX=3661 GN=LOC111481680 PE=...	[more]
A0A6J1FAG7	2.3e-132	73.41	probable F-box protein At2g36090 OS=Cucurbita moschata OX=3662 GN=LOC111442296 P...	[more]

BLAST of MS019504.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36090.1	1.9e-78	50.90	F-box family protein	[more]
AT2G27310.1	3.0e-68	44.64	F-box family protein	[more]
AT3G44326.1	4.4e-56	39.77	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1280.50		coord: 21..100 e-value: 8.6E-7 score: 30.8
None	No IPR available	PANTHER	PTHR33736:SF13	OS12G0156500 PROTEIN	coord: 16..336
None	No IPR available	PANTHER	PTHR33736	F-BOX PROTEIN-RELATED	coord: 16..336
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 30..98

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS019504	MS019504	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS019504.1-cds	MS019504.1-cds-scaffold729:55206..56231	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS019504.1	MS019504.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding