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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGAGGCCACCATGCCGCAGTACGCTTCGTTTGCCACAAGCTCTTCTGCATTCAAGTGCAAAGAAGCCACAAAATCGTTGATTTGCTCGTCTCCTTATAGAGTACTA mRNA sequence ATGGAGGCCACCATGCCGCAGTACGCTTCGTTTGCCACAAGCTCTTCTGCATTCAAGTGCAAAGAAGCCACAAAATCGTTGATTTGCTCGTCTCCTTATAGAGTACTA Coding sequence (CDS) ATGGAGGCCACCATGCCGCAGTACGCTTCGTTTGCCACAAGCTCTTCTGCATTCAAGTGCAAAGAAGCCACAAAATCGTTGATTTGCTCGTCTCCTTATAGAGTACTA Protein sequence MEATMPQYASFATSSSAFKCKEATKSLICSSPYRVL
Homology
BLAST of MS014616.1 vs. NCBI nr
Match: XP_022137948.1 (isoleucine--tRNA ligase, chloroplastic/mitochondrial [Momordica charantia]) HSP 1 Score: 68.9 bits (167), Expect = 9.9e-09 Identity = 35/36 (97.22%), Postives = 35/36 (97.22%), Query Frame = 0
Query: 1 MEATMPQYASFATSSSAFKCKEATKSLICSSPYRVL 37
MEATMPQYAS ATSSSAFKCKEATKSLICSSPYRVL
Sbjct: 1 MEATMPQYASSATSSSAFKCKEATKSLICSSPYRVL 36
BLAST of MS014616.1 vs. ExPASy TrEMBL
Match: A0A6J1CBR1 (Isoleucyl-tRNA synthetase OS=Momordica charantia OX=3673 GN=LOC111009237 PE=3 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 4.8e-09 Identity = 35/36 (97.22%), Postives = 35/36 (97.22%), Query Frame = 0
Query: 1 MEATMPQYASFATSSSAFKCKEATKSLICSSPYRVL 37
MEATMPQYAS ATSSSAFKCKEATKSLICSSPYRVL
Sbjct: 1 MEATMPQYASSATSSSAFKCKEATKSLICSSPYRVL 36
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022137948.1 | 9.9e-09 | 97.22 | isoleucine--tRNA ligase, chloroplastic/mitochondrial [Momordica charantia] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1CBR1 | 4.8e-09 | 97.22 | Isoleucyl-tRNA synthetase OS=Momordica charantia OX=3673 GN=LOC111009237 PE=3 SV... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Type |
|---|
| MS014616 | MS014616 | gene |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MS014616.1-cds | MS014616.1-cds-scaffold1096:98095..98202 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MS014616.1 | MS014616.1-protein | polypeptide |
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