MS015171.1 (mRNA) Bitter gourd (TR) v1

Overview
NameMS015171.1
TypemRNA
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRING/FYVE/PHD zinc finger superfamily protein
Locationscaffold2: 1634553 .. 1636668 (-)
Sequence length891
RNA-Seq ExpressionMS015171.1
SyntenyMS015171.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCGATCATCTCGTTTTGTATGTGGACCGGCTGATTCGGCCGGTACCCGTTGATCCGGTGCCCGACCCGAATGAAATTGTTCCTTTCTTAACGCCCGGAGAGGATTTGGACGGCGACTCCGTGGCCTCGTCTTGTTCGACGTCCACTTCCAATGTTGATGGTGTGAGGAGAGAGGAGAATGAGGCTTTGGATGGAGAGAATGATTCACTGATTCAGGTAGCAGAATGTCGTATTTGCCAGGATGAGGATACGATTCAGAAGCTGGAAACACCATGTGCCTGTAGTGGCAGTCTTAAGGTATAAATGATTGGTCCTCTTCTCAATGATGAAGCATTGTGAAACAAACAACTTTATAGGACCTCTGTTTCTTTATATATTTGTGCCACTGTACTAAAAGCTTGAACGAGTAATAAGTATATTATCTCAGAAGCTGGAAACACCATGTGCCTGTAGTGCATTATGATTTCGATAAGATGTTAACAGCAATAATTATTTTCTCAGTATGCTCATCGGAAGTGTATACAGCAATGGTGCAATGAGAAAGGGGATATAACTTGTGAAATCTGCCATCAGGTATGTGCACATTCTTTATCTTAATTGGTTATGTTAAATCCTCAGAATCTTCTGTGTACTCGTGGTCAATGTTATGCAAACATGTATTAACTCGATTCAATACTTTGCTGAGGAGCAAGGACATAATTCAATGATAGCATCATGGCTTGCATTAGCTGAAAGAAAAGCCTTCTTCCGTAATGATATTTCCGTTGAAAAATGAAGTCAATGAATGATATAGTTTGGCAGTTAAAAGATTATAAAACTAAAACAATGTGTGTAAACGCATATATATAGAAAAATTCAGCTACCTTGAATGTTATGGTTTTTAGAGGTTTCAGCTTATCTGATGTTATTCTCTTGCATACGATGTACAGCCTTACCAACCTGATTATACAGCTCCACCACCTCCCCCTCGCATTGAAGAAACTTCTATTGATATTGGGTACCTTACATGCTTCAAGTTTTCATATTTTAGGAAGTTCCAGGAAGTTTCAGGATTATCTTCTGAAATATTTTTGTTTACTTGAAAAATTATGGAAAGTTCTTTGGTTTTGTGCATTTGAGTGATTAAGCTGAACATGTTGTATTCTTTCTTTGCATTCTTGTTTCTGCAGGGGAGGATGGACCATCACTGGCACCCCTTTGAATTTACAGGATCCTCGCCTTTTGGCTATTGCAGAGGCTGAACGTAATTTATTGGAAGCCGAGTATGACGAATATGCAGCTTCAGATGCTAGTGGAGCTGCATTTTGTCGAGCAGCTGCTCTTATTGTAAGTTTATTGTTCGATATCACACATAAGAGACCCAATATAATAATCAAGAATCTTACTTTTATCATGCACTTTTAAATTGATGTCAGTATAGATTATCCTTCAATCTTACTAGTTGGATATATCGGATACACCGTTTTGCTAATACCTCACTCTTGAAGATAAATTTGTCATCGTGGTTTCACATTCTCATAAAAAGTGTCATAAAGGAAGAACCTTTTATTGAAACTTGCCGTTCAATTGGGATAAATAACATCATTTTCTTTATTTCAATTTTGCAGCTCATGATCCTACTTTTCTTACGTCATGCACTGGAAGTCACAGATCCTGATGGTGATGATTATGTGTCTGCTTTCTTCTCTGTAAGTCGAGTTGATTGTTTTAATCTGGAATGAACAATAATCTGCTGCCAGTTTCCTTTTCAAAGATCTTTGGCTTCAACTTGTGGACATTGTTTTTAACCATATTGTTCAGATTTTCTTGCTCCGAGCGGCCGGTTTTCTCTTGCCTTGCTACATTATGGCTTGTGCAGTCAACATCTTGCAACGTCGACAACGAAGACAGGTGGATTCACCTCCCACATTATCATTCATTAACGAATAATTCAAGTATCATTTTTTTGTATTGAATGTTCGTTTATCCTCTATGTTTTGTGTAATTTAAGGAACAGGAGGCTGCAGCCTTAGGTGCAGCACAAGTTGCTTTTGTGCTACAATCAGGACGACACAGAGGTCTGCAATTTGCCATAGCATCAGGACCTCAAGTGGCTCCGCACCAGGACATTGTT

mRNA sequence

ATGGGCGATCATCTCGTTTTGTATGTGGACCGGCTGATTCGGCCGGTACCCGTTGATCCGGTGCCCGACCCGAATGAAATTGTTCCTTTCTTAACGCCCGGAGAGGATTTGGACGGCGACTCCGTGGCCTCGTCTTGTTCGACGTCCACTTCCAATGTTGATGGTGTGAGGAGAGAGGAGAATGAGGCTTTGGATGGAGAGAATGATTCACTGATTCAGGTAGCAGAATGTCGTATTTGCCAGGATGAGGATACGATTCAGAAGCTGGAAACACCATGTGCCTGTAGTGGCAGTCTTAAGTATGCTCATCGGAAGTGTATACAGCAATGGTGCAATGAGAAAGGGGATATAACTTGTGAAATCTGCCATCAGCCTTACCAACCTGATTATACAGCTCCACCACCTCCCCCTCGCATTGAAGAAACTTCTATTGATATTGGGGGAGGATGGACCATCACTGGCACCCCTTTGAATTTACAGGATCCTCGCCTTTTGGCTATTGCAGAGGCTGAACGTAATTTATTGGAAGCCGAGTATGACGAATATGCAGCTTCAGATGCTAGTGGAGCTGCATTTTGTCGAGCAGCTGCTCTTATTCTCATGATCCTACTTTTCTTACGTCATGCACTGGAAGTCACAGATCCTGATGGTGATGATTATGTGTCTGCTTTCTTCTCTATTTTCTTGCTCCGAGCGGCCGGTTTTCTCTTGCCTTGCTACATTATGGCTTGTGCAGTCAACATCTTGCAACGTCGACAACGAAGACAGGAACAGGAGGCTGCAGCCTTAGGTGCAGCACAAGTTGCTTTTGTGCTACAATCAGGACGACACAGAGGTCTGCAATTTGCCATAGCATCAGGACCTCAAGTGGCTCCGCACCAGGACATTGTT

Coding sequence (CDS)

ATGGGCGATCATCTCGTTTTGTATGTGGACCGGCTGATTCGGCCGGTACCCGTTGATCCGGTGCCCGACCCGAATGAAATTGTTCCTTTCTTAACGCCCGGAGAGGATTTGGACGGCGACTCCGTGGCCTCGTCTTGTTCGACGTCCACTTCCAATGTTGATGGTGTGAGGAGAGAGGAGAATGAGGCTTTGGATGGAGAGAATGATTCACTGATTCAGGTAGCAGAATGTCGTATTTGCCAGGATGAGGATACGATTCAGAAGCTGGAAACACCATGTGCCTGTAGTGGCAGTCTTAAGTATGCTCATCGGAAGTGTATACAGCAATGGTGCAATGAGAAAGGGGATATAACTTGTGAAATCTGCCATCAGCCTTACCAACCTGATTATACAGCTCCACCACCTCCCCCTCGCATTGAAGAAACTTCTATTGATATTGGGGGAGGATGGACCATCACTGGCACCCCTTTGAATTTACAGGATCCTCGCCTTTTGGCTATTGCAGAGGCTGAACGTAATTTATTGGAAGCCGAGTATGACGAATATGCAGCTTCAGATGCTAGTGGAGCTGCATTTTGTCGAGCAGCTGCTCTTATTCTCATGATCCTACTTTTCTTACGTCATGCACTGGAAGTCACAGATCCTGATGGTGATGATTATGTGTCTGCTTTCTTCTCTATTTTCTTGCTCCGAGCGGCCGGTTTTCTCTTGCCTTGCTACATTATGGCTTGTGCAGTCAACATCTTGCAACGTCGACAACGAAGACAGGAACAGGAGGCTGCAGCCTTAGGTGCAGCACAAGTTGCTTTTGTGCTACAATCAGGACGACACAGAGGTCTGCAATTTGCCATAGCATCAGGACCTCAAGTGGCTCCGCACCAGGACATTGTT

Protein sequence

MGDHLVLYVDRLIRPVPVDPVPDPNEIVPFLTPGEDLDGDSVASSCSTSTSNVDGVRREENEALDGENDSLIQVAECRICQDEDTIQKLETPCACSGSLKYAHRKCIQQWCNEKGDITCEICHQPYQPDYTAPPPPPRIEETSIDIGGGWTITGTPLNLQDPRLLAIAEAERNLLEAEYDEYAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYVSAFFSIFLLRAAGFLLPCYIMACAVNILQRRQRRQEQEAAALGAAQVAFVLQSGRHRGLQFAIASGPQVAPHQDIV
Homology
BLAST of MS015171.1 vs. NCBI nr
Match: XP_022151197.1 (uncharacterized protein LOC111019176 [Momordica charantia])

HSP 1 Score: 598.2 bits (1541), Expect = 3.9e-167
Identity = 296/297 (99.66%), Postives = 296/297 (99.66%), Query Frame = 0

Query: 1   MGDHLVLYVDRLIRPVPVDPVPDPNEIVPFLTPGEDLDGDSVASSCSTSTSNVDGVRREE 60
           MGDHLVLYVDRLIRPVPVDPVPDPNEIVPFLTPGEDLDGDSVASSCSTSTSNVDGVRREE
Sbjct: 1   MGDHLVLYVDRLIRPVPVDPVPDPNEIVPFLTPGEDLDGDSVASSCSTSTSNVDGVRREE 60

Query: 61  NEALDGENDSLIQVAECRICQDEDTIQKLETPCACSGSLKYAHRKCIQQWCNEKGDITCE 120
           NEALDGENDSLIQVAECRICQDEDTIQKLETPCACSGSLKYAHRKCIQQWCNEKGDITCE
Sbjct: 61  NEALDGENDSLIQVAECRICQDEDTIQKLETPCACSGSLKYAHRKCIQQWCNEKGDITCE 120

Query: 121 ICHQPYQPDYTAPPPPPRIEETSIDIGGGWTITGTPLNLQDPRLLAIAEAERNLLEAEYD 180
           ICHQPYQPDYTAPPPPPRIEETSIDIGGGWTITGTPLNLQDPRLLAIAEAERNLLEAEYD
Sbjct: 121 ICHQPYQPDYTAPPPPPRIEETSIDIGGGWTITGTPLNLQDPRLLAIAEAERNLLEAEYD 180

Query: 181 EYAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYVSAFFSIFLLRAAGFLLPCY 240
           EYAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYVSAFFSIFLLRAAGFLLPCY
Sbjct: 181 EYAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYVSAFFSIFLLRAAGFLLPCY 240

Query: 241 IMACAVNILQRRQRRQEQEAAALGAAQVAFVLQSGRHRGLQFAIASGPQVAPHQDIV 298
           IMACA NILQRRQRRQEQEAAALGAAQVAFVLQSGRHRGLQFAIASGPQVAPHQDIV
Sbjct: 241 IMACAXNILQRRQRRQEQEAAALGAAQVAFVLQSGRHRGLQFAIASGPQVAPHQDIV 297

BLAST of MS015171.1 vs. NCBI nr
Match: XP_008446351.1 (PREDICTED: uncharacterized protein LOC103489118 [Cucumis melo] >KAA0034417.1 zinc finger family protein [Cucumis melo var. makuwa] >TYK17716.1 zinc finger family protein [Cucumis melo var. makuwa])

HSP 1 Score: 515.4 bits (1326), Expect = 3.3e-142
Identity = 258/297 (86.87%), Postives = 269/297 (90.57%), Query Frame = 0

Query: 1   MGDHLVLYVDRLIRPVPVDPVPDPNEIVPFLTPGEDLDGDSVASSCSTSTSNVDGVRREE 60
           M DHLVLYVDRL+RP PVD VP+P E VP L  G DL+ DSV  S STS SNV+  R EE
Sbjct: 1   MSDHLVLYVDRLVRPPPVDSVPNPAEAVPLLPVGGDLESDSVGLSSSTSASNVE-ERGEE 60

Query: 61  NEALDGENDSLIQVAECRICQDEDTIQKLETPCACSGSLKYAHRKCIQQWCNEKGDITCE 120
           NE LDGE+DSLIQ AECRICQDED I+KLETPCACSGSLKYAHRKCIQ WCNEKGDI CE
Sbjct: 61  NEGLDGEDDSLIQTAECRICQDEDVIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIICE 120

Query: 121 ICHQPYQPDYTAPPPPPRIEETSIDIGGGWTITGTPLNLQDPRLLAIAEAERNLLEAEYD 180
           ICHQPYQP YTAPPPPPRIEETSIDIGGGWTITGTPLNL DPRLLAIAEAE NLLEAEYD
Sbjct: 121 ICHQPYQPGYTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPRLLAIAEAEHNLLEAEYD 180

Query: 181 EYAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYVSAFFSIFLLRAAGFLLPCY 240
           +YAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDY+SAFFSIFLLRAAGFLLPCY
Sbjct: 181 DYAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYLSAFFSIFLLRAAGFLLPCY 240

Query: 241 IMACAVNILQRRQRRQEQEAAALGAAQVAFVLQSGRHRGLQFAIASGPQVAPHQDIV 298
           IMACAVNILQRRQRRQE+EAAALGAAQVAFVLQSGRHRGLQFAIA GPQ+ PHQ+ V
Sbjct: 241 IMACAVNILQRRQRRQEREAAALGAAQVAFVLQSGRHRGLQFAIAPGPQMTPHQETV 296

BLAST of MS015171.1 vs. NCBI nr
Match: XP_023552876.1 (uncharacterized protein LOC111810398 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 514.6 bits (1324), Expect = 5.6e-142
Identity = 259/297 (87.21%), Postives = 271/297 (91.25%), Query Frame = 0

Query: 1   MGDHLVLYVDRLIRPVPVDPVPDPNEIVPFLTPGEDLDGDSVASSCSTSTSNVDGVRREE 60
           M DHLVLYVDRLIRPVPVD VP+P EIVPFL  G DL+GDS+   CSTSTSNVD  +R+E
Sbjct: 1   MSDHLVLYVDRLIRPVPVDSVPNPTEIVPFLPVGGDLEGDSLGFPCSTSTSNVD-EKRKE 60

Query: 61  NEALDGENDSLIQVAECRICQDEDTIQKLETPCACSGSLKYAHRKCIQQWCNEKGDITCE 120
           +E LDGE+DSLIQ AECRICQD+D I+KLETPCACSGSLKYAHRKCIQ WCNEKGDI CE
Sbjct: 61  SEDLDGEDDSLIQTAECRICQDDDIIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIICE 120

Query: 121 ICHQPYQPDYTAPPPPPRIEETSIDIGGGWTITGTPLNLQDPRLLAIAEAERNLLEAEYD 180
           ICHQPYQP YTAPPPPPRIEETSIDIGGGWTITGTPLNL DPRLLAIAEAE NLLEAEYD
Sbjct: 121 ICHQPYQPGYTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPRLLAIAEAEHNLLEAEYD 180

Query: 181 EYAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYVSAFFSIFLLRAAGFLLPCY 240
           EYAASDASGAAFCRAAA ILMILLFLRHALEVTDPDGDDY+SAFFSIFLLR AGFLLPCY
Sbjct: 181 EYAASDASGAAFCRAAAFILMILLFLRHALEVTDPDGDDYLSAFFSIFLLRVAGFLLPCY 240

Query: 241 IMACAVNILQRRQRRQEQEAAALGAAQVAFVLQSGRHRGLQFAIASGPQVAPHQDIV 298
           IMACAVNILQRRQRRQE+EAAALGAAQVAFVLQ GRHRGLQFAIASGPQ+   QD V
Sbjct: 241 IMACAVNILQRRQRRQEREAAALGAAQVAFVLQ-GRHRGLQFAIASGPQMTSRQDTV 295

BLAST of MS015171.1 vs. NCBI nr
Match: XP_038891937.1 (uncharacterized protein LOC120081275 [Benincasa hispida])

HSP 1 Score: 513.8 bits (1322), Expect = 9.6e-142
Identity = 259/297 (87.21%), Postives = 266/297 (89.56%), Query Frame = 0

Query: 1   MGDHLVLYVDRLIRPVPVDPVPDPNEIVPFLTPGEDLDGDSVASSCSTSTSNVDGVRREE 60
           M DHLVLYVDR+IRP PVD VP+P E+VP L  G DL  DSV  S STSTSN D  R  E
Sbjct: 1   MSDHLVLYVDRIIRPPPVDSVPNPTEVVPLLRVGGDLASDSVGLSSSTSTSNFD-ERAHE 60

Query: 61  NEALDGENDSLIQVAECRICQDEDTIQKLETPCACSGSLKYAHRKCIQQWCNEKGDITCE 120
           NE LDGE DSLIQ AECRICQDED I+KLETPCACSGSLKYAHRKCIQ WCNEKGDI CE
Sbjct: 61  NEGLDGEADSLIQTAECRICQDEDVIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIICE 120

Query: 121 ICHQPYQPDYTAPPPPPRIEETSIDIGGGWTITGTPLNLQDPRLLAIAEAERNLLEAEYD 180
           ICHQPYQP YTAPPPPPRIEETSIDIGGGWTITGTPLNL DPRLLAIAEAE NLLEAEYD
Sbjct: 121 ICHQPYQPGYTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPRLLAIAEAEHNLLEAEYD 180

Query: 181 EYAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYVSAFFSIFLLRAAGFLLPCY 240
           EYAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDY+SAFFSIFLLRAAGFLLPCY
Sbjct: 181 EYAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYLSAFFSIFLLRAAGFLLPCY 240

Query: 241 IMACAVNILQRRQRRQEQEAAALGAAQVAFVLQSGRHRGLQFAIASGPQVAPHQDIV 298
           IMACAVNILQRRQRRQE+EAAALGAAQVAFVLQSGRHRGLQFAIASGP +  HQD V
Sbjct: 241 IMACAVNILQRRQRRQEREAAALGAAQVAFVLQSGRHRGLQFAIASGPPMTSHQDTV 296

BLAST of MS015171.1 vs. NCBI nr
Match: XP_022957378.1 (uncharacterized protein LOC111458795 [Cucurbita moschata] >XP_022957379.1 uncharacterized protein LOC111458795 [Cucurbita moschata] >XP_022957380.1 uncharacterized protein LOC111458795 [Cucurbita moschata] >XP_022957381.1 uncharacterized protein LOC111458795 [Cucurbita moschata] >XP_022957382.1 uncharacterized protein LOC111458795 [Cucurbita moschata])

HSP 1 Score: 511.9 bits (1317), Expect = 3.7e-141
Identity = 258/295 (87.46%), Postives = 269/295 (91.19%), Query Frame = 0

Query: 1   MGDHLVLYVDRLIRPVPVDPVPDPNEIVPFLTPGEDLDGDSVASSCSTSTSNVDGVRREE 60
           M DHLVLYVDRLIRPVPVD VP+P EIVPFL  G DL+GDS+   CSTSTSNVD  +R E
Sbjct: 1   MSDHLVLYVDRLIRPVPVDSVPNPTEIVPFLPVGGDLEGDSLGFPCSTSTSNVD-EKRIE 60

Query: 61  NEALDGENDSLIQVAECRICQDEDTIQKLETPCACSGSLKYAHRKCIQQWCNEKGDITCE 120
           +E LDGE+DSLIQ AECRICQD+D I+KLETPCACSGSLKYAHRKCIQ WCNEKGDI CE
Sbjct: 61  SEDLDGEDDSLIQTAECRICQDDDIIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIICE 120

Query: 121 ICHQPYQPDYTAPPPPPRIEETSIDIGGGWTITGTPLNLQDPRLLAIAEAERNLLEAEYD 180
           ICHQPYQP YTAPPPPPRIEETSIDIGGGWTITGTPLNL DPRLLAIAEAE NLLEAEYD
Sbjct: 121 ICHQPYQPGYTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPRLLAIAEAEHNLLEAEYD 180

Query: 181 EYAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYVSAFFSIFLLRAAGFLLPCY 240
           EYAASDASGAAFCRAAA ILMILLFLRHALEVTDPDGDDY+SAFFSIFLLR AGFLLPCY
Sbjct: 181 EYAASDASGAAFCRAAAFILMILLFLRHALEVTDPDGDDYLSAFFSIFLLRVAGFLLPCY 240

Query: 241 IMACAVNILQRRQRRQEQEAAALGAAQVAFVLQSGRHRGLQFAIASGPQVAPHQD 296
           IMACAVNILQRRQRRQE+EAAALGAAQVAFVLQ GRHRGLQFAIASGPQ+   QD
Sbjct: 241 IMACAVNILQRRQRRQEREAAALGAAQVAFVLQ-GRHRGLQFAIASGPQMTSRQD 293

BLAST of MS015171.1 vs. ExPASy Swiss-Prot
Match: Q0P496 (E3 ubiquitin-protein ligase MARCHF4 OS=Danio rerio OX=7955 GN=marchf4 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.0e-08
Identity = 27/82 (32.93%), Postives = 47/82 (57.32%), Query Frame = 0

Query: 46  CSTSTSNVDGVRREENEALDGENDSLIQVAECRICQDEDTIQKLETPCACSGSLKYAHRK 105
           C +S+ +    + +E  +L+   DS ++   CRIC       +L +PC CSGS++  H  
Sbjct: 112 CCSSSEDCSKEKLDERLSLNSCTDSGVRTPLCRICFQGPEQGELLSPCRCSGSVRCTHEP 171

Query: 106 CIQQWCNEKGDITCEICHQPYQ 128
           C+ +W +E+G  +CE+C+  YQ
Sbjct: 172 CLIKWISERGSWSCELCYYKYQ 193

BLAST of MS015171.1 vs. ExPASy Swiss-Prot
Match: F4JKK0 (Probable E3 ubiquitin ligase SUD1 OS=Arabidopsis thaliana OX=3702 GN=SUD1 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.4e-07
Identity = 23/51 (45.10%), Postives = 31/51 (60.78%), Query Frame = 0

Query: 77  CRICQDE-DTIQKLETPCACSGSLKYAHRKCIQQWCNEKGDITCEICHQPY 127
           CRIC++  D    L  PCACSGS+K+ H+ C+ QW N      CE+C  P+
Sbjct: 68  CRICRNPGDADNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHPF 118

BLAST of MS015171.1 vs. ExPASy Swiss-Prot
Match: Q80TE3 (E3 ubiquitin-protein ligase MARCHF4 OS=Mus musculus OX=10090 GN=Marchf4 PE=2 SV=3)

HSP 1 Score: 58.2 bits (139), Expect = 1.9e-07
Identity = 35/111 (31.53%), Postives = 59/111 (53.15%), Query Frame = 0

Query: 20  PVPDPNEIVPFLTPGEDLDGDSVASSCS-TSTSNVDGVRREENE---ALDGENDSLIQVA 79
           P+P P  + P  +  +D DG +     S  S+++ D   +E+ E   +L    DS ++  
Sbjct: 103 PLPPPPPLPP--SGDDDWDGPATGPPASLLSSASSDEFCKEKTEDCYSLGSSLDSGMRTP 162

Query: 80  ECRICQDEDTIQKLETPCACSGSLKYAHRKCIQQWCNEKGDITCEICHQPY 127
            CRIC       +L +PC C GS+K  H+ C+ +W +E+G  +CE+C+  Y
Sbjct: 163 LCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCYYKY 211

BLAST of MS015171.1 vs. ExPASy Swiss-Prot
Match: Q86YJ5 (E3 ubiquitin-protein ligase MARCHF9 OS=Homo sapiens OX=9606 GN=MARCHF9 PE=1 SV=2)

HSP 1 Score: 58.2 bits (139), Expect = 1.9e-07
Identity = 23/65 (35.38%), Postives = 39/65 (60.00%), Query Frame = 0

Query: 63  ALDGENDSLIQVAECRICQDEDTIQKLETPCACSGSLKYAHRKCIQQWCNEKGDITCEIC 122
           +L    DS ++  +CRIC       +L +PC C GS++  H+ C+ +W +E+G  +CE+C
Sbjct: 96  SLSSSLDSGLRTPQCRICFQGPEQGELLSPCRCDGSVRCTHQPCLIRWISERGSWSCELC 155

Query: 123 HQPYQ 128
           +  YQ
Sbjct: 156 YFKYQ 160

BLAST of MS015171.1 vs. ExPASy Swiss-Prot
Match: Q3TZ87 (E3 ubiquitin-protein ligase MARCHF9 OS=Mus musculus OX=10090 GN=Marchf9 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.9e-07
Identity = 23/65 (35.38%), Postives = 39/65 (60.00%), Query Frame = 0

Query: 63  ALDGENDSLIQVAECRICQDEDTIQKLETPCACSGSLKYAHRKCIQQWCNEKGDITCEIC 122
           +L    DS ++  +CRIC       +L +PC C GS++  H+ C+ +W +E+G  +CE+C
Sbjct: 96  SLSSSLDSGLRTPQCRICFQGPEQGELLSPCRCDGSVRCTHQPCLIRWISERGSWSCELC 155

Query: 123 HQPYQ 128
           +  YQ
Sbjct: 156 YFKYQ 160

BLAST of MS015171.1 vs. ExPASy TrEMBL
Match: A0A6J1DCU2 (uncharacterized protein LOC111019176 OS=Momordica charantia OX=3673 GN=LOC111019176 PE=4 SV=1)

HSP 1 Score: 598.2 bits (1541), Expect = 1.9e-167
Identity = 296/297 (99.66%), Postives = 296/297 (99.66%), Query Frame = 0

Query: 1   MGDHLVLYVDRLIRPVPVDPVPDPNEIVPFLTPGEDLDGDSVASSCSTSTSNVDGVRREE 60
           MGDHLVLYVDRLIRPVPVDPVPDPNEIVPFLTPGEDLDGDSVASSCSTSTSNVDGVRREE
Sbjct: 1   MGDHLVLYVDRLIRPVPVDPVPDPNEIVPFLTPGEDLDGDSVASSCSTSTSNVDGVRREE 60

Query: 61  NEALDGENDSLIQVAECRICQDEDTIQKLETPCACSGSLKYAHRKCIQQWCNEKGDITCE 120
           NEALDGENDSLIQVAECRICQDEDTIQKLETPCACSGSLKYAHRKCIQQWCNEKGDITCE
Sbjct: 61  NEALDGENDSLIQVAECRICQDEDTIQKLETPCACSGSLKYAHRKCIQQWCNEKGDITCE 120

Query: 121 ICHQPYQPDYTAPPPPPRIEETSIDIGGGWTITGTPLNLQDPRLLAIAEAERNLLEAEYD 180
           ICHQPYQPDYTAPPPPPRIEETSIDIGGGWTITGTPLNLQDPRLLAIAEAERNLLEAEYD
Sbjct: 121 ICHQPYQPDYTAPPPPPRIEETSIDIGGGWTITGTPLNLQDPRLLAIAEAERNLLEAEYD 180

Query: 181 EYAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYVSAFFSIFLLRAAGFLLPCY 240
           EYAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYVSAFFSIFLLRAAGFLLPCY
Sbjct: 181 EYAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYVSAFFSIFLLRAAGFLLPCY 240

Query: 241 IMACAVNILQRRQRRQEQEAAALGAAQVAFVLQSGRHRGLQFAIASGPQVAPHQDIV 298
           IMACA NILQRRQRRQEQEAAALGAAQVAFVLQSGRHRGLQFAIASGPQVAPHQDIV
Sbjct: 241 IMACAXNILQRRQRRQEQEAAALGAAQVAFVLQSGRHRGLQFAIASGPQVAPHQDIV 297

BLAST of MS015171.1 vs. ExPASy TrEMBL
Match: A0A5A7SYR0 (Zinc finger family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00440 PE=4 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 1.6e-142
Identity = 258/297 (86.87%), Postives = 269/297 (90.57%), Query Frame = 0

Query: 1   MGDHLVLYVDRLIRPVPVDPVPDPNEIVPFLTPGEDLDGDSVASSCSTSTSNVDGVRREE 60
           M DHLVLYVDRL+RP PVD VP+P E VP L  G DL+ DSV  S STS SNV+  R EE
Sbjct: 1   MSDHLVLYVDRLVRPPPVDSVPNPAEAVPLLPVGGDLESDSVGLSSSTSASNVE-ERGEE 60

Query: 61  NEALDGENDSLIQVAECRICQDEDTIQKLETPCACSGSLKYAHRKCIQQWCNEKGDITCE 120
           NE LDGE+DSLIQ AECRICQDED I+KLETPCACSGSLKYAHRKCIQ WCNEKGDI CE
Sbjct: 61  NEGLDGEDDSLIQTAECRICQDEDVIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIICE 120

Query: 121 ICHQPYQPDYTAPPPPPRIEETSIDIGGGWTITGTPLNLQDPRLLAIAEAERNLLEAEYD 180
           ICHQPYQP YTAPPPPPRIEETSIDIGGGWTITGTPLNL DPRLLAIAEAE NLLEAEYD
Sbjct: 121 ICHQPYQPGYTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPRLLAIAEAEHNLLEAEYD 180

Query: 181 EYAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYVSAFFSIFLLRAAGFLLPCY 240
           +YAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDY+SAFFSIFLLRAAGFLLPCY
Sbjct: 181 DYAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYLSAFFSIFLLRAAGFLLPCY 240

Query: 241 IMACAVNILQRRQRRQEQEAAALGAAQVAFVLQSGRHRGLQFAIASGPQVAPHQDIV 298
           IMACAVNILQRRQRRQE+EAAALGAAQVAFVLQSGRHRGLQFAIA GPQ+ PHQ+ V
Sbjct: 241 IMACAVNILQRRQRRQEREAAALGAAQVAFVLQSGRHRGLQFAIAPGPQMTPHQETV 296

BLAST of MS015171.1 vs. ExPASy TrEMBL
Match: A0A1S3BFI9 (uncharacterized protein LOC103489118 OS=Cucumis melo OX=3656 GN=LOC103489118 PE=4 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 1.6e-142
Identity = 258/297 (86.87%), Postives = 269/297 (90.57%), Query Frame = 0

Query: 1   MGDHLVLYVDRLIRPVPVDPVPDPNEIVPFLTPGEDLDGDSVASSCSTSTSNVDGVRREE 60
           M DHLVLYVDRL+RP PVD VP+P E VP L  G DL+ DSV  S STS SNV+  R EE
Sbjct: 1   MSDHLVLYVDRLVRPPPVDSVPNPAEAVPLLPVGGDLESDSVGLSSSTSASNVE-ERGEE 60

Query: 61  NEALDGENDSLIQVAECRICQDEDTIQKLETPCACSGSLKYAHRKCIQQWCNEKGDITCE 120
           NE LDGE+DSLIQ AECRICQDED I+KLETPCACSGSLKYAHRKCIQ WCNEKGDI CE
Sbjct: 61  NEGLDGEDDSLIQTAECRICQDEDVIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIICE 120

Query: 121 ICHQPYQPDYTAPPPPPRIEETSIDIGGGWTITGTPLNLQDPRLLAIAEAERNLLEAEYD 180
           ICHQPYQP YTAPPPPPRIEETSIDIGGGWTITGTPLNL DPRLLAIAEAE NLLEAEYD
Sbjct: 121 ICHQPYQPGYTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPRLLAIAEAEHNLLEAEYD 180

Query: 181 EYAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYVSAFFSIFLLRAAGFLLPCY 240
           +YAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDY+SAFFSIFLLRAAGFLLPCY
Sbjct: 181 DYAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYLSAFFSIFLLRAAGFLLPCY 240

Query: 241 IMACAVNILQRRQRRQEQEAAALGAAQVAFVLQSGRHRGLQFAIASGPQVAPHQDIV 298
           IMACAVNILQRRQRRQE+EAAALGAAQVAFVLQSGRHRGLQFAIA GPQ+ PHQ+ V
Sbjct: 241 IMACAVNILQRRQRRQEREAAALGAAQVAFVLQSGRHRGLQFAIAPGPQMTPHQETV 296

BLAST of MS015171.1 vs. ExPASy TrEMBL
Match: A0A6J1GZ22 (uncharacterized protein LOC111458795 OS=Cucurbita moschata OX=3662 GN=LOC111458795 PE=4 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 1.8e-141
Identity = 258/295 (87.46%), Postives = 269/295 (91.19%), Query Frame = 0

Query: 1   MGDHLVLYVDRLIRPVPVDPVPDPNEIVPFLTPGEDLDGDSVASSCSTSTSNVDGVRREE 60
           M DHLVLYVDRLIRPVPVD VP+P EIVPFL  G DL+GDS+   CSTSTSNVD  +R E
Sbjct: 1   MSDHLVLYVDRLIRPVPVDSVPNPTEIVPFLPVGGDLEGDSLGFPCSTSTSNVD-EKRIE 60

Query: 61  NEALDGENDSLIQVAECRICQDEDTIQKLETPCACSGSLKYAHRKCIQQWCNEKGDITCE 120
           +E LDGE+DSLIQ AECRICQD+D I+KLETPCACSGSLKYAHRKCIQ WCNEKGDI CE
Sbjct: 61  SEDLDGEDDSLIQTAECRICQDDDIIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIICE 120

Query: 121 ICHQPYQPDYTAPPPPPRIEETSIDIGGGWTITGTPLNLQDPRLLAIAEAERNLLEAEYD 180
           ICHQPYQP YTAPPPPPRIEETSIDIGGGWTITGTPLNL DPRLLAIAEAE NLLEAEYD
Sbjct: 121 ICHQPYQPGYTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPRLLAIAEAEHNLLEAEYD 180

Query: 181 EYAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYVSAFFSIFLLRAAGFLLPCY 240
           EYAASDASGAAFCRAAA ILMILLFLRHALEVTDPDGDDY+SAFFSIFLLR AGFLLPCY
Sbjct: 181 EYAASDASGAAFCRAAAFILMILLFLRHALEVTDPDGDDYLSAFFSIFLLRVAGFLLPCY 240

Query: 241 IMACAVNILQRRQRRQEQEAAALGAAQVAFVLQSGRHRGLQFAIASGPQVAPHQD 296
           IMACAVNILQRRQRRQE+EAAALGAAQVAFVLQ GRHRGLQFAIASGPQ+   QD
Sbjct: 241 IMACAVNILQRRQRRQEREAAALGAAQVAFVLQ-GRHRGLQFAIASGPQMTSRQD 293

BLAST of MS015171.1 vs. ExPASy TrEMBL
Match: A0A6J1JZ00 (uncharacterized protein LOC111489151 OS=Cucurbita maxima OX=3661 GN=LOC111489151 PE=4 SV=1)

HSP 1 Score: 511.1 bits (1315), Expect = 3.0e-141
Identity = 257/297 (86.53%), Postives = 271/297 (91.25%), Query Frame = 0

Query: 1   MGDHLVLYVDRLIRPVPVDPVPDPNEIVPFLTPGEDLDGDSVASSCSTSTSNVDGVRREE 60
           M DHLVLYVDRLIRPVPV+ VP+P E+VPFL  G DL+GDS+   CSTSTSNVD  +R+E
Sbjct: 1   MSDHLVLYVDRLIRPVPVESVPNPTEVVPFLPIGGDLEGDSLGFPCSTSTSNVD-EKRKE 60

Query: 61  NEALDGENDSLIQVAECRICQDEDTIQKLETPCACSGSLKYAHRKCIQQWCNEKGDITCE 120
           +E LDGE+DSLIQ AECRICQD+D I+KLETPCACSGSLKYAHRKCIQ WCNEKGDI CE
Sbjct: 61  SEDLDGEDDSLIQTAECRICQDDDIIRKLETPCACSGSLKYAHRKCIQLWCNEKGDIICE 120

Query: 121 ICHQPYQPDYTAPPPPPRIEETSIDIGGGWTITGTPLNLQDPRLLAIAEAERNLLEAEYD 180
           ICHQPYQP YTAPPPPPRIEETSIDIGGGWTITGTPLNL DPRLLAIAEAE NLLEAEYD
Sbjct: 121 ICHQPYQPGYTAPPPPPRIEETSIDIGGGWTITGTPLNLHDPRLLAIAEAEHNLLEAEYD 180

Query: 181 EYAASDASGAAFCRAAALILMILLFLRHALEVTDPDGDDYVSAFFSIFLLRAAGFLLPCY 240
           EYAASDASGAAFCRAAA ILMILLFLRHALEVTDPDGDDY+SAFFSIFLLR AGFLLPCY
Sbjct: 181 EYAASDASGAAFCRAAAFILMILLFLRHALEVTDPDGDDYLSAFFSIFLLRVAGFLLPCY 240

Query: 241 IMACAVNILQRRQRRQEQEAAALGAAQVAFVLQSGRHRGLQFAIASGPQVAPHQDIV 298
           IMACAVNILQRRQRRQE+EAAALGAAQVAFVLQ GRHRGLQFAIASGPQ+   QD V
Sbjct: 241 IMACAVNILQRRQRRQEREAAALGAAQVAFVLQ-GRHRGLQFAIASGPQMTSLQDTV 295

BLAST of MS015171.1 vs. TAIR 10
Match: AT3G47550.3 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 301.2 bits (770), Expect = 9.1e-82
Identity = 167/294 (56.80%), Postives = 206/294 (70.07%), Query Frame = 0

Query: 1   MGDHLVLYVDRLIRPVPVDPVPDPNEIVPFLTPGEDLDGDSVASSCSTSTSNVDGVRREE 60
           M DHL L  DRLI    +D   D +      + GE           S+S +  +  R  E
Sbjct: 1   MADHLSLCTDRLITSESLDSEKDSD------SSGESSYRPQGTDLASSSVNETEVPR--E 60

Query: 61  NEALDGENDSLIQVAECRICQDEDTIQKLETPCACSGSLKYAHRKCIQQWCNEKGDITCE 120
             A+  E + L+Q  ECRICQ+ED+ + LE PCAC+GSLKYAHRKC+Q+WCNEKGDITCE
Sbjct: 61  YYAVADEEEPLLQSVECRICQEEDSTKNLEAPCACNGSLKYAHRKCVQRWCNEKGDITCE 120

Query: 121 ICHQPYQPDYTAPPPPPRIEETSIDIGGGWTITGTPLNLQDPRLLAIAEAERNLLEAEYD 180
           ICHQPYQ  YTAPPPPP  +ET I IG  W   G PL+L DPR+LA+A AER+ LEA+YD
Sbjct: 121 ICHQPYQHGYTAPPPPPP-DETIIHIGDDWE-NGVPLDLTDPRILAMAAAERHFLEADYD 180

Query: 181 EYAASDASGAAFCRAAALILMILLFLRHALEV-TDPDGDDYVSAFFSIFLLRAAGFLLPC 240
           EY+ +++SGAAFCR+AALILM LL LR AL + T+PD +D  +AFFS+FLLRAAGFLLPC
Sbjct: 181 EYSENNSSGAAFCRSAALILMALLLLRDALNLTTNPDDEDDPTAFFSLFLLRAAGFLLPC 240

Query: 241 YIMACAVNILQRRQRRQEQEAAALGAAQVAFVLQSG--RHRGLQFAIASGPQVA 292
           YIMA A+ ILQR  RRQ QEAAAL AA+V F++  G  + RGL FA+A  P ++
Sbjct: 241 YIMAWAIGILQR--RRQRQEAAALAAAEVTFMIHGGGPQRRGLHFAVAPQPPIS 282

BLAST of MS015171.1 vs. TAIR 10
Match: AT3G47550.6 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 301.2 bits (770), Expect = 9.1e-82
Identity = 167/294 (56.80%), Postives = 206/294 (70.07%), Query Frame = 0

Query: 1   MGDHLVLYVDRLIRPVPVDPVPDPNEIVPFLTPGEDLDGDSVASSCSTSTSNVDGVRREE 60
           M DHL L  DRLI    +D   D +      + GE           S+S +  +  R  E
Sbjct: 1   MADHLSLCTDRLITSESLDSEKDSD------SSGESSYRPQGTDLASSSVNETEVPR--E 60

Query: 61  NEALDGENDSLIQVAECRICQDEDTIQKLETPCACSGSLKYAHRKCIQQWCNEKGDITCE 120
             A+  E + L+Q  ECRICQ+ED+ + LE PCAC+GSLKYAHRKC+Q+WCNEKGDITCE
Sbjct: 61  YYAVADEEEPLLQSVECRICQEEDSTKNLEAPCACNGSLKYAHRKCVQRWCNEKGDITCE 120

Query: 121 ICHQPYQPDYTAPPPPPRIEETSIDIGGGWTITGTPLNLQDPRLLAIAEAERNLLEAEYD 180
           ICHQPYQ  YTAPPPPP  +ET I IG  W   G PL+L DPR+LA+A AER+ LEA+YD
Sbjct: 121 ICHQPYQHGYTAPPPPPP-DETIIHIGDDWE-NGVPLDLTDPRILAMAAAERHFLEADYD 180

Query: 181 EYAASDASGAAFCRAAALILMILLFLRHALEV-TDPDGDDYVSAFFSIFLLRAAGFLLPC 240
           EY+ +++SGAAFCR+AALILM LL LR AL + T+PD +D  +AFFS+FLLRAAGFLLPC
Sbjct: 181 EYSENNSSGAAFCRSAALILMALLLLRDALNLTTNPDDEDDPTAFFSLFLLRAAGFLLPC 240

Query: 241 YIMACAVNILQRRQRRQEQEAAALGAAQVAFVLQSG--RHRGLQFAIASGPQVA 292
           YIMA A+ ILQR  RRQ QEAAAL AA+V F++  G  + RGL FA+A  P ++
Sbjct: 241 YIMAWAIGILQR--RRQRQEAAALAAAEVTFMIHGGGPQRRGLHFAVAPQPPIS 282

BLAST of MS015171.1 vs. TAIR 10
Match: AT2G02960.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 298.1 bits (762), Expect = 7.7e-81
Identity = 156/225 (69.33%), Postives = 180/225 (80.00%), Query Frame = 0

Query: 65  DGENDSLIQVAECRICQDEDTIQKLETPCACSGSLKYAHRKCIQQWCNEKGDITCEICHQ 124
           D EN+ LI   ECRIC DE  ++ LE+PCACSGSLKYAHRKC+Q+WCNEKG+I CEICHQ
Sbjct: 31  DDENEPLIVSGECRICSDESPVENLESPCACSGSLKYAHRKCVQRWCNEKGNIICEICHQ 90

Query: 125 PYQPDYTAPPPPPRIEETSIDIGGGWTITGTPLNLQDPRLLAIAEAERNLLEAEYDEYAA 184
           PYQP YTAPPPP + EET+IDIGGGWTI+G  L++ DPRLLAIAEAER  LE+EY EY A
Sbjct: 91  PYQPGYTAPPPPLQPEETTIDIGGGWTISG--LDVHDPRLLAIAEAERRYLESEYVEYTA 150

Query: 185 SDASGAAFCRAAALILMILLFLRHALEVT-DPDG-DDYVSAFFSIFLLRAAGFLLPCYIM 244
           S ASGAAFCR+AALILM LL LRHAL +T D DG +D  S+  S+ LLRAAGFLLPCYIM
Sbjct: 151 SSASGAAFCRSAALILMALLLLRHALTITDDTDGEEDDPSSILSLVLLRAAGFLLPCYIM 210

Query: 245 ACAVNILQRRQRRQEQEAAALGAAQVAFVLQSGRHRGLQFAIASG 288
           A A++ILQR  RRQ QEAAAL A Q A VLQSG+ R + F ++ G
Sbjct: 211 AWAISILQR--RRQRQEAAAL-ATQFALVLQSGQPRTVHFTVSPG 250

BLAST of MS015171.1 vs. TAIR 10
Match: AT2G02960.4 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 298.1 bits (762), Expect = 7.7e-81
Identity = 156/225 (69.33%), Postives = 180/225 (80.00%), Query Frame = 0

Query: 65  DGENDSLIQVAECRICQDEDTIQKLETPCACSGSLKYAHRKCIQQWCNEKGDITCEICHQ 124
           D EN+ LI   ECRIC DE  ++ LE+PCACSGSLKYAHRKC+Q+WCNEKG+I CEICHQ
Sbjct: 31  DDENEPLIVSGECRICSDESPVENLESPCACSGSLKYAHRKCVQRWCNEKGNIICEICHQ 90

Query: 125 PYQPDYTAPPPPPRIEETSIDIGGGWTITGTPLNLQDPRLLAIAEAERNLLEAEYDEYAA 184
           PYQP YTAPPPP + EET+IDIGGGWTI+G  L++ DPRLLAIAEAER  LE+EY EY A
Sbjct: 91  PYQPGYTAPPPPLQPEETTIDIGGGWTISG--LDVHDPRLLAIAEAERRYLESEYVEYTA 150

Query: 185 SDASGAAFCRAAALILMILLFLRHALEVT-DPDG-DDYVSAFFSIFLLRAAGFLLPCYIM 244
           S ASGAAFCR+AALILM LL LRHAL +T D DG +D  S+  S+ LLRAAGFLLPCYIM
Sbjct: 151 SSASGAAFCRSAALILMALLLLRHALTITDDTDGEEDDPSSILSLVLLRAAGFLLPCYIM 210

Query: 245 ACAVNILQRRQRRQEQEAAALGAAQVAFVLQSGRHRGLQFAIASG 288
           A A++ILQR  RRQ QEAAAL A Q A VLQSG+ R + F ++ G
Sbjct: 211 AWAISILQR--RRQRQEAAAL-ATQFALVLQSGQPRTVHFTVSPG 250

BLAST of MS015171.1 vs. TAIR 10
Match: AT2G02960.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 298.1 bits (762), Expect = 7.7e-81
Identity = 156/225 (69.33%), Postives = 180/225 (80.00%), Query Frame = 0

Query: 65  DGENDSLIQVAECRICQDEDTIQKLETPCACSGSLKYAHRKCIQQWCNEKGDITCEICHQ 124
           D EN+ LI   ECRIC DE  ++ LE+PCACSGSLKYAHRKC+Q+WCNEKG+I CEICHQ
Sbjct: 31  DDENEPLIVSGECRICSDESPVENLESPCACSGSLKYAHRKCVQRWCNEKGNIICEICHQ 90

Query: 125 PYQPDYTAPPPPPRIEETSIDIGGGWTITGTPLNLQDPRLLAIAEAERNLLEAEYDEYAA 184
           PYQP YTAPPPP + EET+IDIGGGWTI+G  L++ DPRLLAIAEAER  LE+EY EY A
Sbjct: 91  PYQPGYTAPPPPLQPEETTIDIGGGWTISG--LDVHDPRLLAIAEAERRYLESEYVEYTA 150

Query: 185 SDASGAAFCRAAALILMILLFLRHALEVT-DPDG-DDYVSAFFSIFLLRAAGFLLPCYIM 244
           S ASGAAFCR+AALILM LL LRHAL +T D DG +D  S+  S+ LLRAAGFLLPCYIM
Sbjct: 151 SSASGAAFCRSAALILMALLLLRHALTITDDTDGEEDDPSSILSLVLLRAAGFLLPCYIM 210

Query: 245 ACAVNILQRRQRRQEQEAAALGAAQVAFVLQSGRHRGLQFAIASG 288
           A A++ILQR  RRQ QEAAAL A Q A VLQSG+ R + F ++ G
Sbjct: 211 AWAISILQR--RRQRQEAAAL-ATQFALVLQSGQPRTVHFTVSPG 250

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022151197.13.9e-16799.66uncharacterized protein LOC111019176 [Momordica charantia][more]
XP_008446351.13.3e-14286.87PREDICTED: uncharacterized protein LOC103489118 [Cucumis melo] >KAA0034417.1 zin... [more]
XP_023552876.15.6e-14287.21uncharacterized protein LOC111810398 [Cucurbita pepo subsp. pepo][more]
XP_038891937.19.6e-14287.21uncharacterized protein LOC120081275 [Benincasa hispida][more]
XP_022957378.13.7e-14187.46uncharacterized protein LOC111458795 [Cucurbita moschata] >XP_022957379.1 unchar... [more]
Match NameE-valueIdentityDescription
Q0P4961.0e-0832.93E3 ubiquitin-protein ligase MARCHF4 OS=Danio rerio OX=7955 GN=marchf4 PE=2 SV=1[more]
F4JKK01.4e-0745.10Probable E3 ubiquitin ligase SUD1 OS=Arabidopsis thaliana OX=3702 GN=SUD1 PE=1 S... [more]
Q80TE31.9e-0731.53E3 ubiquitin-protein ligase MARCHF4 OS=Mus musculus OX=10090 GN=Marchf4 PE=2 SV=... [more]
Q86YJ51.9e-0735.38E3 ubiquitin-protein ligase MARCHF9 OS=Homo sapiens OX=9606 GN=MARCHF9 PE=1 SV=2[more]
Q3TZ871.9e-0735.38E3 ubiquitin-protein ligase MARCHF9 OS=Mus musculus OX=10090 GN=Marchf9 PE=2 SV=... [more]
Match NameE-valueIdentityDescription
A0A6J1DCU21.9e-16799.66uncharacterized protein LOC111019176 OS=Momordica charantia OX=3673 GN=LOC111019... [more]
A0A5A7SYR01.6e-14286.87Zinc finger family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... [more]
A0A1S3BFI91.6e-14286.87uncharacterized protein LOC103489118 OS=Cucumis melo OX=3656 GN=LOC103489118 PE=... [more]
A0A6J1GZ221.8e-14187.46uncharacterized protein LOC111458795 OS=Cucurbita moschata OX=3662 GN=LOC1114587... [more]
A0A6J1JZ003.0e-14186.53uncharacterized protein LOC111489151 OS=Cucurbita maxima OX=3661 GN=LOC111489151... [more]
Match NameE-valueIdentityDescription
AT3G47550.39.1e-8256.80RING/FYVE/PHD zinc finger superfamily protein [more]
AT3G47550.69.1e-8256.80RING/FYVE/PHD zinc finger superfamily protein [more]
AT2G02960.27.7e-8169.33RING/FYVE/PHD zinc finger superfamily protein [more]
AT2G02960.47.7e-8169.33RING/FYVE/PHD zinc finger superfamily protein [more]
AT2G02960.17.7e-8169.33RING/FYVE/PHD zinc finger superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 165..185
NoneNo IPR availablePANTHERPTHR23012:SF181E3 UBIQUITIN-PROTEIN LIGASE MARCH-RELATEDcoord: 1..282
NoneNo IPR availableCDDcd16495RING_CH-C4HC3_MARCHcoord: 77..123
e-value: 1.02994E-18
score: 76.212
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 75..127
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 76..123
e-value: 7.2E-19
score: 78.7
IPR011016Zinc finger, RING-CH-typePFAMPF12906RINGvcoord: 77..122
e-value: 4.1E-13
score: 49.2
IPR011016Zinc finger, RING-CH-typePROSITEPS51292ZF_RING_CHcoord: 69..129
score: 22.889183
IPR022143Protein of unknown function DUF3675PFAMPF12428DUF3675coord: 128..245
e-value: 3.1E-42
score: 143.9
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 63..133
e-value: 4.4E-20
score: 73.0
IPR033275E3 ubiquitin-protein ligase MARCH-likePANTHERPTHR23012RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAININGcoord: 1..282

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MS015171MS015171gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MS015171.1-cdsMS015171.1-cds-scaffold2:1634553..1634675CDS
MS015171.1-cdsMS015171.1-cds-scaffold2:1634776..1634865CDS
MS015171.1-cdsMS015171.1-cds-scaffold2:1634978..1635058CDS
MS015171.1-cdsMS015171.1-cds-scaffold2:1635340..1635496CDS
MS015171.1-cdsMS015171.1-cds-scaffold2:1635669..1635736CDS
MS015171.1-cdsMS015171.1-cds-scaffold2:1636093..1636164CDS
MS015171.1-cdsMS015171.1-cds-scaffold2:1636369..1636668CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MS015171.1MS015171.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding