MS013565.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS013565.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	heavy metal-associated isoprenylated plant protein 28-like
Location	scaffold402: 2481830 .. 2482437 (-)
Sequence length	462
RNA-Seq Expression	MS013565.1
Synteny	MS013565.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTGCCGGGGATGTGAAAAACAAATAAGGAAAGCTCTAGAAAATCTAGAAGGTACGTATTCAAAACTTAAGTAAATTTCTGTAATTCTAAACAATGGTATATTCAAAGTAGAAAATTTCAATTCCTTGGAATGATATATATTGTCGAGATATGTAAAGTATTGAAATCTTATATTATATACATATATGAATGATCAGGTGTGGACGATGTGATAATAGATTTGAGCATGCAGAAGGTGACTGTGATGGGATGGGCGGAGCAGAAGAAGGTTCTGAAGGCAGTGCGGCGGAATGGGCGGACGGCGGAGCTGTGGCCGTACCCTTATAACCCTCAATATCACGGTTTCATCCACCATTATCAATACCTTAACTCTCCTCAGCATCAGCCTCAAACTAAACCAGTCGTCACCTACAATTCACTGCCTTCCTCTTCATCACGCAAGCACAAGCTGACACAGGAGTATGATAGCAGCCACCACGACGCCAGCAGCAGCGGACTCGCTGCAGATTATGGCTATTATTACGAGACACCACCCTTTTCAACCATCGATGAAGATGTTGGTGCCATGTTCAGTGATGAGAACCCCCATTCTTGTTCTATTATG

mRNA sequence

ATGGACTGCCGGGGATGTGAAAAACAAATAAGGAAAGCTCTAGAAAATCTAGAAGGTGTGGACGATGTGATAATAGATTTGAGCATGCAGAAGGTGACTGTGATGGGATGGGCGGAGCAGAAGAAGGTTCTGAAGGCAGTGCGGCGGAATGGGCGGACGGCGGAGCTGTGGCCGTACCCTTATAACCCTCAATATCACGGTTTCATCCACCATTATCAATACCTTAACTCTCCTCAGCATCAGCCTCAAACTAAACCAGTCGTCACCTACAATTCACTGCCTTCCTCTTCATCACGCAAGCACAAGCTGACACAGGAGTATGATAGCAGCCACCACGACGCCAGCAGCAGCGGACTCGCTGCAGATTATGGCTATTATTACGAGACACCACCCTTTTCAACCATCGATGAAGATGTTGGTGCCATGTTCAGTGATGAGAACCCCCATTCTTGTTCTATTATG

Coding sequence (CDS)

ATGGACTGCCGGGGATGTGAAAAACAAATAAGGAAAGCTCTAGAAAATCTAGAAGGTGTGGACGATGTGATAATAGATTTGAGCATGCAGAAGGTGACTGTGATGGGATGGGCGGAGCAGAAGAAGGTTCTGAAGGCAGTGCGGCGGAATGGGCGGACGGCGGAGCTGTGGCCGTACCCTTATAACCCTCAATATCACGGTTTCATCCACCATTATCAATACCTTAACTCTCCTCAGCATCAGCCTCAAACTAAACCAGTCGTCACCTACAATTCACTGCCTTCCTCTTCATCACGCAAGCACAAGCTGACACAGGAGTATGATAGCAGCCACCACGACGCCAGCAGCAGCGGACTCGCTGCAGATTATGGCTATTATTACGAGACACCACCCTTTTCAACCATCGATGAAGATGTTGGTGCCATGTTCAGTGATGAGAACCCCCATTCTTGTTCTATTATG

Protein sequence

MDCRGCEKQIRKALENLEGVDDVIIDLSMQKVTVMGWAEQKKVLKAVRRNGRTAELWPYPYNPQYHGFIHHYQYLNSPQHQPQTKPVVTYNSLPSSSSRKHKLTQEYDSSHHDASSSGLAADYGYYYETPPFSTIDEDVGAMFSDENPHSCSIM

Homology

[Close]

BLAST of MS013565.1 vs. NCBI nr
Match: XP_022140251.1 (heavy metal-associated isoprenylated plant protein 28-like [Momordica charantia])

HSP 1 Score: 319.7 bits (818), Expect = 1.4e-83
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MDCRGCEKQIRKALENLEGVDDVIIDLSMQKVTVMGWAEQKKVLKAVRRNGRTAELWPYP 60
           MDCRGCEKQIRKALENLEGVDDVIIDLSMQKVTVMGWAEQKKVLKAVRRNGRTAELWPYP
Sbjct: 63  MDCRGCEKQIRKALENLEGVDDVIIDLSMQKVTVMGWAEQKKVLKAVRRNGRTAELWPYP 122

Query: 61  YNPQYHGFIHHYQYLNSPQHQPQTKPVVTYNSLPSSSSRKHKLTQEYDSSHHDASSSGLA 120
           YNPQYHGFIHHYQYLNSPQHQPQTKPVVTYNSLPSSSSRKHKLTQEYDSSHHDASSSGLA
Sbjct: 123 YNPQYHGFIHHYQYLNSPQHQPQTKPVVTYNSLPSSSSRKHKLTQEYDSSHHDASSSGLA 182

Query: 121 ADYGYYYETPPFSTIDEDVGAMFSDENPHSCSIM 155
           ADYGYYYETPPFSTIDEDVGAMFSDENPHSCSIM
Sbjct: 183 ADYGYYYETPPFSTIDEDVGAMFSDENPHSCSIM 216

[Close]

BLAST of MS013565.1 vs. NCBI nr
Match: KAG6583964.1 (Heavy metal-associated isoprenylated plant protein 28, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 233.0 bits (593), Expect = 1.7e-57
Identity = 120/165 (72.73%), Postives = 135/165 (81.82%), Query Frame = 0


Query: 1   MDCRGCEKQIRKALENLEGVDDVIIDLSMQKVTVMGWAEQKKVLKAVRRNGRTAELWPYP 60
           MDC GCEKQ+RKALE+L GVDDVIIDLS+QKVTVMGWA+QKK+LKA RRNGRTAELWPYP
Sbjct: 170 MDCTGCEKQVRKALESLPGVDDVIIDLSLQKVTVMGWAKQKKILKAARRNGRTAELWPYP 229

Query: 61  YNPQYHGFIHHYQ-YLNSPQH--------QPQTKPVVTYNSLPSSSSRKHKLT--QEYDS 120
           YNPQYHGFIHHYQ YLNSPQH        QPQTKP++TYNSL SSS  KH ++   EY+S
Sbjct: 230 YNPQYHGFIHHYQHYLNSPQHHHQPQPQPQPQTKPIITYNSLSSSSFHKHNMSPIHEYNS 289

Query: 121 SHHDASSSGLAADYGYYYETPPFSTIDEDVGAMFSDENPHSCSIM 155
            ++  S    A DYGY+ E PPFSTIDE+ GAMFSDENPHSC+IM
Sbjct: 290 YNYSGSD---ADDYGYHQE-PPFSTIDEEAGAMFSDENPHSCAIM 330

[Close]

BLAST of MS013565.1 vs. NCBI nr
Match: XP_023519213.1 (heavy metal-associated isoprenylated plant protein 28-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 232.6 bits (592), Expect = 2.2e-57
Identity = 120/165 (72.73%), Postives = 135/165 (81.82%), Query Frame = 0


Query: 1   MDCRGCEKQIRKALENLEGVDDVIIDLSMQKVTVMGWAEQKKVLKAVRRNGRTAELWPYP 60
           MDC GCEKQ+RKALE+L GVDDVIIDLS+QKVTVMGWA+QKK+LKA RRNGRTAELWPYP
Sbjct: 19  MDCTGCEKQVRKALESLPGVDDVIIDLSIQKVTVMGWAKQKKILKAARRNGRTAELWPYP 78

Query: 61  YNPQYHGFIHHYQ-YLNSPQH--------QPQTKPVVTYNSLPSSSSRKHKLT--QEYDS 120
           YNPQYHGFIHHYQ YLNSPQH        QPQTKP++TYNSL SSS  KH ++   EY+S
Sbjct: 79  YNPQYHGFIHHYQHYLNSPQHHHQPQPQPQPQTKPIITYNSLSSSSFHKHNMSPIHEYNS 138

Query: 121 SHHDASSSGLAADYGYYYETPPFSTIDEDVGAMFSDENPHSCSIM 155
            ++  S    A DYGY+ E PPFSTIDE+ GAMFSDENPHSC+IM
Sbjct: 139 YNYSGSD---ADDYGYHQE-PPFSTIDEEAGAMFSDENPHSCAIM 179

[Close]

BLAST of MS013565.1 vs. NCBI nr
Match: XP_023519214.1 (heavy metal-associated isoprenylated plant protein 29-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 232.6 bits (592), Expect = 2.2e-57
Identity = 120/165 (72.73%), Postives = 135/165 (81.82%), Query Frame = 0


Query: 1   MDCRGCEKQIRKALENLEGVDDVIIDLSMQKVTVMGWAEQKKVLKAVRRNGRTAELWPYP 60
           MDC GCEKQ+RKALE+L GVDDVIIDLS+QKVTVMGWA+QKK+LKA RRNGRTAELWPYP
Sbjct: 10  MDCTGCEKQVRKALESLPGVDDVIIDLSIQKVTVMGWAKQKKILKAARRNGRTAELWPYP 69

Query: 61  YNPQYHGFIHHYQ-YLNSPQH--------QPQTKPVVTYNSLPSSSSRKHKLT--QEYDS 120
           YNPQYHGFIHHYQ YLNSPQH        QPQTKP++TYNSL SSS  KH ++   EY+S
Sbjct: 70  YNPQYHGFIHHYQHYLNSPQHHHQPQPQPQPQTKPIITYNSLSSSSFHKHNMSPIHEYNS 129

Query: 121 SHHDASSSGLAADYGYYYETPPFSTIDEDVGAMFSDENPHSCSIM 155
            ++  S    A DYGY+ E PPFSTIDE+ GAMFSDENPHSC+IM
Sbjct: 130 YNYSGSD---ADDYGYHQE-PPFSTIDEEAGAMFSDENPHSCAIM 170

[Close]

BLAST of MS013565.1 vs. NCBI nr
Match: XP_038895306.1 (heavy metal-associated isoprenylated plant protein 28-like isoform X1 [Benincasa hispida])

HSP 1 Score: 231.5 bits (589), Expect = 4.9e-57
Identity = 122/168 (72.62%), Postives = 136/168 (80.95%), Query Frame = 0


Query: 1   MDCRGCEKQIRKALENLEGVDDVIIDLSMQKVTVMGWAEQKKVLKAVRRNGRTAELWPYP 60
           MDC GCEKQIRKALENLEGVDDVIIDLS QKVTVMGWA+QKK+LKAVRRNGRTAELWPYP
Sbjct: 25  MDCPGCEKQIRKALENLEGVDDVIIDLSTQKVTVMGWAKQKKILKAVRRNGRTAELWPYP 84

Query: 61  YNPQYHGFIHHYQ-YLNSPQH----------QPQTKPVVTYNSL-PSSSSRKHKLT--QE 120
           YNPQYHGF+HHYQ YLNSPQH          QPQ KP++TYNSL  SSSS KHK++   E
Sbjct: 85  YNPQYHGFLHHYQHYLNSPQHHHQPQPQPQPQPQAKPIITYNSLSSSSSSHKHKMSPIHE 144

Query: 121 YDSSHHDASSSGLAADYGYYYETPPFSTIDEDVGAMFSDENPHSCSIM 155
           Y  S+   + SG  A+YGYY E PPF+TIDE+  AMFSDENPHSC++M
Sbjct: 145 YAGSY---NYSGGGAEYGYYQE-PPFTTIDEEASAMFSDENPHSCAVM 188

[Close]

BLAST of MS013565.1 vs. ExPASy Swiss-Prot
Match: F4IC29 (Heavy metal-associated isoprenylated plant protein 28 OS=Arabidopsis thaliana OX=3702 GN=HIPP28 PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 4.1e-22
Identity = 67/162 (41.36%), Postives = 88/162 (54.32%), Query Frame = 0


Query: 1   MDCRGCEKQIRKALENLEGVDDVIIDLSMQKVTVMGWAEQKKVLKAVRRNGRTAELWPYP 60
           MDC GCE +++ AL+ + GVD V ID+  QKVTV G+A+QKKVLK VR+ GR AELW  P
Sbjct: 19  MDCVGCESRVKNALQKMRGVDAVEIDMVQQKVTVTGYADQKKVLKKVRKTGRRAELWQLP 78

Query: 61  YNPQY-------HGFIHHYQYLNSPQHQPQTKPVVTYNSLPSSSSRKHKLTQEYDSSHHD 120
           YNP +        G+ ++ Q  N P +     P  +YN        KH     YDS+   
Sbjct: 79  YNPDHMGGSSSNGGYFYNPQGCNGPINHAAPVPTSSYNYY------KH----GYDSN--- 138

Query: 121 ASSSGLAADYGYYYETPPFSTI-DEDVGAMFSDENPHSCSIM 155
                   DY  Y   P  ++I     G+ FSDENP++CSIM
Sbjct: 139 --------DYSSYRHHPVHASIFSHQTGSKFSDENPNACSIM 159

[Close]

BLAST of MS013565.1 vs. ExPASy Swiss-Prot
Match: B3H6D0 (Heavy metal-associated isoprenylated plant protein 45 OS=Arabidopsis thaliana OX=3702 GN=HIPP45 PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 2.9e-20
Identity = 58/156 (37.18%), Postives = 90/156 (57.69%), Query Frame = 0


Query: 1   MDCRGCEKQIRKALENLEGVDDVIIDLSMQKVTVMGWAEQKKVLKAVRRNGRTAELWPYP 60
           MDC+GCEK++R+A+  L+GVD V ID+  QKVTV G+ ++++VLK V+R GRTAE WP+P
Sbjct: 24  MDCKGCEKKVRRAISKLDGVDTVEIDVDRQKVTVTGYVDREEVLKMVKRTGRTAEYWPFP 83

Query: 61  YNPQYHGFIHHYQYLNSPQHQPQTKPVVTYNSLPSSSSRKHKLTQEYDSSHHDASSSGLA 120
           YN  Y  +     Y    QH  Q+   + Y ++  S         ++ ++++   +    
Sbjct: 84  YNGYYGDY-----YTYPSQHLEQSDQKI-YQTISYSGKYDFYDVDDFQNTNNSTIN---- 143

Query: 121 ADYGYYYETPP--FSTIDEDVGAMFSDENPHSCSIM 155
              GYY  +       IDE+   +FSD+N H+C+IM
Sbjct: 144 ---GYYPSSSQKVQPNIDENALHLFSDDNAHACTIM 166

[Close]

BLAST of MS013565.1 vs. ExPASy Swiss-Prot
Match: Q9LP41 (Heavy metal-associated isoprenylated plant protein 29 OS=Arabidopsis thaliana OX=3702 GN=HIPP29 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.1e-19
Identity = 63/155 (40.65%), Postives = 84/155 (54.19%), Query Frame = 0


Query: 1   MDCRGCEKQIRKALENLEGVDDVIIDLSMQKVTVMGWAEQKKVLKAVRR-NGRTAELWPY 60
           MDC GCE ++RKALE + GV DV ID+  Q+VTV G AEQKKVLK  R    R   LW Y
Sbjct: 5   MDCPGCENKVRKALEKMNGVHDVQIDIKQQRVTVTGSAEQKKVLKVARNVTKRDICLWSY 64

Query: 61  PYNPQYHGFIHHYQYLNSPQHQPQTKPVVTYNSLPSSSSRKHKLTQEYDSSHHDASSSGL 120
           PY+P+ +G+   Y      + + + +  ++ N    SS   HK        +H       
Sbjct: 65  PYHPESNGYNDRYF-----KKKFRKRINMSVNGEKVSSYNYHK------HGYH------- 124

Query: 121 AADYGYYYETPPFSTIDEDVGAMFSDENPHSCSIM 155
             ++GYY E P    I+    +MFS+ENPH CSIM
Sbjct: 125 GHEHGYYQERPYSGLINPSASSMFSEENPHFCSIM 141

[Close]

BLAST of MS013565.1 vs. ExPASy Swiss-Prot
Match: Q84K70 (Heavy metal-associated isoprenylated plant protein 31 OS=Arabidopsis thaliana OX=3702 GN=HIPP31 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.7e-15
Identity = 57/159 (35.85%), Postives = 81/159 (50.94%), Query Frame = 0


Query: 1   MDCRGCEKQIRKALENLEGVDDVIIDLSMQKVTVMGW-AEQKKVLKAVRRNGRTAELWPY 60
           +DC GC  ++RK L  L+GV++V +++  QKVT  G+  E+KKVLKAVRR G+ AELWPY
Sbjct: 12  LDCEGCASKLRKTLLKLKGVEEVEVEMETQKVTARGYRLEEKKVLKAVRRAGKAAELWPY 71

Query: 61  PYNPQYHGFIHHYQYLNSPQHQPQTKPVVTYNSLPSSSSRKHKLTQEYDSSHHDASSSGL 120
                +  F   Y+Y                   PS       +T  Y S  H    +G 
Sbjct: 72  RLGNSH--FASFYKY-------------------PS------YVTNHYYSDAHRTDPTG- 131

Query: 121 AADYGYYYETPPFSTI----DEDVGAMFSDENPHSCSIM 155
                 ++ TP   ++    DE   +MFSD+NPH+C+IM
Sbjct: 132 --GVHTFFHTPADYSVAVAGDEIAASMFSDDNPHACTIM 140

[Close]

BLAST of MS013565.1 vs. ExPASy Swiss-Prot
Match: F4IQG4 (Heavy metal-associated isoprenylated plant protein 30 OS=Arabidopsis thaliana OX=3702 GN=HIPP30 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 6.3e-15
Identity = 51/154 (33.12%), Postives = 77/154 (50.00%), Query Frame = 0


Query: 1   MDCRGCEKQIRKALENLEGVDDVIIDLSMQKVTVMGWAEQKKVLKAVRRNGRTAELWPYP 60
           M C GCE+ ++ A+  L GVD V ++L M++VTV+G+ E+KKVLKAVRR G+ AE WPYP
Sbjct: 54  MCCSGCERVVKHAIYKLRGVDSVEVNLEMERVTVVGYVERKKVLKAVRRAGKRAEFWPYP 113

Query: 61  YNPQYHGFIHHYQYLNSPQHQPQTKPVVTYNSLPSSSSRKHKLTQEYDSSHHDASSSGLA 120
             P+Y     HY                             +  + Y+   H      L+
Sbjct: 114 DMPRYFTSSDHY-----------------------FKDTTREFRESYNYYRH---GYNLS 173

Query: 121 ADYGYYYETPPFSTIDEDVGAMFSDENPHSCSIM 155
             +G  + T   +  D+ +   F+D+N H+CS+M
Sbjct: 174 DRHGNIHVT---NRGDDKMSNFFNDDNVHACSLM 178

[Close]

BLAST of MS013565.1 vs. ExPASy TrEMBL
Match: A0A6J1CFI8 (heavy metal-associated isoprenylated plant protein 28-like OS=Momordica charantia OX=3673 GN=LOC111010963 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 6.7e-84
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MDCRGCEKQIRKALENLEGVDDVIIDLSMQKVTVMGWAEQKKVLKAVRRNGRTAELWPYP 60
           MDCRGCEKQIRKALENLEGVDDVIIDLSMQKVTVMGWAEQKKVLKAVRRNGRTAELWPYP
Sbjct: 63  MDCRGCEKQIRKALENLEGVDDVIIDLSMQKVTVMGWAEQKKVLKAVRRNGRTAELWPYP 122

Query: 61  YNPQYHGFIHHYQYLNSPQHQPQTKPVVTYNSLPSSSSRKHKLTQEYDSSHHDASSSGLA 120
           YNPQYHGFIHHYQYLNSPQHQPQTKPVVTYNSLPSSSSRKHKLTQEYDSSHHDASSSGLA
Sbjct: 123 YNPQYHGFIHHYQYLNSPQHQPQTKPVVTYNSLPSSSSRKHKLTQEYDSSHHDASSSGLA 182

Query: 121 ADYGYYYETPPFSTIDEDVGAMFSDENPHSCSIM 155
           ADYGYYYETPPFSTIDEDVGAMFSDENPHSCSIM
Sbjct: 183 ADYGYYYETPPFSTIDEDVGAMFSDENPHSCSIM 216

[Close]

BLAST of MS013565.1 vs. ExPASy TrEMBL
Match: A0A6J1EGT2 (heavy metal-associated isoprenylated plant protein 28-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433972 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.2e-56
Identity = 120/165 (72.73%), Postives = 135/165 (81.82%), Query Frame = 0


Query: 1   MDCRGCEKQIRKALENLEGVDDVIIDLSMQKVTVMGWAEQKKVLKAVRRNGRTAELWPYP 60
           MDC GCEKQ+RKALE+L GVDDVIIDLS+QKVTVMGWA+QKK+LKA RRNGRTAELWPYP
Sbjct: 21  MDCTGCEKQVRKALESLPGVDDVIIDLSLQKVTVMGWAKQKKILKAARRNGRTAELWPYP 80

Query: 61  YNPQYHGFIHHYQ-YLNSPQH--------QPQTKPVVTYNSLPSSSSRKHKLT--QEYDS 120
           YNPQYHGFIHHYQ YLNSPQH        QPQTKP++TYNSL SSS  KH ++   EY+S
Sbjct: 81  YNPQYHGFIHHYQHYLNSPQHHHQPQPQPQPQTKPIITYNSL-SSSFHKHNMSPIHEYNS 140

Query: 121 SHHDASSSGLAADYGYYYETPPFSTIDEDVGAMFSDENPHSCSIM 155
            ++  S    A DYGY+ E PPFSTIDE+ GAMFSDENPHSC+IM
Sbjct: 141 YNYSGSD---ADDYGYHQE-PPFSTIDEEAGAMFSDENPHSCAIM 180

[Close]

BLAST of MS013565.1 vs. ExPASy TrEMBL
Match: A0A6J1EGI2 (heavy metal-associated isoprenylated plant protein 28-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111433972 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.2e-56
Identity = 120/165 (72.73%), Postives = 135/165 (81.82%), Query Frame = 0


Query: 1   MDCRGCEKQIRKALENLEGVDDVIIDLSMQKVTVMGWAEQKKVLKAVRRNGRTAELWPYP 60
           MDC GCEKQ+RKALE+L GVDDVIIDLS+QKVTVMGWA+QKK+LKA RRNGRTAELWPYP
Sbjct: 10  MDCTGCEKQVRKALESLPGVDDVIIDLSLQKVTVMGWAKQKKILKAARRNGRTAELWPYP 69

Query: 61  YNPQYHGFIHHYQ-YLNSPQH--------QPQTKPVVTYNSLPSSSSRKHKLT--QEYDS 120
           YNPQYHGFIHHYQ YLNSPQH        QPQTKP++TYNSL SSS  KH ++   EY+S
Sbjct: 70  YNPQYHGFIHHYQHYLNSPQHHHQPQPQPQPQTKPIITYNSL-SSSFHKHNMSPIHEYNS 129

Query: 121 SHHDASSSGLAADYGYYYETPPFSTIDEDVGAMFSDENPHSCSIM 155
            ++  S    A DYGY+ E PPFSTIDE+ GAMFSDENPHSC+IM
Sbjct: 130 YNYSGSD---ADDYGYHQE-PPFSTIDEEAGAMFSDENPHSCAIM 169

[Close]

BLAST of MS013565.1 vs. ExPASy TrEMBL
Match: A0A6J1KMX2 (heavy metal-associated isoprenylated plant protein 28-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495625 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.5e-56
Identity = 117/165 (70.91%), Postives = 134/165 (81.21%), Query Frame = 0


Query: 1   MDCRGCEKQIRKALENLEGVDDVIIDLSMQKVTVMGWAEQKKVLKAVRRNGRTAELWPYP 60
           MDC GCEKQ+RKALE+L GVDDV+IDLSMQKVTVMGWA+QKK+LKA RRNGRTAELWPYP
Sbjct: 10  MDCTGCEKQVRKALESLPGVDDVVIDLSMQKVTVMGWAKQKKILKAARRNGRTAELWPYP 69

Query: 61  YNPQYHGFIHHYQ-YLNSPQH--------QPQTKPVVTYNSLPSSSSRKHKLT--QEYDS 120
           YNPQYHGFI+HYQ YLNSPQH        QPQTKP++TYNSL SSS  KH ++   EY+S
Sbjct: 70  YNPQYHGFIYHYQHYLNSPQHHHQPQPQPQPQTKPIITYNSLSSSSFHKHNMSPIHEYNS 129

Query: 121 SHHDASSSGLAADYGYYYETPPFSTIDEDVGAMFSDENPHSCSIM 155
            ++    SG  AD   Y++ PPFSTIDE+ GAMFSDENPHSC+IM
Sbjct: 130 YNY----SGSDADDYCYHQEPPFSTIDEEAGAMFSDENPHSCAIM 170

[Close]

BLAST of MS013565.1 vs. ExPASy TrEMBL
Match: A0A6J1KLD3 (heavy metal-associated isoprenylated plant protein 28-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111495625 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.5e-56
Identity = 117/165 (70.91%), Postives = 134/165 (81.21%), Query Frame = 0


Query: 1   MDCRGCEKQIRKALENLEGVDDVIIDLSMQKVTVMGWAEQKKVLKAVRRNGRTAELWPYP 60
           MDC GCEKQ+RKALE+L GVDDV+IDLSMQKVTVMGWA+QKK+LKA RRNGRTAELWPYP
Sbjct: 5   MDCTGCEKQVRKALESLPGVDDVVIDLSMQKVTVMGWAKQKKILKAARRNGRTAELWPYP 64

Query: 61  YNPQYHGFIHHYQ-YLNSPQH--------QPQTKPVVTYNSLPSSSSRKHKLT--QEYDS 120
           YNPQYHGFI+HYQ YLNSPQH        QPQTKP++TYNSL SSS  KH ++   EY+S
Sbjct: 65  YNPQYHGFIYHYQHYLNSPQHHHQPQPQPQPQTKPIITYNSLSSSSFHKHNMSPIHEYNS 124

Query: 121 SHHDASSSGLAADYGYYYETPPFSTIDEDVGAMFSDENPHSCSIM 155
            ++    SG  AD   Y++ PPFSTIDE+ GAMFSDENPHSC+IM
Sbjct: 125 YNY----SGSDADDYCYHQEPPFSTIDEEAGAMFSDENPHSCAIM 165

[Close]

BLAST of MS013565.1 vs. TAIR 10
Match: AT1G06330.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 105.9 bits (263), Expect = 2.9e-23
Identity = 67/162 (41.36%), Postives = 88/162 (54.32%), Query Frame = 0


Query: 1   MDCRGCEKQIRKALENLEGVDDVIIDLSMQKVTVMGWAEQKKVLKAVRRNGRTAELWPYP 60
           MDC GCE +++ AL+ + GVD V ID+  QKVTV G+A+QKKVLK VR+ GR AELW  P
Sbjct: 19  MDCVGCESRVKNALQKMRGVDAVEIDMVQQKVTVTGYADQKKVLKKVRKTGRRAELWQLP 78

Query: 61  YNPQY-------HGFIHHYQYLNSPQHQPQTKPVVTYNSLPSSSSRKHKLTQEYDSSHHD 120
           YNP +        G+ ++ Q  N P +     P  +YN        KH     YDS+   
Sbjct: 79  YNPDHMGGSSSNGGYFYNPQGCNGPINHAAPVPTSSYNYY------KH----GYDSN--- 138

Query: 121 ASSSGLAADYGYYYETPPFSTI-DEDVGAMFSDENPHSCSIM 155
                   DY  Y   P  ++I     G+ FSDENP++CSIM
Sbjct: 139 --------DYSSYRHHPVHASIFSHQTGSKFSDENPNACSIM 159

[Close]

BLAST of MS013565.1 vs. TAIR 10
Match: AT3G56891.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 99.8 bits (247), Expect = 2.1e-21
Identity = 58/156 (37.18%), Postives = 90/156 (57.69%), Query Frame = 0


Query: 1   MDCRGCEKQIRKALENLEGVDDVIIDLSMQKVTVMGWAEQKKVLKAVRRNGRTAELWPYP 60
           MDC+GCEK++R+A+  L+GVD V ID+  QKVTV G+ ++++VLK V+R GRTAE WP+P
Sbjct: 24  MDCKGCEKKVRRAISKLDGVDTVEIDVDRQKVTVTGYVDREEVLKMVKRTGRTAEYWPFP 83

Query: 61  YNPQYHGFIHHYQYLNSPQHQPQTKPVVTYNSLPSSSSRKHKLTQEYDSSHHDASSSGLA 120
           YN  Y  +     Y    QH  Q+   + Y ++  S         ++ ++++   +    
Sbjct: 84  YNGYYGDY-----YTYPSQHLEQSDQKI-YQTISYSGKYDFYDVDDFQNTNNSTIN---- 143

Query: 121 ADYGYYYETPP--FSTIDEDVGAMFSDENPHSCSIM 155
              GYY  +       IDE+   +FSD+N H+C+IM
Sbjct: 144 ---GYYPSSSQKVQPNIDENALHLFSDDNAHACTIM 166

[Close]

BLAST of MS013565.1 vs. TAIR 10
Match: AT1G29100.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 97.8 bits (242), Expect = 7.9e-21
Identity = 63/155 (40.65%), Postives = 84/155 (54.19%), Query Frame = 0


Query: 1   MDCRGCEKQIRKALENLEGVDDVIIDLSMQKVTVMGWAEQKKVLKAVRR-NGRTAELWPY 60
           MDC GCE ++RKALE + GV DV ID+  Q+VTV G AEQKKVLK  R    R   LW Y
Sbjct: 5   MDCPGCENKVRKALEKMNGVHDVQIDIKQQRVTVTGSAEQKKVLKVARNVTKRDICLWSY 64

Query: 61  PYNPQYHGFIHHYQYLNSPQHQPQTKPVVTYNSLPSSSSRKHKLTQEYDSSHHDASSSGL 120
           PY+P+ +G+   Y      + + + +  ++ N    SS   HK        +H       
Sbjct: 65  PYHPESNGYNDRYF-----KKKFRKRINMSVNGEKVSSYNYHK------HGYH------- 124

Query: 121 AADYGYYYETPPFSTIDEDVGAMFSDENPHSCSIM 155
             ++GYY E P    I+    +MFS+ENPH CSIM
Sbjct: 125 GHEHGYYQERPYSGLINPSASSMFSEENPHFCSIM 141

[Close]

BLAST of MS013565.1 vs. TAIR 10
Match: AT3G48970.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 82.8 bits (203), Expect = 2.6e-16
Identity = 57/159 (35.85%), Postives = 81/159 (50.94%), Query Frame = 0


Query: 1   MDCRGCEKQIRKALENLEGVDDVIIDLSMQKVTVMGW-AEQKKVLKAVRRNGRTAELWPY 60
           +DC GC  ++RK L  L+GV++V +++  QKVT  G+  E+KKVLKAVRR G+ AELWPY
Sbjct: 12  LDCEGCASKLRKTLLKLKGVEEVEVEMETQKVTARGYRLEEKKVLKAVRRAGKAAELWPY 71

Query: 61  PYNPQYHGFIHHYQYLNSPQHQPQTKPVVTYNSLPSSSSRKHKLTQEYDSSHHDASSSGL 120
                +  F   Y+Y                   PS       +T  Y S  H    +G 
Sbjct: 72  RLGNSH--FASFYKY-------------------PS------YVTNHYYSDAHRTDPTG- 131

Query: 121 AADYGYYYETPPFSTI----DEDVGAMFSDENPHSCSIM 155
                 ++ TP   ++    DE   +MFSD+NPH+C+IM
Sbjct: 132 --GVHTFFHTPADYSVAVAGDEIAASMFSDDNPHACTIM 140

[Close]

BLAST of MS013565.1 vs. TAIR 10
Match: AT2G18196.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 82.0 bits (201), Expect = 4.5e-16
Identity = 51/154 (33.12%), Postives = 77/154 (50.00%), Query Frame = 0


Query: 1   MDCRGCEKQIRKALENLEGVDDVIIDLSMQKVTVMGWAEQKKVLKAVRRNGRTAELWPYP 60
           M C GCE+ ++ A+  L GVD V ++L M++VTV+G+ E+KKVLKAVRR G+ AE WPYP
Sbjct: 54  MCCSGCERVVKHAIYKLRGVDSVEVNLEMERVTVVGYVERKKVLKAVRRAGKRAEFWPYP 113

Query: 61  YNPQYHGFIHHYQYLNSPQHQPQTKPVVTYNSLPSSSSRKHKLTQEYDSSHHDASSSGLA 120
             P+Y     HY                             +  + Y+   H      L+
Sbjct: 114 DMPRYFTSSDHY-----------------------FKDTTREFRESYNYYRH---GYNLS 173

Query: 121 ADYGYYYETPPFSTIDEDVGAMFSDENPHSCSIM 155
             +G  + T   +  D+ +   F+D+N H+CS+M
Sbjct: 174 DRHGNIHVT---NRGDDKMSNFFNDDNVHACSLM 178

The following BLAST results are available for this feature:

BLAST of MS013565.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140251.1	1.4e-83	100.00	heavy metal-associated isoprenylated plant protein 28-like [Momordica charantia]	[more]
KAG6583964.1	1.7e-57	72.73	Heavy metal-associated isoprenylated plant protein 28, partial [Cucurbita argyro...	[more]
XP_023519213.1	2.2e-57	72.73	heavy metal-associated isoprenylated plant protein 28-like isoform X1 [Cucurbita...	[more]
XP_023519214.1	2.2e-57	72.73	heavy metal-associated isoprenylated plant protein 29-like isoform X2 [Cucurbita...	[more]
XP_038895306.1	4.9e-57	72.62	heavy metal-associated isoprenylated plant protein 28-like isoform X1 [Benincasa...	[more]

BLAST of MS013565.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IC29	4.1e-22	41.36	Heavy metal-associated isoprenylated plant protein 28 OS=Arabidopsis thaliana OX...	[more]
B3H6D0	2.9e-20	37.18	Heavy metal-associated isoprenylated plant protein 45 OS=Arabidopsis thaliana OX...	[more]
Q9LP41	1.1e-19	40.65	Heavy metal-associated isoprenylated plant protein 29 OS=Arabidopsis thaliana OX...	[more]
Q84K70	3.7e-15	35.85	Heavy metal-associated isoprenylated plant protein 31 OS=Arabidopsis thaliana OX...	[more]
F4IQG4	6.3e-15	33.12	Heavy metal-associated isoprenylated plant protein 30 OS=Arabidopsis thaliana OX...	[more]

BLAST of MS013565.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CFI8	6.7e-84	100.00	heavy metal-associated isoprenylated plant protein 28-like OS=Momordica charanti...	[more]
A0A6J1EGT2	1.2e-56	72.73	heavy metal-associated isoprenylated plant protein 28-like isoform X1 OS=Cucurbi...	[more]
A0A6J1EGI2	1.2e-56	72.73	heavy metal-associated isoprenylated plant protein 28-like isoform X2 OS=Cucurbi...	[more]
A0A6J1KMX2	1.5e-56	70.91	heavy metal-associated isoprenylated plant protein 28-like isoform X1 OS=Cucurbi...	[more]
A0A6J1KLD3	1.5e-56	70.91	heavy metal-associated isoprenylated plant protein 28-like isoform X2 OS=Cucurbi...	[more]

BLAST of MS013565.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G06330.1	2.9e-23	41.36	Heavy metal transport/detoxification superfamily protein	[more]
AT3G56891.1	2.1e-21	37.18	Heavy metal transport/detoxification superfamily protein	[more]
AT1G29100.1	7.9e-21	40.65	Heavy metal transport/detoxification superfamily protein	[more]
AT3G48970.1	2.6e-16	35.85	Heavy metal transport/detoxification superfamily protein	[more]
AT2G18196.1	4.5e-16	33.12	Heavy metal transport/detoxification superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.70.100		coord: 1..55 e-value: 1.4E-13 score: 52.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..100
None	No IPR available	PANTHER	PTHR22814:SF312	HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 20-LIKE	coord: 1..154
None	No IPR available	PANTHER	PTHR22814	COPPER TRANSPORT PROTEIN ATOX1-RELATED	coord: 1..154
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 1..49 e-value: 1.1E-11 score: 45.0
IPR006121	Heavy metal-associated domain, HMA	PROSITE	PS50846	HMA_2	coord: 1..56 score: 13.139331
IPR006121	Heavy metal-associated domain, HMA	CDD	cd00371	HMA	coord: 1..55 e-value: 2.49333E-12 score: 56.4601
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 1..58

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS013565	MS013565	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS013565.1-cds	MS013565.1-cds-scaffold402:2481830..2482236	CDS
MS013565.1-cds	MS013565.1-cds-scaffold402:2482383..2482437	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS013565.1	MS013565.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding