MS014258.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS014258.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	flowering-promoting factor 1-like
Location	scaffold5: 1706286 .. 1706681 (+)
Sequence length	396
RNA-Seq Expression	MS014258.1
Synteny	MS014258.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGGCGTTTGGGTGTTCGACAAGAACGGCGTGGCCCGGTTGATCGCGAACCCAACGAGGGAGTCGTTCGAGGGGAAGGACCCGCCGTATCCGGGGACGGCGACGGCGCCAGGGGCTCGGCCGAGAGTGCTGGTGTACCTTCCGGCGAACCAGGTGATCGGGTCGTACGCGGAACTGGAGCAGCGACTGGGTGAACTCGGGTGGACTCGGTACCGGAACTCATCCGCCGAACCGGAGGAACTCGTCCGATTCCATCGCTCCCACGACTCGGCCGACCTCATTTCCCTCCCCAAAAGCTTCGCCAAATTCAAGCCCATGCACATGTACGACATCGTCGTCAAAAATCGACATTTCTTCCAAGTTCGCGACCCAAAATCAGCAGCAGCCTCTTCT

mRNA sequence

ATGTCGGGCGTTTGGGTGTTCGACAAGAACGGCGTGGCCCGGTTGATCGCGAACCCAACGAGGGAGTCGTTCGAGGGGAAGGACCCGCCGTATCCGGGGACGGCGACGGCGCCAGGGGCTCGGCCGAGAGTGCTGGTGTACCTTCCGGCGAACCAGGTGATCGGGTCGTACGCGGAACTGGAGCAGCGACTGGGTGAACTCGGGTGGACTCGGTACCGGAACTCATCCGCCGAACCGGAGGAACTCGTCCGATTCCATCGCTCCCACGACTCGGCCGACCTCATTTCCCTCCCCAAAAGCTTCGCCAAATTCAAGCCCATGCACATGTACGACATCGTCGTCAAAAATCGACATTTCTTCCAAGTTCGCGACCCAAAATCAGCAGCAGCCTCTTCT

Coding sequence (CDS)

ATGTCGGGCGTTTGGGTGTTCGACAAGAACGGCGTGGCCCGGTTGATCGCGAACCCAACGAGGGAGTCGTTCGAGGGGAAGGACCCGCCGTATCCGGGGACGGCGACGGCGCCAGGGGCTCGGCCGAGAGTGCTGGTGTACCTTCCGGCGAACCAGGTGATCGGGTCGTACGCGGAACTGGAGCAGCGACTGGGTGAACTCGGGTGGACTCGGTACCGGAACTCATCCGCCGAACCGGAGGAACTCGTCCGATTCCATCGCTCCCACGACTCGGCCGACCTCATTTCCCTCCCCAAAAGCTTCGCCAAATTCAAGCCCATGCACATGTACGACATCGTCGTCAAAAATCGACATTTCTTCCAAGTTCGCGACCCAAAATCAGCAGCAGCCTCTTCT

Protein sequence

MSGVWVFDKNGVARLIANPTRESFEGKDPPYPGTATAPGARPRVLVYLPANQVIGSYAELEQRLGELGWTRYRNSSAEPEELVRFHRSHDSADLISLPKSFAKFKPMHMYDIVVKNRHFFQVRDPKSAAASS

Homology

[Close]

BLAST of MS014258.1 vs. NCBI nr
Match: XP_022148408.1 (flowering-promoting factor 1-like [Momordica charantia])

HSP 1 Score: 272.7 bits (696), Expect = 1.7e-69
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MSGVWVFDKNGVARLIANPTRESFEGKDPPYPGTATAPGARPRVLVYLPANQVIGSYAEL 60
           MSGVWVFDKNGVARLIANPTRESFEGKDPPYPGTATAPGARPRVLVYLPANQVIGSYAEL
Sbjct: 1   MSGVWVFDKNGVARLIANPTRESFEGKDPPYPGTATAPGARPRVLVYLPANQVIGSYAEL 60

Query: 61  EQRLGELGWTRYRNSSAEPEELVRFHRSHDSADLISLPKSFAKFKPMHMYDIVVKNRHFF 120
           EQRLGELGWTRYRNSSAEPEELVRFHRSHDSADLISLPKSFAKFKPMHMYDIVVKNRHFF
Sbjct: 61  EQRLGELGWTRYRNSSAEPEELVRFHRSHDSADLISLPKSFAKFKPMHMYDIVVKNRHFF 120

Query: 121 QVRDPKSAAASS 133
           QVRDPKSAAASS
Sbjct: 121 QVRDPKSAAASS 132

[Close]

BLAST of MS014258.1 vs. NCBI nr
Match: KAG6570697.1 (Flowering-promoting factor 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010544.1 Flowering-promoting factor 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 234.6 bits (597), Expect = 5.0e-58
Identity = 116/131 (88.55%), Postives = 123/131 (93.89%), Query Frame = 0


Query: 1   MSGVWVFDKNGVARLIANPTRESFEGKDPPYPGTATAPGARPRVLVYLPANQVIGSYAEL 60
           MSGVWVFDKNGVARLI+NPTRESFE KDPPYPGTATAPGARPRVLVYLP NQVI SYAEL
Sbjct: 1   MSGVWVFDKNGVARLISNPTRESFECKDPPYPGTATAPGARPRVLVYLPTNQVIRSYAEL 60

Query: 61  EQRLGELGWTRYRNSSAEPEELVRFHRSHDSADLISLPKSFAKFKPMHMYDIVVKNRHFF 120
           EQRLGELGW+RYRN SAEP +L++FHRSHDSA LISLPKSFAKFKPMHMYDIVVKNRHFF
Sbjct: 61  EQRLGELGWSRYRN-SAEP-DLLQFHRSHDSAHLISLPKSFAKFKPMHMYDIVVKNRHFF 120

Query: 121 QVRDPKSAAAS 132
           +VRDPKS+  S
Sbjct: 121 EVRDPKSSHPS 129

[Close]

BLAST of MS014258.1 vs. NCBI nr
Match: TXG74079.1 (hypothetical protein EZV62_002658 [Acer yangbiense])

HSP 1 Score: 206.8 bits (525), Expect = 1.1e-49
Identity = 100/130 (76.92%), Postives = 112/130 (86.15%), Query Frame = 0


Query: 1   MSGVWVFDKNGVARLIANPTRESFEGKDPPYPGTATAPGARPRVLVYLPANQVIGSYAEL 60
           MSGVW+FDKNGVARLI+NPTRESFE K+PPYPGTATAPGARPRVLVYLP NQVI SY EL
Sbjct: 1   MSGVWIFDKNGVARLISNPTRESFEQKEPPYPGTATAPGARPRVLVYLPENQVISSYTEL 60

Query: 61  EQRLGELGWTRYRNSSAEPEELVRFHRSHDSADLISLPKSFAKFKPMHMYDIVVKNRHFF 120
           EQRL ELGWTRY NS  E   L++FH+S +SADLISLP +FA FK +HMYDIVVKNR FF
Sbjct: 61  EQRLTELGWTRYENS--ERPNLLQFHKSQNSADLISLPINFANFKSLHMYDIVVKNRSFF 120

Query: 121 QVRDPKSAAA 131
           +VRDP + +A
Sbjct: 121 EVRDPAATSA 128

[Close]

BLAST of MS014258.1 vs. NCBI nr
Match: BBH04787.1 (flowering promoting factor 1 [Prunus dulcis] >VVA23053.1 PREDICTED: flowering-promoting factor [Prunus dulcis])

HSP 1 Score: 206.5 bits (524), Expect = 1.5e-49
Identity = 101/125 (80.80%), Postives = 109/125 (87.20%), Query Frame = 0


Query: 1   MSGVWVFDKNGVARLIANPTRESFEGKDPPYPGTATAPGARPRVLVYLPANQVIGSYAEL 60
           MSGVW+FDKNGVARLI NPTRESFE K+PPYPGTATAPGARPRVLVYLPANQVI SY+EL
Sbjct: 1   MSGVWIFDKNGVARLITNPTRESFEQKEPPYPGTATAPGARPRVLVYLPANQVIRSYSEL 60

Query: 61  EQRLGELGWTRYRNSSAEPEELVRFHRSHDSADLISLPKSFAKFKPMHMYDIVVKNRHFF 120
           EQRL ELGWTRY NS     +L++FHRS  SADLISLP +FA FK +HMYDIVVKNR FF
Sbjct: 61  EQRLTELGWTRYPNSLR--PDLLQFHRSESSADLISLPTNFANFKSLHMYDIVVKNRSFF 120

Query: 121 QVRDP 126
           QVRDP
Sbjct: 121 QVRDP 123

[Close]

BLAST of MS014258.1 vs. NCBI nr
Match: CAB4282452.1 (unnamed protein product [Prunus armeniaca] >CAB4312865.1 unnamed protein product [Prunus armeniaca])

HSP 1 Score: 205.3 bits (521), Expect = 3.2e-49
Identity = 100/125 (80.00%), Postives = 109/125 (87.20%), Query Frame = 0


Query: 1   MSGVWVFDKNGVARLIANPTRESFEGKDPPYPGTATAPGARPRVLVYLPANQVIGSYAEL 60
           MSGVW+FDKNGVARLI NPTRESFE K+PPYPGTATAPGARPRVLVYLPANQVI SY+EL
Sbjct: 1   MSGVWIFDKNGVARLITNPTRESFEQKEPPYPGTATAPGARPRVLVYLPANQVIRSYSEL 60

Query: 61  EQRLGELGWTRYRNSSAEPEELVRFHRSHDSADLISLPKSFAKFKPMHMYDIVVKNRHFF 120
           EQRL ELGWTRY NS     +L++FHRS  SADLISLP +FA FK +HMYDIVVKNR FF
Sbjct: 61  EQRLTELGWTRYPNSLR--PDLLQFHRSESSADLISLPTNFANFKALHMYDIVVKNRSFF 120

Query: 121 QVRDP 126
           +VRDP
Sbjct: 121 EVRDP 123

[Close]

BLAST of MS014258.1 vs. ExPASy Swiss-Prot
Match: Q5Q0B3 (Flowering-promoting factor 1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=FLP1 PE=2 SV=2)

HSP 1 Score: 113.2 bits (282), Expect = 2.2e-24
Identity = 60/125 (48.00%), Postives = 81/125 (64.80%), Query Frame = 0


Query: 1   MSGVWVFDKNGVARLIANPTRESF-EGKDPPYPGTATAPGARPRVLVYLPANQVIGSYAE 60
           MSGVWVF+KNGV RL+ NP  +S  +  +    G       R ++LV+LP+++V+ SY  
Sbjct: 1   MSGVWVFNKNGVMRLVENPYNQSAGDSSESSSSGGNQQQRMRRKILVHLPSSEVVSSYGS 60

Query: 61  LEQRLGELGWTRYRNSSAEPEELVRFHRSHDSADLISLPKSFAKFKPMHMYDIVVKNRHF 120
           LE+ L  LGW RY  S    + L++FH+   S DLISLP+ F+KF  +HMYDIVVKN + 
Sbjct: 61  LEKILKNLGWERY-YSGDNTDHLLQFHK-RTSIDLISLPRDFSKFNSIHMYDIVVKNPNV 120

Query: 121 FQVRD 125
           F VRD
Sbjct: 121 FHVRD 123

[Close]

BLAST of MS014258.1 vs. ExPASy Swiss-Prot
Match: O24340 (Flowering-promoting factor 1 OS=Sinapis alba OX=3728 GN=FPF1 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.1e-22
Identity = 62/124 (50.00%), Postives = 77/124 (62.10%), Query Frame = 0


Query: 1   MSGVWVFDKNGVARLIANPTRESFEGKDPPYPGTATAPGARPRVLVYLPANQVIGSYAEL 60
           MSGVWVF KNGV RL+ NP +    G D           +R +V+VYLP  +VI SY+ L
Sbjct: 1   MSGVWVF-KNGVIRLVENPNQ---SGGD---------TNSRRKVMVYLPTGEVISSYSTL 60

Query: 61  EQRLGELGWTRYRNSSAEPEELVRFHRSHDSADLISLPKSFAKFKPMHMYDIVVKNRHFF 120
           EQ L  LGW RY        +L++FH+   S DLISLPK F KF  ++MYDIVVKN ++F
Sbjct: 61  EQILRSLGWERYFGGG--DTDLLQFHK-RSSIDLISLPKDFTKFSSVYMYDIVVKNPNYF 108

Query: 121 QVRD 125
            VRD
Sbjct: 121 HVRD 108

[Close]

BLAST of MS014258.1 vs. ExPASy Swiss-Prot
Match: Q9LXB5 (Flowering-promoting factor 1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=FLP2 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.7e-22
Identity = 58/124 (46.77%), Postives = 77/124 (62.10%), Query Frame = 0


Query: 1   MSGVWVFDKNGVARLIANPTRESFEGKDPPYPGTATAPGARPRVLVYLPANQVIGSYAEL 60
           MSGVWVF+ NGV RL+ NP +           G +T    R  VLVYLP  + + SY+ L
Sbjct: 1   MSGVWVFN-NGVIRLVENPNQSG---------GVSTQSHGRRNVLVYLPTGEAVSSYSSL 60

Query: 61  EQRLGELGWTRYRNSSAEPEELVRFHRSHDSADLISLPKSFAKFKPMHMYDIVVKNRHFF 120
           EQ L  LGW RY +  +   +L+++H+   S DLISLP+ F+KF  ++MYDIVVKN + F
Sbjct: 61  EQILRSLGWERYFSGDS---DLIQYHK-RSSIDLISLPRDFSKFNSVYMYDIVVKNPNSF 110

Query: 121 QVRD 125
            VRD
Sbjct: 121 HVRD 110

[Close]

BLAST of MS014258.1 vs. ExPASy Swiss-Prot
Match: O23624 (Flowering-promoting factor 1 OS=Arabidopsis thaliana OX=3702 GN=FPF1 PE=1 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.7e-22
Identity = 58/124 (46.77%), Postives = 77/124 (62.10%), Query Frame = 0


Query: 1   MSGVWVFDKNGVARLIANPTRESFEGKDPPYPGTATAPGARPRVLVYLPANQVIGSYAEL 60
           MSGVWVF KNGV RL+ NP +   + ++            R +V+VYLP  +V+ SY+ L
Sbjct: 1   MSGVWVF-KNGVIRLVENPNQSGSDTQN------------RRKVMVYLPTGEVVSSYSTL 60

Query: 61  EQRLGELGWTRYRNSSAEPEELVRFHRSHDSADLISLPKSFAKFKPMHMYDIVVKNRHFF 120
           EQ L  LGW RY        +L++FH+   S DLISLP+ F KF  ++MYDIVVKN ++F
Sbjct: 61  EQILQSLGWERYFGGG--DTDLLQFHK-RSSIDLISLPRDFTKFNSVYMYDIVVKNPNYF 108

Query: 121 QVRD 125
            VRD
Sbjct: 121 HVRD 108

[Close]

BLAST of MS014258.1 vs. ExPASy Swiss-Prot
Match: Q8LR63 (Flowering-promoting factor 1-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0933500 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 4.6e-22
Identity = 57/128 (44.53%), Postives = 80/128 (62.50%), Query Frame = 0


Query: 1   MSGVWVFDKNGVARLIANPTRESFEGKDPPYPGTATAPGARPRVLVYLPANQVIGSYAEL 60
           MSGVWVF +NGV +L+ NP   +  G      G     G R + L+++P  +V+ SYA L
Sbjct: 1   MSGVWVF-RNGVVKLVENPPASANSGGGGGGGGGGGGGGIRRKALLHMPTGEVVTSYASL 60

Query: 61  EQRLGELGWTRYRN----SSAEPEELVRFHRSHDSADLISLPKSFAKFKPMHMYDIVVKN 120
           E++L  LGW RY +    ++A    +++FH+   S DLISLPK F++F  +HMYDIVVKN
Sbjct: 61  ERKLAALGWERYYSGGGGAAAAAAMMLQFHK-RSSVDLISLPKDFSQFGSVHMYDIVVKN 120

Query: 121 RHFFQVRD 125
           R  F+V D
Sbjct: 121 RDAFRVID 126

[Close]

BLAST of MS014258.1 vs. ExPASy TrEMBL
Match: A0A6J1D405 (flowering-promoting factor 1-like OS=Momordica charantia OX=3673 GN=LOC111017063 PE=3 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 8.0e-70
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MSGVWVFDKNGVARLIANPTRESFEGKDPPYPGTATAPGARPRVLVYLPANQVIGSYAEL 60
           MSGVWVFDKNGVARLIANPTRESFEGKDPPYPGTATAPGARPRVLVYLPANQVIGSYAEL
Sbjct: 1   MSGVWVFDKNGVARLIANPTRESFEGKDPPYPGTATAPGARPRVLVYLPANQVIGSYAEL 60

Query: 61  EQRLGELGWTRYRNSSAEPEELVRFHRSHDSADLISLPKSFAKFKPMHMYDIVVKNRHFF 120
           EQRLGELGWTRYRNSSAEPEELVRFHRSHDSADLISLPKSFAKFKPMHMYDIVVKNRHFF
Sbjct: 61  EQRLGELGWTRYRNSSAEPEELVRFHRSHDSADLISLPKSFAKFKPMHMYDIVVKNRHFF 120

Query: 121 QVRDPKSAAASS 133
           QVRDPKSAAASS
Sbjct: 121 QVRDPKSAAASS 132

[Close]

BLAST of MS014258.1 vs. ExPASy TrEMBL
Match: A0A0A0KE84 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G190350 PE=3 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 6.6e-56
Identity = 113/131 (86.26%), Postives = 119/131 (90.84%), Query Frame = 0


Query: 1   MSGVWVFDKNGVARLIANPTRESFEGKDPPYPGTATAPGARPRVLVYLPANQVIGSYAEL 60
           MSGVWVFDKNGVARLI+NPTRESFE KDPP+PGTATAPGARPRVLVYLP NQVI SYAEL
Sbjct: 1   MSGVWVFDKNGVARLISNPTRESFECKDPPHPGTATAPGARPRVLVYLPTNQVIRSYAEL 60

Query: 61  EQRLGELGWTRYRNSSAEPEELVRFHRSHDSADLISLPKSFAKFKPMHMYDIVVKNRHFF 120
           EQRL ELGWTRY N  AEP +L++FHRSHDSA LISLPKSFAKFKPMHMYDIVVKNRHFF
Sbjct: 61  EQRLAELGWTRYPN-LAEP-DLLQFHRSHDSAHLISLPKSFAKFKPMHMYDIVVKNRHFF 120

Query: 121 QVRDPKSAAAS 132
           QVRDP S+  S
Sbjct: 121 QVRDPTSSPTS 129

[Close]

BLAST of MS014258.1 vs. ExPASy TrEMBL
Match: A0A5C7IY84 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_002658 PE=3 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 5.4e-50
Identity = 100/130 (76.92%), Postives = 112/130 (86.15%), Query Frame = 0


Query: 1   MSGVWVFDKNGVARLIANPTRESFEGKDPPYPGTATAPGARPRVLVYLPANQVIGSYAEL 60
           MSGVW+FDKNGVARLI+NPTRESFE K+PPYPGTATAPGARPRVLVYLP NQVI SY EL
Sbjct: 1   MSGVWIFDKNGVARLISNPTRESFEQKEPPYPGTATAPGARPRVLVYLPENQVISSYTEL 60

Query: 61  EQRLGELGWTRYRNSSAEPEELVRFHRSHDSADLISLPKSFAKFKPMHMYDIVVKNRHFF 120
           EQRL ELGWTRY NS  E   L++FH+S +SADLISLP +FA FK +HMYDIVVKNR FF
Sbjct: 61  EQRLTELGWTRYENS--ERPNLLQFHKSQNSADLISLPINFANFKSLHMYDIVVKNRSFF 120

Query: 121 QVRDPKSAAA 131
           +VRDP + +A
Sbjct: 121 EVRDPAATSA 128

[Close]

BLAST of MS014258.1 vs. ExPASy TrEMBL
Match: A0A4Y1RLM7 (Flowering promoting factor 1 OS=Prunus dulcis OX=3755 GN=ALMOND_2B008132 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 7.1e-50
Identity = 101/125 (80.80%), Postives = 109/125 (87.20%), Query Frame = 0


Query: 1   MSGVWVFDKNGVARLIANPTRESFEGKDPPYPGTATAPGARPRVLVYLPANQVIGSYAEL 60
           MSGVW+FDKNGVARLI NPTRESFE K+PPYPGTATAPGARPRVLVYLPANQVI SY+EL
Sbjct: 1   MSGVWIFDKNGVARLITNPTRESFEQKEPPYPGTATAPGARPRVLVYLPANQVIRSYSEL 60

Query: 61  EQRLGELGWTRYRNSSAEPEELVRFHRSHDSADLISLPKSFAKFKPMHMYDIVVKNRHFF 120
           EQRL ELGWTRY NS     +L++FHRS  SADLISLP +FA FK +HMYDIVVKNR FF
Sbjct: 61  EQRLTELGWTRYPNSLR--PDLLQFHRSESSADLISLPTNFANFKSLHMYDIVVKNRSFF 120

Query: 121 QVRDP 126
           QVRDP
Sbjct: 121 QVRDP 123

[Close]

BLAST of MS014258.1 vs. ExPASy TrEMBL
Match: M5WHZ4 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G075900 PE=3 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.6e-49
Identity = 100/125 (80.00%), Postives = 109/125 (87.20%), Query Frame = 0


Query: 1   MSGVWVFDKNGVARLIANPTRESFEGKDPPYPGTATAPGARPRVLVYLPANQVIGSYAEL 60
           MSGVW+FDKNGVARLI NPTRESFE K+PPYPGTATAPGARPRVLVYLPANQVI SY+EL
Sbjct: 1   MSGVWIFDKNGVARLITNPTRESFEQKEPPYPGTATAPGARPRVLVYLPANQVIRSYSEL 60

Query: 61  EQRLGELGWTRYRNSSAEPEELVRFHRSHDSADLISLPKSFAKFKPMHMYDIVVKNRHFF 120
           EQRL ELGWTRY NS     +L++FHRS  SADLISLP +FA FK +HMYDIVVKNR FF
Sbjct: 61  EQRLTELGWTRYPNSLR--PDLLQFHRSESSADLISLPTNFANFKSLHMYDIVVKNRSFF 120

Query: 121 QVRDP 126
           +VRDP
Sbjct: 121 EVRDP 123

[Close]

BLAST of MS014258.1 vs. TAIR 10
Match: AT4G31380.1 (FPF1-like protein 1 )

HSP 1 Score: 113.2 bits (282), Expect = 1.6e-25
Identity = 60/125 (48.00%), Postives = 81/125 (64.80%), Query Frame = 0


Query: 1   MSGVWVFDKNGVARLIANPTRESF-EGKDPPYPGTATAPGARPRVLVYLPANQVIGSYAE 60
           MSGVWVF+KNGV RL+ NP  +S  +  +    G       R ++LV+LP+++V+ SY  
Sbjct: 58  MSGVWVFNKNGVMRLVENPYNQSAGDSSESSSSGGNQQQRMRRKILVHLPSSEVVSSYGS 117

Query: 61  LEQRLGELGWTRYRNSSAEPEELVRFHRSHDSADLISLPKSFAKFKPMHMYDIVVKNRHF 120
           LE+ L  LGW RY  S    + L++FH+   S DLISLP+ F+KF  +HMYDIVVKN + 
Sbjct: 118 LEKILKNLGWERY-YSGDNTDHLLQFHK-RTSIDLISLPRDFSKFNSIHMYDIVVKNPNV 177

Query: 121 FQVRD 125
           F VRD
Sbjct: 178 FHVRD 180

[Close]

BLAST of MS014258.1 vs. TAIR 10
Match: AT5G10625.1 (BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 106.3 bits (264), Expect = 1.9e-23
Identity = 58/124 (46.77%), Postives = 77/124 (62.10%), Query Frame = 0


Query: 1   MSGVWVFDKNGVARLIANPTRESFEGKDPPYPGTATAPGARPRVLVYLPANQVIGSYAEL 60
           MSGVWVF+ NGV RL+ NP +           G +T    R  VLVYLP  + + SY+ L
Sbjct: 1   MSGVWVFN-NGVIRLVENPNQSG---------GVSTQSHGRRNVLVYLPTGEAVSSYSSL 60

Query: 61  EQRLGELGWTRYRNSSAEPEELVRFHRSHDSADLISLPKSFAKFKPMHMYDIVVKNRHFF 120
           EQ L  LGW RY +  +   +L+++H+   S DLISLP+ F+KF  ++MYDIVVKN + F
Sbjct: 61  EQILRSLGWERYFSGDS---DLIQYHK-RSSIDLISLPRDFSKFNSVYMYDIVVKNPNSF 110

Query: 121 QVRD 125
            VRD
Sbjct: 121 HVRD 110

[Close]

BLAST of MS014258.1 vs. TAIR 10
Match: AT5G24860.1 (flowering promoting factor 1 )

HSP 1 Score: 106.3 bits (264), Expect = 1.9e-23
Identity = 58/124 (46.77%), Postives = 77/124 (62.10%), Query Frame = 0


Query: 1   MSGVWVFDKNGVARLIANPTRESFEGKDPPYPGTATAPGARPRVLVYLPANQVIGSYAEL 60
           MSGVWVF KNGV RL+ NP +   + ++            R +V+VYLP  +V+ SY+ L
Sbjct: 1   MSGVWVF-KNGVIRLVENPNQSGSDTQN------------RRKVMVYLPTGEVVSSYSTL 60

Query: 61  EQRLGELGWTRYRNSSAEPEELVRFHRSHDSADLISLPKSFAKFKPMHMYDIVVKNRHFF 120
           EQ L  LGW RY        +L++FH+   S DLISLP+ F KF  ++MYDIVVKN ++F
Sbjct: 61  EQILQSLGWERYFGGG--DTDLLQFHK-RSSIDLISLPRDFTKFNSVYMYDIVVKNPNYF 108

Query: 121 QVRD 125
            VRD
Sbjct: 121 HVRD 108

The following BLAST results are available for this feature:

BLAST of MS014258.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148408.1	1.7e-69	100.00	flowering-promoting factor 1-like [Momordica charantia]	[more]
KAG6570697.1	5.0e-58	88.55	Flowering-promoting factor 1, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
TXG74079.1	1.1e-49	76.92	hypothetical protein EZV62_002658 [Acer yangbiense]	[more]
BBH04787.1	1.5e-49	80.80	flowering promoting factor 1 [Prunus dulcis] >VVA23053.1 PREDICTED: flowering-pr...	[more]
CAB4282452.1	3.2e-49	80.00	unnamed protein product [Prunus armeniaca] >CAB4312865.1 unnamed protein product...	[more]

BLAST of MS014258.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5Q0B3	2.2e-24	48.00	Flowering-promoting factor 1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=F...	[more]
O24340	2.1e-22	50.00	Flowering-promoting factor 1 OS=Sinapis alba OX=3728 GN=FPF1 PE=2 SV=1	[more]
Q9LXB5	2.7e-22	46.77	Flowering-promoting factor 1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=F...	[more]
O23624	2.7e-22	46.77	Flowering-promoting factor 1 OS=Arabidopsis thaliana OX=3702 GN=FPF1 PE=1 SV=1	[more]
Q8LR63	4.6e-22	44.53	Flowering-promoting factor 1-like protein 2 OS=Oryza sativa subsp. japonica OX=3...	[more]

BLAST of MS014258.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D405	8.0e-70	100.00	flowering-promoting factor 1-like OS=Momordica charantia OX=3673 GN=LOC111017063...	[more]
A0A0A0KE84	6.6e-56	86.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G190350 PE=3 SV=1	[more]
A0A5C7IY84	5.4e-50	76.92	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_002658 PE=3 SV=1	[more]
A0A4Y1RLM7	7.1e-50	80.80	Flowering promoting factor 1 OS=Prunus dulcis OX=3755 GN=ALMOND_2B008132 PE=3 SV...	[more]
M5WHZ4	1.6e-49	80.00	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G075900 PE=3 SV=1	[more]

BLAST of MS014258.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G31380.1	1.6e-25	48.00	FPF1-like protein 1	[more]
AT5G10625.1	1.9e-23	46.77	BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:A...	[more]
AT5G24860.1	1.9e-23	46.77	flowering promoting factor 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33433:SF11	FLOWERING-PROMOTING FACTOR 1-LIKE	coord: 1..125
IPR039274	Flowering-promoting factor 1	PANTHER	PTHR33433	FLOWERING-PROMOTING FACTOR 1-LIKE PROTEIN 1	coord: 1..125

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS014258	MS014258	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS014258.1-cds	MS014258.1-cds-scaffold5:1706286..1706681	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS014258.1	MS014258.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009909	regulation of flower development