MS013841.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS013841.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Heat-inducible transcription repressor
Location	scaffold607: 175548 .. 178860 (+)
Sequence length	1224
RNA-Seq Expression	MS013841.1
Synteny	MS013841.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTATAGGAGGAGGCAAGGAATCACGAGGGCTTCCACTTTCAAAGAAGAGATTCATCATCCTCCCGAGGATTTCGATCACAATCCTATCTCTTCTTCTTCGTCTTCGTCTTCTTCTCTTGCCGCTCAGGCGATCCGAGATTCTTCGCATTCCTCTGCCTATGGCACCTCCGCTTTTGCCCCTGGCCATCTTCGATCCAAGGTTCTCTCCTATTTTCTCTTCTTTTTAATTGTTTACACGCCCCGAGTTTTATTTGTATTACTGTATTGGCTTGATCATGATCATGATTAGGAATTACCTGAAATCTCGATCCGATTTTGTCTTTTGCTATTGCTCCACCGCTGCCTAGAGTTTTGGCAGATCAACGTTATCTGACTGCTTACATATTCTCATAGCATTGTGCTTCTCTGTTTTTTGGCAAATGTTGCGAATTCGGTAGAGCCTTTTCTTCGCTATTTCTTATCTGCCTAACCAATTAGAAGAAGGATGATATAGTGTTGGTTCATTTCCGTGTTCGTGTTTGAATTATTCAGGAATTTCTGTAGTTTTTGTTCGTCCATTAGAATATGTTTTCATAGGCTGCCATGTAATCTGTATGTAGTCTTATCCCCTTAATTCCAGAGTTTTGCTGGCGAGAATGTGGCATTCAAAAGTGAGTCTAAATCCGGGTTTTGGGGCGTACTGGCTCGGAAAGCTAAGGCCATTCTCGAAGAAGATACCGTAGCCATAGAAGATGAAATGGCCAGCACAAATAGTTTCCAGCCCGTCAATACCTCAACTGGTAGCCAGGTGAGCATCAACTTTACGGCGTCGATATATATCGTAGATGTAGATGCGAATTGTTGTGATAATTCTTCGTGGTGTGTGTCATCATCAGCATAATTCAATAATTAAGGCATGAATCACTGTTCGATTGCTCGAATGAATCTTCACTCCCATGATGTAATGCTGTATTCTAAAAAACAAAAGCAACCTTCTCATACCAACATAGAGATTTTACCTTGTTGTGCAATGTCCCTAGAGTGCTTTATTTTCTGATTTCCAACTTCTGTCCGAGGAATGGTTTCAGGAGGCATGTCAGTCAACTGATAACAACTCAAGAAGATCGGACAATCCTGCAATACGGAAGGGCTTGGATGGAGTCACAACTTCGCTTAATCAACATGGAGACACATTTGAAAAGAAATTCGAGGTAAGAATGGTGATGTTATTCTTTCTCCCATGAAACATTCCATTGCTTGGTTTTATTGTGTTCTCGTATCTTGTTTTCTTCTTGTCTCCAAGTTTGTTACTAATTTGCTAATTAGCTGACCACTGCTCAGATTGATGGACCCTTTTATACTTGAAAATATAGATTAGTAGTGACTTTTCAGCCTGACTTTGATTTTGCAAGATGGTGTAGTAAATCAGAATATTTCAAGAACCCTGTCTCAACTATATATTTGCATGGAAATTGTTAAATTACCACTAGACTCGGAGAGTATAAGTTGATAACTGGTGGTGAATTTAATTTTTATTCATATTTGTGGACTTGAAATTAGCACAAAATCCAACTAGTAGATTAATATATGAAACTGGAAGTAGATAGATGACACTACAGAAATTTGCATTCAAGACCTTCTGCCCTGTTCTACTCTCCTATCACGTTAAATTATCTCTAAACCATAGGTTCAAGTAAATAGGTTAAAAGGTAAATTTAATTTTAATTTTGACTTTCTAAATGGGTTCAGCTATATCATGGAATTGGTTTCTTAGTGAATGGATGTACGATTGTTTTGATCTACCATTTTCAACACCTCAACTTGTTTGCAGGAAGGTCGCAAAATTGTGGAAACTAAGACTGCAGACATCGTTCAAGAAACTCGCAAGCTGCAGATTAGGAAAAAGGGTAACAATTCTGAAGCATTACATCAAACTCCTGTGAATAATTCATGGCAGCAACCGGATATGCAATCTACAGAACCAAATATGCAAACACACCATGAAACTCAACTGAAGGCATCTCGAGACGTAAGGTGCCAACTATGTAATTATGTATCGTAATGCTACTATTGGAGTTCTCTCCTTTTCAGTTTTCTTTTCTCTTTTTCTCTAACGAATCGAAGCCAAACTGGTTGGCTTGAGTCATTAACTTGGCTAAGTTTGCTCTTACAAAGTAAGTAGCCTGGTTTACATATCTCTTCTTCACAGCTTAGTGCGAAGTTTTCTTTTCTGCAAAAGGAATTGATAGATTAACAATGTCTGTCCTAGAGTAGTATGCAATGGAAATGTCTGTCTTCTAAAGTAGTATTCAATTTGGGTATCTGATTTCATTCATACTAGCTTGAAATTTCGTACAAAAATTACCTATTGGGTGGTGGAGTTCATCAATGGCTTTCTCTTGGGCTACAGGTGGCGATGGCGACAGCTGCCAAAGCCAAACTATTGCTTCGGGAGCTGAAAACCGTTAAAGCAGAACTGACTTTTGCTAAAGAAAGATGTGCACAATTAGAGGAAGAAAACAAAATCATCCGGGAAAATCGCGAGAAGGGAGACAATCGTGCAGACGATGACTTGGTAATCTTACTTTCCTCTCTCAGTTACCGCACAGAATGTTTAAGACAATAACATCCATTTAAAAACAGAAAATACTTGGCCCGTAAGGTCTAATAAGTGTCGTCCTCGACACCATTCAAAAATTTACAATTCATTATTTTCTAAAAAAAAAAGTATTTATTTTTGCATTTCGAACAATATTTTTTTTTTCTTGGATACAAGAAGTGGGGGTGGGTAGATTCGAACTCATGACATATTGGTCAGAGACTAGTGTCAATTACTGTTGAGCTAAACTCATATTAATGTGGTGAGGAAAAGATTGTTTCTTACCGTATTTAAAAACTCATTGTTGTAGCTGTAACATTATTTTGATTGATCATTAATACAAAAAGGCTGTTTCCAATACCAGATTCGGCTTCAACTGGAGACTCTTTTGGCTGAGAAGGCTCGTCTGGCGCATGAGAACTCAATATATGCTCGGGAGAACCGTTTCCTGAGGGAAATTGTGGAGTACCATCAACTGACGATGCAGGATCTTGTTTATTTGGATGAGGGAACCGAAGAAGTGACAGAAGTGTATCCCATATCCACCTCTCCAGGGATCGCCAGAATGCTGTCTGTTTCCCCACGCTCCCCAATCTCTCCAGCCTCACTTTCATCTCTCAGTGAGACCCCAAAAGAAGCAGAGAATGATGATGCCAAACACAGTGATGGAGACCCAACTCCTGAGGAAGAACAAGGTACAAAAAGAGCCCCTTTGCCTTCTACTTCTTCC

mRNA sequence

ATGGCGTATAGGAGGAGGCAAGGAATCACGAGGGCTTCCACTTTCAAAGAAGAGATTCATCATCCTCCCGAGGATTTCGATCACAATCCTATCTCTTCTTCTTCGTCTTCGTCTTCTTCTCTTGCCGCTCAGGCGATCCGAGATTCTTCGCATTCCTCTGCCTATGGCACCTCCGCTTTTGCCCCTGGCCATCTTCGATCCAAGAGTTTTGCTGGCGAGAATGTGGCATTCAAAAGTGAGTCTAAATCCGGGTTTTGGGGCGTACTGGCTCGGAAAGCTAAGGCCATTCTCGAAGAAGATACCGTAGCCATAGAAGATGAAATGGCCAGCACAAATAGTTTCCAGCCCGTCAATACCTCAACTGGTAGCCAGGAGGCATGTCAGTCAACTGATAACAACTCAAGAAGATCGGACAATCCTGCAATACGGAAGGGCTTGGATGGAGTCACAACTTCGCTTAATCAACATGGAGACACATTTGAAAAGAAATTCGAGGAAGGTCGCAAAATTGTGGAAACTAAGACTGCAGACATCGTTCAAGAAACTCGCAAGCTGCAGATTAGGAAAAAGGGTAACAATTCTGAAGCATTACATCAAACTCCTGTGAATAATTCATGGCAGCAACCGGATATGCAATCTACAGAACCAAATATGCAAACACACCATGAAACTCAACTGAAGGCATCTCGAGACGTGGCGATGGCGACAGCTGCCAAAGCCAAACTATTGCTTCGGGAGCTGAAAACCGTTAAAGCAGAACTGACTTTTGCTAAAGAAAGATGTGCACAATTAGAGGAAGAAAACAAAATCATCCGGGAAAATCGCGAGAAGGGAGACAATCGTGCAGACGATGACTTGATTCGGCTTCAACTGGAGACTCTTTTGGCTGAGAAGGCTCGTCTGGCGCATGAGAACTCAATATATGCTCGGGAGAACCGTTTCCTGAGGGAAATTGTGGAGTACCATCAACTGACGATGCAGGATCTTGTTTATTTGGATGAGGGAACCGAAGAAGTGACAGAAGTGTATCCCATATCCACCTCTCCAGGGATCGCCAGAATGCTGTCTGTTTCCCCACGCTCCCCAATCTCTCCAGCCTCACTTTCATCTCTCAGTGAGACCCCAAAAGAAGCAGAGAATGATGATGCCAAACACAGTGATGGAGACCCAACTCCTGAGGAAGAACAAGGTACAAAAAGAGCCCCTTTGCCTTCTACTTCTTCC

Coding sequence (CDS)

ATGGCGTATAGGAGGAGGCAAGGAATCACGAGGGCTTCCACTTTCAAAGAAGAGATTCATCATCCTCCCGAGGATTTCGATCACAATCCTATCTCTTCTTCTTCGTCTTCGTCTTCTTCTCTTGCCGCTCAGGCGATCCGAGATTCTTCGCATTCCTCTGCCTATGGCACCTCCGCTTTTGCCCCTGGCCATCTTCGATCCAAGAGTTTTGCTGGCGAGAATGTGGCATTCAAAAGTGAGTCTAAATCCGGGTTTTGGGGCGTACTGGCTCGGAAAGCTAAGGCCATTCTCGAAGAAGATACCGTAGCCATAGAAGATGAAATGGCCAGCACAAATAGTTTCCAGCCCGTCAATACCTCAACTGGTAGCCAGGAGGCATGTCAGTCAACTGATAACAACTCAAGAAGATCGGACAATCCTGCAATACGGAAGGGCTTGGATGGAGTCACAACTTCGCTTAATCAACATGGAGACACATTTGAAAAGAAATTCGAGGAAGGTCGCAAAATTGTGGAAACTAAGACTGCAGACATCGTTCAAGAAACTCGCAAGCTGCAGATTAGGAAAAAGGGTAACAATTCTGAAGCATTACATCAAACTCCTGTGAATAATTCATGGCAGCAACCGGATATGCAATCTACAGAACCAAATATGCAAACACACCATGAAACTCAACTGAAGGCATCTCGAGACGTGGCGATGGCGACAGCTGCCAAAGCCAAACTATTGCTTCGGGAGCTGAAAACCGTTAAAGCAGAACTGACTTTTGCTAAAGAAAGATGTGCACAATTAGAGGAAGAAAACAAAATCATCCGGGAAAATCGCGAGAAGGGAGACAATCGTGCAGACGATGACTTGATTCGGCTTCAACTGGAGACTCTTTTGGCTGAGAAGGCTCGTCTGGCGCATGAGAACTCAATATATGCTCGGGAGAACCGTTTCCTGAGGGAAATTGTGGAGTACCATCAACTGACGATGCAGGATCTTGTTTATTTGGATGAGGGAACCGAAGAAGTGACAGAAGTGTATCCCATATCCACCTCTCCAGGGATCGCCAGAATGCTGTCTGTTTCCCCACGCTCCCCAATCTCTCCAGCCTCACTTTCATCTCTCAGTGAGACCCCAAAAGAAGCAGAGAATGATGATGCCAAACACAGTGATGGAGACCCAACTCCTGAGGAAGAACAAGGTACAAAAAGAGCCCCTTTGCCTTCTACTTCTTCC

Protein sequence

MAYRRRQGITRASTFKEEIHHPPEDFDHNPISSSSSSSSSLAAQAIRDSSHSSAYGTSAFAPGHLRSKSFAGENVAFKSESKSGFWGVLARKAKAILEEDTVAIEDEMASTNSFQPVNTSTGSQEACQSTDNNSRRSDNPAIRKGLDGVTTSLNQHGDTFEKKFEEGRKIVETKTADIVQETRKLQIRKKGNNSEALHQTPVNNSWQQPDMQSTEPNMQTHHETQLKASRDVAMATAAKAKLLLRELKTVKAELTFAKERCAQLEEENKIIRENREKGDNRADDDLIRLQLETLLAEKARLAHENSIYARENRFLREIVEYHQLTMQDLVYLDEGTEEVTEVYPISTSPGIARMLSVSPRSPISPASLSSLSETPKEAENDDAKHSDGDPTPEEEQGTKRAPLPSTSS

Homology

[Close]

BLAST of MS013841.1 vs. NCBI nr
Match: XP_022156194.1 (uncharacterized protein LOC111023141 isoform X3 [Momordica charantia])

HSP 1 Score: 755.4 bits (1949), Expect = 2.6e-214
Identity = 406/408 (99.51%), Postives = 407/408 (99.75%), Query Frame = 0


Query: 1   MAYRRRQGITRASTFKEEIHHPPEDFDHNPISSSSSSSSSLAAQAIRDSSHSSAYGTSAF 60
           MAYRRRQGITRASTFKEEIHHPPEDFDHNPISSSSSSSSSLAAQAIRDSSHSSAYGTSAF
Sbjct: 1   MAYRRRQGITRASTFKEEIHHPPEDFDHNPISSSSSSSSSLAAQAIRDSSHSSAYGTSAF 60

Query: 61  APGHLRSKSFAGENVAFKSESKSGFWGVLARKAKAILEEDTVAIEDEMASTNSFQPVNTS 120
           APGHLRSKSFAGENVAFKSESKSGFWGVLARKAKAILEEDTVAIEDEMASTNSFQPVNTS
Sbjct: 61  APGHLRSKSFAGENVAFKSESKSGFWGVLARKAKAILEEDTVAIEDEMASTNSFQPVNTS 120

Query: 121 TGSQEACQSTDNNSRRSDNPAIRKGLDGVTTSLNQHGDTFEKKFEEGRKIVETKTADIVQ 180
           TGSQEACQSTDNNSRRSDNPAIRKGLDGVTTSLNQHGDTFEKKFEEGRKIVETKTADIVQ
Sbjct: 121 TGSQEACQSTDNNSRRSDNPAIRKGLDGVTTSLNQHGDTFEKKFEEGRKIVETKTADIVQ 180

Query: 181 ETRKLQIRKKGNNSEALHQTPVNNSWQQPDMQSTEPNMQTHHETQLKASRDVAMATAAKA 240
           ETRKLQIRKKGNNSEALHQTPVNNSWQQPDMQSTEPNMQTHHETQLKASRDVAMATAAKA
Sbjct: 181 ETRKLQIRKKGNNSEALHQTPVNNSWQQPDMQSTEPNMQTHHETQLKASRDVAMATAAKA 240

Query: 241 KLLLRELKTVKAELTFAKERCAQLEEENKIIRENREKGDNRADDDLIRLQLETLLAEKAR 300
           KLLLRELKTVKAELTFAKERCAQLEEENKIIRENREKGDNRADDDLIRLQLETLLAEKAR
Sbjct: 241 KLLLRELKTVKAELTFAKERCAQLEEENKIIRENREKGDNRADDDLIRLQLETLLAEKAR 300

Query: 301 LAHENSIYARENRFLREIVEYHQLTMQDLVYLDEGTEEVTEVYPISTSPGIARMLSVSPR 360
           LAHENSIYARENRFLREIVEYHQLTMQDLVYLDEGTE VTEVYP+STSPGIARMLSVSPR
Sbjct: 301 LAHENSIYARENRFLREIVEYHQLTMQDLVYLDEGTEVVTEVYPVSTSPGIARMLSVSPR 360

Query: 361 SPISPASLSSLSETPKEAENDDAKHSDGDPTPEEEQGTKRAPLPSTSS 409
           SPISPASLSSLSETPKEAENDDAKHSDGDPTPEEEQGTKRAPLPSTSS
Sbjct: 361 SPISPASLSSLSETPKEAENDDAKHSDGDPTPEEEQGTKRAPLPSTSS 408

[Close]

BLAST of MS013841.1 vs. NCBI nr
Match: XP_022156192.1 (uncharacterized protein LOC111023141 isoform X2 [Momordica charantia])

HSP 1 Score: 749.6 bits (1934), Expect = 1.4e-212
Identity = 406/412 (98.54%), Postives = 407/412 (98.79%), Query Frame = 0


Query: 1   MAYRRRQGITRASTFKEEIHHPPEDFDHNPISSSSSSSSSLAAQAIRDSSHSSAYGTSAF 60
           MAYRRRQGITRASTFKEEIHHPPEDFDHNPISSSSSSSSSLAAQAIRDSSHSSAYGTSAF
Sbjct: 1   MAYRRRQGITRASTFKEEIHHPPEDFDHNPISSSSSSSSSLAAQAIRDSSHSSAYGTSAF 60

Query: 61  APGHLRSKSFAGENVAFKSESKSGFWGVLARKAKAILEEDTVAIEDEMASTNSFQPVNTS 120
           APGHLRSKSFAGENVAFKSESKSGFWGVLARKAKAILEEDTVAIEDEMASTNSFQPVNTS
Sbjct: 61  APGHLRSKSFAGENVAFKSESKSGFWGVLARKAKAILEEDTVAIEDEMASTNSFQPVNTS 120

Query: 121 TGS----QEACQSTDNNSRRSDNPAIRKGLDGVTTSLNQHGDTFEKKFEEGRKIVETKTA 180
           TGS    QEACQSTDNNSRRSDNPAIRKGLDGVTTSLNQHGDTFEKKFEEGRKIVETKTA
Sbjct: 121 TGSQEWFQEACQSTDNNSRRSDNPAIRKGLDGVTTSLNQHGDTFEKKFEEGRKIVETKTA 180

Query: 181 DIVQETRKLQIRKKGNNSEALHQTPVNNSWQQPDMQSTEPNMQTHHETQLKASRDVAMAT 240
           DIVQETRKLQIRKKGNNSEALHQTPVNNSWQQPDMQSTEPNMQTHHETQLKASRDVAMAT
Sbjct: 181 DIVQETRKLQIRKKGNNSEALHQTPVNNSWQQPDMQSTEPNMQTHHETQLKASRDVAMAT 240

Query: 241 AAKAKLLLRELKTVKAELTFAKERCAQLEEENKIIRENREKGDNRADDDLIRLQLETLLA 300
           AAKAKLLLRELKTVKAELTFAKERCAQLEEENKIIRENREKGDNRADDDLIRLQLETLLA
Sbjct: 241 AAKAKLLLRELKTVKAELTFAKERCAQLEEENKIIRENREKGDNRADDDLIRLQLETLLA 300

Query: 301 EKARLAHENSIYARENRFLREIVEYHQLTMQDLVYLDEGTEEVTEVYPISTSPGIARMLS 360
           EKARLAHENSIYARENRFLREIVEYHQLTMQDLVYLDEGTE VTEVYP+STSPGIARMLS
Sbjct: 301 EKARLAHENSIYARENRFLREIVEYHQLTMQDLVYLDEGTEVVTEVYPVSTSPGIARMLS 360

Query: 361 VSPRSPISPASLSSLSETPKEAENDDAKHSDGDPTPEEEQGTKRAPLPSTSS 409
           VSPRSPISPASLSSLSETPKEAENDDAKHSDGDPTPEEEQGTKRAPLPSTSS
Sbjct: 361 VSPRSPISPASLSSLSETPKEAENDDAKHSDGDPTPEEEQGTKRAPLPSTSS 412

[Close]

BLAST of MS013841.1 vs. NCBI nr
Match: XP_022156191.1 (uncharacterized protein LOC111023141 isoform X1 [Momordica charantia])

HSP 1 Score: 748.0 bits (1930), Expect = 4.2e-212
Identity = 406/416 (97.60%), Postives = 407/416 (97.84%), Query Frame = 0


Query: 1   MAYRRRQGITRASTFKEEIHHPPEDFDHNPISSSSSSSSSLAAQAIRDSSHSSAYGTSAF 60
           MAYRRRQGITRASTFKEEIHHPPEDFDHNPISSSSSSSSSLAAQAIRDSSHSSAYGTSAF
Sbjct: 1   MAYRRRQGITRASTFKEEIHHPPEDFDHNPISSSSSSSSSLAAQAIRDSSHSSAYGTSAF 60

Query: 61  APGHLRSKSFAGENVAFKSESKSGFWGVLARKAKAILEEDTVAIEDEMASTNSFQPVNTS 120
           APGHLRSKSFAGENVAFKSESKSGFWGVLARKAKAILEEDTVAIEDEMASTNSFQPVNTS
Sbjct: 61  APGHLRSKSFAGENVAFKSESKSGFWGVLARKAKAILEEDTVAIEDEMASTNSFQPVNTS 120

Query: 121 TGS--------QEACQSTDNNSRRSDNPAIRKGLDGVTTSLNQHGDTFEKKFEEGRKIVE 180
           TGS        QEACQSTDNNSRRSDNPAIRKGLDGVTTSLNQHGDTFEKKFEEGRKIVE
Sbjct: 121 TGSQLLSEEWFQEACQSTDNNSRRSDNPAIRKGLDGVTTSLNQHGDTFEKKFEEGRKIVE 180

Query: 181 TKTADIVQETRKLQIRKKGNNSEALHQTPVNNSWQQPDMQSTEPNMQTHHETQLKASRDV 240
           TKTADIVQETRKLQIRKKGNNSEALHQTPVNNSWQQPDMQSTEPNMQTHHETQLKASRDV
Sbjct: 181 TKTADIVQETRKLQIRKKGNNSEALHQTPVNNSWQQPDMQSTEPNMQTHHETQLKASRDV 240

Query: 241 AMATAAKAKLLLRELKTVKAELTFAKERCAQLEEENKIIRENREKGDNRADDDLIRLQLE 300
           AMATAAKAKLLLRELKTVKAELTFAKERCAQLEEENKIIRENREKGDNRADDDLIRLQLE
Sbjct: 241 AMATAAKAKLLLRELKTVKAELTFAKERCAQLEEENKIIRENREKGDNRADDDLIRLQLE 300

Query: 301 TLLAEKARLAHENSIYARENRFLREIVEYHQLTMQDLVYLDEGTEEVTEVYPISTSPGIA 360
           TLLAEKARLAHENSIYARENRFLREIVEYHQLTMQDLVYLDEGTE VTEVYP+STSPGIA
Sbjct: 301 TLLAEKARLAHENSIYARENRFLREIVEYHQLTMQDLVYLDEGTEVVTEVYPVSTSPGIA 360

Query: 361 RMLSVSPRSPISPASLSSLSETPKEAENDDAKHSDGDPTPEEEQGTKRAPLPSTSS 409
           RMLSVSPRSPISPASLSSLSETPKEAENDDAKHSDGDPTPEEEQGTKRAPLPSTSS
Sbjct: 361 RMLSVSPRSPISPASLSSLSETPKEAENDDAKHSDGDPTPEEEQGTKRAPLPSTSS 416

[Close]

BLAST of MS013841.1 vs. NCBI nr
Match: XP_038882986.1 (uncharacterized protein LOC120074073 [Benincasa hispida] >XP_038883017.1 uncharacterized protein LOC120074094 [Benincasa hispida])

HSP 1 Score: 553.9 bits (1426), Expect = 1.2e-153
Identity = 322/431 (74.71%), Postives = 356/431 (82.60%), Query Frame = 0


Query: 1   MAYRRRQGITRASTFKEEIHHPPEDFDHNPISSSSSSSSSLAAQAI------RDSSHSSA 60
           MAYRRRQGITRASTFKEEIHH  ++FDHN ISSSSSSSSSLAAQAI      RDSS SSA
Sbjct: 1   MAYRRRQGITRASTFKEEIHHHSDEFDHNSISSSSSSSSSLAAQAIRASGAHRDSSLSSA 60

Query: 61  YG--TSAFAPGHLRSKSFAGENVAFKSESKSGFWGVLARKAKAILEEDTVAIEDEMASTN 120
            G  +S F+ GH+RSKSFAGE+V FKSESKSGFWGVLARKAKAILEED + IE+E   T+
Sbjct: 61  LGGSSSNFSAGHMRSKSFAGEHVTFKSESKSGFWGVLARKAKAILEEDDIPIEEE---TS 120

Query: 121 SFQPVNTSTGSQEACQSTDNNSRRSDNPAIRKGLDGVTTSLNQHGDTFEKKFEEGRKIVE 180
            FQ +NTST SQE CQSTD +S++SDNPA+RKGLD ++TSLNQ GDTFEK FEEGR IVE
Sbjct: 121 RFQSINTSTCSQEPCQSTDYDSKKSDNPAVRKGLDAISTSLNQLGDTFEKAFEEGRSIVE 180

Query: 181 TKTADIVQETRKLQIRKKGNNSEALHQTPVNNSWQQPDMQSTEPNMQTHHETQLKASRDV 240
           TKTADI+QETRKLQIRKKGNNSE L    +NN WQQP +QS EPNMQTHHETQLKASRDV
Sbjct: 181 TKTADIIQETRKLQIRKKGNNSEGLFPA-LNNPWQQPSIQSPEPNMQTHHETQLKASRDV 240

Query: 241 AMATAAKAKLLLRELKTVKAELTFAKERCAQLEEENKIIRENREKGDNRADDDLIRLQLE 300
           AMATAAKAKLLLRELKT+KA+L FAKERCAQLEEENKI+RENREKGDNRADDDLIRLQLE
Sbjct: 241 AMATAAKAKLLLRELKTMKADLAFAKERCAQLEEENKILRENREKGDNRADDDLIRLQLE 300

Query: 301 TLLAEKARLAHENSIYARENRFLREIVEYHQLTMQDLVYLDEGTEEVTEVYPISTSPGIA 360
           TLLAEKARLAHENSIYARENRFLREIVEYHQLT QD+VY DEG EEVTEVYPISTSP I 
Sbjct: 301 TLLAEKARLAHENSIYARENRFLREIVEYHQLTTQDVVYFDEGMEEVTEVYPISTSPEIT 360

Query: 361 RML--SVSPRSPI------SPASLSSLSETPKEAENDDAKHSDGDPTP-------EEEQG 409
           ++L  SVSPRSP       S A++  L   P + + D  K SDG P+P       EEE+G
Sbjct: 361 KILSSSVSPRSPTSTNSPSSAAAMEDLPVVPPKQDKDHHKRSDGHPSPTTVFEEEEEEEG 420

[Close]

BLAST of MS013841.1 vs. NCBI nr
Match: XP_008463299.1 (PREDICTED: uncharacterized protein LOC103501490 isoform X1 [Cucumis melo] >TYK06210.1 actin cytoskeleton-regulatory complex protein pan1 [Cucumis melo var. makuwa])

HSP 1 Score: 550.4 bits (1417), Expect = 1.3e-152
Identity = 323/435 (74.25%), Postives = 360/435 (82.76%), Query Frame = 0


Query: 1   MAYRRRQGITRASTFKEEIHHPPEDFDHNPISSSSSSSSSLAAQAIR------DSSHSSA 60
           MAYRRRQ ITRASTFKEEIH+P ++FDHN ISSSSSSSSSLAAQAIR      DSSHSSA
Sbjct: 1   MAYRRRQAITRASTFKEEIHYPSDEFDHNSISSSSSSSSSLAAQAIRASATHHDSSHSSA 60

Query: 61  Y--GTSAFAPGHLRSKSFAGENVAFKSESKSGFWGVLARKAKAILEEDTVAIEDEMASTN 120
           +   +S F+PGH+RSKSFAGENV FKSESKSGFWGVLARKAKAILEED +AIE+E    +
Sbjct: 61  FAGASSNFSPGHMRSKSFAGENV-FKSESKSGFWGVLARKAKAILEEDDIAIEEE---PS 120

Query: 121 SFQPVNTSTGSQEACQSTDNNSRRSDNPAIRKGLDGVTTSLNQHGDTFEKKFEEGRKIVE 180
            FQP+NTS  SQE CQST+ +S+++DNPAIRKGLD ++TSLNQ GDTFEK + EGR IVE
Sbjct: 121 RFQPINTSNRSQEPCQSTNCDSKKTDNPAIRKGLDAISTSLNQLGDTFEKAYGEGRTIVE 180

Query: 181 TKTADIVQETRKLQIRKKGNNSEALHQTPVNNSWQQPDMQSTEPNMQTHHETQLKASRDV 240
            KTADI+QETRKLQIRKKGNN+E L+   VNN WQQP++QS EPNMQTHHETQLKASRDV
Sbjct: 181 NKTADIIQETRKLQIRKKGNNTEGLYPA-VNNQWQQPNIQSPEPNMQTHHETQLKASRDV 240

Query: 241 AMATAAKAKLLLRELKTVKAELTFAKERCAQLEEENKIIRENREKGDNRADDDLIRLQLE 300
           AMATAAKAKLLLRELKT+KA+L FAKERCAQLEEENKI+RENREKGDNRADDDLIRLQLE
Sbjct: 241 AMATAAKAKLLLRELKTIKADLAFAKERCAQLEEENKILRENREKGDNRADDDLIRLQLE 300

Query: 301 TLLAEKARLAHENSIYARENRFLREIVEYHQLTMQDLVYLDEGTEEVTEVYPISTSPGIA 360
           TLLAEKARLAHENSIYARENRFLREIVEYHQLTMQD+VYLDEG EEVTEVYPISTSP I 
Sbjct: 301 TLLAEKARLAHENSIYARENRFLREIVEYHQLTMQDVVYLDEGMEEVTEVYPISTSPEIT 360

Query: 361 RML--SVSPRSPISPAS----LSSLSETPKEAENDDAKH---SDGDPT----------PE 409
           + L  SVSPRSP SP+S    L ++   P +++ D   H   SD  PT           E
Sbjct: 361 KTLSNSVSPRSPTSPSSPMEVLPAVPPPPIQSKQDKDHHDKDSDEHPTSSTTFSEEEEEE 420

[Close]

BLAST of MS013841.1 vs. ExPASy TrEMBL
Match: A0A6J1DSM6 (uncharacterized protein LOC111023141 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111023141 PE=4 SV=1)

HSP 1 Score: 755.4 bits (1949), Expect = 1.3e-214
Identity = 406/408 (99.51%), Postives = 407/408 (99.75%), Query Frame = 0


Query: 1   MAYRRRQGITRASTFKEEIHHPPEDFDHNPISSSSSSSSSLAAQAIRDSSHSSAYGTSAF 60
           MAYRRRQGITRASTFKEEIHHPPEDFDHNPISSSSSSSSSLAAQAIRDSSHSSAYGTSAF
Sbjct: 1   MAYRRRQGITRASTFKEEIHHPPEDFDHNPISSSSSSSSSLAAQAIRDSSHSSAYGTSAF 60

Query: 61  APGHLRSKSFAGENVAFKSESKSGFWGVLARKAKAILEEDTVAIEDEMASTNSFQPVNTS 120
           APGHLRSKSFAGENVAFKSESKSGFWGVLARKAKAILEEDTVAIEDEMASTNSFQPVNTS
Sbjct: 61  APGHLRSKSFAGENVAFKSESKSGFWGVLARKAKAILEEDTVAIEDEMASTNSFQPVNTS 120

Query: 121 TGSQEACQSTDNNSRRSDNPAIRKGLDGVTTSLNQHGDTFEKKFEEGRKIVETKTADIVQ 180
           TGSQEACQSTDNNSRRSDNPAIRKGLDGVTTSLNQHGDTFEKKFEEGRKIVETKTADIVQ
Sbjct: 121 TGSQEACQSTDNNSRRSDNPAIRKGLDGVTTSLNQHGDTFEKKFEEGRKIVETKTADIVQ 180

Query: 181 ETRKLQIRKKGNNSEALHQTPVNNSWQQPDMQSTEPNMQTHHETQLKASRDVAMATAAKA 240
           ETRKLQIRKKGNNSEALHQTPVNNSWQQPDMQSTEPNMQTHHETQLKASRDVAMATAAKA
Sbjct: 181 ETRKLQIRKKGNNSEALHQTPVNNSWQQPDMQSTEPNMQTHHETQLKASRDVAMATAAKA 240

Query: 241 KLLLRELKTVKAELTFAKERCAQLEEENKIIRENREKGDNRADDDLIRLQLETLLAEKAR 300
           KLLLRELKTVKAELTFAKERCAQLEEENKIIRENREKGDNRADDDLIRLQLETLLAEKAR
Sbjct: 241 KLLLRELKTVKAELTFAKERCAQLEEENKIIRENREKGDNRADDDLIRLQLETLLAEKAR 300

Query: 301 LAHENSIYARENRFLREIVEYHQLTMQDLVYLDEGTEEVTEVYPISTSPGIARMLSVSPR 360
           LAHENSIYARENRFLREIVEYHQLTMQDLVYLDEGTE VTEVYP+STSPGIARMLSVSPR
Sbjct: 301 LAHENSIYARENRFLREIVEYHQLTMQDLVYLDEGTEVVTEVYPVSTSPGIARMLSVSPR 360

Query: 361 SPISPASLSSLSETPKEAENDDAKHSDGDPTPEEEQGTKRAPLPSTSS 409
           SPISPASLSSLSETPKEAENDDAKHSDGDPTPEEEQGTKRAPLPSTSS
Sbjct: 361 SPISPASLSSLSETPKEAENDDAKHSDGDPTPEEEQGTKRAPLPSTSS 408

[Close]

BLAST of MS013841.1 vs. ExPASy TrEMBL
Match: A0A6J1DRD4 (uncharacterized protein LOC111023141 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023141 PE=4 SV=1)

HSP 1 Score: 749.6 bits (1934), Expect = 6.9e-213
Identity = 406/412 (98.54%), Postives = 407/412 (98.79%), Query Frame = 0


Query: 1   MAYRRRQGITRASTFKEEIHHPPEDFDHNPISSSSSSSSSLAAQAIRDSSHSSAYGTSAF 60
           MAYRRRQGITRASTFKEEIHHPPEDFDHNPISSSSSSSSSLAAQAIRDSSHSSAYGTSAF
Sbjct: 1   MAYRRRQGITRASTFKEEIHHPPEDFDHNPISSSSSSSSSLAAQAIRDSSHSSAYGTSAF 60

Query: 61  APGHLRSKSFAGENVAFKSESKSGFWGVLARKAKAILEEDTVAIEDEMASTNSFQPVNTS 120
           APGHLRSKSFAGENVAFKSESKSGFWGVLARKAKAILEEDTVAIEDEMASTNSFQPVNTS
Sbjct: 61  APGHLRSKSFAGENVAFKSESKSGFWGVLARKAKAILEEDTVAIEDEMASTNSFQPVNTS 120

Query: 121 TGS----QEACQSTDNNSRRSDNPAIRKGLDGVTTSLNQHGDTFEKKFEEGRKIVETKTA 180
           TGS    QEACQSTDNNSRRSDNPAIRKGLDGVTTSLNQHGDTFEKKFEEGRKIVETKTA
Sbjct: 121 TGSQEWFQEACQSTDNNSRRSDNPAIRKGLDGVTTSLNQHGDTFEKKFEEGRKIVETKTA 180

Query: 181 DIVQETRKLQIRKKGNNSEALHQTPVNNSWQQPDMQSTEPNMQTHHETQLKASRDVAMAT 240
           DIVQETRKLQIRKKGNNSEALHQTPVNNSWQQPDMQSTEPNMQTHHETQLKASRDVAMAT
Sbjct: 181 DIVQETRKLQIRKKGNNSEALHQTPVNNSWQQPDMQSTEPNMQTHHETQLKASRDVAMAT 240

Query: 241 AAKAKLLLRELKTVKAELTFAKERCAQLEEENKIIRENREKGDNRADDDLIRLQLETLLA 300
           AAKAKLLLRELKTVKAELTFAKERCAQLEEENKIIRENREKGDNRADDDLIRLQLETLLA
Sbjct: 241 AAKAKLLLRELKTVKAELTFAKERCAQLEEENKIIRENREKGDNRADDDLIRLQLETLLA 300

Query: 301 EKARLAHENSIYARENRFLREIVEYHQLTMQDLVYLDEGTEEVTEVYPISTSPGIARMLS 360
           EKARLAHENSIYARENRFLREIVEYHQLTMQDLVYLDEGTE VTEVYP+STSPGIARMLS
Sbjct: 301 EKARLAHENSIYARENRFLREIVEYHQLTMQDLVYLDEGTEVVTEVYPVSTSPGIARMLS 360

Query: 361 VSPRSPISPASLSSLSETPKEAENDDAKHSDGDPTPEEEQGTKRAPLPSTSS 409
           VSPRSPISPASLSSLSETPKEAENDDAKHSDGDPTPEEEQGTKRAPLPSTSS
Sbjct: 361 VSPRSPISPASLSSLSETPKEAENDDAKHSDGDPTPEEEQGTKRAPLPSTSS 412

[Close]

BLAST of MS013841.1 vs. ExPASy TrEMBL
Match: A0A6J1DU59 (uncharacterized protein LOC111023141 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023141 PE=4 SV=1)

HSP 1 Score: 748.0 bits (1930), Expect = 2.0e-212
Identity = 406/416 (97.60%), Postives = 407/416 (97.84%), Query Frame = 0


Query: 1   MAYRRRQGITRASTFKEEIHHPPEDFDHNPISSSSSSSSSLAAQAIRDSSHSSAYGTSAF 60
           MAYRRRQGITRASTFKEEIHHPPEDFDHNPISSSSSSSSSLAAQAIRDSSHSSAYGTSAF
Sbjct: 1   MAYRRRQGITRASTFKEEIHHPPEDFDHNPISSSSSSSSSLAAQAIRDSSHSSAYGTSAF 60

Query: 61  APGHLRSKSFAGENVAFKSESKSGFWGVLARKAKAILEEDTVAIEDEMASTNSFQPVNTS 120
           APGHLRSKSFAGENVAFKSESKSGFWGVLARKAKAILEEDTVAIEDEMASTNSFQPVNTS
Sbjct: 61  APGHLRSKSFAGENVAFKSESKSGFWGVLARKAKAILEEDTVAIEDEMASTNSFQPVNTS 120

Query: 121 TGS--------QEACQSTDNNSRRSDNPAIRKGLDGVTTSLNQHGDTFEKKFEEGRKIVE 180
           TGS        QEACQSTDNNSRRSDNPAIRKGLDGVTTSLNQHGDTFEKKFEEGRKIVE
Sbjct: 121 TGSQLLSEEWFQEACQSTDNNSRRSDNPAIRKGLDGVTTSLNQHGDTFEKKFEEGRKIVE 180

Query: 181 TKTADIVQETRKLQIRKKGNNSEALHQTPVNNSWQQPDMQSTEPNMQTHHETQLKASRDV 240
           TKTADIVQETRKLQIRKKGNNSEALHQTPVNNSWQQPDMQSTEPNMQTHHETQLKASRDV
Sbjct: 181 TKTADIVQETRKLQIRKKGNNSEALHQTPVNNSWQQPDMQSTEPNMQTHHETQLKASRDV 240

Query: 241 AMATAAKAKLLLRELKTVKAELTFAKERCAQLEEENKIIRENREKGDNRADDDLIRLQLE 300
           AMATAAKAKLLLRELKTVKAELTFAKERCAQLEEENKIIRENREKGDNRADDDLIRLQLE
Sbjct: 241 AMATAAKAKLLLRELKTVKAELTFAKERCAQLEEENKIIRENREKGDNRADDDLIRLQLE 300

Query: 301 TLLAEKARLAHENSIYARENRFLREIVEYHQLTMQDLVYLDEGTEEVTEVYPISTSPGIA 360
           TLLAEKARLAHENSIYARENRFLREIVEYHQLTMQDLVYLDEGTE VTEVYP+STSPGIA
Sbjct: 301 TLLAEKARLAHENSIYARENRFLREIVEYHQLTMQDLVYLDEGTEVVTEVYPVSTSPGIA 360

Query: 361 RMLSVSPRSPISPASLSSLSETPKEAENDDAKHSDGDPTPEEEQGTKRAPLPSTSS 409
           RMLSVSPRSPISPASLSSLSETPKEAENDDAKHSDGDPTPEEEQGTKRAPLPSTSS
Sbjct: 361 RMLSVSPRSPISPASLSSLSETPKEAENDDAKHSDGDPTPEEEQGTKRAPLPSTSS 416

[Close]

BLAST of MS013841.1 vs. ExPASy TrEMBL
Match: A0A5D3C4F3 (Actin cytoskeleton-regulatory complex protein pan1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287G00700 PE=4 SV=1)

HSP 1 Score: 550.4 bits (1417), Expect = 6.2e-153
Identity = 323/435 (74.25%), Postives = 360/435 (82.76%), Query Frame = 0


Query: 1   MAYRRRQGITRASTFKEEIHHPPEDFDHNPISSSSSSSSSLAAQAIR------DSSHSSA 60
           MAYRRRQ ITRASTFKEEIH+P ++FDHN ISSSSSSSSSLAAQAIR      DSSHSSA
Sbjct: 1   MAYRRRQAITRASTFKEEIHYPSDEFDHNSISSSSSSSSSLAAQAIRASATHHDSSHSSA 60

Query: 61  Y--GTSAFAPGHLRSKSFAGENVAFKSESKSGFWGVLARKAKAILEEDTVAIEDEMASTN 120
           +   +S F+PGH+RSKSFAGENV FKSESKSGFWGVLARKAKAILEED +AIE+E    +
Sbjct: 61  FAGASSNFSPGHMRSKSFAGENV-FKSESKSGFWGVLARKAKAILEEDDIAIEEE---PS 120

Query: 121 SFQPVNTSTGSQEACQSTDNNSRRSDNPAIRKGLDGVTTSLNQHGDTFEKKFEEGRKIVE 180
            FQP+NTS  SQE CQST+ +S+++DNPAIRKGLD ++TSLNQ GDTFEK + EGR IVE
Sbjct: 121 RFQPINTSNRSQEPCQSTNCDSKKTDNPAIRKGLDAISTSLNQLGDTFEKAYGEGRTIVE 180

Query: 181 TKTADIVQETRKLQIRKKGNNSEALHQTPVNNSWQQPDMQSTEPNMQTHHETQLKASRDV 240
            KTADI+QETRKLQIRKKGNN+E L+   VNN WQQP++QS EPNMQTHHETQLKASRDV
Sbjct: 181 NKTADIIQETRKLQIRKKGNNTEGLYPA-VNNQWQQPNIQSPEPNMQTHHETQLKASRDV 240

Query: 241 AMATAAKAKLLLRELKTVKAELTFAKERCAQLEEENKIIRENREKGDNRADDDLIRLQLE 300
           AMATAAKAKLLLRELKT+KA+L FAKERCAQLEEENKI+RENREKGDNRADDDLIRLQLE
Sbjct: 241 AMATAAKAKLLLRELKTIKADLAFAKERCAQLEEENKILRENREKGDNRADDDLIRLQLE 300

Query: 301 TLLAEKARLAHENSIYARENRFLREIVEYHQLTMQDLVYLDEGTEEVTEVYPISTSPGIA 360
           TLLAEKARLAHENSIYARENRFLREIVEYHQLTMQD+VYLDEG EEVTEVYPISTSP I 
Sbjct: 301 TLLAEKARLAHENSIYARENRFLREIVEYHQLTMQDVVYLDEGMEEVTEVYPISTSPEIT 360

Query: 361 RML--SVSPRSPISPAS----LSSLSETPKEAENDDAKH---SDGDPT----------PE 409
           + L  SVSPRSP SP+S    L ++   P +++ D   H   SD  PT           E
Sbjct: 361 KTLSNSVSPRSPTSPSSPMEVLPAVPPPPIQSKQDKDHHDKDSDEHPTSSTTFSEEEEEE 420

[Close]

BLAST of MS013841.1 vs. ExPASy TrEMBL
Match: A0A1S3CJA7 (uncharacterized protein LOC103501490 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501490 PE=4 SV=1)

HSP 1 Score: 550.4 bits (1417), Expect = 6.2e-153
Identity = 323/435 (74.25%), Postives = 360/435 (82.76%), Query Frame = 0


Query: 1   MAYRRRQGITRASTFKEEIHHPPEDFDHNPISSSSSSSSSLAAQAIR------DSSHSSA 60
           MAYRRRQ ITRASTFKEEIH+P ++FDHN ISSSSSSSSSLAAQAIR      DSSHSSA
Sbjct: 1   MAYRRRQAITRASTFKEEIHYPSDEFDHNSISSSSSSSSSLAAQAIRASATHHDSSHSSA 60

Query: 61  Y--GTSAFAPGHLRSKSFAGENVAFKSESKSGFWGVLARKAKAILEEDTVAIEDEMASTN 120
           +   +S F+PGH+RSKSFAGENV FKSESKSGFWGVLARKAKAILEED +AIE+E    +
Sbjct: 61  FAGASSNFSPGHMRSKSFAGENV-FKSESKSGFWGVLARKAKAILEEDDIAIEEE---PS 120

Query: 121 SFQPVNTSTGSQEACQSTDNNSRRSDNPAIRKGLDGVTTSLNQHGDTFEKKFEEGRKIVE 180
            FQP+NTS  SQE CQST+ +S+++DNPAIRKGLD ++TSLNQ GDTFEK + EGR IVE
Sbjct: 121 RFQPINTSNRSQEPCQSTNCDSKKTDNPAIRKGLDAISTSLNQLGDTFEKAYGEGRTIVE 180

Query: 181 TKTADIVQETRKLQIRKKGNNSEALHQTPVNNSWQQPDMQSTEPNMQTHHETQLKASRDV 240
            KTADI+QETRKLQIRKKGNN+E L+   VNN WQQP++QS EPNMQTHHETQLKASRDV
Sbjct: 181 NKTADIIQETRKLQIRKKGNNTEGLYPA-VNNQWQQPNIQSPEPNMQTHHETQLKASRDV 240

Query: 241 AMATAAKAKLLLRELKTVKAELTFAKERCAQLEEENKIIRENREKGDNRADDDLIRLQLE 300
           AMATAAKAKLLLRELKT+KA+L FAKERCAQLEEENKI+RENREKGDNRADDDLIRLQLE
Sbjct: 241 AMATAAKAKLLLRELKTIKADLAFAKERCAQLEEENKILRENREKGDNRADDDLIRLQLE 300

Query: 301 TLLAEKARLAHENSIYARENRFLREIVEYHQLTMQDLVYLDEGTEEVTEVYPISTSPGIA 360
           TLLAEKARLAHENSIYARENRFLREIVEYHQLTMQD+VYLDEG EEVTEVYPISTSP I 
Sbjct: 301 TLLAEKARLAHENSIYARENRFLREIVEYHQLTMQDVVYLDEGMEEVTEVYPISTSPEIT 360

Query: 361 RML--SVSPRSPISPAS----LSSLSETPKEAENDDAKH---SDGDPT----------PE 409
           + L  SVSPRSP SP+S    L ++   P +++ D   H   SD  PT           E
Sbjct: 361 KTLSNSVSPRSPTSPSSPMEVLPAVPPPPIQSKQDKDHHDKDSDEHPTSSTTFSEEEEEE 420

[Close]

BLAST of MS013841.1 vs. TAIR 10
Match: AT5G01970.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G30050.1); Has 240 Blast hits to 236 proteins in 72 species: Archae - 0; Bacteria - 15; Metazoa - 51; Fungi - 19; Plants - 119; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). )

HSP 1 Score: 306.2 bits (783), Expect = 3.9e-83
Identity = 202/385 (52.47%), Postives = 254/385 (65.97%), Query Frame = 0


Query: 1   MAYRRRQGITRASTFKEEIHH-PPEDFDHNPISSSSSSSSSLAAQAIRDSSHSSAYGTSA 60
           MAYRRRQGI + +TFKEE+   PPE                 +  A++D S  +    + 
Sbjct: 1   MAYRRRQGIGKFATFKEEVDRLPPE-----------------SITAVKDRSPPARSSPAF 60

Query: 61  FAPGHLRSKSFAGENVAFKSESKSGFWGVLARKAKAILEEDTVAIEDEMASTNSFQPVNT 120
             P   RSK+F  E          G WGV+A+KAK+++E+D  +     AS + F  +  
Sbjct: 61  DQP---RSKNFTTE--------PKGLWGVIAQKAKSVIEDDKSSDRSTTASQSRFSYL-- 120

Query: 121 STGSQEACQSTDNNSRRSDNPAIRKGLDGVTTSLNQHGDTFEKKFEEGRKIVETKTADIV 180
                     +D   ++ DNP +R+GLD +T+SLNQ GDTFEK FE+GR +VE KTADI+
Sbjct: 121 ----------SDEGFKKMDNPKLRRGLDKLTSSLNQIGDTFEKAFEDGRTLVENKTADII 180

Query: 181 QETRKLQIRKKGNNSEALHQTP---VNNSWQQPDMQSTEPNMQTHHETQLKASRDVAMAT 240
           QETRKLQ R++G   E  +Q     V++SW++   Q  + N    HETQLKASRDVAMAT
Sbjct: 181 QETRKLQTRRRGTGGEDENQNQSYGVSSSWKKSPEQPMQLN-HIEHETQLKASRDVAMAT 240

Query: 241 AAKAKLLLRELKTVKAELTFAKERCAQLEEENKIIRE-NREKGDNRADDDLIRLQLETLL 300
           AAKAKLLLRELKTVKA+L FAKERCAQLEEENK +RE +REKG N AD+DLIRLQLE+LL
Sbjct: 241 AAKAKLLLRELKTVKADLAFAKERCAQLEEENKHLRESHREKGSNPADEDLIRLQLESLL 300

Query: 301 AEKARLAHENSIYARENRFLREIVEYHQLTMQDLVYLDEGTEEVTEVYPISTSPGIARML 360
           AEKARLAHENS+YARENRFLREIVEYHQLTMQD+VY+DEG+EEVT+V     SP ++ ++
Sbjct: 301 AEKARLAHENSVYARENRFLREIVEYHQLTMQDVVYIDEGSEEVTQV-----SPFVSTLM 339

Query: 361 SVSPRS-PISPASLSSLSETPKEAE 380
           + SP     SP S   + E    AE
Sbjct: 361 TSSPADRSQSPPSQEMIKEMLVVAE 339

[Close]

BLAST of MS013841.1 vs. TAIR 10
Match: AT1G30050.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01970.1); Has 246 Blast hits to 244 proteins in 61 species: Archae - 0; Bacteria - 8; Metazoa - 78; Fungi - 10; Plants - 117; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). )

HSP 1 Score: 302.4 bits (773), Expect = 5.6e-82
Identity = 218/395 (55.19%), Postives = 257/395 (65.06%), Query Frame = 0


Query: 1   MAYRRRQGITRASTFKEEIHHPPEDFDHNPI-----------SSSSSSSSSLAAQAIRDS 60
           MAYRRRQGITRASTFKE+I+H P D DH  +           S S SS SSLAAQAIR S
Sbjct: 1   MAYRRRQGITRASTFKEDIYHQPPDPDHGDLKGHSNGGSFRSSQSFSSHSSLAAQAIRAS 60

Query: 61  SHSSAYGTSAFAPGHLRSKSFAGENVAFKSESKSGFWGVLARKAKAILEEDTVAIEDEMA 120
             S A G +A+                 KSES+ GFWG+LA+KAK+ILE+     E+E  
Sbjct: 61  --SQAQGFTAYED---------------KSESR-GFWGILAQKAKSILED-----EEE-- 120

Query: 121 STNSFQPVNTSTGSQEACQSTDNNSRRSDNPAIRKGLDGVTTSLNQHGDTFEKKFEEGRK 180
                         Q+  Q  ++      NP IRK +D +TTSLN  GD+FEK FEEGR 
Sbjct: 121 -------------QQQQQQQQNDVIFEPSNPTIRKSIDKITTSLNHIGDSFEKAFEEGRT 180

Query: 181 IVETKTADIVQETRKLQIRKKG-----NNSEALHQTPVNNSWQQPDMQSTEPNMQTHHET 240
           IV +            QIR+KG     +++   HQ+  ++S  QP    T+PN +   E+
Sbjct: 181 IVAS------------QIRRKGSDLIDSDNNNYHQSSGSSSPWQP---LTQPNPR---ES 240

Query: 241 QLKASRDVAMATAAKAKLLLRELKTVKAELTFAKERCAQLEEENKIIRENREKGDNR-AD 300
           QLKASRDVAMATAAKAKLLLRELKTVKA+L FAKERC+QLEEENK +R+NR+KG+N  AD
Sbjct: 241 QLKASRDVAMATAAKAKLLLRELKTVKADLAFAKERCSQLEEENKRLRDNRDKGNNNPAD 300

Query: 301 DDLIRLQLETLLAEKARLAHENSIYARENRFLREIVEYHQLTMQDLVYLDEGTEEVTEVY 360
           DDLIRLQLETLLAEKARLAHENSIYARENRFLREIVEYHQLTMQD+VY+DEG EEV EV 
Sbjct: 301 DDLIRLQLETLLAEKARLAHENSIYARENRFLREIVEYHQLTMQDVVYIDEGIEEVAEVN 338

Query: 361 PIST------SPGIARMLSVSPRSPISPASLSSLS 373
           P  T      S   + + S+SP SP SPAS S LS
Sbjct: 361 PSITRTLSMASYSASELPSISP-SPSSPASPSRLS 338

[Close]

BLAST of MS013841.1 vs. TAIR 10
Match: AT2G30530.1 (unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01970.1); Has 5513 Blast hits to 872 proteins in 154 species: Archae - 0; Bacteria - 30; Metazoa - 615; Fungi - 144; Plants - 149; Viruses - 12; Other Eukaryotes - 4563 (source: NCBI BLink). )

HSP 1 Score: 258.8 bits (660), Expect = 7.1e-69
Identity = 177/331 (53.47%), Postives = 217/331 (65.56%), Query Frame = 0


Query: 29  NPISSSSSSSSSLAAQAI------RDSSHSSAYGTSAFAPGHLRSKSF--AGENVAFKS- 88
           +P S+SSS++SSLAA+AI      RDSS SSAY + + AP     K    A E  + KS 
Sbjct: 42  SPSSASSSAASSLAAKAIRASSAHRDSSLSSAYSSPSSAPVPTPPKEVNKAYEYTSMKSL 101

Query: 89  -ESKSGFWGVLARKAKAILEEDTV-AIEDEMASTNSFQPVNTSTGSQEACQSTDNNSRRS 148
            E K GFWG LA KAKA L+ED    +           P  T++G++EA Q+     R+S
Sbjct: 102 NEPKRGFWGSLASKAKAFLDEDDPNQLPQSPKRMEQSIPSATTSGTKEAGQT----GRKS 161

Query: 149 DNPAIRKGLDGVTTSLNQHGDTFEKKFEEGRKIVETKTADIVQETRKLQIRKKGNNSEAL 208
           +NP++++ LD +T+SLN  G T     EEG   VE +TA I+QETRK +I+KK + +   
Sbjct: 162 ENPSLQRRLDAITSSLNYIGGTIGTVVEEGITAVENRTAGIIQETRK-KIKKKPSLTR-- 221

Query: 209 HQTPVNNSWQQPDMQSTEPNMQTHHETQLKASRDVAMATAAKAKLLLRELKTVKAELTFA 268
                             P +Q   E QLKASRDVAMA AAKAKLLLRELK VK++L FA
Sbjct: 222 --------------NQQNPEIQADLEIQLKASRDVAMAMAAKAKLLLRELKMVKSDLAFA 281

Query: 269 KERCAQLEEENKIIRENREKGDNRADDDLIRLQLETLLAEKARLAHENSIYARENRFLRE 328
           K+RCAQLEEENK++RENR       DDDL+RLQLETLLAEKARLAHENSIY REN +LR 
Sbjct: 282 KQRCAQLEEENKVLRENRSGDSQTDDDDLVRLQLETLLAEKARLAHENSIYTRENLYLRG 341

Query: 329 IVEYHQLTMQDLVYLDEGTEEVTEVYPISTS 349
           +VEYHQLTMQD+VY DE TEEVTEVYPI+ S
Sbjct: 342 VVEYHQLTMQDVVYFDEKTEEVTEVYPINVS 351

[Close]

BLAST of MS013841.1 vs. TAIR 10
Match: AT4G02800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01970.1); Has 3209 Blast hits to 2720 proteins in 308 species: Archae - 13; Bacteria - 213; Metazoa - 1207; Fungi - 247; Plants - 183; Viruses - 21; Other Eukaryotes - 1325 (source: NCBI BLink). )

HSP 1 Score: 112.5 bits (280), Expect = 8.2e-25
Identity = 86/273 (31.50%), Postives = 144/273 (52.75%), Query Frame = 0


Query: 69  SFAGENVAFKSESKSGFWGVLARKAKAILEEDTVAIEDEMASTNSFQPVNTSTGSQEACQ 128
           SF   + +    S    W  +  +   +LEE          ++ + +PV  +     A +
Sbjct: 27  SFDSSSPSVSPSSDKRLWSNVRNRVDVLLEE----------NSKNHKPVTNTI----AIE 86

Query: 129 STDNNSRRSDNPAIRKGLDGVTTSLNQHGDTFEKKFEEGRKIVETKT----------ADI 188
           S  +   ++D+  + KG D V+ +L+      +   +  R++ +  +          AD 
Sbjct: 87  SERSKRFKNDSMLLLKGFDSVSHTLSLLSSNLDNALQGVRELAKPPSYSEILHSNLKADQ 146

Query: 189 VQETRKL--QIRKKGNNSEALHQTPVNNSWQQPDMQSTEPNMQTHHETQLKASRDVAMAT 248
           +Q  +K   +  ++    +  H++ V    +Q +  S E   +      +K ++++A++ 
Sbjct: 147 IQRQQKEEDEEEEESKGKKRKHESDV----EQTEDSSNEEEKRPKERKIMKKAKNIAISM 206

Query: 249 AAKAKLLLRELKTVKAELTFAKERCAQLEEENKIIRENREKGDNRADDDLIRLQLETLLA 308
           AAKA  L RELKT+K++L+F +ERC  LEEENK +R+   KG    +DDL+RLQLE LLA
Sbjct: 207 AAKANSLARELKTIKSDLSFIQERCGLLEEENKRLRDGFVKGVRPEEDDLVRLQLEVLLA 266

Query: 309 EKARLAHENSIYARENRFLREIVEYHQLTMQDL 330
           EKARLA+EN+   REN+ L ++VEYHQ+T QDL
Sbjct: 267 EKARLANENANLVRENQCLHQMVEYHQITSQDL 281

The following BLAST results are available for this feature:

BLAST of MS013841.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156194.1	2.6e-214	99.51	uncharacterized protein LOC111023141 isoform X3 [Momordica charantia]	[more]
XP_022156192.1	1.4e-212	98.54	uncharacterized protein LOC111023141 isoform X2 [Momordica charantia]	[more]
XP_022156191.1	4.2e-212	97.60	uncharacterized protein LOC111023141 isoform X1 [Momordica charantia]	[more]
XP_038882986.1	1.2e-153	74.71	uncharacterized protein LOC120074073 [Benincasa hispida] >XP_038883017.1 unchara...	[more]
XP_008463299.1	1.3e-152	74.25	PREDICTED: uncharacterized protein LOC103501490 isoform X1 [Cucumis melo] >TYK06...	[more]

BLAST of MS013841.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS013841.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DSM6	1.3e-214	99.51	uncharacterized protein LOC111023141 isoform X3 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DRD4	6.9e-213	98.54	uncharacterized protein LOC111023141 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DU59	2.0e-212	97.60	uncharacterized protein LOC111023141 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A5D3C4F3	6.2e-153	74.25	Actin cytoskeleton-regulatory complex protein pan1 OS=Cucumis melo var. makuwa O...	[more]
A0A1S3CJA7	6.2e-153	74.25	uncharacterized protein LOC103501490 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of MS013841.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01970.1	3.9e-83	52.47	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G30050.1	5.6e-82	55.19	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G30530.1	7.1e-69	53.47	unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant ...	[more]
AT4G02800.1	8.2e-25	31.50	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 240..281
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 356..408
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 360..374
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..216
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 375..396
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..136
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..45
None	No IPR available	PANTHER	PTHR31016:SF12	HEAT-INDUCIBLE TRANSCRIPTION REPRESSOR-RELATED	coord: 1..378
None	No IPR available	PANTHER	PTHR31016	UNCHARACTERIZED	coord: 1..378

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS013841	MS013841	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS013841.1-cds	MS013841.1-cds-scaffold607:175548..175751	CDS
MS013841.1-cds	MS013841.1-cds-scaffold607:176172..176339	CDS
MS013841.1-cds	MS013841.1-cds-scaffold607:176620..176742	CDS
MS013841.1-cds	MS013841.1-cds-scaffold607:177363..177560	CDS
MS013841.1-cds	MS013841.1-cds-scaffold607:177942..178106	CDS
MS013841.1-cds	MS013841.1-cds-scaffold607:178495..178860	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS013841.1	MS013841.1-protein	polypeptide