MS014640.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS014640.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Pectin lyase-like superfamily protein
Location	scaffold1096: 249232 .. 261744 (+)
Sequence length	1260
RNA-Seq Expression	MS014640.1
Synteny	MS014640.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACATCTCTTTCCTTTCTTCTTACCTTGCTATTACTAGCATTGGTTGCTGTCAACGCCGACCCGCCCCCGATCCCGCACACGCCGGACCCTTTTAAGAACGTCCATTTAGGGAAGGATATTAAACACCGGAACAACGAAGTTGTGTTTAATGTGCTGAATTACGGTGCCAAGGCCGATGGCAAGACGGATAGTTCTATGGTTTGTTGTTGTCGTTGTCCTCGTTGTTGTTGTTTAAGAATGTTGTTTGGGTTGTTACGGATTTGGAATGTGAATTTGGGTCTGTTTGTTTTTTTGCAGAATTTAATAAGGACATGGGTTGCAGCATGTCATTCCAAGGGAGCGGCAAGAGTTGTGATTCCTAGTGGTACTTTCTTCATCAATCAAGTTGTATTTGCAGGGCCATGTACCTGTCTGAGTCCGATCATTGTTCAGATCGACGCGGTCTTGAAAGGTGGTACCGATTTAAGTGAATTCGTCTCCGATGAATGGATATTGTTTGAGAAGATCAACGGCTTGATAGTCACTGGTAGAGGTACTTTGGATGGACAAGGTGGTTCTGTTTGGAAATACAACGACTGCGGTATGAATCCTGATTGCACGAAGCTTGCTGTTGTAAGTTGTAGATCGCCTTAATTACCGATATTTTCGACGAAAAACAGGACCCCAAAAATTCTCACTCTTTTTTTCCCCTTCTCCTAGAATTTGAAACTCAATGGCATCACTCATGGACTTGTGAAAGGCATCACTTCCACCAACAGCAAGGGGTTTCACATGTTCATCACAAATAGCCAAGGCGTTAGGGTGCGAAGAATGCACATTACGGCGCCAGAAGACAGCCCCAACACCGATGGCATACATCTCAGCCGCTCCAACAATGTGAAGATATCAAGATCAGTCATTGCCACCGGTGACGACTGCATCTCCATCGGTCGAGGATCGACGAATGTCGTCATCAACAAAGTAACCTGCGGTCCTGGACACGGTATCAGGTAACACTCAATCTTCACCTGCAAAATCAAACAGAGTTGTTTCTACCCTGCTTAATCTGTGTCCTGTTCCACCATCATACAGCATTGGCAGCCTCGGAAAGTACCAGGACGAGGAGGACGTACGCGGCGTCACAGTCAGAAACTGCACATTGCTGAGCACAGACAATGGACTGAGGATCAAAACATGGCCGGACTCACCCCCAAGTGCAGCATCAGGCATCATTTTCCAAGACATCAACATGCTGAATGTCAAGAACCCCATCCTCATAGACCAAGAGTACAGCTGCTCAACCACTTGCAAAAAGCCGGTTCGTCGCCTTCGCTCTCGTTCCCGTTTCTTGTTTTCCGTTTCCCATTTCTCGTTTCCCATTTCTTTCTAACCTCGTTTCTTTCTAACAAAATGCAGCCATCACGAGTGAAGATCAGCGATGTTCATTTCATCAATGTCCAAGGATCCTCAATCTCACCGGTGGCAGTAAACTTCAAGTGCAGCAAGCAGTTCCCTTGCCAGAACATTGAGATGCTGAACATAAATCTCAAGTACACAGGCCCTCCCAAAGCCAATGCCCCGTTTATCTCCGCTTGTACAAATGCTAAAGTAGGATACAAAGGCATTCAATTCCCACCCCCTTGCAAATGAGACTCCCCACCCTCAAGTTTATGATGTGTTCTTTGTTCTTTTCTTTTTTTTGTGTTGATGAAGTTTGTAAAGTGGATTGATTCACATGCGATGCTGCAGTGGCTCAATCTAATGCACAGAATCTTTTGAGAAGCAGTGGTTTTTCTCTACTGATCAAGTAATGTGGTTTGTTATAGTGAATATGATGCAGAGAAAAACAGCAGCAAAAGCCACACTAATGAACCCAGATTCAAAGATTGTTAAACATATTAATTAACACAAATGAAAAAATAATGAATTTATAATAATAAAAAAGGTAAAAACAGGAAGAAAGTAGTGAGGATGTGGATGCCAATATAGCCCAAATTATCAGAGAAGATTTTAGATTACAGAGACTAAGAGAAAAATCATTTGGCCTTTTTAAGTTCAAATTATAGAGAGACTTATTGTTGCAAAAAGTTCTTATAATATTGCTAATCTCAGGAGAAAGCCAGAAATTCTCATAAAATTTTGATTTTTTTTTTCTTTTTAAATTTATATGAATAAACAGTTTTGGTAATGGTTTATTATTTCTGTTTTTTAACTGTGAAAAAGAAATAGAAACTTAGTAACAATTTTATTGTTACTTGTTTTTTATTATTTAAAATTTTAAACCAAAAAGTATAAGTTTTATTTGAAGATCAAAATTTCAAGTATTTATATTATTTAATACTTATTAGGGATTTTATAAGGCAAGAATATCAAAATAGTGCTTTTATTTATATTTTATAAAAAAATATAAATGAAAAAAAAAACTTAAAGGTCATTTTTTAGTTTCTCATTTCTCATTTCTGTTTATTAGTTTTATTTCTGAGAAAGATAAATATTTGATAATTAAACGGCTGAAAGATTGAATAGAGAGACAGAAAACGGAAATGCATTAAAATGACCATAAACGAAGCATTTATAACTCGACGAAGAAACTCCACATTCATAAACTAGTTGAAACTCAAGTAATTAATGGCAGATTTACCTATTTAAATGGCCAATCATCGCCATTTTTTTGCAGTGAGAATTTGTTCTCAGAAACCATGAAGCTTTCACCTCTTCTGATCTTCTTCTGTTTTCTTCTAGCCGTTTCCGTGTCTCTCAGTTGCGCCAGAGATTTTGAATCCGCCGCCGACGCATTGGATTTCCTTCGTTCGCCGCCGGACGCGGCGGAGCCTCCCGGAGGAGACCCATGGCGGATTCCACGTCTTTTTGATGTTACTGATTATGGAGCAGTTGCTGATGGAAAGACAGAGGCCAGTTTGGTAAATCGCTTGCTTTTATACACAAATTCCACACACACACACATATATATTATTTTAATTTATTTTTAAAAAGACATATACTTACGTGTTAACAGATGAAATTTATTTATATCCTCATTGAAAAATTGGCATTTTCAAAAATAAATTTATGTATGTTTTTTTTATTTCTCTACTATATTTGTCAAATATTCAGTGGCGGTGAACACTAAATAGTTACTTACTGGTCACCATTCACCTCAGTATTTTTTAAAAATATTTTTGATTGTAAGAACAATTTCTTTTGAACGATGATAGTTATATAATTTTTAAAAATATTTTCGAGATTTGTTCTTATTTTTTAAATTTTAAAAGGAAAAAAGAAAGTAGTTTTTAGAGATTTGTTCTTATTTTTTAAATTTTGACTATAAATTTAAATATGTTTTCAATGGGAGTGATAATCTTACTAAATGAAAATGTATAAAATAAGTTTTAGTTTTTAAAAATGGAAAATAAAAAAATAAAATGATAACGAAAATATTTTATCTAGCCGTAAACTCAACTCCACCAATCAAAATGTCCGTTATAAACAAAGGAATCAATACTCGCAAATCAACGGGATTAGAAAATTTTGAAATTTCGTTAAAAAGTTTAGCCTATAAATTTATATAAAAGTTAAAAAGAAAATATTTAAATATTATTTAAGTTTCTAAATTTTCGTATTTATTACAATTCAATCCCACAACATTTTATTTTACGGAAATGCTGAACTTTAACAAAATAATAATTTTTATCTGTCAATTTTTCGAATATCTATTTTAGTCAATATACACACTAACACATGTTAACGAAGTTATTATTTATTTGTTAAAAAAAACGGTAAGAAAAAAAATGTAACCGAGTGAAAATTTGGTTGAGGTATATAGGCATTCATGGCAGCTTGGAAGGAGGCATGCGCTCACCTGGGAAGTTCGGTGTTGTACGTACCACACGGTACATTCTTCGTCGGAGAAACTGTATTTTCCGGCCCCTGTTTCAACGACCTCTCTCCCAAAGTCCTCATTTTAGGAACCTTGAGAGCTCCGACCGCCCTCGACGACACCGACGTCTGGATCCAATTCAAAAGCCTCCATCGCCTTGACATCACCGGTGGCGACGCTAACGCCACCGCCATTCTTGACGGTAAAGGCGCTGAAACCTGGTCCAATTCTGCCTGCCGCCGCAACTCCACTTGCGACATGTTCCCCATAGTAAGTATTACAATAATCATATGAAATTTAAAAGTTTTTTTTTTTTTTTTTGAAACGCAATTTTATATCTAATCCATGCTAAGCTTGAGTAATGTCTAATAAATTTTTGAATGTTAAGTTTTATTATTATGTATTTGATAATTTCTAAAAAATATATCACTAAATCAATTAGACATTAAATTAAATTAAAATGAGTGGGATAGCTTATTAGATTCAAAATTGAAAATTTAGATAATTACGAGGCATGTAAATTATTTTATTATTATTATTAGTGGGGTTGAGAGATTCGAACTCATATCTATTTATGAGGGATAATGTCAATTACCGAGCTAAATTCATGTTAGCGAGACATTTAAAATTTGGGAATATATTATACACAAATTAAATTAAAAGTTTATAGACTATTAGACACTAACTTGCCAACCAGAATGTCACGGATATATCCAATCATGGGGTGAGACTTCGAATGTCACGGACAATTGCCCTCACGCTCCCTTCTATTATTATTATTTTTTTAAATAAAAACACCAAAATTTAACATTTTCTTTTCTCCAAATTTGGTGGGGATGAGTCTTTGAAGCTGAGCGATGTGTCATATGGAAATGTAAGCAATATTAGGGTTATGGACAGCAAAGGTTTCCATGTCGCTGTTCATGATTGTGACAATATTCATCTCTCTGGGTTGAATATTAGAGCTCCTTCGGATAGCCAGAACACTGATGGCATCCATGTTAGTCACTCTACCAACATCAACATTACTTCCTCCAACATCGGCGTCGGCGACGATTGTGTTTCCATCGGACCCGGCAGCGTCAACGTGTTCGTTTACGACGTTAATTGTGGTCCTGGACACGGAATTAGGTATCATATCTACTCTCTACTCTCTAATTTCTTTGTGTGTTATTTTGTAGAAGTATATGAAAATGATAGAATCTGGAACAAGTAGTGTTTTGAGTATTTGGAATAAGGAAAAAATACTTGTGAGGACAAGATTCCAGCTCCTTACCGGTGAGGGGTTAAGTATTTTCGTTAGAATTATGATCTGTGTCTTGTCCACCATCATGACAGCGTTGGCAGCCTCGGGAAGTACCCCGATGAGGAGGACGTGCGGGGCGTCACAATAAAAAACTGCACATTGCTGGAAACAGACAATGGAGTGAGGATCAAAACATGGCCAGACTCACCCCCAAGTGCAGCATCAGGCATCATTTTCCAAGACATCAACATGCTGAATGTCAAGAACCCCATCCTCATAGACCAAGAGTACAGCTGCTCAACCACTTGCAAGGAGCCGGTTCGTCGTCTTCGCTCTCTCGTTTTCGTTTCCTGTTTCTCGTTTCCCATTTCTTTCAACCTCGTTTCTTTCCAACAAAATGCAGCCATCGCGAGTGAAGATCAGCGACGTTCATTTCATCAACGTCCAAGGATCCTCAATCTCACCGGTGGCAGTAAACTTGAAGTGCAGCAAGCAGTTCCCTTGCCAGAACATTGAGATGTCGAACATAAATCTCACGTACACAGGCCCTTCCGAAGCCAACGCGCCGTTCATCTCCCATTGTACGAATGCTAAAGTAGGCTACAAAGGCATTCAATTCCCACCCCCTTGCAAATTAGACCCTCAGCCCTCAAATTTATGATGTGTTTTTTGTACTCTCTTTTTTGGCTCAATCTACTACTGAACAAATTAAAGTAATAATAAATTTTGATTCAATTTATTACTATATTATTGATAGTAAAAAAAAATTATTATAATAATTGATTTAATATTAATAAATAATGAATAATTAAAATAAAATTACGTCAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTTAATATACATATTATTAAATTTTATTATTCTAATATTTAAAAATAATAACTTTTATTTTAGAAAATTTATTTATTGATTAATATGAAAATTATAATATTATATAATAAAATCAGATCAACTAATAAAAATTGAAGTATAAATGAATAAAAAATTAATTAAATCTAATTAATAGAGGGGAGAGAAAGGATACAAGTGGTAAAGTAATTATAATAAATACGTAGAGCTCACGAAATGAAATAAGGAATGATAATAGTATTGATGGATTTGTAGGAGAGTAATACGATAAAAAAGAATGAAATTTTTCAACAATAATAAGCAAACGGATCCTATTATGAATTTTTATAAGGGGAGGATAACAAAATAATACATTTATTTTTATTTTATAAAAAATAGAAAGAAAAAAGAAAGAAACTTAAAAGTTGATTTCNGTCAAATTATAAATTAAAAATATTATTTTATTGATTTAAAAAATGCATAAAAAATATTAAAAAGTAATTACAACATAATAAATTTGAATATTTAGTTTACAAAACTAATGTTCATATAAATTAATTTTCAATTTAAAATTTTAGAGCACAACAAACCAGGATGATTTTCAAACATATATATTTTTTCTATAATTAAAAAAAAGAAACATAAACGAAAATGTTATCAACGAGTCCTTAACTTATCTTATTTTCATTTCTTAAAAATGGATAGGAATTACTTAAAGTGTTGAAGTTTTAAAGATTAAATAGACAGGAAACTTAAATTTCAGGACGAAAATATATTTTACGGATTGATTTATATAATTCTTTTAAAGAATTGGACCTTCTTGGTTCTTCACCGTGCAATGAGGTTTTTGAACGGAATAGTCATTTTAAAGGGCCAACTTTGAAATATGTTCCCACCCTAACTTTTATGTTTTCTAACAATTTGCGGGCATCATTTTTATATGAAATTATATATTTGCCCTTCTTAATTTTTTTCTTGAATTTCTCTACTTTCTCTTCCCTTTTTTCTCCTCCCTCCTCTCTCGGTTCCCCTCCTCCCTCTCCTTGATTCTTCATCTTCCATATGCATACTTCTTTTTCTCTTCCATTAAGGTCTCATTTACCTCCCCGCAATCGTAATCAATGAATCAAAACTTTGATCCTCTTTGATGGTGTTTACCAAATTGTAAGAATGTAATCAAATGGTGGGACCCACCTCAAACTTATTCCGTGTATTAATAATTTACCACTTTTACGCTCTCTCAATCCATATCATTTTTAATTAGTTTTTTTAGGTTAAAAAACACATTTGGTCCCTGAACTTTTATTAAAGTAACGATTTAGTCCATAAACTTTCAAATGTAACAATTTAGTCCCTGAATTTTCAAATTAATAATAATTTAGTCATTGCAAGATTCTGTTAGTGTTTAACATGAATATGACGTGGAATGCCAATTAGGATGCCACACCAACGAATAACGTGCTCCCAGTCCCCCTGCGATTCTCATCTCCCGGTCTCCACCCTTACGATTAGACCACCGGCTTCACCGTCCGGCTGTCGGAGATGAGTGCCTCGCAAGACTTAATTCAGGCCAAATTGGGGCTGGATTTTGGTCCTCAGCCAAAGCCGAAAGCAAAACGAACAAATTCCCTTTTTCCTACGCAATCTTCGAGATGGGTTTTCTTTTGGACTTAATCGATTTTCAAAATCTAACAATTGTAATGCTCTGGTTTTTTATTTACAATTATCCTGCAATTCTTCTTCAACTGCTTTGATTTTTTCTTCCATTTCTCAGACATGCACTGGGGGTTCGTCCTCTGCGAGATTTCCTTTTGTCTTGAGGCTGAGGCTGAGGCTGAGGCCGTAAATTTCACCTGTGGCCGTAAATTTCGGCACATTTGTTTTTTGTTTTTTGTATTATTTTTTGGGTTAAAGCTTGTCCTCGGTGGCATTTTATTTGGCATTCCACCCATATTCCACCCATATTTCTGTTAAATCCTAATAGAATAGTTAGCGCTAAGGACTAAATATTACTAATTGAATTATATTACTAATTTAAAAATTCAGAGATTTTTTCATAAAAAAAATTTCAGGGACCAAATATGTTTTTAATTTTTTTTTTTTGTATACTTTTCTNNNNNNTTTATTTGATGTAATTTTATTTTAATTATTAATATTAGATAAATTGTTATAATAAAAAATATTTACTTTATTATTATTGTAATTTTAAAAAGATCGGCAATTAGCTAAATTTGGGAATGGTGACATTTTTAAAGTAGGCCGACTATTGAGCTAAAAAACCCCGCAATGCACTGAACAAAACGGCCGAAAGAGTCAACAGAGAAACCGAAAACGGAAATGAATTAAAATGACCAGAAACGAAGCATTTATAACTCGACGAAGAAACTCCACATTCAGAAACTAGCTGAAACTCAAGTAATTAATGGCAGATTTACCTATTTAAATGGCCAATCCTCGCCATTTTTTTGCAGTAAGAATTTGTTCTCAGAAACCATGAAGCTTTCACCTCTTCTGATCTTCTTCTGTTTTCTTCTAGCCGTTTCCGTGTCTCTCAGTTGTGCCACAGATTTTGAATCCGCCGCCGATGCATTGGATTTCCTTCGTTCGCCGCCGGACGCGGCGGAGCCTCCCGGAGGAGACCCGTGGCGGATTCCACGTCTTTTTGATGTTACTGATTATGGAGCAGTTCCTGATGGAAATACAGAGAGCAGTTTGGTAAATCACTTGCTTTTATACACAAATTCCGTATATATATTATTTTATTCCATTATATTTTAATTTATTTTTAAAAGAAAAATATTTACGTGAAACTTATTTATATGGTTGAAAAATTGAAAGTTTATTATTAAAAAAACAAATCTATATTTTTTTATTTCTCTGTCTTATCCTTCGTGGGAATAAGATAACTTTGGAGCCAATTATTTCCCTTATAATTGTGAACAGGGGTGTCATAATTAACAATATATACCTCAATTAATTGAGGATTCTCCCCCCGACTTTTGAGATGGTATTCAGTGAGCTAAAATTTGATTATATTCATAGTTCTTTGAATAGGCAAACTGTTTTATTAGTTAAGTGTGTTATTTCTAAACATTTCTATGTTCGTTGGGACAATTGTTTTCTCTGGTGGATTGTGATGGTGATGTGTGGTTACCACCATTCAGATTGAACCCCTTAGTTGTATTATTCCTATTTAAGTAAGAACCAACCGTATTTTCTAAAATATTTTTAAAATTGAGAAAAAGAAAATTGAACCACTCTAAATTTAAATTTTATAGAATTAAAAATCTAACCTTGAATAAATGTGACCTCAAAACTAATTTTACAATAAATTTAACTTGTAAAATATTTGTTGTAAAAAAAAAACATGTAAAATATTTAAAATGAAACCACAAAAATTAGAAATCAAGGACTCGTTTGGTAATCAATTTCGTTTTTGGTTTGTTATTTTTAAAATTAACCTTATAAACACTTTTTTTTCTATCTATTTATTTGTTTCATTGTTTTTTATATAATTAAAAAAAATTTACAAGCTTGTTTTTGTTTTTTAAATTTGATTAAAAATTCATATGTTTACATTCCTTTTAAATTTGATTATACTATTCTAAAATGTATAATCACAATTTTAATGTTAAAAAAGATAATTTTCAAATTTGAGTATTTAAAAGGAAGGCTAAATATGCCGAATTGTTTCTTATCTCTTAAAATTTCCACAACTTTTTGTTCTTATATCTTTATAAAATTTTTAACTTACCCTTAATATATTAGATATTTCCATTTATGTCATTCGGAAGAAAAATGTATTAAAATTTATGGTATCGTTTAACATATTTGAACACGTGGTATCCACTTATATATCCGTATATATATATTCAAAATCACTATAATGCAAATCTAAAAAACAAGCTTAATTAAAAAAACAAAATGTATCAAATGATACTGAAAATATTTCGTCTGGCCACAAAATCTAGCAAGCAAAAAATTACCCAGATCCACTCATGAAAATGTCCCTTAAAAACAAAAGAACCGATTCTTTTTATTTTATTTTTAATCTTATTTTCCTATCAAATTTGAACACGACATTACCATCAATATTGTTTTAAAATATAAATATTACTTCACACGGAAGAGTTTTCGTTAGGTGTAAAACCTGTATTAAATTTTTGAAAAAATGAACTAAAATGAACCAAAATTAAAGATAATAATCCAAATAAACATTTTCGGACTAAAATGAATAAATATTAAAATACTAGATGAAAATAGTATTTTAACTATATATATTAATAGAGGGAAAATTTTGTTAAGGTATAGGCATTCATGGTAGCGTGGGAGGAGGCATGCGCTTATCCAGGAAGGTCGGTGTTGTACGTACCACAGGGCACATTCTTCGTCGGAGAAACTGTATTTTCCGGCCCCTGTTTCAACTACCTCTCTCCCAAAGTCCTCATTTTAGGAACCTTGAGAGCTCCGACCGCCCTCGACGACGCCGACGTCTGGATCCACTTCAAAAGCCTCCATCACCTCGACATCACTGGTGGCGACACCAATGCCACCGCCATTCTCGACGGTCAGGGCGCTCAAACCTGGTCCAATTCTGCCTGCCGTCGCCACTTCACTTGCGACATATTTTCCACTGTAAGTATATTTAGAGACCATAATAAATCAATGCATACCTTAATTAGTTGAGTCAGGCTTTAATTTAATTTTCAATTTTATGTCTATGCATCGATAAATTTTTGGTACGTCAGATAAGTTCTTAAATATTCAATTTTGTTATATATTCTTATATTTTTATTAAAAAAATTCACTAAATCAATTAGGTATTAAAATTAAACGTTCTTTCATTTTAAAACGAGTTGGGGTAACTTATTAGATTCATAAGATAACTATGAGATATTTTAAAATTTAGGGATTTATTAGACACAAATTAAATTAAAAGTTTATCGACTATCAATAGACACTATTTAAAGTGTATAGACTTATTTTTAATAGTGCTAAATTAAAAATTTATTTACAAAATATACCTCTCCTCAAACTTATTCTAAGAATAATGTTTGACAAATTGTAAAGAAACTACCTATGTTACTCCATAGTTTTCAACTTGCAAAGTGCCTACAGTTATTCGAGCACTATTTCCCAAACAAGTTTCGGGAAAGGTATATTTTGCAAATAAGTTCCTAATTTAGCATTATTAAAAAAATCTGTGACTTATTAAAGGTGTAATTTTACCTTTGCTGTTAGTTGCATTGCAATTGCCCTCCCCTTCTATTTTTTGAATCAAAACACCAAAATCCAACCTTTTTCTCTCTCCCAATTTGGTGGATCAGTCTTTGAAGCTGAGCGATGTGTCATATGGAAGCGTGAGCAATATTGAGGTCGTGGACAGCAAAGGTTTCCATGTCGCTCTTCATGGTTGTGACAATATTCATCTCTCTGGGTTCAATATTAGAGCTCCATGGGACAGCCAGAACACCGACGGCATCCATGTTAGTCACTCTACCAACATCAACATTACTTCCTCCGATATTGGCGTCGGCGACGATTGTGTTTCCATCGGACCCGGCAGCGTTAACGTGTCCGTTTCCGACATTAACTGTGGTCCGGGACATGGAATTAGGTATCTTTATCTACTATCTACTTTCTACTTTCTAATTAGTGTTGTGTTTGTAGAAAAAAGTACGTGAAATGGTAGAATCTTGAACAAGCAGTGTTTTTGGGTATTTGGAATAATATAATGCAGTGTGGGGAGCCTAGGGAGGTACCAAAATGAGATGGATGTGGTGGGAATAAGAGTGGAGAATTGTTCCATAAATGGCACTACAAATGGAGTGAGGATAAAGACATGGCCAGGACAGCATTCAAGCATAGCTACCAATTTGACATTTCAAAACATTGTCATGTCCAATGTCTCAAACCCCATTGTCATTGACCAACAATATTGTCCCAACCATTCTTGCAAAACACATGAGGTAATTAACTACTCTTAATATGACCCTACTCCACATAAAACTCATTCTTAACCATTAACAATTAACAAAACGCTGGTGTGACATGTTCGTTTGATAAATTTTGGCTGAGTTAGTGTAATGTGTAACAAAACAGTGTCGGATAGATAACGATGATCATGTCACATTCAGTGTTATGATTATGGTATTACCTACAAGTAGTACTTTTGGTCTGACTCGAAGTTGTGTTTGAGAATAGTTTTAGTTTAGAAAAATACTTTAATTAATATACTTTCATTAAAAGCACTTGTTTTTGAGGCAGGCATCGAATGTGAAGCTGAGTGAGATAAAGATGAGAAACATAAGTGGGAGTTACAACTCAGAGTTTGCAGTAAATTTGCAGTGCAGCTCAGGGAAGGCTTGTGAGAAAATTGAGCTTTCTTACATAAATCTCACTGCCACTCAGCCACCTGATCAAAACCACCAAATTGGGCGATTCAACTGCAACGGTGCCCTCCATGCCTTCACTATTCTTAATTCTACATTT

mRNA sequence

ATGACATCTCTTTCCTTTCTTCTTACCTTGCTATTACTAGCATTGGTTGCTGTCAACGCCGACCCGCCCCCGATCCCGCACACGCCGGACCCTTTTAAGAACGTCCATTTAGGGAAGGATATTAAACACCGGAACAACGAAGTTGTGTTTAATGTGCTGAATTACGGTGCCAAGGCCGATGGCAAGACGGATAGTTCTATGAATTTAATAAGGACATGGGTTGCAGCATGTCATTCCAAGGGAGCGGCAAGAGTTGTGATTCCTAGTGGTACTTTCTTCATCAATCAAGTTGTATTTGCAGGGCCATGTACCTGTCTGAGTCCGATCATTGTTCAGATCGACGCGGTCTTGAAAGGTGGTACCGATTTAAGTGAATTCGTCTCCGATGAATGGATATTGTTTGAGAAGATCAACGGCTTGATAGTCACTGGTAGAGGTACTTTGGATGGACAAGGTGGTTCTGTTTGGAAATACAACGACTGCGGTATGAATCCTGATTGCACGAAGCTTGCTGTTAATTTGAAACTCAATGGCATCACTCATGGACTTGTGAAAGGCATCACTTCCACCAACAGCAAGGGGTTTCACATGTTCATCACAAATAGCCAAGGCGTTAGGGTGCGAAGAATGCACATTACGGCGCCAGAAGACAGCCCCAACACCGATGGCATACATCTCAGCCGCTCCAACAATGTGAAGATATCAAGATCAGTCATTGCCACCGGTGACGACTGCATCTCCATCGGTCGAGGATCGACGAATGTCGTCATCAACAAAGTAACCTGCGGTCCTGGACACGGTATCAGTGTGGGGAGCCTAGGGAGGTACCAAAATGAGATGGATGTGGTGGGAATAAGAGTGGAGAATTGTTCCATAAATGGCACTACAAATGGAGTGAGGATAAAGACATGGCCAGGACAGCATTCAAGCATAGCTACCAATTTGACATTTCAAAACATTGTCATGTCCAATGTCTCAAACCCCATTGTCATTGACCAACAATATTGTCCCAACCATTCTTGCAAAACACATGAGGCATCGAATGTGAAGCTGAGTGAGATAAAGATGAGAAACATAAGTGGGAGTTACAACTCAGAGTTTGCAGTAAATTTGCAGTGCAGCTCAGGGAAGGCTTGTGAGAAAATTGAGCTTTCTTACATAAATCTCACTGCCACTCAGCCACCTGATCAAAACCACCAAATTGGGCGATTCAACTGCAACGGTGCCCTCCATGCCTTCACTATTCTTAATTCTACATTT

Coding sequence (CDS)

ATGACATCTCTTTCCTTTCTTCTTACCTTGCTATTACTAGCATTGGTTGCTGTCAACGCCGACCCGCCCCCGATCCCGCACACGCCGGACCCTTTTAAGAACGTCCATTTAGGGAAGGATATTAAACACCGGAACAACGAAGTTGTGTTTAATGTGCTGAATTACGGTGCCAAGGCCGATGGCAAGACGGATAGTTCTATGAATTTAATAAGGACATGGGTTGCAGCATGTCATTCCAAGGGAGCGGCAAGAGTTGTGATTCCTAGTGGTACTTTCTTCATCAATCAAGTTGTATTTGCAGGGCCATGTACCTGTCTGAGTCCGATCATTGTTCAGATCGACGCGGTCTTGAAAGGTGGTACCGATTTAAGTGAATTCGTCTCCGATGAATGGATATTGTTTGAGAAGATCAACGGCTTGATAGTCACTGGTAGAGGTACTTTGGATGGACAAGGTGGTTCTGTTTGGAAATACAACGACTGCGGTATGAATCCTGATTGCACGAAGCTTGCTGTTAATTTGAAACTCAATGGCATCACTCATGGACTTGTGAAAGGCATCACTTCCACCAACAGCAAGGGGTTTCACATGTTCATCACAAATAGCCAAGGCGTTAGGGTGCGAAGAATGCACATTACGGCGCCAGAAGACAGCCCCAACACCGATGGCATACATCTCAGCCGCTCCAACAATGTGAAGATATCAAGATCAGTCATTGCCACCGGTGACGACTGCATCTCCATCGGTCGAGGATCGACGAATGTCGTCATCAACAAAGTAACCTGCGGTCCTGGACACGGTATCAGTGTGGGGAGCCTAGGGAGGTACCAAAATGAGATGGATGTGGTGGGAATAAGAGTGGAGAATTGTTCCATAAATGGCACTACAAATGGAGTGAGGATAAAGACATGGCCAGGACAGCATTCAAGCATAGCTACCAATTTGACATTTCAAAACATTGTCATGTCCAATGTCTCAAACCCCATTGTCATTGACCAACAATATTGTCCCAACCATTCTTGCAAAACACATGAGGCATCGAATGTGAAGCTGAGTGAGATAAAGATGAGAAACATAAGTGGGAGTTACAACTCAGAGTTTGCAGTAAATTTGCAGTGCAGCTCAGGGAAGGCTTGTGAGAAAATTGAGCTTTCTTACATAAATCTCACTGCCACTCAGCCACCTGATCAAAACCACCAAATTGGGCGATTCAACTGCAACGGTGCCCTCCATGCCTTCACTATTCTTAATTCTACATTT

Protein sequence

MTSLSFLLTLLLLALVAVNADPPPIPHTPDPFKNVHLGKDIKHRNNEVVFNVLNYGAKADGKTDSSMNLIRTWVAACHSKGAARVVIPSGTFFINQVVFAGPCTCLSPIIVQIDAVLKGGTDLSEFVSDEWILFEKINGLIVTGRGTLDGQGGSVWKYNDCGMNPDCTKLAVNLKLNGITHGLVKGITSTNSKGFHMFITNSQGVRVRRMHITAPEDSPNTDGIHLSRSNNVKISRSVIATGDDCISIGRGSTNVVINKVTCGPGHGISVGSLGRYQNEMDVVGIRVENCSINGTTNGVRIKTWPGQHSSIATNLTFQNIVMSNVSNPIVIDQQYCPNHSCKTHEASNVKLSEIKMRNISGSYNSEFAVNLQCSSGKACEKIELSYINLTATQPPDQNHQIGRFNCNGALHAFTILNSTF

Homology

[Close]

BLAST of MS014640.1 vs. NCBI nr
Match: XP_022138171.1 (exopolygalacturonase-like [Momordica charantia])

HSP 1 Score: 663.7 bits (1711), Expect = 1.1e-186
Identity = 331/398 (83.17%), Postives = 352/398 (88.44%), Query Frame = 0


Query: 1   MTSLSFLLTLLLLALVAVNADPPPIPHTPDPFKNVHLGKDIKHRNNEVVFNVLNYGAKAD 60
           MTSLSFLLTLLLLALVAVNADPPPIPHTPDPFKNVHLGKDIKHRNNEVVFNVLNYGAKAD
Sbjct: 1   MTSLSFLLTLLLLALVAVNADPPPIPHTPDPFKNVHLGKDIKHRNNEVVFNVLNYGAKAD 60

Query: 61  GKTDSSMNLIRTWVAACHSKGAARVVIPSGTFFINQVVFAGPCTCLSPIIVQIDAVLKGG 120
           GKTDSSMNLIRTWVAACHSKGAARVVIPSGTFFINQVVFAGPCTCLSPIIVQIDAVLKGG
Sbjct: 61  GKTDSSMNLIRTWVAACHSKGAARVVIPSGTFFINQVVFAGPCTCLSPIIVQIDAVLKGG 120

Query: 121 TDLSEFVSDEWILFEKINGLIVTGRGTLDGQGGSVWKYNDCGMNPDCTKLAVNLKLNGIT 180
           TDLSEFVSDEWILFEKINGLIVTGRGTLDGQGGSVWKYNDCGMNPDCTKLAVNLKLNGIT
Sbjct: 121 TDLSEFVSDEWILFEKINGLIVTGRGTLDGQGGSVWKYNDCGMNPDCTKLAVNLKLNGIT 180

Query: 181 HGLVKGITSTNSKGFHMFITNSQGVRVRRMHITAPEDSPNTDGIHLSRSNNVKISRSVIA 240
           HGLVKGITSTNSKGFHMFITNSQGVRVRRMHITAPEDSPNTDGIHLSRSNNVKISRSVIA
Sbjct: 181 HGLVKGITSTNSKGFHMFITNSQGVRVRRMHITAPEDSPNTDGIHLSRSNNVKISRSVIA 240

Query: 241 TGDDCISIGRGSTNVVINKVTCGPGHGISVGSLGRYQNEMDVVGIRVENCSINGTTNGVR 300
           TGDDCISIGRGSTNVVINKVTCGPGHGIS+GSLG+YQ+E DV G+ V NC++  T NG+R
Sbjct: 241 TGDDCISIGRGSTNVVINKVTCGPGHGISIGSLGKYQDEEDVRGVTVRNCTLLSTDNGLR 300

Query: 301 IKTWPGQHSSIATNLTFQNIVMSNVSNPIVIDQQYCPNHSCKTHEASNVKLSEIKMRNIS 360
           IKTWP    S A+ + FQ+I M NV NPI+IDQ+Y  + +CK    S VK+S++   N+ 
Sbjct: 301 IKTWPDSPPSAASGIIFQDINMLNVKNPILIDQEYSCSTTCK-KPPSRVKISDVHFINVQ 360

Query: 361 GSYNSEFAVNLQCSSGKACEKIELSYINLTATQPPDQN 399
           GS  S  AVN +CS    C+ IE+  INL  T PP  N
Sbjct: 361 GSSISPVAVNFKCSKQFPCQNIEMLNINLKYTGPPKAN 397

[Close]

BLAST of MS014640.1 vs. NCBI nr
Match: XP_038877778.1 (exopolygalacturonase-like [Benincasa hispida])

HSP 1 Score: 543.5 bits (1399), Expect = 1.6e-150
Identity = 267/391 (68.29%), Postives = 319/391 (81.59%), Query Frame = 0


Query: 8   LTLLLLALVAVNADPPPIPHTPDPFKNVHLGKDIKHRNNEVVFNVLNYGAKADGKTDSSM 67
           LTLLL+ALVAV A P   P  P+P +NV+LGKDI+HR  E VFNVL++GAK DGKTD++ 
Sbjct: 11  LTLLLVALVAVEAKPLAGPILPNPLQNVNLGKDIRHR-KEAVFNVLSFGAKPDGKTDNTQ 70

Query: 68  NLIRTWVAACHSKGAARVVIPSGTFFINQVVFAGPCTCLSPIIVQIDAVLKGGTDLSEFV 127
           + ++TW+AACHSKGAARVVIPSGTF INQV FAGPCT +SPIIVQIDA+LKGGTD+S +V
Sbjct: 71  SFMKTWIAACHSKGAARVVIPSGTFLINQVAFAGPCTSISPIIVQIDAMLKGGTDVSNYV 130

Query: 128 SDEWILFEKINGLIVTGRGTLDGQGGSVWKYNDCGMNPDCTKLAVNLKLNGITHGLVKGI 187
           SDEWILFEKINGLIVTGRGTLDGQGG+VW+YNDCGMNP+C KL VNLKLNGITHGLVKGI
Sbjct: 131 SDEWILFEKINGLIVTGRGTLDGQGGAVWQYNDCGMNPNCQKLPVNLKLNGITHGLVKGI 190

Query: 188 TSTNSKGFHMFITNSQGVRVRRMHITAPEDSPNTDGIHLSRSNNVKISRSVIATGDDCIS 247
           +S NSKGFHMFITN + +R+R++HITAP DSPNTDGIH SRSNNVKISRSVIATGDDCIS
Sbjct: 191 SSINSKGFHMFITNCENLRLRKLHITAPVDSPNTDGIHTSRSNNVKISRSVIATGDDCIS 250

Query: 248 IGRGSTNVVINKVTCGPGHGISVGSLGRYQNEMDVVGIRVENCSINGTTNGVRIKTWPGQ 307
           +GRGS N+ INK+TCGPGHGIS+GSLG+Y NE DV GI V+NC++  T NG+RIKTWP  
Sbjct: 251 LGRGSMNIAINKITCGPGHGISIGSLGKYPNEEDVRGIIVKNCTLTNTDNGLRIKTWPDS 310

Query: 308 HSSIATNLTFQNIVMSNVSNPIVIDQQY-CPNHSCKTHEASNVKLSEIKMRNISGSYNSE 367
             S A+ + FQ+I M NV NPI+IDQ+Y C   +C+    S VK+S++   N+ GS  S 
Sbjct: 311 PPSAASGILFQDINMINVKNPIIIDQEYSCSKTNCQ-KPPSRVKISDVHYINVKGSSISP 370

Query: 368 FAVNLQCSSGKACEKIELSYINLTATQPPDQ 398
            AV L+CS    C+ IE+  INL  + PP++
Sbjct: 371 VAVRLKCSKQFPCQNIEMFNINLKYSGPPNK 399

[Close]

BLAST of MS014640.1 vs. NCBI nr
Match: XP_008438909.1 (PREDICTED: exopolygalacturonase-like [Cucumis melo] >KAA0049517.1 exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK16197.1 exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 539.7 bits (1389), Expect = 2.3e-149
Identity = 269/392 (68.62%), Postives = 318/392 (81.12%), Query Frame = 0


Query: 7   LLTLLLLALVAVNADPPPIPHTPDPFKNVHLGKDIKHRNNEVVFNVLNYGAKADGKTDSS 66
           LLTLLL+ALVAV+A   P P  PDPF+NV+LGKDIKHR  E VFNVL++GAK DGKTD++
Sbjct: 10  LLTLLLVALVAVDAKLLPGPILPDPFRNVNLGKDIKHR-KETVFNVLSFGAKPDGKTDNT 69

Query: 67  MNLIRTWVAACHSKGAARVVIPSGTFFINQVVFAGPCTCLSPIIVQIDAVLKGGTDLSEF 126
            + ++TWVAACHSKGAARVVIPSGTF INQV FAGPC   SPI+VQIDA LKGG D+S +
Sbjct: 70  ESFMKTWVAACHSKGAARVVIPSGTFLINQVAFAGPCASTSPIVVQIDATLKGGIDISNY 129

Query: 127 VSDEWILFEKINGLIVTGRGTLDGQGGSVWKYNDCGMNPDCTKLAVNLKLNGITHGLVKG 186
            SDEWILFEKINGLIVTGRGTLDGQG +VW+YNDCGMNP+C KL VNLKL+GITHGLVKG
Sbjct: 130 FSDEWILFEKINGLIVTGRGTLDGQGSAVWEYNDCGMNPNCQKLPVNLKLSGITHGLVKG 189

Query: 187 ITSTNSKGFHMFITNSQGVRVRRMHITAPEDSPNTDGIHLSRSNNVKISRSVIATGDDCI 246
           I+S NSKGFHMFITN + VR+R++HITAPE SPNTDGIH+SRSNNVKISRSVIATGDDCI
Sbjct: 190 ISSVNSKGFHMFITNCENVRLRKLHITAPETSPNTDGIHVSRSNNVKISRSVIATGDDCI 249

Query: 247 SIGRGSTNVVINKVTCGPGHGISVGSLGRYQNEMDVVGIRVENCSINGTTNGVRIKTWPG 306
           S+GRGS N+ INK+TCGPGHGISVGSLG+YQNE DV GI V+NC++  T NG+RIKTWP 
Sbjct: 250 SLGRGSMNIAINKITCGPGHGISVGSLGKYQNEEDVRGIIVKNCTLVKTDNGLRIKTWPD 309

Query: 307 QHSSIATNLTFQNIVMSNVSNPIVIDQQY-CPNHSCKTHEASNVKLSEIKMRNISGSYNS 366
              S A+ + FQ+I M +V NPI+IDQ+Y C   +C+    S VK+S++   N+ GS  S
Sbjct: 310 SPPSAASGILFQDINMIDVKNPILIDQEYSCSKTNCQ-KPPSRVKISDVHYINVKGSSIS 369

Query: 367 EFAVNLQCSSGKACEKIELSYINLTATQPPDQ 398
             AV L+CS    C+ IE+  INL  T PP++
Sbjct: 370 PVAVQLKCSKQFPCQNIEMFNINLKYTGPPNK 399

[Close]

BLAST of MS014640.1 vs. NCBI nr
Match: XP_004134494.1 (exopolygalacturonase [Cucumis sativus])

HSP 1 Score: 535.0 bits (1377), Expect = 5.7e-148
Identity = 266/392 (67.86%), Postives = 314/392 (80.10%), Query Frame = 0


Query: 7   LLTLLLLALVAVNADPPPIPHTPDPFKNVHLGKDIKHRNNEVVFNVLNYGAKADGKTDSS 66
           LLTLLL+ALVAV+A     P +PDPF NV+LGKDIKHR  E VFNVL++GAK DGKTD+S
Sbjct: 10  LLTLLLVALVAVDAKLLAGPISPDPFLNVNLGKDIKHR-KETVFNVLSFGAKPDGKTDNS 69

Query: 67  MNLIRTWVAACHSKGAARVVIPSGTFFINQVVFAGPCTCLSPIIVQIDAVLKGGTDLSEF 126
            + ++TWVAACHSKGAARVVIP GTF INQ+ FAGPC   SPIIVQIDA LKGG D+S +
Sbjct: 70  ESFMKTWVAACHSKGAARVVIPRGTFLINQIAFAGPCASTSPIIVQIDATLKGGVDISNY 129

Query: 127 VSDEWILFEKINGLIVTGRGTLDGQGGSVWKYNDCGMNPDCTKLAVNLKLNGITHGLVKG 186
            SDEWILFEKINGLIVTGRG LDGQG +VW+YNDCGMNP+C KL VNLKLN ITHGLVKG
Sbjct: 130 FSDEWILFEKINGLIVTGRGALDGQGSAVWEYNDCGMNPNCQKLPVNLKLNNITHGLVKG 189

Query: 187 ITSTNSKGFHMFITNSQGVRVRRMHITAPEDSPNTDGIHLSRSNNVKISRSVIATGDDCI 246
           I+S NSKGFHMF+TN + VR+R++H+TAPEDSPNTDGIHLSRSNN+KISRSVIATGDDCI
Sbjct: 190 ISSVNSKGFHMFVTNCENVRLRKLHLTAPEDSPNTDGIHLSRSNNIKISRSVIATGDDCI 249

Query: 247 SIGRGSTNVVINKVTCGPGHGISVGSLGRYQNEMDVVGIRVENCSINGTTNGVRIKTWPG 306
           S+GRGS NV INK+TCGPGHGISVGSLG+Y NE DV GI V+NC++  T NG+RIKTWP 
Sbjct: 250 SLGRGSMNVAINKITCGPGHGISVGSLGKYPNEEDVRGIVVKNCTLLSTDNGLRIKTWPD 309

Query: 307 QHSSIATNLTFQNIVMSNVSNPIVIDQQY-CPNHSCKTHEASNVKLSEIKMRNISGSYNS 366
              S A+ + FQ+I M NV NPI+IDQ+Y C   +C+    S VK+S++   N+ GS  S
Sbjct: 310 SPPSAASGILFQDINMVNVKNPILIDQEYSCSKTNCQ-RPPSRVKISDVHYINVKGSSIS 369

Query: 367 EFAVNLQCSSGKACEKIELSYINLTATQPPDQ 398
             AV L+CS    C+ IE+  INL  + PP++
Sbjct: 370 PVAVQLKCSKQFPCQNIEMFNINLKYSGPPNK 399

[Close]

BLAST of MS014640.1 vs. NCBI nr
Match: XP_022980001.1 (exopolygalacturonase-like [Cucurbita maxima])

HSP 1 Score: 509.6 bits (1311), Expect = 2.6e-140
Identity = 252/395 (63.80%), Postives = 310/395 (78.48%), Query Frame = 0


Query: 5   SFLLTLLLLALVAVNADPPPIPHTPDPFKNVHLGKDIKHRNNEVVFNVLNYGAKADGKTD 64
           + L  LLL+ LVAVNA      + PD F+ ++ GKDI+HR  E VFNVL++GAK DGK D
Sbjct: 9   TLLTWLLLVELVAVNAKFFVGTNPPDLFQKINFGKDIRHR-KETVFNVLSFGAKPDGKKD 68

Query: 65  SSMNLIRTWVAACHSKGAARVVIPSGTFFINQVVFAGPCTCLSPIIVQIDAVLKGGTDLS 124
           ++ + ++TWVAACHSKGAARVVIP GTF INQ+VFAGPC   SPI+VQIDA LKGG DLS
Sbjct: 69  NTQSFMKTWVAACHSKGAARVVIPGGTFLINQIVFAGPCASTSPIVVQIDATLKGGIDLS 128

Query: 125 EFVSDEWILFEKINGLIVTGRGTLDGQGGSVWKYNDCGMNPDCTKLAVNLKLNGITHGLV 184
            +VS+EWILFEKINGLI+TGRGTLDGQG +VWKYNDCGMNP C KL VNLK NGIT+  +
Sbjct: 129 NYVSNEWILFEKINGLIITGRGTLDGQGDAVWKYNDCGMNPTCQKLPVNLKFNGITNVFM 188

Query: 185 KGITSTNSKGFHMFITNSQGVRVRRMHITAPEDSPNTDGIHLSRSNNVKISRSVIATGDD 244
           KGI+S NSKGFHMFITNS+ VR++++HITAP+DSPNTDGIHLSRSN VKISRSVI+TGDD
Sbjct: 189 KGISSINSKGFHMFITNSENVRLKKLHITAPDDSPNTDGIHLSRSNKVKISRSVISTGDD 248

Query: 245 CISIGRGSTNVVINKVTCGPGHGISVGSLGRYQNEMDVVGIRVENCSINGTTNGVRIKTW 304
           CIS+GRGS NV INK+TCGPGHGISVGSLG+Y NE DV+G+ ++NC++  T NG+RIKTW
Sbjct: 249 CISLGRGSMNVTINKITCGPGHGISVGSLGKYDNEEDVLGVVIKNCTLIKTDNGLRIKTW 308

Query: 305 PGQHSSIATNLTFQNIVMSNVSNPIVIDQQY-CPNHSCKTHEASNVKLSEIKMRNISGSY 364
           P    S A+ + FQ+I M +V NPI+IDQ+Y C   +C+    S VK+S++   N+ GS 
Sbjct: 309 PDSPPSAASGILFQDINMIDVKNPILIDQEYSCSKTNCQ-RPPSRVKISDVHFINVKGST 368

Query: 365 NSEFAVNLQCSSGKACEKIELSYINLTATQPPDQN 399
            S  AV+L+CS    C+ IEL  INL  + PP ++
Sbjct: 369 ISSVAVHLKCSKRFPCQNIELFNINLKYSGPPKKS 401

[Close]

BLAST of MS014640.1 vs. ExPASy Swiss-Prot
Match: Q6H9K0 (Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 1.7e-91
Identity = 165/342 (48.25%), Postives = 223/342 (65.20%), Query Frame = 0


Query: 49  VFNVLNYGAKADGKTDSSMNLIRTWVAACHSKGAARVVIPSGTFFINQVVFAGPCTCLSP 108
           VFNV +YGAK  G  D S  +++ W AAC S+G + V+IP G + + +V   GPC   S 
Sbjct: 9   VFNVNDYGAKGAG--DISQAVMKAWKAACASQGPSTVLIPKGNYNMGEVAMQGPCKG-SK 68

Query: 109 IIVQIDAVLKGGTDLSEFVSDEWILFEKINGLIVTGRGTLDGQGGSVWKYNDCGMNPDCT 168
           I  QID V+K   D S+F SD W+ F +I+GL V+G GTLDGQG + W  N+C  NP+C 
Sbjct: 69  IGFQIDGVVKAPADPSKFKSDGWVSFYRIDGLTVSGTGTLDGQGQTAWAKNNCDKNPNCK 128

Query: 169 KLAVNLKLNGITHGLVKGITSTNSKGFHMFITNSQGVRVRRMHITAPEDSPNTDGIHLSR 228
             A+NL+ + + H +V+ ITS NSK FH+ +   + +  + + +TAP  S NTDGIH+  
Sbjct: 129 HAAMNLRFDFLKHAMVRDITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGIHVGI 188

Query: 229 SNNVKISRSVIATGDDCISIGRGSTNVVINKVTCGPGHGISVGSLGRYQNEMDVVGIRVE 288
           S  V I+ + IATGDDCISIG GS NV I +V CGPGHGIS+GSLGRY NE +V GI V+
Sbjct: 189 SKGVTITNTKIATGDDCISIGPGSQNVTITQVNCGPGHGISIGSLGRYNNEKEVRGITVK 248

Query: 289 NCSINGTTNGVRIKTWPGQHSSIATNLTFQNIVMSNVSNPIVIDQQYCPNHSCKTHEASN 348
            C+ +GT NGVR+KTWP      AT+LTFQ++ M+NV NP+++DQ+YCP   C     S 
Sbjct: 249 GCTFSGTMNGVRVKTWPNSPPGAATDLTFQDLTMNNVQNPVILDQEYCPYGQCSRQAPSR 308

Query: 349 VKLSEIKMRNISGSYNSEFAVNLQCSSGKACEKIELSYINLT 391
           +KLS I   NI G+   + AV + CS G  C  +++  INL+
Sbjct: 309 IKLSNINFNNIRGTSTGKVAVVIACSHGMPCSNMKIGEINLS 347

[Close]

BLAST of MS014640.1 vs. ExPASy Swiss-Prot
Match: Q39766 (Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 2.7e-84
Identity = 150/338 (44.38%), Postives = 215/338 (63.61%), Query Frame = 0


Query: 52  VLNYGAKADGKTDSSMNLIRTWVAACHSKGAARVVIPSGTFFINQVVFAGPCTCLSPIIV 111
           V  +GAKADGKTD S   +  W  AC S   + VVIP GT+ +++V   GPC   +PI +
Sbjct: 32  VAKFGAKADGKTDLSKPFLDAWKEACASVTPSTVVIPKGTYLLSKVNLEGPCK--APIEI 91

Query: 112 QIDAVLKGGTDLSEFVSDEWILFEKINGLIVTGRGTLDGQGGSVWKYNDCGMNPDCTKLA 171
            +   ++   D S F    W+ F  +    + G G  DGQG   ++ N C      +KL 
Sbjct: 92  NVQGTIQAPADPSAFKDPNWVRFYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSKLP 151

Query: 172 VNLKLNGITHGLVKGITSTNSKGFHMFITNSQGVRVRRMHITAPEDSPNTDGIHLSRSNN 231
           VN++ + +T+ L++ ITS +SK FH+ +   + + + R+ I AP++SPNTDGIH+ +S  
Sbjct: 152 VNIRFDFVTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEG 211

Query: 232 VKISRSVIATGDDCISIGRGSTNVVINKVTCGPGHGISVGSLGRYQNEMDVVGIRVENCS 291
           V I  S I TGDDCISIG G+ N+VI ++TCGPGHGIS+GSLG++QNE  V GI++ NC+
Sbjct: 212 VNIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCT 271

Query: 292 INGTTNGVRIKTWPGQHSSIATNLTFQNIVMSNVSNPIVIDQQYCPNHSCKTHEASNVKL 351
           I  T+NG RIKTWPG+H    + + F++I M+NVS+PI+IDQQYCP + CK +E S VKL
Sbjct: 272 ITNTSNGARIKTWPGEHGGAVSEIHFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKL 331

Query: 352 SEIKMRNISGSYNSEFAVNLQCSSGKACEKIELSYINL 390
           S I  +NI G+     A+   CS    C+ +EL+ I++
Sbjct: 332 SNISFKNIRGTSALPEAIKFICSGSSPCQNVELADIDI 367

[Close]

BLAST of MS014640.1 vs. ExPASy Swiss-Prot
Match: Q39786 (Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 3.5e-84
Identity = 150/338 (44.38%), Postives = 215/338 (63.61%), Query Frame = 0


Query: 52  VLNYGAKADGKTDSSMNLIRTWVAACHSKGAARVVIPSGTFFINQVVFAGPCTCLSPIIV 111
           V  +GAKADGKTD S   +  W  AC S   + VVIP GT+ +++V   GPC   +PI +
Sbjct: 32  VAKFGAKADGKTDLSKPFLDAWKEACASVTPSTVVIPKGTYLLSKVNLEGPCK--APIEI 91

Query: 112 QIDAVLKGGTDLSEFVSDEWILFEKINGLIVTGRGTLDGQGGSVWKYNDCGMNPDCTKLA 171
            +   ++   D S F    W+ F  +    + G G  DGQG   ++ N C      +KL 
Sbjct: 92  NVQGTIQAPADPSAFKDPNWVRFYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSKLP 151

Query: 172 VNLKLNGITHGLVKGITSTNSKGFHMFITNSQGVRVRRMHITAPEDSPNTDGIHLSRSNN 231
           VN++ + +T+ L++ ITS +SK FH+ +   + + + R+ I AP++SPNTDGIH+ +S  
Sbjct: 152 VNIRFDFLTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEG 211

Query: 232 VKISRSVIATGDDCISIGRGSTNVVINKVTCGPGHGISVGSLGRYQNEMDVVGIRVENCS 291
           V I  S I TGDDCISIG G+ N+VI ++TCGPGHGIS+GSLG++QNE  V GI++ NC+
Sbjct: 212 VNIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCT 271

Query: 292 INGTTNGVRIKTWPGQHSSIATNLTFQNIVMSNVSNPIVIDQQYCPNHSCKTHEASNVKL 351
           I  T+NG RIKTWPG+H    + + F++I M+NVS+PI+IDQQYCP + CK +E S VKL
Sbjct: 272 ITNTSNGARIKTWPGEHGGAVSEIHFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKL 331

Query: 352 SEIKMRNISGSYNSEFAVNLQCSSGKACEKIELSYINL 390
           S I  +NI G+     A+   CS    C+ +EL+ I++
Sbjct: 332 SNISFKNIRGTSALPEAIKFICSGSSPCQNVELADIDI 367

[Close]

BLAST of MS014640.1 vs. ExPASy Swiss-Prot
Match: P49062 (Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana OX=3702 GN=PGA3 PE=2 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 7.4e-82
Identity = 146/344 (42.44%), Postives = 214/344 (62.21%), Query Frame = 0


Query: 46  NEVVFNVLNYGAKADGKTDSSMNLIRTWVAACHSKGAARVVIPSGTFFINQVVFAGPCTC 105
           N  V+++  +GA  DG T++    + TW+  C S   A +++P GTF    V+FAGPC  
Sbjct: 48  NPTVYDITKFGAVGDGSTNTFKAFLNTWIQVCDSPVPATLLVPKGTFLAGPVIFAGPCK- 107

Query: 106 LSPIIVQIDAVLKGGTDLSEFVSDEWILFEKINGLIVTGRGTLDGQGGSVWKYNDCGMNP 165
            S + V +   +   T  S + + EW LFE+++ L++TG GT  G+G +VWK + CG   
Sbjct: 108 -SKVTVNVIGTIIATT--SGYATPEWFLFERVDNLVLTGTGTFHGKGEAVWKADGCGKKV 167

Query: 166 DCTKLAVNLKLNGITHGLVKGITSTNSKGFHMFITNSQGVRVRRMHITAPEDSPNTDGIH 225
            C     +LK   + +  + GI+S N+K FHMF+  ++ V ++ + +TAP +SPNTDGIH
Sbjct: 168 QCNLPPTSLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIH 227

Query: 226 LSRSNNVKISRSVIATGDDCISIGRGSTNVVINKVTCGPGHGISVGSLGRYQNEMDVVGI 285
           LS ++NV I  S IATGDDC+S+GRGS NV + +V CGPGHG+SVGSLG+Y+NE DV GI
Sbjct: 228 LSNADNVSILDSTIATGDDCVSVGRGSNNVTVERVICGPGHGLSVGSLGKYKNEEDVSGI 287

Query: 286 RVENCSINGTTNGVRIKTWPGQHSSIATNLTFQNIVMSNVSNPIVIDQQYCPNHSCKTHE 345
            V NC++  T NG+RIKTW G   S A ++ F+NI+M +V NPI+IDQ Y          
Sbjct: 288 HVNNCTMIETDNGLRIKTWGGSDPSKAVDIKFENIIMQSVKNPIIIDQNYGSRGG----- 347

Query: 346 ASNVKLSEIKMRNISGSYNSEFAVNLQCSSGKACEKIELSYINL 390
            S V +S+I  +NI G+  ++  V + CS    C+ + +  +NL
Sbjct: 348 DSQVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNL 382

[Close]

BLAST of MS014640.1 vs. ExPASy Swiss-Prot
Match: P35337 (Polygalacturonase OS=Brassica napus OX=3708 PE=2 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 6.9e-80
Identity = 146/355 (41.13%), Postives = 220/355 (61.97%), Query Frame = 0


Query: 48  VVFNVLNYGAKAD-------GKTDSSMNLIRTWVAACHSKGAARVVIPSGTFFINQVVFA 107
           +V  +L Y A A+         +D +  +++ + +AC +   ++V+IP G F + + V  
Sbjct: 11  LVLCLLGYSANAEVFTAGGPPNSDITAAVLKAFTSACQAPAPSQVLIPKGDFKLGETVMT 70

Query: 108 GPCTCLSPIIVQIDAVLKGGTDLSEFVSDEWILFEKINGLIVTGRGTLDGQGGSVWKYND 167
           GPC       +Q +    GG+   +   D W++FEKING  + G GT DG+G + WK N+
Sbjct: 71  GPCKSPIEFTLQGNVKTDGGSTQGK---DRWVVFEKINGFKLNGGGTFDGEGNAAWKANN 130

Query: 168 CGMNPDCTKLAVNLKLNGITHGLVKGITSTNSKGFHMFITNSQGVRVRRMHITAPEDSPN 227
           C    +C KL ++++ + + +  +K +TS ++K FH  + + + +    + I AP +SPN
Sbjct: 131 CHKTFECKKLPISVRFDFVDNAEIKDVTSLDAKNFHFNVISGKNMTFDNIKIIAPAESPN 190

Query: 228 TDGIHLSRSNNVKISRSVIATGDDCISIGRGSTNVVINKVTCGPGHGISVGSLGRYQNEM 287
           TDGIHL R   VKI  + IATGDDCIS+G G  N++I KV CGPGHGISVGSLGRY  E 
Sbjct: 191 TDGIHLGRCEGVKILNTKIATGDDCISVGDGMKNLLIEKVVCGPGHGISVGSLGRYGWEQ 250

Query: 288 DVVGIRVENCSINGTTNGVRIKTWPGQH-SSIATNLTFQNIVMSNVSNPIVIDQQYCPNH 347
           DV  I V+NC++ GT+NG+RIKTWP    ++ A  + F++I+++ VSNPI+IDQ+YCP +
Sbjct: 251 DVTDITVKNCTLEGTSNGLRIKTWPSAACTTTAAGIHFEDIILNKVSNPILIDQEYCPWN 310

Query: 348 SCKTHEASNVKLSEIKMRNISGSYNSEFAVNLQCSSGKACEKIELSYINLTATQP 395
            C  ++ S +KL +I  RNI G+  ++ AV L CS G  CE +E+  IN+  T P
Sbjct: 311 QCNKNKPSTIKLVDITFRNIRGTSENKDAVKLLCSKGHPCENVEIGDINIEYTGP 362

[Close]

BLAST of MS014640.1 vs. ExPASy TrEMBL
Match: A0A6J1C8Y3 (exopolygalacturonase-like OS=Momordica charantia OX=3673 GN=LOC111009407 PE=3 SV=1)

HSP 1 Score: 663.7 bits (1711), Expect = 5.1e-187
Identity = 331/398 (83.17%), Postives = 352/398 (88.44%), Query Frame = 0


Query: 1   MTSLSFLLTLLLLALVAVNADPPPIPHTPDPFKNVHLGKDIKHRNNEVVFNVLNYGAKAD 60
           MTSLSFLLTLLLLALVAVNADPPPIPHTPDPFKNVHLGKDIKHRNNEVVFNVLNYGAKAD
Sbjct: 1   MTSLSFLLTLLLLALVAVNADPPPIPHTPDPFKNVHLGKDIKHRNNEVVFNVLNYGAKAD 60

Query: 61  GKTDSSMNLIRTWVAACHSKGAARVVIPSGTFFINQVVFAGPCTCLSPIIVQIDAVLKGG 120
           GKTDSSMNLIRTWVAACHSKGAARVVIPSGTFFINQVVFAGPCTCLSPIIVQIDAVLKGG
Sbjct: 61  GKTDSSMNLIRTWVAACHSKGAARVVIPSGTFFINQVVFAGPCTCLSPIIVQIDAVLKGG 120

Query: 121 TDLSEFVSDEWILFEKINGLIVTGRGTLDGQGGSVWKYNDCGMNPDCTKLAVNLKLNGIT 180
           TDLSEFVSDEWILFEKINGLIVTGRGTLDGQGGSVWKYNDCGMNPDCTKLAVNLKLNGIT
Sbjct: 121 TDLSEFVSDEWILFEKINGLIVTGRGTLDGQGGSVWKYNDCGMNPDCTKLAVNLKLNGIT 180

Query: 181 HGLVKGITSTNSKGFHMFITNSQGVRVRRMHITAPEDSPNTDGIHLSRSNNVKISRSVIA 240
           HGLVKGITSTNSKGFHMFITNSQGVRVRRMHITAPEDSPNTDGIHLSRSNNVKISRSVIA
Sbjct: 181 HGLVKGITSTNSKGFHMFITNSQGVRVRRMHITAPEDSPNTDGIHLSRSNNVKISRSVIA 240

Query: 241 TGDDCISIGRGSTNVVINKVTCGPGHGISVGSLGRYQNEMDVVGIRVENCSINGTTNGVR 300
           TGDDCISIGRGSTNVVINKVTCGPGHGIS+GSLG+YQ+E DV G+ V NC++  T NG+R
Sbjct: 241 TGDDCISIGRGSTNVVINKVTCGPGHGISIGSLGKYQDEEDVRGVTVRNCTLLSTDNGLR 300

Query: 301 IKTWPGQHSSIATNLTFQNIVMSNVSNPIVIDQQYCPNHSCKTHEASNVKLSEIKMRNIS 360
           IKTWP    S A+ + FQ+I M NV NPI+IDQ+Y  + +CK    S VK+S++   N+ 
Sbjct: 301 IKTWPDSPPSAASGIIFQDINMLNVKNPILIDQEYSCSTTCK-KPPSRVKISDVHFINVQ 360

Query: 361 GSYNSEFAVNLQCSSGKACEKIELSYINLTATQPPDQN 399
           GS  S  AVN +CS    C+ IE+  INL  T PP  N
Sbjct: 361 GSSISPVAVNFKCSKQFPCQNIEMLNINLKYTGPPKAN 397

[Close]

BLAST of MS014640.1 vs. ExPASy TrEMBL
Match: A0A5D3CWB7 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001250 PE=3 SV=1)

HSP 1 Score: 539.7 bits (1389), Expect = 1.1e-149
Identity = 269/392 (68.62%), Postives = 318/392 (81.12%), Query Frame = 0


Query: 7   LLTLLLLALVAVNADPPPIPHTPDPFKNVHLGKDIKHRNNEVVFNVLNYGAKADGKTDSS 66
           LLTLLL+ALVAV+A   P P  PDPF+NV+LGKDIKHR  E VFNVL++GAK DGKTD++
Sbjct: 10  LLTLLLVALVAVDAKLLPGPILPDPFRNVNLGKDIKHR-KETVFNVLSFGAKPDGKTDNT 69

Query: 67  MNLIRTWVAACHSKGAARVVIPSGTFFINQVVFAGPCTCLSPIIVQIDAVLKGGTDLSEF 126
            + ++TWVAACHSKGAARVVIPSGTF INQV FAGPC   SPI+VQIDA LKGG D+S +
Sbjct: 70  ESFMKTWVAACHSKGAARVVIPSGTFLINQVAFAGPCASTSPIVVQIDATLKGGIDISNY 129

Query: 127 VSDEWILFEKINGLIVTGRGTLDGQGGSVWKYNDCGMNPDCTKLAVNLKLNGITHGLVKG 186
            SDEWILFEKINGLIVTGRGTLDGQG +VW+YNDCGMNP+C KL VNLKL+GITHGLVKG
Sbjct: 130 FSDEWILFEKINGLIVTGRGTLDGQGSAVWEYNDCGMNPNCQKLPVNLKLSGITHGLVKG 189

Query: 187 ITSTNSKGFHMFITNSQGVRVRRMHITAPEDSPNTDGIHLSRSNNVKISRSVIATGDDCI 246
           I+S NSKGFHMFITN + VR+R++HITAPE SPNTDGIH+SRSNNVKISRSVIATGDDCI
Sbjct: 190 ISSVNSKGFHMFITNCENVRLRKLHITAPETSPNTDGIHVSRSNNVKISRSVIATGDDCI 249

Query: 247 SIGRGSTNVVINKVTCGPGHGISVGSLGRYQNEMDVVGIRVENCSINGTTNGVRIKTWPG 306
           S+GRGS N+ INK+TCGPGHGISVGSLG+YQNE DV GI V+NC++  T NG+RIKTWP 
Sbjct: 250 SLGRGSMNIAINKITCGPGHGISVGSLGKYQNEEDVRGIIVKNCTLVKTDNGLRIKTWPD 309

Query: 307 QHSSIATNLTFQNIVMSNVSNPIVIDQQY-CPNHSCKTHEASNVKLSEIKMRNISGSYNS 366
              S A+ + FQ+I M +V NPI+IDQ+Y C   +C+    S VK+S++   N+ GS  S
Sbjct: 310 SPPSAASGILFQDINMIDVKNPILIDQEYSCSKTNCQ-KPPSRVKISDVHYINVKGSSIS 369

Query: 367 EFAVNLQCSSGKACEKIELSYINLTATQPPDQ 398
             AV L+CS    C+ IE+  INL  T PP++
Sbjct: 370 PVAVQLKCSKQFPCQNIEMFNINLKYTGPPNK 399

[Close]

BLAST of MS014640.1 vs. ExPASy TrEMBL
Match: A0A1S3AXH3 (exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103483868 PE=3 SV=1)

HSP 1 Score: 539.7 bits (1389), Expect = 1.1e-149
Identity = 269/392 (68.62%), Postives = 318/392 (81.12%), Query Frame = 0


Query: 7   LLTLLLLALVAVNADPPPIPHTPDPFKNVHLGKDIKHRNNEVVFNVLNYGAKADGKTDSS 66
           LLTLLL+ALVAV+A   P P  PDPF+NV+LGKDIKHR  E VFNVL++GAK DGKTD++
Sbjct: 10  LLTLLLVALVAVDAKLLPGPILPDPFRNVNLGKDIKHR-KETVFNVLSFGAKPDGKTDNT 69

Query: 67  MNLIRTWVAACHSKGAARVVIPSGTFFINQVVFAGPCTCLSPIIVQIDAVLKGGTDLSEF 126
            + ++TWVAACHSKGAARVVIPSGTF INQV FAGPC   SPI+VQIDA LKGG D+S +
Sbjct: 70  ESFMKTWVAACHSKGAARVVIPSGTFLINQVAFAGPCASTSPIVVQIDATLKGGIDISNY 129

Query: 127 VSDEWILFEKINGLIVTGRGTLDGQGGSVWKYNDCGMNPDCTKLAVNLKLNGITHGLVKG 186
            SDEWILFEKINGLIVTGRGTLDGQG +VW+YNDCGMNP+C KL VNLKL+GITHGLVKG
Sbjct: 130 FSDEWILFEKINGLIVTGRGTLDGQGSAVWEYNDCGMNPNCQKLPVNLKLSGITHGLVKG 189

Query: 187 ITSTNSKGFHMFITNSQGVRVRRMHITAPEDSPNTDGIHLSRSNNVKISRSVIATGDDCI 246
           I+S NSKGFHMFITN + VR+R++HITAPE SPNTDGIH+SRSNNVKISRSVIATGDDCI
Sbjct: 190 ISSVNSKGFHMFITNCENVRLRKLHITAPETSPNTDGIHVSRSNNVKISRSVIATGDDCI 249

Query: 247 SIGRGSTNVVINKVTCGPGHGISVGSLGRYQNEMDVVGIRVENCSINGTTNGVRIKTWPG 306
           S+GRGS N+ INK+TCGPGHGISVGSLG+YQNE DV GI V+NC++  T NG+RIKTWP 
Sbjct: 250 SLGRGSMNIAINKITCGPGHGISVGSLGKYQNEEDVRGIIVKNCTLVKTDNGLRIKTWPD 309

Query: 307 QHSSIATNLTFQNIVMSNVSNPIVIDQQY-CPNHSCKTHEASNVKLSEIKMRNISGSYNS 366
              S A+ + FQ+I M +V NPI+IDQ+Y C   +C+    S VK+S++   N+ GS  S
Sbjct: 310 SPPSAASGILFQDINMIDVKNPILIDQEYSCSKTNCQ-KPPSRVKISDVHYINVKGSSIS 369

Query: 367 EFAVNLQCSSGKACEKIELSYINLTATQPPDQ 398
             AV L+CS    C+ IE+  INL  T PP++
Sbjct: 370 PVAVQLKCSKQFPCQNIEMFNINLKYTGPPNK 399

[Close]

BLAST of MS014640.1 vs. ExPASy TrEMBL
Match: A0A0A0LAM9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G164550 PE=3 SV=1)

HSP 1 Score: 535.0 bits (1377), Expect = 2.8e-148
Identity = 266/392 (67.86%), Postives = 314/392 (80.10%), Query Frame = 0


Query: 7   LLTLLLLALVAVNADPPPIPHTPDPFKNVHLGKDIKHRNNEVVFNVLNYGAKADGKTDSS 66
           LLTLLL+ALVAV+A     P +PDPF NV+LGKDIKHR  E VFNVL++GAK DGKTD+S
Sbjct: 10  LLTLLLVALVAVDAKLLAGPISPDPFLNVNLGKDIKHR-KETVFNVLSFGAKPDGKTDNS 69

Query: 67  MNLIRTWVAACHSKGAARVVIPSGTFFINQVVFAGPCTCLSPIIVQIDAVLKGGTDLSEF 126
            + ++TWVAACHSKGAARVVIP GTF INQ+ FAGPC   SPIIVQIDA LKGG D+S +
Sbjct: 70  ESFMKTWVAACHSKGAARVVIPRGTFLINQIAFAGPCASTSPIIVQIDATLKGGVDISNY 129

Query: 127 VSDEWILFEKINGLIVTGRGTLDGQGGSVWKYNDCGMNPDCTKLAVNLKLNGITHGLVKG 186
            SDEWILFEKINGLIVTGRG LDGQG +VW+YNDCGMNP+C KL VNLKLN ITHGLVKG
Sbjct: 130 FSDEWILFEKINGLIVTGRGALDGQGSAVWEYNDCGMNPNCQKLPVNLKLNNITHGLVKG 189

Query: 187 ITSTNSKGFHMFITNSQGVRVRRMHITAPEDSPNTDGIHLSRSNNVKISRSVIATGDDCI 246
           I+S NSKGFHMF+TN + VR+R++H+TAPEDSPNTDGIHLSRSNN+KISRSVIATGDDCI
Sbjct: 190 ISSVNSKGFHMFVTNCENVRLRKLHLTAPEDSPNTDGIHLSRSNNIKISRSVIATGDDCI 249

Query: 247 SIGRGSTNVVINKVTCGPGHGISVGSLGRYQNEMDVVGIRVENCSINGTTNGVRIKTWPG 306
           S+GRGS NV INK+TCGPGHGISVGSLG+Y NE DV GI V+NC++  T NG+RIKTWP 
Sbjct: 250 SLGRGSMNVAINKITCGPGHGISVGSLGKYPNEEDVRGIVVKNCTLLSTDNGLRIKTWPD 309

Query: 307 QHSSIATNLTFQNIVMSNVSNPIVIDQQY-CPNHSCKTHEASNVKLSEIKMRNISGSYNS 366
              S A+ + FQ+I M NV NPI+IDQ+Y C   +C+    S VK+S++   N+ GS  S
Sbjct: 310 SPPSAASGILFQDINMVNVKNPILIDQEYSCSKTNCQ-RPPSRVKISDVHYINVKGSSIS 369

Query: 367 EFAVNLQCSSGKACEKIELSYINLTATQPPDQ 398
             AV L+CS    C+ IE+  INL  + PP++
Sbjct: 370 PVAVQLKCSKQFPCQNIEMFNINLKYSGPPNK 399

[Close]

BLAST of MS014640.1 vs. ExPASy TrEMBL
Match: A0A6J1ISC3 (exopolygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111479527 PE=3 SV=1)

HSP 1 Score: 509.6 bits (1311), Expect = 1.2e-140
Identity = 252/395 (63.80%), Postives = 310/395 (78.48%), Query Frame = 0


Query: 5   SFLLTLLLLALVAVNADPPPIPHTPDPFKNVHLGKDIKHRNNEVVFNVLNYGAKADGKTD 64
           + L  LLL+ LVAVNA      + PD F+ ++ GKDI+HR  E VFNVL++GAK DGK D
Sbjct: 9   TLLTWLLLVELVAVNAKFFVGTNPPDLFQKINFGKDIRHR-KETVFNVLSFGAKPDGKKD 68

Query: 65  SSMNLIRTWVAACHSKGAARVVIPSGTFFINQVVFAGPCTCLSPIIVQIDAVLKGGTDLS 124
           ++ + ++TWVAACHSKGAARVVIP GTF INQ+VFAGPC   SPI+VQIDA LKGG DLS
Sbjct: 69  NTQSFMKTWVAACHSKGAARVVIPGGTFLINQIVFAGPCASTSPIVVQIDATLKGGIDLS 128

Query: 125 EFVSDEWILFEKINGLIVTGRGTLDGQGGSVWKYNDCGMNPDCTKLAVNLKLNGITHGLV 184
            +VS+EWILFEKINGLI+TGRGTLDGQG +VWKYNDCGMNP C KL VNLK NGIT+  +
Sbjct: 129 NYVSNEWILFEKINGLIITGRGTLDGQGDAVWKYNDCGMNPTCQKLPVNLKFNGITNVFM 188

Query: 185 KGITSTNSKGFHMFITNSQGVRVRRMHITAPEDSPNTDGIHLSRSNNVKISRSVIATGDD 244
           KGI+S NSKGFHMFITNS+ VR++++HITAP+DSPNTDGIHLSRSN VKISRSVI+TGDD
Sbjct: 189 KGISSINSKGFHMFITNSENVRLKKLHITAPDDSPNTDGIHLSRSNKVKISRSVISTGDD 248

Query: 245 CISIGRGSTNVVINKVTCGPGHGISVGSLGRYQNEMDVVGIRVENCSINGTTNGVRIKTW 304
           CIS+GRGS NV INK+TCGPGHGISVGSLG+Y NE DV+G+ ++NC++  T NG+RIKTW
Sbjct: 249 CISLGRGSMNVTINKITCGPGHGISVGSLGKYDNEEDVLGVVIKNCTLIKTDNGLRIKTW 308

Query: 305 PGQHSSIATNLTFQNIVMSNVSNPIVIDQQY-CPNHSCKTHEASNVKLSEIKMRNISGSY 364
           P    S A+ + FQ+I M +V NPI+IDQ+Y C   +C+    S VK+S++   N+ GS 
Sbjct: 309 PDSPPSAASGILFQDINMIDVKNPILIDQEYSCSKTNCQ-RPPSRVKISDVHFINVKGST 368

Query: 365 NSEFAVNLQCSSGKACEKIELSYINLTATQPPDQN 399
            S  AV+L+CS    C+ IEL  INL  + PP ++
Sbjct: 369 ISSVAVHLKCSKRFPCQNIELFNINLKYSGPPKKS 401

[Close]

BLAST of MS014640.1 vs. TAIR 10
Match: AT4G18180.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 330.1 bits (845), Expect = 2.6e-90
Identity = 166/353 (47.03%), Postives = 236/353 (66.86%), Query Frame = 0


Query: 40  DIKHRNNEVVFNVLNYGAKADGKTDSSMNLIRTWVAACHSKGAA-RVVIPSGTFFINQVV 99
           +I  +++  + +V ++GA+A+   D +   +  W  AC S  ++  ++IP G F +  + 
Sbjct: 25  NIVDKSSVFLVDVRSFGARANDHRDHTKAFVAAWDKACKSSSSSVNLIIPRGEFSVGSLR 84

Query: 100 FAGPCTCLSPIIVQIDAVLKGGTDLSEFVS-DEWILFEKINGLIVTGRGTLDGQGGSVWK 159
           F+GPCT +S + V++    K  TDLS++ S   WI F  INGL +TG GT DGQG   W 
Sbjct: 85  FSGPCTNVSNLTVRV----KASTDLSKYRSGGGWIQFGWINGLTLTGGGTFDGQGALAWP 144

Query: 160 YNDCGMNPDCTKLAVNLKLNGITHGLVKGITSTNSKGFHMFITNSQGVRVRRMHITAPED 219
           +N+C  + +C  L  +LK  G+   +V+ I+S NSK FH+ +   +  +  R++ITAP D
Sbjct: 145 FNNCTSDSNCKLLPTSLKFVGMNRTVVRRISSVNSKFFHIALVECRDFKGTRLNITAPSD 204

Query: 220 SPNTDGIHLSRSNNVKISRSVIATGDDCISIGRGSTNVVINKVTCGPGHGISVGSLGRYQ 279
           SPNTDGIH+ RS+NV  SRS IATGDDC+SIG+G++ + I  + CGPGHGISVGSLGRY 
Sbjct: 205 SPNTDGIHIERSSNVYFSRSHIATGDDCVSIGQGNSQITITSIKCGPGHGISVGSLGRYP 264

Query: 280 NEMDVVGIRVENCSINGTTNGVRIKTWPGQHS-SIATNLTFQNIVMSNVSNPIVIDQQYC 339
           NE DV G+ V++C I+GTTNG+RIKTW      S ATN+TF+NI+M+NV+NPI+IDQ YC
Sbjct: 265 NEKDVNGLVVKDCKISGTTNGIRIKTWANSPGLSAATNMTFENIIMNNVTNPIIIDQSYC 324

Query: 340 PNHSCKTHEASNVKLSEIKMRNISGSYNSEFAVNLQCSSGKACEKIELSYINL 390
           P  SC ++  S V+LSEI  +NI G+ +S  AV L CS G  C+K+ L  ++L
Sbjct: 325 PFSSCISNVPSKVELSEIYFKNIRGTSSSLVAVQLHCSRGMPCKKVYLENVHL 373

[Close]

BLAST of MS014640.1 vs. TAIR 10
Match: AT1G02790.1 (polygalacturonase 4 )

HSP 1 Score: 305.8 bits (782), Expect = 5.2e-83
Identity = 146/344 (42.44%), Postives = 214/344 (62.21%), Query Frame = 0


Query: 46  NEVVFNVLNYGAKADGKTDSSMNLIRTWVAACHSKGAARVVIPSGTFFINQVVFAGPCTC 105
           N  V+++  +GA  DG T++    + TW+  C S   A +++P GTF    V+FAGPC  
Sbjct: 48  NPTVYDITKFGAVGDGSTNTFKAFLNTWIQVCDSPVPATLLVPKGTFLAGPVIFAGPCK- 107

Query: 106 LSPIIVQIDAVLKGGTDLSEFVSDEWILFEKINGLIVTGRGTLDGQGGSVWKYNDCGMNP 165
            S + V +   +   T  S + + EW LFE+++ L++TG GT  G+G +VWK + CG   
Sbjct: 108 -SKVTVNVIGTIIATT--SGYATPEWFLFERVDNLVLTGTGTFHGKGEAVWKADGCGKKV 167

Query: 166 DCTKLAVNLKLNGITHGLVKGITSTNSKGFHMFITNSQGVRVRRMHITAPEDSPNTDGIH 225
            C     +LK   + +  + GI+S N+K FHMF+  ++ V ++ + +TAP +SPNTDGIH
Sbjct: 168 QCNLPPTSLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIH 227

Query: 226 LSRSNNVKISRSVIATGDDCISIGRGSTNVVINKVTCGPGHGISVGSLGRYQNEMDVVGI 285
           LS ++NV I  S IATGDDC+S+GRGS NV + +V CGPGHG+SVGSLG+Y+NE DV GI
Sbjct: 228 LSNADNVSILDSTIATGDDCVSVGRGSNNVTVERVICGPGHGLSVGSLGKYKNEEDVSGI 287

Query: 286 RVENCSINGTTNGVRIKTWPGQHSSIATNLTFQNIVMSNVSNPIVIDQQYCPNHSCKTHE 345
            V NC++  T NG+RIKTW G   S A ++ F+NI+M +V NPI+IDQ Y          
Sbjct: 288 HVNNCTMIETDNGLRIKTWGGSDPSKAVDIKFENIIMQSVKNPIIIDQNYGSRGG----- 347

Query: 346 ASNVKLSEIKMRNISGSYNSEFAVNLQCSSGKACEKIELSYINL 390
            S V +S+I  +NI G+  ++  V + CS    C+ + +  +NL
Sbjct: 348 DSQVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNL 382

[Close]

BLAST of MS014640.1 vs. TAIR 10
Match: AT3G14040.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 297.4 bits (760), Expect = 1.9e-80
Identity = 149/336 (44.35%), Postives = 199/336 (59.23%), Query Frame = 0


Query: 56  GAKADGKTDSSMNLIRTWVAACHSKGAARVVIPSGTFFINQVVFAGPCTCLSPIIVQIDA 115
           GAK DGKTD S      W  AC     + + +P G + +  + F GPC    P+ ++++ 
Sbjct: 77  GAKGDGKTDDSAAFAAAWKEAC--AAGSTITVPKGEYLVESLEFKGPCK--GPVTLELNG 136

Query: 116 VLKG-GTDLSEFVSDEWILFEKINGLIVTG-RGTLDGQGGSVWKYNDCGMNPDCTKLAVN 175
             K   T  +      WI FE +    + G +   DGQG   WK NDC     C  L +N
Sbjct: 137 NFKAPATVKTTKPHAGWIDFENLADFTLNGNKAIFDGQGSLAWKANDCAKTGKCNSLPIN 196

Query: 176 LKLNGITHGLVKGITSTNSKGFHMFITNSQGVRVRRMHITAPEDSPNTDGIHLSRSNNVK 235
           ++  G+T+  +  ITSTNSK FHM I N + + +  + I AP +S NTDGIH+ RSN V 
Sbjct: 197 IRFTGLTNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIHIGRSNGVN 256

Query: 236 ISRSVIATGDDCISIGRGSTNVVINKVTCGPGHGISVGSLGRYQNEMDVVGIRVENCSIN 295
           +  + I TGDDC+SIG G+ N+++  V CGPGHGIS+GSLGRY NE  V G+ V  C I 
Sbjct: 257 LIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIK 316

Query: 296 GTTNGVRIKTWPGQHSSIATNLTFQNIVMSNVSNPIVIDQQYCPNHSCKTHEASNVKLSE 355
            T NGVRIKTWPG    IA+N+ F++I M NVS P++IDQ+YCP   CK    S VKLS+
Sbjct: 317 NTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSKVKLSD 376

Query: 356 IKMRNISGSYNSEFAVNLQCSSGKACEKIELSYINL 390
           + ++NI G+  ++ AV L CS G  C  I LS INL
Sbjct: 377 VTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINL 408

[Close]

BLAST of MS014640.1 vs. TAIR 10
Match: AT2G33160.1 (glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein )

HSP 1 Score: 295.8 bits (756), Expect = 5.4e-80
Identity = 159/359 (44.29%), Postives = 220/359 (61.28%), Query Frame = 0


Query: 49  VFNVLNYGAKADGKTDSSMNLIRTWVAACH-SKGAARVVIPSGTFFINQVVFAGPCTCLS 108
           +F+V NYGA+AD + D++    + W  AC  S G + V IPSG F++ QV F+GPC   S
Sbjct: 31  IFDVRNYGARADSQRDNAFAFTKAWNEACQWSYGRSTVYIPSGIFYLRQVTFSGPCK--S 90

Query: 109 PIIVQIDAVLKGGTDLSEFVSDEWILFEKINGLIVTGRGTLDGQGGSVWKYNDCGMNPDC 168
            I   I   L    +      +EWILF+ ++ L VTG G LDGQG   W  NDC  N +C
Sbjct: 91  SITFFIRGTLLAPRNPYAINQEEWILFKYVDNLTVTGGGLLDGQGSYSWPLNDCNKNTNC 150

Query: 169 TKLAVNLKLNGITHGLVKGITSTNSKGFHMFITNSQGVRVRRMHITAPEDSPNTDGIHLS 228
             LA+N+    +    + G+ S NSK  H  + + +   +  + ITAP DSPNTDGI + 
Sbjct: 151 RTLAMNIGFAFVKSSKINGLRSINSKMGHFNLFSVEDFNITGVTITAPGDSPNTDGIKIG 210

Query: 229 RSNNVKISRSVIATGDDCISIGRGSTNVVINKVTCGPGHGISVGSLGRYQNEMDVVGIRV 288
           +S++++I    I TGDDCI+I  G++N+ I+ V CGPGHGISVGSLGRY+ E +V G+ V
Sbjct: 211 KSSHMQIYNVTIGTGDDCIAILDGTSNLDISDVRCGPGHGISVGSLGRYKEEKNVQGLTV 270

Query: 289 ENCSINGTTNGVRIKTWPGQHSSIA-TNLTFQNIVMSNVSNPIVIDQQYCPNHSCKT--H 348
            N  INGTT+G+RIKTW    S I+ +N  ++NI M NV NPIVIDQQYCP+  C +   
Sbjct: 271 RNSIINGTTDGLRIKTWAKSVSQISVSNFLYENIQMINVGNPIVIDQQYCPHGQCDSPGK 330

Query: 349 EASNVKLSEIKMRNISGSYNSEFAVNLQCSSGKACEKIELSYINLTATQPPDQNHQIGR 404
            AS+V++ ++K  NI G+  S+ A+ +QCS    C+ +ELS INL         H +GR
Sbjct: 331 YASHVQIKDVKYNNIWGTSTSKEALKMQCSKTFPCQDVELSNINL---------HYVGR 378

[Close]

BLAST of MS014640.1 vs. TAIR 10
Match: AT3G07830.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 295.4 bits (755), Expect = 7.1e-80
Identity = 140/332 (42.17%), Postives = 217/332 (65.36%), Query Frame = 0


Query: 63  TDSSMNLIRTWVAACHSKGAARVVIPSGTFFINQVVFAGPCTCLSPI-IVQIDAVLKGGT 122
           +D +  L+R +  AC S    +VVIP G F + +++ +GPC   SP+ I  +  VL  G 
Sbjct: 34  SDITQALLRAFTTACQSPTPRKVVIPKGQFKLGEIMMSGPCK--SPVEITLLGTVLADGN 93

Query: 123 DLSEFVSDEWILFEKINGLIVTGRGTLDGQGGSVWKYNDCGMNPDCTKLAVNLKLNGITH 182
            +     ++W++F++++G  + G GT DG+G + W+ N+C    +C KL ++++ + +T+
Sbjct: 94  SIHG--KEKWVVFQRMDGFRLNGGGTFDGEGNAAWRVNNCHKTFECKKLPISIRFDFVTN 153

Query: 183 GLVKGITSTNSKGFHMFITNSQGVRVRRMHITAPEDSPNTDGIHLSRSNNVKISRSVIAT 242
             ++ I+S ++K FH+ +  ++ +    + I AP +SPNTDGIHL RS  V I  S I+T
Sbjct: 154 AEIRDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGVSIINSRIST 213

Query: 243 GDDCISIGRGSTNVVINKVTCGPGHGISVGSLGRYQNEMDVVGIRVENCSINGTTNGVRI 302
           GDDC+S+G G  N+++  V CGPGHGISVGSLGRY +E DV GIRV NC++  T NG+RI
Sbjct: 214 GDDCVSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTLQETDNGLRI 273

Query: 303 KTWPGQH-SSIATNLTFQNIVMSNVSNPIVIDQQYCPNHSCKTHEASNVKLSEIKMRNIS 362
           KTWP    S+ A+N+ F+NI++ NVSNPI+IDQ+YCP + C   ++S++KL+ I  R I 
Sbjct: 274 KTWPSAACSTTASNIHFENIILRNVSNPILIDQEYCPWNQCNKQKSSSIKLANISFRRIR 333

Query: 363 GSYNSEFAVNLQCSSGKACEKIELSYINLTAT 393
           G+  ++ AV L CS G  CE +++  IN+  T
Sbjct: 334 GTSGNKDAVKLLCSKGYPCENVQVGDINIQYT 361

The following BLAST results are available for this feature:

BLAST of MS014640.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138171.1	1.1e-186	83.17	exopolygalacturonase-like [Momordica charantia]	[more]
XP_038877778.1	1.6e-150	68.29	exopolygalacturonase-like [Benincasa hispida]	[more]
XP_008438909.1	2.3e-149	68.62	PREDICTED: exopolygalacturonase-like [Cucumis melo] >KAA0049517.1 exopolygalactu...	[more]
XP_004134494.1	5.7e-148	67.86	exopolygalacturonase [Cucumis sativus]	[more]
XP_022980001.1	2.6e-140	63.80	exopolygalacturonase-like [Cucurbita maxima]	[more]

BLAST of MS014640.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6H9K0	1.7e-91	48.25	Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 S...	[more]
Q39766	2.7e-84	44.38	Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1	[more]
Q39786	3.5e-84	44.38	Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1	[more]
P49062	7.4e-82	42.44	Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana OX=3702 GN=PGA3 PE=2 ...	[more]
P35337	6.9e-80	41.13	Polygalacturonase OS=Brassica napus OX=3708 PE=2 SV=1	[more]

BLAST of MS014640.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C8Y3	5.1e-187	83.17	exopolygalacturonase-like OS=Momordica charantia OX=3673 GN=LOC111009407 PE=3 SV...	[more]
A0A5D3CWB7	1.1e-149	68.62	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3AXH3	1.1e-149	68.62	exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103483868 PE=3 SV=1	[more]
A0A0A0LAM9	2.8e-148	67.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G164550 PE=3 SV=1	[more]
A0A6J1ISC3	1.2e-140	63.80	exopolygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111479527 PE=3 SV=1	[more]

BLAST of MS014640.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G18180.1	2.6e-90	47.03	Pectin lyase-like superfamily protein	[more]
AT1G02790.1	5.2e-83	42.44	polygalacturonase 4	[more]
AT3G14040.1	1.9e-80	44.35	Pectin lyase-like superfamily protein	[more]
AT2G33160.1	5.4e-80	44.29	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family pro...	[more]
AT3G07830.1	7.1e-80	42.17	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 312..333 e-value: 1300.0 score: 6.4 coord: 202..228 e-value: 800.0 score: 7.9 coord: 252..272 e-value: 5500.0 score: 2.0 coord: 229..250 e-value: 320.0 score: 10.1 coord: 282..303 e-value: 8.8 score: 15.3
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 77..393 e-value: 5.9E-88 score: 295.1
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 259..272
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 34..414 e-value: 1.7E-103 score: 348.7
None	No IPR available	PANTHER	PTHR31375:SF117	EXOPOLYGALACTURONASE-LIKE	coord: 11..410
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 11..410
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 47..393

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS014640	MS014640	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS014640.1-cds	MS014640.1-cds-scaffold1096:249232..249432	CDS
MS014640.1-cds	MS014640.1-cds-scaffold1096:249532..249846	CDS
MS014640.1-cds	MS014640.1-cds-scaffold1096:249934..250223	CDS
MS014640.1-cds	MS014640.1-cds-scaffold1096:260993..261221	CDS
MS014640.1-cds	MS014640.1-cds-scaffold1096:261520..261744	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS014640.1	MS014640.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity