MS016059.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS016059.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	CRAL-TRIO domain-containing protein
Location	scaffold9_2: 33092 .. 33943 (+)
Sequence length	624
RNA-Seq Expression	MS016059.1
Synteny	MS016059.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACTCTACTTCTTCGATTTCATCCCTCTCTCCCCCCGACCAACTTCACCTCCTTCGGAAAGTCGAGGTTTTTAACCTCCATGGTCGTGATAAAGCTGGCCGGAATGTCCTCCTCATTGTCGGGAAATACTTTCCAGGTACTCAAATTTGAAGAACCCATTTGAAACTTGTGCAGGCACTTAATTGACATCAATTCAAGACCAAACTTATAGTTTGCTCTCTGTTTTACTTGTGGTGGTTGTTCTTTTGGATTCAGCTCGGTTTGTGAGCAGCGAGGCCGTGAGTTTTTACCTCAAAGACAAGATTTTCCCCGCCCTGAAAGAAGGGCCGTTCACGGTGGTCTACGTCCACACAGACGTTCACTGGACTGAGAATTTCCCCGGAGTCTCCTACCTGAAGGCAATCTGCGATGCCATCCCAATCACCGTTAAGAACAGCATAGAAGCTGTTTATTTTGTCCACCCTGGTCTGCAGTCCCGTCTCTTCTTCGCCACCGTCGGCCGGTTCATGCTCGGAGCCGGGTAAGGATTCTTCCTCCTGTATGCCCTGAATTTGAATTTCCACTGCACAAAGAAGTAAAAATACCAAATCTTATGGTGGGATATCTGGGTTCTTCTTTCTGATTTGCAGGCTATATAACAAGCTGAAATATGTGAAAAGGGTGGAGTTTCTATGGGAGTATGTTAGAAGGAAAGAGATGGAGTTACCGAAGTTCGTGTATGATCATGATCAGAAATTGGAGTTCTGCCCGGTGGTTTACTCTAGTTTAGAAAATGATTACCTCAGGGTCTTCTCCGCCGTGCCGTCGCTGGACTCGCCGGTTCCTACTTACTCCATGCGGTGTTTTGCC

mRNA sequence

ATGAACTCTACTTCTTCGATTTCATCCCTCTCTCCCCCCGACCAACTTCACCTCCTTCGGAAAGTCGAGGTTTTTAACCTCCATGGTCGTGATAAAGCTGGCCGGAATGTCCTCCTCATTGTCGGGAAATACTTTCCAGCTCGGTTTGTGAGCAGCGAGGCCGTGAGTTTTTACCTCAAAGACAAGATTTTCCCCGCCCTGAAAGAAGGGCCGTTCACGGTGGTCTACGTCCACACAGACGTTCACTGGACTGAGAATTTCCCCGGAGTCTCCTACCTGAAGGCAATCTGCGATGCCATCCCAATCACCGTTAAGAACAGCATAGAAGCTGTTTATTTTGTCCACCCTGGTCTGCAGTCCCGTCTCTTCTTCGCCACCGTCGGCCGGTTCATGCTCGGAGCCGGGCTATATAACAAGCTGAAATATGTGAAAAGGGTGGAGTTTCTATGGGAGTATGTTAGAAGGAAAGAGATGGAGTTACCGAAGTTCGTGTATGATCATGATCAGAAATTGGAGTTCTGCCCGGTGGTTTACTCTAGTTTAGAAAATGATTACCTCAGGGTCTTCTCCGCCGTGCCGTCGCTGGACTCGCCGGTTCCTACTTACTCCATGCGGTGTTTTGCC

Coding sequence (CDS)

ATGAACTCTACTTCTTCGATTTCATCCCTCTCTCCCCCCGACCAACTTCACCTCCTTCGGAAAGTCGAGGTTTTTAACCTCCATGGTCGTGATAAAGCTGGCCGGAATGTCCTCCTCATTGTCGGGAAATACTTTCCAGCTCGGTTTGTGAGCAGCGAGGCCGTGAGTTTTTACCTCAAAGACAAGATTTTCCCCGCCCTGAAAGAAGGGCCGTTCACGGTGGTCTACGTCCACACAGACGTTCACTGGACTGAGAATTTCCCCGGAGTCTCCTACCTGAAGGCAATCTGCGATGCCATCCCAATCACCGTTAAGAACAGCATAGAAGCTGTTTATTTTGTCCACCCTGGTCTGCAGTCCCGTCTCTTCTTCGCCACCGTCGGCCGGTTCATGCTCGGAGCCGGGCTATATAACAAGCTGAAATATGTGAAAAGGGTGGAGTTTCTATGGGAGTATGTTAGAAGGAAAGAGATGGAGTTACCGAAGTTCGTGTATGATCATGATCAGAAATTGGAGTTCTGCCCGGTGGTTTACTCTAGTTTAGAAAATGATTACCTCAGGGTCTTCTCCGCCGTGCCGTCGCTGGACTCGCCGGTTCCTACTTACTCCATGCGGTGTTTTGCC

Protein sequence

MNSTSSISSLSPPDQLHLLRKVEVFNLHGRDKAGRNVLLIVGKYFPARFVSSEAVSFYLKDKIFPALKEGPFTVVYVHTDVHWTENFPGVSYLKAICDAIPITVKNSIEAVYFVHPGLQSRLFFATVGRFMLGAGLYNKLKYVKRVEFLWEYVRRKEMELPKFVYDHDQKLEFCPVVYSSLENDYLRVFSAVPSLDSPVPTYSMRCFA

Homology

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BLAST of MS016059.1 vs. NCBI nr
Match: XP_022144248.1 (uncharacterized protein LOC111013979 [Momordica charantia])

HSP 1 Score: 419.9 bits (1078), Expect = 1.3e-113
Identity = 206/208 (99.04%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 1   MNSTSSISSLSPPDQLHLLRKVEVFNLHGRDKAGRNVLLIVGKYFPARFVSSEAVSFYLK 60
           MNS+SSISSLS PDQLHLLRKVEVFNLHGRDKAGRNVLLIVGKYFPARFVSSEAVSFYLK
Sbjct: 1   MNSSSSISSLSLPDQLHLLRKVEVFNLHGRDKAGRNVLLIVGKYFPARFVSSEAVSFYLK 60

Query: 61  DKIFPALKEGPFTVVYVHTDVHWTENFPGVSYLKAICDAIPITVKNSIEAVYFVHPGLQS 120
           DKIFPALKEGPFTVVYVHTDVHWTENFPGVSYLKAICDAIPITVKNSIEAVYFVHPGLQS
Sbjct: 61  DKIFPALKEGPFTVVYVHTDVHWTENFPGVSYLKAICDAIPITVKNSIEAVYFVHPGLQS 120

Query: 121 RLFFATVGRFMLGAGLYNKLKYVKRVEFLWEYVRRKEMELPKFVYDHDQKLEFCPVVYSS 180
           RLFFATVGRFMLGAGLYNKLKYVKRVEFLWEYVRRKEMELPKFVYDHDQKLEFCPVVYSS
Sbjct: 121 RLFFATVGRFMLGAGLYNKLKYVKRVEFLWEYVRRKEMELPKFVYDHDQKLEFCPVVYSS 180

Query: 181 LENDYLRVFSAVPSLDSPVPTYSMRCFA 209
           LENDYLRVFSAVPSLDSPVPTYSMRCFA
Sbjct: 181 LENDYLRVFSAVPSLDSPVPTYSMRCFA 208

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BLAST of MS016059.1 vs. NCBI nr
Match: XP_031737047.1 (ganglioside-induced differentiation-associated-protein 2-like [Cucumis sativus] >KGN62279.1 hypothetical protein Csa_018770 [Cucumis sativus])

HSP 1 Score: 341.7 bits (875), Expect = 4.6e-90
Identity = 168/208 (80.77%), Postives = 187/208 (89.90%), Query Frame = 0


Query: 1   MNSTSSISSLSPPDQLHLLRKVEVFNLHGRDKAGRNVLLIVGKYFPARFVSSEAVSFYLK 60
           M+ +SS SSLS  DQLHLL KVEVF LHGRDKAGRNVLLIVGKYFPARFVSS+AV+ YLK
Sbjct: 1   MSYSSSSSSLS--DQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLK 60

Query: 61  DKIFPALKEGPFTVVYVHTDVHWTENFPGVSYLKAICDAIPITVKNSIEAVYFVHPGLQS 120
           DKIFP LK+GPFTVVY+HTDVHWTEN PG+S LKAI +AIPIT+KN+IEAVYF+HP LQ+
Sbjct: 61  DKIFPLLKDGPFTVVYIHTDVHWTENLPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQT 120

Query: 121 RLFFATVGRFMLGAGLYNKLKYVKRVEFLWEYVRRKEMELPKFVYDHDQKLEFCPVVYSS 180
           R+FFATVGR ML A LYNK+KYVKRVEFLWE+VRRKEM+LPKFVYDHD+KLEFCPV+ S 
Sbjct: 121 RVFFATVGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMDLPKFVYDHDEKLEFCPVMESD 180

Query: 181 LENDYLRVFSAVPSLDSPVPTYSMRCFA 209
           LENDYLRVFS  PSL+S V TYSMRCFA
Sbjct: 181 LENDYLRVFSPSPSLNSGVSTYSMRCFA 206

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BLAST of MS016059.1 vs. NCBI nr
Match: XP_016899965.1 (PREDICTED: ganglioside-induced differentiation-associated protein 2-like [Cucumis melo])

HSP 1 Score: 340.1 bits (871), Expect = 1.3e-89
Identity = 170/208 (81.73%), Postives = 187/208 (89.90%), Query Frame = 0


Query: 1   MNSTSSISSLSPPDQLHLLRKVEVFNLHGRDKAGRNVLLIVGKYFPARFVSSEAVSFYLK 60
           MN +SS SSLS  DQLHLL KVEVF LHGRDKAGRNVLLIVGKYFPARFVSS+AV+ YLK
Sbjct: 1   MNCSSS-SSLS--DQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLK 60

Query: 61  DKIFPALKEGPFTVVYVHTDVHWTENFPGVSYLKAICDAIPITVKNSIEAVYFVHPGLQS 120
           DKIFP LK+GPFTVVY+HTDVHWTEN PG+S LKAI +AIPIT+KN+IEAVYF+HP LQ+
Sbjct: 61  DKIFPLLKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQT 120

Query: 121 RLFFATVGRFMLGAGLYNKLKYVKRVEFLWEYVRRKEMELPKFVYDHDQKLEFCPVVYSS 180
           R+FFATVGR ML A LYNK+KYVKRVEFLWE+VRRKEMELPKFVYDHD+KLEFCPV+ S 
Sbjct: 121 RVFFATVGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMELPKFVYDHDEKLEFCPVMDSD 180

Query: 181 LENDYLRVFSAVPSLDSPVPTYSMRCFA 209
           LENDYLRVFS  PSL+S V TYSMRCFA
Sbjct: 181 LENDYLRVFSPSPSLNSGVSTYSMRCFA 205

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BLAST of MS016059.1 vs. NCBI nr
Match: KAA0064859.1 (ganglioside-induced differentiation-associated protein 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 339.3 bits (869), Expect = 2.3e-89
Identity = 165/201 (82.09%), Postives = 181/201 (90.05%), Query Frame = 0


Query: 8   SSLSPPDQLHLLRKVEVFNLHGRDKAGRNVLLIVGKYFPARFVSSEAVSFYLKDKIFPAL 67
           SS S  DQLHLL KVEVF LHGRDKAGRNVLLIVGKYFPARFVSS+AV+ YLKDKIFP L
Sbjct: 4   SSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPLL 63

Query: 68  KEGPFTVVYVHTDVHWTENFPGVSYLKAICDAIPITVKNSIEAVYFVHPGLQSRLFFATV 127
           K+GPFTVVY+HTDVHWTEN PG+S LKAI +AIPIT+KN+IEAVYF+HP LQ+R+FFATV
Sbjct: 64  KDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFATV 123

Query: 128 GRFMLGAGLYNKLKYVKRVEFLWEYVRRKEMELPKFVYDHDQKLEFCPVVYSSLENDYLR 187
           GR ML A LYNK+KYVKRVEFLWE+VRRKEMELPKFVYDHD+KLEFCPV+ S LENDYLR
Sbjct: 124 GRLMLDAELYNKVKYVKRVEFLWEHVRRKEMELPKFVYDHDEKLEFCPVMDSDLENDYLR 183

Query: 188 VFSAVPSLDSPVPTYSMRCFA 209
           VFS  PSL+S V TYSMRCFA
Sbjct: 184 VFSPSPSLNSGVSTYSMRCFA 204

[Close]

BLAST of MS016059.1 vs. NCBI nr
Match: XP_038884815.1 (ganglioside-induced differentiation-associated protein 2-like [Benincasa hispida])

HSP 1 Score: 335.1 bits (858), Expect = 4.3e-88
Identity = 164/203 (80.79%), Postives = 182/203 (89.66%), Query Frame = 0


Query: 9   SLSPP--DQLHLLRKVEVFNLHGRDKAGRNVLLIVGKYFPARFVSSEAVSFYLKDKIFPA 68
           S SPP  DQLHLL KVEVF LHGRDKA RNVLLIVGKYFPARFVSS+AV+ YLKDKIFP 
Sbjct: 4   SSSPPLSDQLHLLEKVEVFKLHGRDKARRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPF 63

Query: 69  LK-EGPFTVVYVHTDVHWTENFPGVSYLKAICDAIPITVKNSIEAVYFVHPGLQSRLFFA 128
           LK +GPFTVVY+HTDVHWTENFPG+S LKAI +AIPIT+K +IEAVYF+HPGLQ+R+FFA
Sbjct: 64  LKDDGPFTVVYIHTDVHWTENFPGISNLKAIYEAIPITIKKNIEAVYFLHPGLQARMFFA 123

Query: 129 TVGRFMLGAGLYNKLKYVKRVEFLWEYVRRKEMELPKFVYDHDQKLEFCPVVYSSLENDY 188
           TVGR ML A LYNK+KYVKRVEFLWEYVRRKEMELP+FVYDHD+KLEFCPV+ S LENDY
Sbjct: 124 TVGRLMLDAELYNKVKYVKRVEFLWEYVRRKEMELPQFVYDHDEKLEFCPVMDSDLENDY 183

Query: 189 LRVFSAVPSLDSPVPTYSMRCFA 209
           LR+FS  PS+D+ V TYSMRCFA
Sbjct: 184 LRLFSPSPSVDAAVSTYSMRCFA 206

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BLAST of MS016059.1 vs. ExPASy Swiss-Prot
Match: Q7JUR6 (Protein GDAP2 homolog OS=Drosophila melanogaster OX=7227 GN=Gdap2 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.3e-12
Identity = 40/140 (28.57%), Postives = 76/140 (54.29%), Query Frame = 0


Query: 29  GRDKAGRNVLLIVGKYFPARFVSSEAVSFYLKDKIFPALKEGPFTVVYVHTDVHWTENFP 88
           G D+ GR V++  GK+FPA+ +  E    YL   + P +K G + + Y HT +  T N+P
Sbjct: 388 GVDRLGRPVIVFCGKWFPAQNIDLEKALLYLIKLLDPIVK-GDYVISYFHT-LTSTNNYP 447

Query: 89  GVSYLKAICDAIPITVKNSIEAVYFVHPGLQSRLFFATVGRFMLGAGLYNKLKYVKRVEF 148
            + +L+ +   +P   K +++A Y VHP   +++       FM  A +  K+  +  VE 
Sbjct: 448 SLHWLREVYSVLPYKYKKNLKAFYIVHPTFWTKMMTWWFTTFMAPA-IKAKVHSLPGVEH 507

Query: 149 LWEYVRRKEMELPKFVYDHD 169
           L+  + + ++E+P ++ ++D
Sbjct: 508 LYSAITKDQLEIPAYITEYD 524

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BLAST of MS016059.1 vs. ExPASy Swiss-Prot
Match: Q292F9 (Protein GDAP2 homolog OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=GA15091 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.3e-12
Identity = 40/140 (28.57%), Postives = 76/140 (54.29%), Query Frame = 0


Query: 29  GRDKAGRNVLLIVGKYFPARFVSSEAVSFYLKDKIFPALKEGPFTVVYVHTDVHWTENFP 88
           G D+ GR V++  GK+FPA+ +  E    YL   + P +K G + + Y HT +  T N+P
Sbjct: 390 GVDRLGRPVIVFCGKWFPAQNIDLEKALLYLIKLLDPIVK-GDYVISYFHT-LTSTNNYP 449

Query: 89  GVSYLKAICDAIPITVKNSIEAVYFVHPGLQSRLFFATVGRFMLGAGLYNKLKYVKRVEF 148
            + +L+ +   +P   K +++A Y VHP   +++       FM  A +  K+  +  VE 
Sbjct: 450 SLHWLREVYSVLPYKYKKNLKAFYIVHPTFWTKMMTWWFTTFMAPA-IKAKVHSLPGVEH 509

Query: 149 LWEYVRRKEMELPKFVYDHD 169
           L+  + + ++E+P ++ ++D
Sbjct: 510 LYSAITKDQLEIPAYITEYD 526

[Close]

BLAST of MS016059.1 vs. ExPASy TrEMBL
Match: A0A6J1CST5 (uncharacterized protein LOC111013979 OS=Momordica charantia OX=3673 GN=LOC111013979 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 6.4e-114
Identity = 206/208 (99.04%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 1   MNSTSSISSLSPPDQLHLLRKVEVFNLHGRDKAGRNVLLIVGKYFPARFVSSEAVSFYLK 60
           MNS+SSISSLS PDQLHLLRKVEVFNLHGRDKAGRNVLLIVGKYFPARFVSSEAVSFYLK
Sbjct: 1   MNSSSSISSLSLPDQLHLLRKVEVFNLHGRDKAGRNVLLIVGKYFPARFVSSEAVSFYLK 60

Query: 61  DKIFPALKEGPFTVVYVHTDVHWTENFPGVSYLKAICDAIPITVKNSIEAVYFVHPGLQS 120
           DKIFPALKEGPFTVVYVHTDVHWTENFPGVSYLKAICDAIPITVKNSIEAVYFVHPGLQS
Sbjct: 61  DKIFPALKEGPFTVVYVHTDVHWTENFPGVSYLKAICDAIPITVKNSIEAVYFVHPGLQS 120

Query: 121 RLFFATVGRFMLGAGLYNKLKYVKRVEFLWEYVRRKEMELPKFVYDHDQKLEFCPVVYSS 180
           RLFFATVGRFMLGAGLYNKLKYVKRVEFLWEYVRRKEMELPKFVYDHDQKLEFCPVVYSS
Sbjct: 121 RLFFATVGRFMLGAGLYNKLKYVKRVEFLWEYVRRKEMELPKFVYDHDQKLEFCPVVYSS 180

Query: 181 LENDYLRVFSAVPSLDSPVPTYSMRCFA 209
           LENDYLRVFSAVPSLDSPVPTYSMRCFA
Sbjct: 181 LENDYLRVFSAVPSLDSPVPTYSMRCFA 208

[Close]

BLAST of MS016059.1 vs. ExPASy TrEMBL
Match: A0A0A0LML6 (CRAL-TRIO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G348170 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 2.2e-90
Identity = 168/208 (80.77%), Postives = 187/208 (89.90%), Query Frame = 0


Query: 1   MNSTSSISSLSPPDQLHLLRKVEVFNLHGRDKAGRNVLLIVGKYFPARFVSSEAVSFYLK 60
           M+ +SS SSLS  DQLHLL KVEVF LHGRDKAGRNVLLIVGKYFPARFVSS+AV+ YLK
Sbjct: 1   MSYSSSSSSLS--DQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLK 60

Query: 61  DKIFPALKEGPFTVVYVHTDVHWTENFPGVSYLKAICDAIPITVKNSIEAVYFVHPGLQS 120
           DKIFP LK+GPFTVVY+HTDVHWTEN PG+S LKAI +AIPIT+KN+IEAVYF+HP LQ+
Sbjct: 61  DKIFPLLKDGPFTVVYIHTDVHWTENLPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQT 120

Query: 121 RLFFATVGRFMLGAGLYNKLKYVKRVEFLWEYVRRKEMELPKFVYDHDQKLEFCPVVYSS 180
           R+FFATVGR ML A LYNK+KYVKRVEFLWE+VRRKEM+LPKFVYDHD+KLEFCPV+ S 
Sbjct: 121 RVFFATVGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMDLPKFVYDHDEKLEFCPVMESD 180

Query: 181 LENDYLRVFSAVPSLDSPVPTYSMRCFA 209
           LENDYLRVFS  PSL+S V TYSMRCFA
Sbjct: 181 LENDYLRVFSPSPSLNSGVSTYSMRCFA 206

[Close]

BLAST of MS016059.1 vs. ExPASy TrEMBL
Match: A0A1S4DW79 (ganglioside-induced differentiation-associated protein 2-like OS=Cucumis melo OX=3656 GN=LOC107990288 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 6.4e-90
Identity = 170/208 (81.73%), Postives = 187/208 (89.90%), Query Frame = 0


Query: 1   MNSTSSISSLSPPDQLHLLRKVEVFNLHGRDKAGRNVLLIVGKYFPARFVSSEAVSFYLK 60
           MN +SS SSLS  DQLHLL KVEVF LHGRDKAGRNVLLIVGKYFPARFVSS+AV+ YLK
Sbjct: 1   MNCSSS-SSLS--DQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLK 60

Query: 61  DKIFPALKEGPFTVVYVHTDVHWTENFPGVSYLKAICDAIPITVKNSIEAVYFVHPGLQS 120
           DKIFP LK+GPFTVVY+HTDVHWTEN PG+S LKAI +AIPIT+KN+IEAVYF+HP LQ+
Sbjct: 61  DKIFPLLKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQT 120

Query: 121 RLFFATVGRFMLGAGLYNKLKYVKRVEFLWEYVRRKEMELPKFVYDHDQKLEFCPVVYSS 180
           R+FFATVGR ML A LYNK+KYVKRVEFLWE+VRRKEMELPKFVYDHD+KLEFCPV+ S 
Sbjct: 121 RVFFATVGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMELPKFVYDHDEKLEFCPVMDSD 180

Query: 181 LENDYLRVFSAVPSLDSPVPTYSMRCFA 209
           LENDYLRVFS  PSL+S V TYSMRCFA
Sbjct: 181 LENDYLRVFSPSPSLNSGVSTYSMRCFA 205

[Close]

BLAST of MS016059.1 vs. ExPASy TrEMBL
Match: A0A5A7VHB1 (Ganglioside-induced differentiation-associated protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001720 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 1.1e-89
Identity = 165/201 (82.09%), Postives = 181/201 (90.05%), Query Frame = 0


Query: 8   SSLSPPDQLHLLRKVEVFNLHGRDKAGRNVLLIVGKYFPARFVSSEAVSFYLKDKIFPAL 67
           SS S  DQLHLL KVEVF LHGRDKAGRNVLLIVGKYFPARFVSS+AV+ YLKDKIFP L
Sbjct: 4   SSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPLL 63

Query: 68  KEGPFTVVYVHTDVHWTENFPGVSYLKAICDAIPITVKNSIEAVYFVHPGLQSRLFFATV 127
           K+GPFTVVY+HTDVHWTEN PG+S LKAI +AIPIT+KN+IEAVYF+HP LQ+R+FFATV
Sbjct: 64  KDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFATV 123

Query: 128 GRFMLGAGLYNKLKYVKRVEFLWEYVRRKEMELPKFVYDHDQKLEFCPVVYSSLENDYLR 187
           GR ML A LYNK+KYVKRVEFLWE+VRRKEMELPKFVYDHD+KLEFCPV+ S LENDYLR
Sbjct: 124 GRLMLDAELYNKVKYVKRVEFLWEHVRRKEMELPKFVYDHDEKLEFCPVMDSDLENDYLR 183

Query: 188 VFSAVPSLDSPVPTYSMRCFA 209
           VFS  PSL+S V TYSMRCFA
Sbjct: 184 VFSPSPSLNSGVSTYSMRCFA 204

[Close]

BLAST of MS016059.1 vs. ExPASy TrEMBL
Match: A0A6J1KC43 (protein GDAP2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111491951 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 8.2e-85
Identity = 156/204 (76.47%), Postives = 182/204 (89.22%), Query Frame = 0


Query: 6   SISSLSPPDQLHLLRKVEVFNLHGRDKAGRNVLLIVGKYFPARFVSSEAVSFYLKDKIFP 65
           S+SS S  DQLHLL K EVF LHGRD+AGRNV LIVGK+FPARFVS++AV+ YLKDKIFP
Sbjct: 4   SVSS-SLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYLKDKIFP 63

Query: 66  ALKEGPFTVVYVHTDVHWTENFPGVSYLKAICDAIPITVKNSIEAVYFVHPGLQSRLFFA 125
            +K+GPFT+VY+HTDVHWTENFPG+S LKAI + IP  +KN+++AVYFVHPGLQ+RLFFA
Sbjct: 64  FVKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTNIKNNLKAVYFVHPGLQARLFFA 123

Query: 126 TVGRFMLGAGLYNKLKYVKRVEFLWEYVRRKEMELPKFVYDHDQKLEFCPVVYSSLENDY 185
           TVGR +LGA LYNK+KYVKRVEFLWEYVRRKE+ELP+FVYDHD+KLEFCPV+ S LE+DY
Sbjct: 124 TVGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDHDEKLEFCPVMDSGLESDY 183

Query: 186 LRVFSAVPSLDSPVPTY-SMRCFA 209
           LR+FSA PS+DS V TY SMRCFA
Sbjct: 184 LRLFSASPSVDSAVSTYSSMRCFA 206

[Close]

BLAST of MS016059.1 vs. TAIR 10
Match: AT4G35750.1 (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein )

HSP 1 Score: 238.0 bits (606), Expect = 6.6e-63
Identity = 108/201 (53.73%), Postives = 153/201 (76.12%), Query Frame = 0


Query: 8   SSLSPPDQLHLLRKVEVFNLHGRDKAGRNVLLIVGKYFPARFVSSEAVSFYLKDKIFPAL 67
           S +S  +Q  L+ K+E+F +HGRDK GR +L I+GK+FPARF+S + +  YL++KIFP L
Sbjct: 3   SQISEIEQEQLIEKLEIFKIHGRDKRGRKILRIIGKFFPARFLSLDVLKKYLEEKIFPRL 62

Query: 68  KEGPFTVVYVHTDVHWTENFPGVSYLKAICDAIPITVKNSIEAVYFVHPGLQSRLFFATV 127
              PF V+YVHT V  +ENFPG+S L+AI DAIP+ V+++++ VYF+HPGLQSRLF AT 
Sbjct: 63  GRKPFAVLYVHTGVQRSENFPGISALRAIYDAIPVNVRDNLQEVYFLHPGLQSRLFLATC 122

Query: 128 GRFMLGAGLYNKLKYVKRVEFLWEYVRRKEMELPKFVYDHDQKLEFCPVVYSSLENDYLR 187
           GRF+   GLY KL+Y+ RV++LWE+VRR E+E+P+FVYDHD  LE+ P++    E+D+ R
Sbjct: 123 GRFLFSGGLYGKLRYISRVDYLWEHVRRNEIEMPEFVYDHDDDLEYRPMMDYGQESDHAR 182

Query: 188 VFSAVPSLDSPVPTYSMRCFA 209
           VF+   ++DS V ++SMRC +
Sbjct: 183 VFAGA-AVDSSVSSFSMRCIS 202

[Close]

BLAST of MS016059.1 vs. TAIR 10
Match: AT3G10210.1 (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein )

HSP 1 Score: 157.9 bits (398), Expect = 8.7e-39
Identity = 72/163 (44.17%), Postives = 109/163 (66.87%), Query Frame = 0


Query: 22  VEVFNLHGRDKAGRNVLLIVGKYFPARFVSSEAVSFYLKDKIFPALKEGPFTVVYVHTDV 81
           ++ F L G D++G  +  IVGKYFPAR VS+E +  Y+  KI     EGP  +VY+H+ V
Sbjct: 52  LQFFTLQGLDRSGNRIFRIVGKYFPARVVSAERLKKYISQKISNQCPEGPLCLVYMHSTV 111

Query: 82  HWTENFPGVSYLKAICDAIPITVKNSIEAVYFVHPGLQSRLFFATVGRFMLGAGLYNKLK 141
              +N PG++ L+ I + +P  +K+ ++ VYF+HPGL+SRL  AT+GR +L  GLY K+K
Sbjct: 112 QKDDNSPGITILRWIYEDLPSDIKDRLQLVYFIHPGLRSRLVIATLGRLLLSGGLYWKIK 171

Query: 142 YVKRVEFLWEYVRRKEMELPKFVYDHDQKLEFCPVVYSSLEND 185
           YV R+++LWE +++ E+E+P FV +HD  LE  P+    +E D
Sbjct: 172 YVSRLQYLWEDIKKGEVEIPDFVKNHDNVLEHRPLTDYGIEPD 214

[Close]

BLAST of MS016059.1 vs. TAIR 10
Match: AT1G69340.1 (appr-1-p processing enzyme family protein )

HSP 1 Score: 63.5 bits (153), Expect = 2.2e-10
Identity = 35/140 (25.00%), Postives = 76/140 (54.29%), Query Frame = 0


Query: 29  GRDKAGRNVLLIVGKYFPARFVSSEAVSFYLKDKIFPALKEGPFTVVYVHTDVHWTENFP 88
           G D  G  V+++VG +F  R +  E    Y+  +  P +++ P+++VY H+     +  P
Sbjct: 404 GVDTEGHPVMVVVGAHFLLRCLDLERFVLYVIKEFEPVIQK-PYSIVYFHSAAS-LQVQP 463

Query: 89  GVSYLKAICDAIPITVKNSIEAVYFVHPGLQSRLFFATVGRFMLGAGLYNKLKYVKRVEF 148
            + ++K +   +    + +++A+Y +HP    +    T+ +F +   ++ K+ Y  R+  
Sbjct: 464 DLGWMKRLEQILGRKHQRNLQAIYVLHPTFHLKATILTM-QFFVDNVVWKKVVYADRLLQ 523

Query: 149 LWEYVRRKEMELPKFVYDHD 169
           L++YV R+++ +P FV+ HD
Sbjct: 524 LFKYVPREQLTIPDFVFQHD 540

The following BLAST results are available for this feature:

BLAST of MS016059.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144248.1	1.3e-113	99.04	uncharacterized protein LOC111013979 [Momordica charantia]	[more]
XP_031737047.1	4.6e-90	80.77	ganglioside-induced differentiation-associated-protein 2-like [Cucumis sativus] ...	[more]
XP_016899965.1	1.3e-89	81.73	PREDICTED: ganglioside-induced differentiation-associated protein 2-like [Cucumi...	[more]
KAA0064859.1	2.3e-89	82.09	ganglioside-induced differentiation-associated protein 2-like [Cucumis melo var....	[more]
XP_038884815.1	4.3e-88	80.79	ganglioside-induced differentiation-associated protein 2-like [Benincasa hispida...	[more]

BLAST of MS016059.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7JUR6	2.3e-12	28.57	Protein GDAP2 homolog OS=Drosophila melanogaster OX=7227 GN=Gdap2 PE=2 SV=1	[more]
Q292F9	2.3e-12	28.57	Protein GDAP2 homolog OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=GA15...	[more]

BLAST of MS016059.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CST5	6.4e-114	99.04	uncharacterized protein LOC111013979 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A0A0LML6	2.2e-90	80.77	CRAL-TRIO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G348170 P...	[more]
A0A1S4DW79	6.4e-90	81.73	ganglioside-induced differentiation-associated protein 2-like OS=Cucumis melo OX...	[more]
A0A5A7VHB1	1.1e-89	82.09	Ganglioside-induced differentiation-associated protein 2-like OS=Cucumis melo va...	[more]
A0A6J1KC43	8.2e-85	76.47	protein GDAP2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111491951 PE=4 SV=1	[more]

BLAST of MS016059.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35750.1	6.6e-63	53.73	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein...	[more]
AT3G10210.1	8.7e-39	44.17	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein...	[more]
AT1G69340.1	2.2e-10	25.00	appr-1-p processing enzyme family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036865	CRAL-TRIO lipid binding domain superfamily	GENE3D	3.40.525.10		coord: 2..171 e-value: 4.8E-22 score: 80.2
IPR001251	CRAL-TRIO lipid binding domain	PFAM	PF13716	CRAL_TRIO_2	coord: 34..169 e-value: 1.1E-26 score: 93.7
None	No IPR available	PANTHER	PTHR11106:SF101	PROTEIN, PUTATIVE-RELATED	coord: 5..208
None	No IPR available	PANTHER	PTHR11106	GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED	coord: 5..208

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS016059	MS016059	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS016059.1-cds	MS016059.1-cds-scaffold9_2:33092..33230	CDS
MS016059.1-cds	MS016059.1-cds-scaffold9_2:33350..33614	CDS
MS016059.1-cds	MS016059.1-cds-scaffold9_2:33724..33943	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS016059.1	MS016059.1-protein	polypeptide