MS017074.1 (mRNA) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTGCCTTTTCTTCCATTTTCGTTTCTCTCTTTGCCCTCTTCTCTCTTCTAGGGTTTGCGTCTTCAACATCTCCTTCCCGATCTTCATTTTGCCCTAAAGAATCAGATGTCTTCCTCTGTGGTGTTCGATCTCAATGCCCCTCCTCTTTGATTCCCAGCTCGCCTTTACAGGTACGATTTTTCTATCGTCTTCTTGGTTTTGTGTCGATTTTTATGGATTAGCTGCTGTTATTTATTTTCTCTGTGGTGTTTTTGTTTTTTTCTTGTTATCTTGTCTGAATTCATGCTTTTGGAAAGGATATTGATGTAAACTTTGCTGGTTCCTCCCCTGTTCTGCAATTTTTGTCTCCTGAGAAATCTTTGGGGATTTCGTGTTTGTTTTTTACATTGACGTCTGGTTTCTGGGTTAGGATTTATGCCTTTGTTAGAAGAAATGTTCGTTGTTGGATTTTGATTGTGTTGGATTTTTTGATTACTCTGTATTATGATGAACATCAAACTACTGATTCTGAGGAGAGGTGAAGAAGTTTTATGCAAAAAAAAAAGAATTCCCTTTTTTTGATTTTGAAAGTTTCAACAGTCAACTGAAAGATCAGAATGGAGAAATTGATCTTAGATTAGAAGTTAGGATCAGTAGAATGTTTGTGGGGTTAAGTTGGGATGGATTCAGAATTTTTTTAAAAATTTGGGGTTGATGGTAAAGCCAATCCGATCTACTCCCACGTAAAGTCGGGTTGAGTTGGGTTAGGTTGATCACTAGTTTTGAGTCTCGAATGACTCGAGATTGCATTGAGCATTTTAAATAATTCATTTAGGGTTAGGTTGGGTTGACCCCTAGATTTTTTTTTTAATTTTTTTTTTAACAATACAAAATCTTAAAGAGATAATACTTTAAATGTTGTTCCGACTCATTTTGATATTTATAAATTCAAAAAATATTCTTAAACTAGTGTTTGATAGCTCCATCAACAATGCAACCAACAAAAATTTGTTTAAAGCTGAATTCTATCAATAATAAAAACATATCTCTTGATGCTCCATGAGTTTTTTCTTTTCTTTCCTTCTCGGAATAATAACAAAACATTTCATTTAGTAGAATCAAAGAATTAAATCCAAAAAGTGGATAAAAGCACCTCCTTTAGAAATTTGAGATTACAAAAAAAGAAAAAGAAAAAGAAAAAAGGTACTCCAATGTGTATAAAGCTATGAAGTAGACTAATTAAAAAAGAATGTTTGTGTTATAAACAACCATTTCAAAACATTGAGCTGTAAAGTAGGTTTTTGGGGCTTTTGTTTACTTTAAAGGGAAGCCTTCCTATGCTGTTCATTGATGTAACTTTTAAGGGTTTCAGGCTTATTTCTAGTATTAGGGGTTTGGTTTAAATACTATTTTGGTCCTATTATTCTTTGACTTTAATTCATTTTGGTCCTTGTGCTTTCAATTTTTGTTCACTTTAATCCATGTACTTTCGAAATATCTATTTTGGGGTCCTTGTACTTTTAAAGAGTGGCCATTTTGTTTCTTTCATTTCCATTGTTATCTCATTTTTTTCTATCATAATTCAAGCAGGGCACTTTATGCACAAATTTTTTTGAGATTTAGCATAAATTTGCATTAAAAGGTTTTTGTTGCATATAAAATTTGCATTGTTGCAAATAGATACCAAGTTGGTTACTTTTTAAAAGTACGGCGACATGCTTTGAAAGTACATTGACCAAAATGAACGTTTTGAAAGTTTAGGGACCAAAACGAACCAAAGTCAAATGTTTTTATCACTTTAATGAAAAATTCAGATTACTTTAATGAAAAGTTCAGTTTCGACATCTTTGACAACTATACTGTTTCTTTTCTTTCATAATTCATTCACAAAAGCCCTAAATGATACTTTTCTCCCAAAGAATTATTGCTCTTCTTTTGAGATTTTGACCAAGCAAGAAGTCCTTTTGGAACCCAGCTTTTATCATAGAAAGAAAAAATAAAGGCCCACAAGTATCATTAAGATTTTTTTGTTGCATGTATTTGTACAATTATACATGTATGTATGTATGTATGTGTTTGTGTGTATATATATATATATTTTATAAGAATAATAAGAAACCAAACTTTCATTGGGATATGAAAGAAATTAAAGAACATGTACAAAAACCAAGCTTGACAAAAGGGGATCCACCTATAAGAATGGACCCCAATCTAAAATAATAATACCTAACTGGTAATTACAAAATGCCTTAGAAACCAACCCCTAGAGCTAGATATTTAATCTAACCAGCTCTCAAAATTTCCTCCAAGACCTCTCAACTTCCTTAAAAATTCTACTATTCCTCTCGATCCAAATACCCCACATAATAGCACCAAAGAAACAAGCATGTATAGTATTCATCAATTTAGATAACATAACAAAATAAATATTCAATCTCATCACAAGTCTCCAATTCTTTAGTTTGAAAATGAAGATCTACTAGATTAGGTTGCAAATGAATCCCAATTCAATATGTGCACTAATCAAAGCCTCTCCCATTTTAAGAGCTGAAAAACTTTTGAAAGAGTAAAGATTCTGATAGGAATGACCTTAGGGGTAATTAGGGATATTATTAGGGTGTTGAGGGTACCTTAGTAATTAGATAGGGAAGTTGATAGGGGGAGTTGTTATAAATAGAGTGAGGTGTAGGAATGAAGGTATCCAATTGTTTAGTGGTTTAGGCTTGAGTGGTATCTCAAGAAGGGAGGGCCCAAGTACCTCTAATACTTGATTATATTGTAGTTCGTATATCTTTTTATTTTTCAATATATTTCGGGTTCTATCAGATTCTTACCTCTCGTGTGAAAAATAGATTTAAAAGTTAGAGTAGGAGTAGATGTTGGAACTCCAAAAATATCTTTGTGCAATTTATGACCAAACATGGTAATTAAAGATGTTAAGTTTCCATTGGTACAAGATACCAACTCATTACTTATATACTTGGTTCAAATGAATATGATACCAGATATTCTTTACACCTACTCAATTTTCTCCTCCCATCATTTTATATAGGTTAAAACATACATCTTCATTGAAGTAACAATTTAGTCTTTGGAGTTGAACTTTAATATTCTATAATTTAGGCCCTTAATTTAAATATATAACAATTTATGTCTTGTAGTTTAAAATTTGCAAGGATTTAGGCCTTGAACTTTAATAGGTTACTATTTCATCTCTATAGTTTGAAATTTGTAATAATTTTGTCCCCATAGTGAAAATTCTCGTTTAAGTTGTAATGGGCATTTCTTCTGTATATAGATCAATAAATCATTCAGGACAAATGTGTTTTAAACTAGAGGGAGTAAATTGTTATTGATACATCAAATTGATTGAATTCTTTGCACATTGCACCTTATAGTTTTTACACTTATCAAAGCTTTGGAAATACAACAAAAAAAAAAAAAAATCATTCCCCTTATAGTTTTTATACTTATCAAAGTTTTGGAAATGCAACACAAAAAAATCATATGAACTCATCCGTCTCGATGAATTCAAAGAGCAACTTTTCGAGAGTAATCATCCTAGAAAAACAATTTGAACCCCTCTGCATCACATTTGTTTGGATGCAGAAAGATAAAATTTAGTTTGGCCAGAGATTATAGTATTAGCTTTGTTTTAAGCTTTCTCTGATGGTCTGTTCATCTGATTGTTATGAAAATTTGTGTGGCCTAGCTATTTATCAAGTAACCCATTACAGAAACCTCCTTCAACCTTAAAAATATTGGTTTTTCTTCTTCTCATGTTGACTTTATTTTTCCCTCTTCTGATTTATAGGTGGCTGACAGTGACCTTGATAGGACTTTGAGTTCTGACAAGAGGATCGGGTACACATCCGTGCTCTTTTATGCTTCGTGGTGCCCGTTTTCTCTCCATTTGCGCCGCACGTTTGAATCTCTCAGTTTCTTGTTTCCTCAAATAGAACACTTGTTGGTTGAGCAGTCTTCTGCACTACCAAAGTAAGTATCCCTGATTTGATTTTCTTTCTGTACTTAAAGTTGAAGGGTCTGTTTTTTCTGTGCAGCATGAACATGAAGCTTTCTATGTTCTTTATATTTGATTCCAATAACAGTTGCCCCATCTGATAAGATGAGAAATAGAAATTGAAGGCCCATTTTGTAGCTATTTCGTTTTTTGTTTTCGGTTTTTAAAAATTAAGTATGAAAACACAATTTCCACTTTTGTGTTTCTTTGTTTTATATTCTACCCAAGTATGATTTTTAAAAATAGAAAATAAAAAACGAAATAGTTATGAAAAGGGCGGAGCAATTACATGTTTTTTTAAGTGCTAATGAGATTCTCTCTTTCTGGCACTGAAATTAGAATAGAATAGAACAATCTTGCTCTTGCTTGTCATGTCAACAACCTCTAATCTTATATGTTTGGCTTTTCGTATTTTAGTGTACTCTCAAGATATGGAGTCCACAGCTTCCCATCTATATTGCTAGTGAACGGGACTTCACGTGTTCGATATCGTGGTCAGAAAGATATCCTTTCGCTTGTCCATTTCTATAAACGAGCAACAGGTGAGGTCTCTTTGTGTTCTCATAGAGTGGTGTGTGTGGATCAAAACAAGTTGTGTTAGGTGAGTGTACTGTATATCTTAATCATTCTTTCATTATGTCAGGATTAAAACCTGTTCCATATTATAATGATCACGAGTTAGTTGCAATCGAGAGTTTTGGAAAGCCGATAATCCAACTGCCGAAGACTACTTCGTCACCAAACAACATTTTGAAGGGCGAACCGTTGTTGACATTCTCCATTGTATTCATCTGTCTTCGTCTAGCAATTTCCAAATTACCACATGTTCTATGTCACCTAAGCAACCTCTGGAGATCCTACAAACCCCACCTAAATTTGGAAATATTTGGCGAAACACGACAACTTATGGGGTGCATTCTTCACATGGTCGATATAAGAAGGGTGTGGGCCAAGCTGAGGCTATGCAAGACAAAGAACTTCCACAAGGGAGCAAGGAACGCTCGTGTTTGGGCATCGTCTCTTGCATCTGTCTCGTTGGGTGAATCTTCATCCTCGAGATCGGCT ATGCCTGCCTTTTCTTCCATTTTCGTTTCTCTCTTTGCCCTCTTCTCTCTTCTAGGGTTTGCGTCTTCAACATCTCCTTCCCGATCTTCATTTTGCCCTAAAGAATCAGATGTCTTCCTCTGTGGTGTTCGATCTCAATGCCCCTCCTCTTTGATTCCCAGCTCGCCTTTACAGGTGGCTGACAGTGACCTTGATAGGACTTTGAGTTCTGACAAGAGGATCGGGTACACATCCGTGCTCTTTTATGCTTCGTGGTGCCCGTTTTCTCTCCATTTGCGCCGCACGTTTGAATCTCTCAGTTTCTTGTTTCCTCAAATAGAACACTTGTTGGTTGAGCAGTCTTCTGCACTACCAAATGTACTCTCAAGATATGGAGTCCACAGCTTCCCATCTATATTGCTAGTGAACGGGACTTCACGTGTTCGATATCGTGGTCAGAAAGATATCCTTTCGCTTGTCCATTTCTATAAACGAGCAACAGGATTAAAACCTGTTCCATATTATAATGATCACGAGTTAGTTGCAATCGAGAGTTTTGGAAAGCCGATAATCCAACTGCCGAAGACTACTTCGTCACCAAACAACATTTTGAAGGGCGAACCGTTGTTGACATTCTCCATTGTATTCATCTGTCTTCGTCTAGCAATTTCCAAATTACCACATGTTCTATGTCACCTAAGCAACCTCTGGAGATCCTACAAACCCCACCTAAATTTGGAAATATTTGGCGAAACACGACAACTTATGGGGTGCATTCTTCACATGGTCGATATAAGAAGGGTGTGGGCCAAGCTGAGGCTATGCAAGACAAAGAACTTCCACAAGGGAGCAAGGAACGCTCGTGTTTGGGCATCGTCTCTTGCATCTGTCTCGTTGGGTGAATCTTCATCCTCGAGATCGGCT ATGCCTGCCTTTTCTTCCATTTTCGTTTCTCTCTTTGCCCTCTTCTCTCTTCTAGGGTTTGCGTCTTCAACATCTCCTTCCCGATCTTCATTTTGCCCTAAAGAATCAGATGTCTTCCTCTGTGGTGTTCGATCTCAATGCCCCTCCTCTTTGATTCCCAGCTCGCCTTTACAGGTGGCTGACAGTGACCTTGATAGGACTTTGAGTTCTGACAAGAGGATCGGGTACACATCCGTGCTCTTTTATGCTTCGTGGTGCCCGTTTTCTCTCCATTTGCGCCGCACGTTTGAATCTCTCAGTTTCTTGTTTCCTCAAATAGAACACTTGTTGGTTGAGCAGTCTTCTGCACTACCAAATGTACTCTCAAGATATGGAGTCCACAGCTTCCCATCTATATTGCTAGTGAACGGGACTTCACGTGTTCGATATCGTGGTCAGAAAGATATCCTTTCGCTTGTCCATTTCTATAAACGAGCAACAGGATTAAAACCTGTTCCATATTATAATGATCACGAGTTAGTTGCAATCGAGAGTTTTGGAAAGCCGATAATCCAACTGCCGAAGACTACTTCGTCACCAAACAACATTTTGAAGGGCGAACCGTTGTTGACATTCTCCATTGTATTCATCTGTCTTCGTCTAGCAATTTCCAAATTACCACATGTTCTATGTCACCTAAGCAACCTCTGGAGATCCTACAAACCCCACCTAAATTTGGAAATATTTGGCGAAACACGACAACTTATGGGGTGCATTCTTCACATGGTCGATATAAGAAGGGTGTGGGCCAAGCTGAGGCTATGCAAGACAAAGAACTTCCACAAGGGAGCAAGGAACGCTCGTGTTTGGGCATCGTCTCTTGCATCTGTCTCGTTGGGTGAATCTTCATCCTCGAGATCGGCT MPAFSSIFVSLFALFSLLGFASSTSPSRSSFCPKESDVFLCGVRSQCPSSLIPSSPLQVADSDLDRTLSSDKRIGYTSVLFYASWCPFSLHLRRTFESLSFLFPQIEHLLVEQSSALPNVLSRYGVHSFPSILLVNGTSRVRYRGQKDILSLVHFYKRATGLKPVPYYNDHELVAIESFGKPIIQLPKTTSSPNNILKGEPLLTFSIVFICLRLAISKLPHVLCHLSNLWRSYKPHLNLEIFGETRQLMGCILHMVDIRRVWAKLRLCKTKNFHKGARNARVWASSLASVSLGESSSSRSA Homology
BLAST of MS017074.1 vs. NCBI nr
Match: XP_022156202.1 (5'-adenylylsulfate reductase-like 5 [Momordica charantia]) HSP 1 Score: 589.0 bits (1517), Expect = 2.4e-164 Identity = 298/301 (99.00%), Postives = 298/301 (99.00%), Query Frame = 0
BLAST of MS017074.1 vs. NCBI nr
Match: XP_038882174.1 (5'-adenylylsulfate reductase-like 5 [Benincasa hispida]) HSP 1 Score: 452.6 bits (1163), Expect = 2.7e-123 Identity = 240/300 (80.00%), Postives = 257/300 (85.67%), Query Frame = 0
BLAST of MS017074.1 vs. NCBI nr
Match: XP_008441988.1 (PREDICTED: 5'-adenylylsulfate reductase-like 5 [Cucumis melo]) HSP 1 Score: 441.0 bits (1133), Expect = 8.0e-120 Identity = 234/300 (78.00%), Postives = 256/300 (85.33%), Query Frame = 0
BLAST of MS017074.1 vs. NCBI nr
Match: XP_004147538.1 (5'-adenylylsulfate reductase-like 5 [Cucumis sativus] >KAE8649373.1 hypothetical protein Csa_021564 [Cucumis sativus]) HSP 1 Score: 432.2 bits (1110), Expect = 3.7e-117 Identity = 229/300 (76.33%), Postives = 252/300 (84.00%), Query Frame = 0
BLAST of MS017074.1 vs. NCBI nr
Match: KAG6595500.1 (5'-adenylylsulfate reductase-like 5, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 426.4 bits (1095), Expect = 2.0e-115 Identity = 226/300 (75.33%), Postives = 248/300 (82.67%), Query Frame = 0
BLAST of MS017074.1 vs. ExPASy Swiss-Prot
Match: Q93YX4 (5'-adenylylsulfate reductase-like 5 OS=Arabidopsis thaliana OX=3702 GN=APRL5 PE=2 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 2.3e-69 Identity = 141/296 (47.64%), Postives = 191/296 (64.53%), Query Frame = 0
BLAST of MS017074.1 vs. ExPASy Swiss-Prot
Match: Q84JN1 (5'-adenylylsulfate reductase-like 7 OS=Arabidopsis thaliana OX=3702 GN=APRL7 PE=2 SV=1) HSP 1 Score: 244.2 bits (622), Expect = 1.9e-63 Identity = 133/292 (45.55%), Postives = 185/292 (63.36%), Query Frame = 0
BLAST of MS017074.1 vs. ExPASy Swiss-Prot
Match: Q84M47 (5'-adenylylsulfate reductase-like 5 OS=Oryza sativa subsp. japonica OX=39947 GN=APRL5 PE=2 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 8.2e-51 Identity = 124/277 (44.77%), Postives = 171/277 (61.73%), Query Frame = 0
BLAST of MS017074.1 vs. ExPASy Swiss-Prot
Match: Q2QP53 (5'-adenylylsulfate reductase-like 6 OS=Oryza sativa subsp. japonica OX=39947 GN=APRL6 PE=3 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 7.2e-47 Identity = 116/297 (39.06%), Postives = 166/297 (55.89%), Query Frame = 0
BLAST of MS017074.1 vs. ExPASy Swiss-Prot
Match: Q9SA00 (5'-adenylylsulfate reductase-like 4 OS=Arabidopsis thaliana OX=3702 GN=APRL4 PE=2 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 2.7e-33 Identity = 87/229 (37.99%), Postives = 125/229 (54.59%), Query Frame = 0
BLAST of MS017074.1 vs. ExPASy TrEMBL
Match: A0A6J1DRE6 (5'-adenylylsulfate reductase-like 5 OS=Momordica charantia OX=3673 GN=LOC111023147 PE=4 SV=1) HSP 1 Score: 589.0 bits (1517), Expect = 1.2e-164 Identity = 298/301 (99.00%), Postives = 298/301 (99.00%), Query Frame = 0
BLAST of MS017074.1 vs. ExPASy TrEMBL
Match: A0A1S3B4P1 (5'-adenylylsulfate reductase-like 5 OS=Cucumis melo OX=3656 GN=LOC103485985 PE=4 SV=1) HSP 1 Score: 441.0 bits (1133), Expect = 3.9e-120 Identity = 234/300 (78.00%), Postives = 256/300 (85.33%), Query Frame = 0
BLAST of MS017074.1 vs. ExPASy TrEMBL
Match: A0A6J1EB07 (5'-adenylylsulfate reductase-like 5 OS=Cucurbita moschata OX=3662 GN=LOC111432379 PE=4 SV=1) HSP 1 Score: 426.4 bits (1095), Expect = 9.9e-116 Identity = 226/300 (75.33%), Postives = 249/300 (83.00%), Query Frame = 0
BLAST of MS017074.1 vs. ExPASy TrEMBL
Match: A0A6J1ISH7 (5'-adenylylsulfate reductase-like 5 OS=Cucurbita maxima OX=3661 GN=LOC111478288 PE=4 SV=1) HSP 1 Score: 420.2 bits (1079), Expect = 7.1e-114 Identity = 223/298 (74.83%), Postives = 245/298 (82.21%), Query Frame = 0
BLAST of MS017074.1 vs. ExPASy TrEMBL
Match: A0A6J1GD82 (5'-adenylylsulfate reductase-like 5 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453116 PE=4 SV=1) HSP 1 Score: 416.0 bits (1068), Expect = 1.3e-112 Identity = 221/298 (74.16%), Postives = 243/298 (81.54%), Query Frame = 0
BLAST of MS017074.1 vs. TAIR 10
Match: AT3G03860.1 (APR-like 5 ) HSP 1 Score: 263.8 bits (673), Expect = 1.6e-70 Identity = 141/296 (47.64%), Postives = 191/296 (64.53%), Query Frame = 0
BLAST of MS017074.1 vs. TAIR 10
Match: AT5G18120.1 (APR-like 7 ) HSP 1 Score: 244.2 bits (622), Expect = 1.3e-64 Identity = 133/292 (45.55%), Postives = 185/292 (63.36%), Query Frame = 0
BLAST of MS017074.1 vs. TAIR 10
Match: AT1G34780.1 (APR-like 4 ) HSP 1 Score: 144.1 bits (362), Expect = 1.9e-34 Identity = 87/229 (37.99%), Postives = 125/229 (54.59%), Query Frame = 0
BLAST of MS017074.1 vs. TAIR 10
Match: AT4G08930.1 (APR-like 6 ) HSP 1 Score: 127.9 bits (320), Expect = 1.4e-29 Identity = 98/301 (32.56%), Postives = 149/301 (49.50%), Query Frame = 0
BLAST of MS017074.1 vs. TAIR 10
Match: AT1G34780.2 (APR-like 4 ) HSP 1 Score: 112.1 bits (279), Expect = 7.9e-25 Identity = 78/229 (34.06%), Postives = 109/229 (47.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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