MS013543.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS013543.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	WD repeat-containing protein
Location	scaffold402: 2321664 .. 2326438 (+)
Sequence length	1119
RNA-Seq Expression	MS013543.1
Synteny	MS013543.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGAGGCACCGCCGAGACGACTGAGGGGTCACAAAGCCACTGCAACGTGCTGCATCGCCTCGCATGACCGTCCTGGCCTTGTCGCTACTTCAGGCGAGGTTATATCTCCAACTTCCATTTTCTCCACCTCTAAAGTTATTTTGCTTGCTGAGAAAGTGCAACGGTTAAGTAGTAGACTGTACTTTTGGCCTTTACGTCCTCTTTCCTTGAATTCAGTGAACAATTAACTTCCAATGACTCATTGCTAATGTTCAGCTCTACCAGTTTTAACAATTTTCTTCGAGTAAGCTATTAAACGGTATTGAATTTTAGTAGGTTGCACAATCTTCCTTGAGCCTGTAATGACATCTCATTTGCGCCTCTGAGTGTACAGTTTCCATGCTCGATTTGAGCTTCAAATTTACCGTGAAAGTATATTAAAACTGAGAATTGTCGTTCTATATCTGATGTTAGAAACAATTGCCAACATAGATGTTTTAGAAGGATTTTGCATTCATATGACATCGGGTATGTCAGAAATAACTGGACTGGACTACATTAGTTAATTGTATTTAGCTTTTCTTTATTGGACGTTACCACTTCTTAATTAACTTCTTCCCTCTACGTTTTTCTGGAGGATGTAGGATGGTTGTGTTTGCTGGTTTGACATGAGATGCAAAGATGTCGTATCCATTATGGAAGTTGGAACAGAACCTATTTCATCCATATGTTTCAAGCCAGGTCCATTTCTCTCTTAGTCACTCTTTTATTTAACTCAGTGATGAACGAAACATTAATGATACACCTTAATATTTGTAGGATTCCATCTCAAAACTAATTAACAATTAGCAATGAGAGGACTGAGGAGTAGTCCATGTATTTATAGGTCTCTTGATCTTTTCGATGTGGCATCCTTAACGAGCCGCTAGCTAAAATAATTATATTCTCAAGATAGAAACTAAAATCTCAAGTGTACACTGTACATTCTTTTTTGTTGTTACAATTTCTGCTGATGCATTCTGCATTTCTTCCTTTTTGTTTAGTTTTGTTTTTTTGTGGCTTATTCAGGGAATGAAGATGTTATTTACATCTCCTCCGCGAAGGAAATTAAGTCATTTGATGTCCATCAGGTGATGAAGTTTCATATCGTTAAAAACTATATACTTTTATTTTATAGGAAAGAACGTACTGAACTAATGCAACTCGTGGTCAACTTTTTCCGAATATCACAATATTTGATGTCTATTTAGTCATGTCTTGTGCCTTTCCTATAAGAAGTGTATTAATATTAATGAGATTGAAGATGTCTTTTGAACTTTCATTTGTTGATGCTTGCTATGCCATGACTTTTATTCTTTTTACTTTTGGAGGCCACATCATCGAAACCATTGGGGAGTTATAGTTACAACAAAGAGGAGATCAATCAGGTAGAGCTAATCAGTATATGGTTTATACATTTATCTTGCTCTAGTTGGATCAGTTCTAATCACTTTGAAGATGTATTTTGAACTTTAATTTAGTAATGATGCTATTTTCTTTGTTTTAAGGCGTGGAGACATCCTATATAATCTAATAGTTTTTTTCTTTTTCTTTTTTAATAAAAAATCAATTATTATTGGTCGGAAGCCATTAGTCAAAACTTCTCCTTCCCATGCAGGTTTCTTGCAGCCCAAAATCTTCTTTTCTCGCTGCTGCCGATGATGGTGGTGATGTTAAGGTCAGCATCTTTAGCTTACTGAATTTTTTTTTTTCTTGGGATTCAAACTCAAATGAGCATGCACGATTGTTCTGTTTTCTGATTTTAGTTCAGTTTGATTAGATTAATAGTTGTATGATTTCTGGTAATTAGATTATGATCTTTTTTTTATTTGAGTATAATTTCTAGTGAGGACCTAAAAATGCTGGCATCAAGTGTCTACAGCATCCTTTTACCTTAGTGTTGCCTCCATCTGTTTGATTGCCAGTGAGATCTATAGTATGTTAAGAATTGTAATGCCCTATCTCAGTCTTTTATGCAAGCATGCACACATCCCACCCCTTTTTAGTAATAAAAATGCAGAAGCAATGGTTTATAATGTTGCTATGCCCAAATTGACAGTTTAAATGCTGATTATATTCTTTATGGCAGATCATTGACATTCACCAGCAATGCTTATATAAAACATTAAGATCTGGCCATTCGAGTGTATCCTTTCTTGAAACTTGAAGCACTTTTTAATACATCAGGTTGTGGCCCTCTGTATTCCATTTTTTCCCATGTACACTACAGTTCTTTAATCAGGTTACATGGATCCCATCTTTGCATCCTGAACCATATATTTAGATCTGTAGCAGTGTTCAGTTCCTTCCTTGGAGACCATGGGAAGGTATTTACTTGGAACATGTTAACTTTTTTCTCCACCTTTTTCTTCGGTGATTGTTCACTTGAGACAATCGGTGGTCCAGTCTGCATTATAAGCTCTTGAATCTGATAGCTTACATTGCAATATATAGTTTCTGATTTCTACAGTGAACAGGATCATTTATTTTATTGATTAGTGTATGCCAGTGAACTGTTTAGAAGTAGCTAAGCATATCAAATTATGAGTTATTCCTGACCTTAGTGTTTATTCTGGATTCTGAGAAGTTCAAAGAGAGCTCATTTATCATGAGGGCAGCTTCATTGCACTTATAAAAAAAGGAAAAAAAGGACATGAAAAGATCCAAACTTTCAAAGGTGTACTCTTATAATACTTAAGCTTGAGTCTCGATCTTGATGGAGATATACTCTGCTTGTTGATATGTTTCATTGATCATTGTGAGACACAGCTTCATAAAATGGTCAATCTGGATTTTGGAGTGATTCTTTGAGGTCAAGAGAAGCTTCTTTATTCTTCCACATGAAGGATGTATTTCAACTTCCATGAACACATGGATGGAAAGATGGAAACCATATTTTTGTCTTGTGTTGCAGCTTGTGCATCATATTTGAAGACGGATTTAGGATCCTGCATACTGATATTTCAGAGTTTTCTGGGAATGCGATAGAGAAATGCTTAACAGAGAGAACCTAGTGTACAAATTTATGGTACCGTAGGCCCGAAAGTTAGGTTTATTGTGGGCGTTCCCCATGCCAATGTATTTACGACCCCTGGAATCCTGGATAACCTGAGACATTATTGAAGTGGGTACTCATTGGACACAATTAGAGTTCAAATTCTATAGTTTGAGGATTGATAGATGTTATTCTTTTGCTGACTATCCTAATTCCTACCAGACTTAGAATTAAACGATAAGTTATAACTGTTAGTAAGTTGTTGCAAGTTCGGATGTACTTTAAAGTGTTTAGCCCACTTTGTTCAGAATTAGAGTATAAAAAACATTCAGTTCTTAGATTTTGTTTTTCTTTTGAATTGAACATTTCCATGGTTTGGTAGTCACATACGTCATCGATTTCTTTGCTAGTTGCTATTTTTGATGCTACACTACACACTATCACAGTCATCGTATTCTTTTTTCTAAGTTGTCCCATATTGAGACAATGGGAAGCCTCATCTTTACTATCTGACTGCTATTTCACAATTCTGTTACTTCACAGTTATTACGGGAGGTCTTGATTCAAAGCTCATTATTTGGGACTTCTCCAGAGGGCGCCCCATCAAAGTACTTGATTTTGGTTGGTACACATGCAGCCCATCTGTTCATGTGTTATTTCATGCTTTCCATTTTGTTTGCCCTAGCTCACCCAATATATATTCTTGAAAACTTAATTTCCATTTGCCTGTATCGTGAATCATGCAACGATGTCTACAAGACGTGGTAATAATAGCACACAATTTTGAAAAGAAAAAAAAATTACTATTACATGCCTTAGTAACTGCATCATATTCCATTTTCCAATGTTCATAAGTGGTGGCAATATAAATATAATTTGATTTGTTACAGATTATGTGTTTCAATGTCATTGACATGGTCGTGCATGGATAATTTTAGAAAAGAAAGAATGGTTACGATTATGCCAGTATCTGTTTAATGTAAGTAACACACGTATAAAAACACTTAACTGTTTTGTCATTTTCATCCTTCAACAGGTAGCCCGGACAACAACCCTTCCAGTAACTCTGGACAATGTTTTAATCCAGCATTTATTCATGCAATAGCGGTTCCTGAAGTTAATATGCTGGACAAATTGGGTCAGATATGTGTCGTGGCAAGGGGCGACGGTGTCGTGGACATGATTGATATTGAATCTGAGAAATCAAAGGTTTCTACAAAGGGTAAAAGATTACAAACAAGACCCAAGTCTAAGGGAGTTACAGCAGCTTGTGATACGGATAACCAAGAAGAAACTGGAAGAAAGAATTTACATTTGGATTACACTGTTGGTGGACATTCTGCTGCTGTGTCCTGTGTGTAAGTAATATCTTTCTCTTCTTATGCAAGGTGACGAATCTCCCTTACCAAATGGAAAATTTCAGGACATTTTCTCAATTTGGGGAGAAAGGGAAGTTCATAGTATCTGGTGGGAATGATAAATGCATAAAGCTTTGGAATTGTTCTGGAGTTCCTGATGCTGGGGATGCAGGCAGCAACAACAGTCTTCTCCATTTGAACATCAATCTGAGCAAAAAGGTTGGGTTCTATCGACATTTTCACATTCACGATCCATACTGTTACTCGTGTTTTCATCAATTATTTCCTAATTTGGTGATTCAATTTTCTGCAGGTGAATTGGCTATGTACCACTCCATCTGAAACAGAAAACCTAATCGTTTGTGATACCAGTAAAGTAGTGAAGGTATATACTGTTGCC

mRNA sequence

ATGTCGGAGGCACCGCCGAGACGACTGAGGGGTCACAAAGCCACTGCAACGTGCTGCATCGCCTCGCATGACCGTCCTGGCCTTGTCGCTACTTCAGGCGAGGATGGTTGTGTTTGCTGGTTTGACATGAGATGCAAAGATGTCGTATCCATTATGGAAGTTGGAACAGAACCTATTTCATCCATATGTTTCAAGCCAGGGAATGAAGATGTTATTTACATCTCCTCCGCGAAGGAAATTAAGTCATTTGATGTCCATCAGGCCACATCATCGAAACCATTGGGGAGTTATAGTTACAACAAAGAGGAGATCAATCAGGTTTCTTGCAGCCCAAAATCTTCTTTTCTCGCTGCTGCCGATGATGGTGGTGATGTTAAGATCATTGACATTCACCAGCAATGCTTATATAAAACATTAAGATCTGGCCATTCGAGTATCTGTAGCAGTGTTCAGTTCCTTCCTTGGAGACCATGGGAAGTTATTACGGGAGGTCTTGATTCAAAGCTCATTATTTGGGACTTCTCCAGAGGGCGCCCCATCAAAGTACTTGATTTTGGTTGCCCGGACAACAACCCTTCCAGTAACTCTGGACAATGTTTTAATCCAGCATTTATTCATGCAATAGCGGTTCCTGAAGTTAATATGCTGGACAAATTGGGTCAGATATGTGTCGTGGCAAGGGGCGACGGTGTCGTGGACATGATTGATATTGAATCTGAGAAATCAAAGGTTTCTACAAAGGGTAAAAGATTACAAACAAGACCCAAGTCTAAGGGAGTTACAGCAGCTTGTGATACGGATAACCAAGAAGAAACTGGAAGAAAGAATTTACATTTGGATTACACTGTTGGTGGACATTCTGCTGCTGTGTCCTGTGTGACATTTTCTCAATTTGGGGAGAAAGGGAAGTTCATAGTATCTGGTGGGAATGATAAATGCATAAAGCTTTGGAATTGTTCTGGAGTTCCTGATGCTGGGGATGCAGGCAGCAACAACAGTCTTCTCCATTTGAACATCAATCTGAGCAAAAAGGTGAATTGGCTATGTACCACTCCATCTGAAACAGAAAACCTAATCGTTTGTGATACCAGTAAAGTAGTGAAGGTATATACTGTTGCC

Coding sequence (CDS)

ATGTCGGAGGCACCGCCGAGACGACTGAGGGGTCACAAAGCCACTGCAACGTGCTGCATCGCCTCGCATGACCGTCCTGGCCTTGTCGCTACTTCAGGCGAGGATGGTTGTGTTTGCTGGTTTGACATGAGATGCAAAGATGTCGTATCCATTATGGAAGTTGGAACAGAACCTATTTCATCCATATGTTTCAAGCCAGGGAATGAAGATGTTATTTACATCTCCTCCGCGAAGGAAATTAAGTCATTTGATGTCCATCAGGCCACATCATCGAAACCATTGGGGAGTTATAGTTACAACAAAGAGGAGATCAATCAGGTTTCTTGCAGCCCAAAATCTTCTTTTCTCGCTGCTGCCGATGATGGTGGTGATGTTAAGATCATTGACATTCACCAGCAATGCTTATATAAAACATTAAGATCTGGCCATTCGAGTATCTGTAGCAGTGTTCAGTTCCTTCCTTGGAGACCATGGGAAGTTATTACGGGAGGTCTTGATTCAAAGCTCATTATTTGGGACTTCTCCAGAGGGCGCCCCATCAAAGTACTTGATTTTGGTTGCCCGGACAACAACCCTTCCAGTAACTCTGGACAATGTTTTAATCCAGCATTTATTCATGCAATAGCGGTTCCTGAAGTTAATATGCTGGACAAATTGGGTCAGATATGTGTCGTGGCAAGGGGCGACGGTGTCGTGGACATGATTGATATTGAATCTGAGAAATCAAAGGTTTCTACAAAGGGTAAAAGATTACAAACAAGACCCAAGTCTAAGGGAGTTACAGCAGCTTGTGATACGGATAACCAAGAAGAAACTGGAAGAAAGAATTTACATTTGGATTACACTGTTGGTGGACATTCTGCTGCTGTGTCCTGTGTGACATTTTCTCAATTTGGGGAGAAAGGGAAGTTCATAGTATCTGGTGGGAATGATAAATGCATAAAGCTTTGGAATTGTTCTGGAGTTCCTGATGCTGGGGATGCAGGCAGCAACAACAGTCTTCTCCATTTGAACATCAATCTGAGCAAAAAGGTGAATTGGCTATGTACCACTCCATCTGAAACAGAAAACCTAATCGTTTGTGATACCAGTAAAGTAGTGAAGGTATATACTGTTGCC

Protein sequence

MSEAPPRRLRGHKATATCCIASHDRPGLVATSGEDGCVCWFDMRCKDVVSIMEVGTEPISSICFKPGNEDVIYISSAKEIKSFDVHQATSSKPLGSYSYNKEEINQVSCSPKSSFLAAADDGGDVKIIDIHQQCLYKTLRSGHSSICSSVQFLPWRPWEVITGGLDSKLIIWDFSRGRPIKVLDFGCPDNNPSSNSGQCFNPAFIHAIAVPEVNMLDKLGQICVVARGDGVVDMIDIESEKSKVSTKGKRLQTRPKSKGVTAACDTDNQEETGRKNLHLDYTVGGHSAAVSCVTFSQFGEKGKFIVSGGNDKCIKLWNCSGVPDAGDAGSNNSLLHLNINLSKKVNWLCTTPSETENLIVCDTSKVVKVYTVA

Homology

[Close]

BLAST of MS013543.1 vs. NCBI nr
Match: XP_022140168.1 (cellulose synthase A catalytic subunit 8 [UDP-forming] [Momordica charantia])

HSP 1 Score: 766.5 bits (1978), Expect = 1.0e-217
Identity = 370/373 (99.20%), Postives = 370/373 (99.20%), Query Frame = 0


Query: 1   MSEAPPRRLRGHKATATCCIASHDRPGLVATSGEDGCVCWFDMRCKDVVSIMEVGTEPIS 60
           MSEAPPRRLRGHKATATCCIASHDRPGLVATSGEDGCVCWFDMRCKDVVSIMEVGTEPIS
Sbjct: 1   MSEAPPRRLRGHKATATCCIASHDRPGLVATSGEDGCVCWFDMRCKDVVSIMEVGTEPIS 60

Query: 61  SICFKPGNEDVIYISSAKEIKSFDVHQATSSKPLGSYSYNKEEINQVSCSPKSSFLAAAD 120
           SICFKPGNEDVIYISS KEIKSFDVHQATSSKPLGSYSYNKEEINQVSCSPKSSFLAAAD
Sbjct: 61  SICFKPGNEDVIYISSVKEIKSFDVHQATSSKPLGSYSYNKEEINQVSCSPKSSFLAAAD 120

Query: 121 DGGDVKIIDIHQQCLYKTLRSGHSSICSSVQFLPWRPWEVITGGLDSKLIIWDFSRGRPI 180
           DGGDVKIIDIHQQCLYKTLRSGHSSICSSVQFLPWRPWEVITGGLDSKLIIWDFSRGRPI
Sbjct: 121 DGGDVKIIDIHQQCLYKTLRSGHSSICSSVQFLPWRPWEVITGGLDSKLIIWDFSRGRPI 180

Query: 181 KVLDFGCPDNNPSSNSGQCFNPAFIHAIAVPEVNMLDKLGQICVVARGDGVVDMIDIESE 240
           KVLDFG PDNNPSSNSGQCFNPAFIHAIAVPEVNMLDKLGQICVVARGDGVVDMIDIESE
Sbjct: 181 KVLDFGSPDNNPSSNSGQCFNPAFIHAIAVPEVNMLDKLGQICVVARGDGVVDMIDIESE 240

Query: 241 KSKVSTKGKRLQTRPKSKGVTAACDTDNQEETGRKNLHLDYTVGGHSAAVSCVTFSQFGE 300
           KSKVSTKGKRLQTRPKSKGVTAACDTDNQEETGRKNLHLDYTVGGHSAAVSCVTFSQFGE
Sbjct: 241 KSKVSTKGKRLQTRPKSKGVTAACDTDNQEETGRKNLHLDYTVGGHSAAVSCVTFSQFGE 300

Query: 301 KGKFIVSGGNDKCIKLWNCSGVPDAGDAGSNNSLLHLNINLSKKVNWLCTTPSETENLIV 360
           KGKFIVSGGNDKCIKLWNCSGVPDAGDAG NNSLLHLNINLSKKVNWLCTTPSETENLIV
Sbjct: 301 KGKFIVSGGNDKCIKLWNCSGVPDAGDAGRNNSLLHLNINLSKKVNWLCTTPSETENLIV 360

Query: 361 CDTSKVVKVYTVA 374
           CDTSKVVKVYTVA
Sbjct: 361 CDTSKVVKVYTVA 373

[Close]

BLAST of MS013543.1 vs. NCBI nr
Match: XP_023001639.1 (cellulose synthase A catalytic subunit 8 [UDP-forming]-like [Cucurbita maxima])

HSP 1 Score: 685.6 bits (1768), Expect = 2.3e-193
Identity = 332/376 (88.30%), Postives = 353/376 (93.88%), Query Frame = 0


Query: 1   MSEAPPRRLRGHKATATCCIASHDRPGLVATSGEDGCVCWFDMRCKDVVSIMEVGTEPIS 60
           M+EAPPRRLRGHK TATCCIAS+DRPGLVATSGEDGCVCWFDMRCKDVVSIMEVG EPI+
Sbjct: 1   MTEAPPRRLRGHKGTATCCIASNDRPGLVATSGEDGCVCWFDMRCKDVVSIMEVGKEPIT 60

Query: 61  SICFKPGNEDVIYISSAKEIKSFDVHQATSSKPLGSYSYNKEEINQVSCSPKSSFLAAAD 120
           SICFK GNEDVIYISS KEIKSFDVHQATSSKPL SYSYNKEEINQVSCSPKSSFLAAAD
Sbjct: 61  SICFKQGNEDVIYISSGKEIKSFDVHQATSSKPLESYSYNKEEINQVSCSPKSSFLAAAD 120

Query: 121 DGGDVKIIDIHQQCLYKTLRSGHSSICSSVQFLPWRPWEVITGGLDSKLIIWDFSRGRPI 180
           DGGDVKIIDIHQ CLYKTLRSGH+SICSSVQFLPWRPWEVITGGLDSKLI+WDFSRGRPI
Sbjct: 121 DGGDVKIIDIHQNCLYKTLRSGHTSICSSVQFLPWRPWEVITGGLDSKLIMWDFSRGRPI 180

Query: 181 KVLDFGCPDNNPSSNSGQCFNPAFIHAIAVPEVNMLDKLGQICVVARGDGVVDMIDIESE 240
           KVLDF  PDNNPSSN+GQCFNPAFIHAI VPEVNM+D+LGQICVVARGDGVV +IDIESE
Sbjct: 181 KVLDFDFPDNNPSSNTGQCFNPAFIHAIVVPEVNMVDRLGQICVVARGDGVVHVIDIESE 240

Query: 241 KSKVSTK-GKRLQTRPKSKGVTAACDTDNQEETGRKNLHLDYTVGGHSAAVSCVTFSQFG 300
           KSK+STK  KR QTR  SKGVTAACD DNQE++GRK L+LDYTVGGHSAAVSCV FS+FG
Sbjct: 241 KSKISTKTSKRTQTR--SKGVTAACDVDNQEQSGRKRLYLDYTVGGHSAAVSCVAFSRFG 300

Query: 301 EKGKFIVSGGNDKCIKLWNCSGVPDAGDAGS--NNSLLHLNINLSKKVNWLCTTPSETEN 360
           EKGKFIVSGGNDKC+KLWN SGVPDAG+AGS  NN +LHLNI+L+KKVNWLCTTPS+TEN
Sbjct: 301 EKGKFIVSGGNDKCVKLWNWSGVPDAGEAGSSNNNKILHLNIDLNKKVNWLCTTPSDTEN 360

Query: 361 LIVCDTSKVVKVYTVA 374
           L+VCDTSKVVKVY VA
Sbjct: 361 LVVCDTSKVVKVYNVA 374

[Close]

BLAST of MS013543.1 vs. NCBI nr
Match: XP_038895617.1 (WD repeat-containing protein 53 [Benincasa hispida])

HSP 1 Score: 684.1 bits (1764), Expect = 6.7e-193
Identity = 334/375 (89.07%), Postives = 352/375 (93.87%), Query Frame = 0


Query: 1   MSEAPPRRLRGHKATATCCIASHDRPGLVATSGEDGCVCWFDMRCKDVVSIMEVGTEPIS 60
           MSEAP RRLRGH+ATATCCIAS+DRPGLVATSGEDGCVCWFDMRCKDVVSIMEVG EPIS
Sbjct: 1   MSEAPLRRLRGHRATATCCIASNDRPGLVATSGEDGCVCWFDMRCKDVVSIMEVGKEPIS 60

Query: 61  SICFKPGNEDVIYISSAKEIKSFDVHQATSSKPLGSYSYNKEEINQVSCSPKSSFLAAAD 120
           SICFKPGNEDVIYISS KEIKSFDVHQA SSKPLGSYSYNKEEINQVSCSPK+SFLAAAD
Sbjct: 61  SICFKPGNEDVIYISSGKEIKSFDVHQAASSKPLGSYSYNKEEINQVSCSPKASFLAAAD 120

Query: 121 DGGDVKIIDIHQQCLYKTLRSGHSSICSSVQFLPWRPWEVITGGLDSKLIIWDFSRGRPI 180
           DGGDVKIIDIH  CLYKTLRSGH+SICSSVQFLPWRPWEVITGGLDSKLI+WDFSRGRPI
Sbjct: 121 DGGDVKIIDIHNNCLYKTLRSGHTSICSSVQFLPWRPWEVITGGLDSKLIMWDFSRGRPI 180

Query: 181 KVLDFGCPDNNPSSNSGQCFNPAFIHAIAVPEVNMLDKLGQICVVARGDGVVDMIDIESE 240
           KVLDF  PDNNPSSN+GQCFNPAFIHAIAVPEVNMLDKLGQICVVARGDG+V +IDIESE
Sbjct: 181 KVLDFDIPDNNPSSNTGQCFNPAFIHAIAVPEVNMLDKLGQICVVARGDGIVHVIDIESE 240

Query: 241 KSKVSTK-GKRLQTRPKSKGVTAACDTDNQEETGRKNLHLDYTVGGHSAAVSCVTFSQFG 300
           K+K S+K GKR+QTR  SKGV AACD DNQ++TGRK L+LDYTVGGHSAAVSCV FSQFG
Sbjct: 241 KAKNSSKSGKRIQTR--SKGVRAACDMDNQKQTGRKRLYLDYTVGGHSAAVSCVAFSQFG 300

Query: 301 EKGKFIVSGGNDKCIKLWNCSGVPDAGDAG-SNNSLLHLNINLSKKVNWLCTTPSETENL 360
           EKG+FIVSGGNDKCIKLWN S VPDAG+ G SNN +L+LNINLSKKVNWLCTTPSETENL
Sbjct: 301 EKGRFIVSGGNDKCIKLWNWSRVPDAGETGSSNNDILYLNINLSKKVNWLCTTPSETENL 360

Query: 361 IVCDTSKVVKVYTVA 374
           IVCDTSKVVKVY VA
Sbjct: 361 IVCDTSKVVKVYNVA 373

[Close]

BLAST of MS013543.1 vs. NCBI nr
Match: XP_022927120.1 (cellulose synthase A catalytic subunit 8 [UDP-forming]-like [Cucurbita moschata])

HSP 1 Score: 678.3 bits (1749), Expect = 3.7e-191
Identity = 328/371 (88.41%), Postives = 349/371 (94.07%), Query Frame = 0


Query: 1   MSEAPPRRLRGHKATATCCIASHDRPGLVATSGEDGCVCWFDMRCKDVVSIMEVGTEPIS 60
           M+EAPPRRLRGHK TATCCIAS+DRPGLVATSGEDGCVCWFDMRCKDVVSIMEVG EPI+
Sbjct: 1   MTEAPPRRLRGHKGTATCCIASNDRPGLVATSGEDGCVCWFDMRCKDVVSIMEVGKEPIT 60

Query: 61  SICFKPGNEDVIYISSAKEIKSFDVHQATSSKPLGSYSYNKEEINQVSCSPKSSFLAAAD 120
           SICFK GNEDVIYISS KEIKSFDVHQATSSKPL SYSYNKEEINQVSCSPKSSFLAAAD
Sbjct: 61  SICFKQGNEDVIYISSGKEIKSFDVHQATSSKPLESYSYNKEEINQVSCSPKSSFLAAAD 120

Query: 121 DGGDVKIIDIHQQCLYKTLRSGHSSICSSVQFLPWRPWEVITGGLDSKLIIWDFSRGRPI 180
           DGGDVKIIDIHQ CLYKTLRSGH+SICSSVQFLPWRPWEVITGGLDSKLI+WDFSRGRPI
Sbjct: 121 DGGDVKIIDIHQNCLYKTLRSGHTSICSSVQFLPWRPWEVITGGLDSKLIMWDFSRGRPI 180

Query: 181 KVLDFGCPDNNPSSNSGQCFNPAFIHAIAVPEVNMLDKLGQICVVARGDGVVDMIDIESE 240
           KVLDF  PDNNPSSN+GQCFNPAFIHAI VPEVNM+D+LGQICVVARGDGVV +IDIESE
Sbjct: 181 KVLDFDIPDNNPSSNTGQCFNPAFIHAIVVPEVNMVDRLGQICVVARGDGVVHVIDIESE 240

Query: 241 KSKVSTK-GKRLQTRPKSKGVTAACDTDNQEETGRKNLHLDYTVGGHSAAVSCVTFSQFG 300
           KSK+STK  KR QTR  SKGVTAACD DNQE++GRK L+LDYTVGGHSAAVSCV FS+FG
Sbjct: 241 KSKISTKTSKRTQTR--SKGVTAACDGDNQEQSGRKRLYLDYTVGGHSAAVSCVAFSRFG 300

Query: 301 EKGKFIVSGGNDKCIKLWNCSGVPDAGDAGS--NNSLLHLNINLSKKVNWLCTTPSETEN 360
           EKGKFIVSGGNDKC+KLWN SGVPDAG+AGS  NN +LHLNI+L+KKVNWLCTTPS+TEN
Sbjct: 301 EKGKFIVSGGNDKCVKLWNWSGVPDAGEAGSSNNNKILHLNIDLNKKVNWLCTTPSDTEN 360

Query: 361 LIVCDTSKVVK 369
           L+VCDTSKVVK
Sbjct: 361 LVVCDTSKVVK 369

[Close]

BLAST of MS013543.1 vs. NCBI nr
Match: XP_023520223.1 (cellulose synthase A catalytic subunit 8 [UDP-forming]-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 677.6 bits (1747), Expect = 6.3e-191
Identity = 330/376 (87.77%), Postives = 351/376 (93.35%), Query Frame = 0


Query: 1   MSEAPPRRLRGHKATATCCIASHDRPGLVATSGEDGCVCWFDMRCKDVVSIMEVGTEPIS 60
           M+EAPPRRLRGHK TATCCIAS+DRPGLVATSGEDGCVCWFDMRCKDVVSIMEVG EPI+
Sbjct: 1   MTEAPPRRLRGHKGTATCCIASNDRPGLVATSGEDGCVCWFDMRCKDVVSIMEVGKEPIT 60

Query: 61  SICFKPGNEDVIYISSAKEIKSFDVHQATSSKPLGSYSYNKEEINQVSCSPKSSFLAAAD 120
           SICFK GNEDVIYISS KEIKSFDVHQATSSKPL SYSYNKEEINQVSCSPKSSFLAAAD
Sbjct: 61  SICFKQGNEDVIYISSGKEIKSFDVHQATSSKPLESYSYNKEEINQVSCSPKSSFLAAAD 120

Query: 121 DGGDVKIIDIHQQCLYKTLRSGHSSICSSVQFLPWRPWEVITGGLDSKLIIWDFSRGRPI 180
           DGGDVKIIDIHQ CLYKTLRSGH+SICSSVQFLPWRPWEVITGGLDSKLI+WDFSRGRPI
Sbjct: 121 DGGDVKIIDIHQNCLYKTLRSGHTSICSSVQFLPWRPWEVITGGLDSKLIMWDFSRGRPI 180

Query: 181 KVLDFGCPDNNPSSNSGQCFNPAFIHAIAVPEVNMLDKLGQICVVARGDGVVDMIDIESE 240
           KVLDF  PDNNPSSN+GQCFNPAFIHAI VPEVNM+DKLGQICVVARGDGVV +IDIESE
Sbjct: 181 KVLDFDIPDNNPSSNTGQCFNPAFIHAIVVPEVNMVDKLGQICVVARGDGVVHVIDIESE 240

Query: 241 KSKVSTK-GKRLQTRPKSKGVTAACDTDNQEETGRKNLHLDYTVGGHSAAVSCVTFSQFG 300
           KSK+STK  KR QTR  SKGVTAACD DN  ++GRK L+LDYTVGGHSAAVSCV FS+FG
Sbjct: 241 KSKISTKSSKRTQTR--SKGVTAACDVDNL-QSGRKRLYLDYTVGGHSAAVSCVAFSRFG 300

Query: 301 EKGKFIVSGGNDKCIKLWNCSGVPDAGDAG--SNNSLLHLNINLSKKVNWLCTTPSETEN 360
           EKGKF+VSGGNDKC+KLWN SGVPDAG+AG  SNN +LHLNI+L+KKVNWLCTTPS+TEN
Sbjct: 301 EKGKFVVSGGNDKCVKLWNWSGVPDAGEAGSSSNNKILHLNIDLNKKVNWLCTTPSDTEN 360

Query: 361 LIVCDTSKVVKVYTVA 374
           L+VCDTSKVVKVY VA
Sbjct: 361 LVVCDTSKVVKVYNVA 373

[Close]

BLAST of MS013543.1 vs. ExPASy Swiss-Prot
Match: Q9DB94 (WD repeat-containing protein 53 OS=Mus musculus OX=10090 GN=Wdr53 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.9e-28
Identity = 104/395 (26.33%), Postives = 168/395 (42.53%), Query Frame = 0


Query: 11  GHKATATCCIASHDRPGLVATSGEDGCVCWFDMRCKDVVSIMEVGTEPISSICFKPGNED 70
           GH ++  C  A+ D  GLVA+ GE G +  +      +  +   G + ++S+ F      
Sbjct: 8   GHSSSILCLNANKD--GLVASGGEGGDLVAWGEDGTPLGHMQLEGADDVTSVLFSASCPT 67

Query: 71  VIYISSAKEIKSFDVHQATSSKPLGSYSYNKEEINQVSCSPKSSFLAAADDGGDVKIIDI 130
            +Y S  + I   DV     S  L  +  N+EEIN +S +   S LA+ADD G +KI+D+
Sbjct: 68  KLYASHGETISVLDVRSLKGS--LDHFHVNEEEINCLSLNETESLLASADDSGAIKILDL 127

Query: 131 HQQCLYKTLRSGHSSICSSVQFLPWRPWEVITGGLDSKLIIWDFSRGRPIKVLDF---GC 190
            ++ + ++L+  HS+ICSSV F P RP  +++ GLD ++++W   + RP+ + +      
Sbjct: 128 EKKKVTRSLKR-HSNICSSVAFRPQRPQSLVSCGLDMQVMLWSLQKARPVWITNLQEDET 187

Query: 191 PDNNPSSNSGQCFNPAFIHAIAVPEVNMLDKLGQICVVARGDGVVDMIDIESEKSKVSTK 250
            +       G+  NPA  H+++V         G I      DG V +  +   K      
Sbjct: 188 EETEGPQTPGRLLNPALAHSVSVA------SCGNIFSCGAEDGKVRIFRVMGVKC----- 247

Query: 251 GKRLQTRPKSKGVTAACDTDNQEETGRKNLHLDYTVGGHSAAVSCVTFSQFGEKGKFIVS 310
                                + E G K         GH+  VS V F     +   +++
Sbjct: 248 ---------------------ERELGFK---------GHTLGVSQVCFL---PESSLLLT 307

Query: 311 GGNDKCIKLWNCSG-------------------------------VPDAGDAGSNNSLLH 370
           GGND  I+LW+ SG                                P A D G    L  
Sbjct: 308 GGNDGRIRLWDVSGKMEKLQKSPARHIHRKKAKRAACPTQGGNSRAPGAEDEGHAKILPK 353

[Close]

BLAST of MS013543.1 vs. ExPASy Swiss-Prot
Match: Q32KQ2 (WD repeat-containing protein 53 OS=Bos taurus OX=9913 GN=WDR53 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 6.0e-27
Identity = 101/395 (25.57%), Postives = 168/395 (42.53%), Query Frame = 0


Query: 11  GHKATATCCIASHDRPGLVATSGEDGCVCWFDMRCKDVVSIMEVGTEPISSICFKPGNED 70
           GH +   C  AS +  GLVA+  E G +  +      +      G E ++++ F P    
Sbjct: 8   GHSSPILCLNASQE--GLVASGAEGGDLVVWGEDGTLLGHTCFQGAEDVTNVLFSPSCPT 67

Query: 71  VIYISSAKEIKSFDVHQATSSKPLGSYSYNKEEINQVSCSPKSSFLAAADDGGDVKIIDI 130
            +Y S  + I   DV   +  +PL  +  N+EEIN +S +   + LA+ADD G +KI+D+
Sbjct: 68  KLYASHGETISILDVR--SLKEPLDDFHVNEEEINCLSLNETENLLASADDSGTIKILDL 127

Query: 131 HQQCLYKTLRSGHSSICSSVQFLPWRPWEVITGGLDSKLIIWDFSRGRPIKVLDF---GC 190
             + + ++L+  HS+ICSSV F P RP  +++ GLD ++++W+  + RP+ + +      
Sbjct: 128 ENKKISRSLKR-HSNICSSVAFRPQRPQSLVSCGLDMQVMLWNLRKARPLWITNLQEDET 187

Query: 191 PDNNPSSNSGQCFNPAFIHAIAVPEVNMLDKLGQICVVARGDGVVDMIDIESEKSKVSTK 250
            +     + GQ  NPA  H+++V         G +      DG V +  +   K      
Sbjct: 188 EEMESPQSPGQLLNPALAHSVSVA------SCGNVFSCGAEDGKVRIFRVMGVKC----- 247

Query: 251 GKRLQTRPKSKGVTAACDTDNQEETGRKNLHLDYTVGGHSAAVSCVTFSQFGEKGKFIVS 310
                                ++E G K         GHS  VS V F +   +   +++
Sbjct: 248 ---------------------EQELGFK---------GHSLGVSQVCFLR---ESYLLLT 307

Query: 311 GGNDKCIKLWNCSGVPD-------------------------------AGDAGSNNSLLH 370
           GGND  IKLW+ S   +                                G+      L  
Sbjct: 308 GGNDGKIKLWDVSSEIEKKHKSPTKHTHRKKTKRAAYTKQGGGTHASVTGEDEHGKILPK 353

[Close]

BLAST of MS013543.1 vs. ExPASy Swiss-Prot
Match: Q7Z5U6 (WD repeat-containing protein 53 OS=Homo sapiens OX=9606 GN=WDR53 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.9e-25
Identity = 100/372 (26.88%), Postives = 163/372 (43.82%), Query Frame = 0


Query: 11  GHKATATCCIASHDRPGLVATSGEDGCVCWFDMRCKDVVSIMEVGTEPISSICFKPGNED 70
           GH +   C  AS  + GL+A+  E G +  +      +      G + ++S+ F P    
Sbjct: 8   GHSSPVLCLNAS--KEGLLASGAEGGDLTAWGEDGTPLGHTRFQGADDVTSVLFSPSCPT 67

Query: 71  VIYISSAKEIKSFDVHQATSSKPLGSYSYNKEEINQVSCSPKSSFLAAADDGGDVKIIDI 130
            +Y S  + I   DV     S  L  +  N+EEIN +S +   + LA+ADD G +KI+D+
Sbjct: 68  KLYASHGETISVLDVRSLKDS--LDHFHVNEEEINCLSLNQTENLLASADDSGAIKILDL 127

Query: 131 HQQCLYKTLRSGHSSICSSVQFLPWRPWEVITGGLDSKLIIWDFSRGRPIKVLDF---GC 190
             + + ++L+  HS+ICSSV F P RP  +++ GLD ++++W   + RP+ + +      
Sbjct: 128 ENKKVIRSLKR-HSNICSSVAFRPQRPQSLVSCGLDMQVMLWSLQKARPLWITNLQEDET 187

Query: 191 PDNNPSSNSGQCFNPAFIHAIAVPEVNMLDKLGQICVVARGDGVVDMIDIESEKSKVSTK 250
            +     + GQ  NPA  H+I+V         G I      DG V +  +   K +    
Sbjct: 188 EEMEGPQSPGQLLNPALAHSISVA------SCGNIFSCGAEDGKVRIFRVMGVKCE---- 247

Query: 251 GKRLQTRPKSKGVTAACDTDNQEETGRKNLHLDYTVGGHSAAVSCVTFSQFGEKGKFIVS 310
            + L  +  + GV+  C             +L  T G           S+  +K K    
Sbjct: 248 -QELGFKGHTSGVSQVCFLPES--------YLLLTGGNDGKITLWDANSEVEKKQKSPTK 307

Query: 311 GGNDKCIKLWNC--------SGVPDAGDAGSNNSLLHLNINLSKKVNWLCTTPSE-TENL 370
             + K  K   C        + V D  + G  N L  LNI   +KVNWL  T  +  +N+
Sbjct: 308 RTHRKKPKRGTCTKQGGNTNASVTDEEEHG--NILPKLNIEHGEKVNWLLGTKIKGHQNI 353

[Close]

BLAST of MS013543.1 vs. ExPASy Swiss-Prot
Match: Q54BI5 (WD repeat-containing protein 53 homolog OS=Dictyostelium discoideum OX=44689 GN=wdr53 PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.3e-21
Identity = 96/389 (24.68%), Postives = 164/389 (42.16%), Query Frame = 0


Query: 8   RLRGHKATATCCIASHDRPGLVATSGEDGCVCWFDMRC-KDVVSIME-VGTEPISSICFK 67
           +L GHK T   CI+SH++  ++A+  +D  V  +D+   K + SI+E     P++++CF 
Sbjct: 24  KLIGHKDT-VLCISSHNKKEIIASGSDDCTVRIWDLNTNKSIQSIVEGFQGNPVNNVCF- 83

Query: 68  PGNEDVIYISSAKEIKSFDVHQ--ATSSKPLGSYSYNKEEINQVSCSPKSSFLAAADDGG 127
              +  +Y S    I SFD+ Q      +    Y +N EEINQ+S   K  +LAA DD G
Sbjct: 84  -DQDFTLYCSYDNIIVSFDLRQPNVILKEFNTQYKFNTEEINQLSFDSKYQYLAACDDSG 143

Query: 128 DVKIIDIHQQCLYKTLRSGHSSICSSVQFLPWRPWEVITGGLDSKLIIWDFSRGRPIKVL 187
             KIID+ +  L ++L   H++I +   F P    E+IT  +D  +I WDF + + +   
Sbjct: 144 QTKIIDVTKNKLVESLNKKHTNIATGCVFRPNSKNELITSSMDFSIIHWDFLKAKVLHRD 203

Query: 188 DF---GCPDNNPSSNSGQ--------CFNPAFIHAIAVPEVNMLDKLGQICVVARGDGVV 247
            F     P N   S   Q          NP F+ ++            +   ++ GDG +
Sbjct: 204 TFKEGSLPQNISKSQQQQQETTEPNRMLNPPFVTSVD------CSNNSKYVAISMGDGTI 263

Query: 248 DMIDIESEKSKVSTKGKRLQTRPKSKGVTAACDTDNQEETGRKNLHLDYTVGGHSAAVSC 307
            + +I S K  +                                         H +++  
Sbjct: 264 VINEISSFKQYLKINSI------------------------------------HKSSIQQ 323

Query: 308 VTFSQFGEKG--KFIVSGGNDKCIKLWNCSGVPDAGDAGS-------NNSLLHLNINLSK 367
           V + ++ E    + I  G  DK I +W+ S   +   + S       NN  +   +  S+
Sbjct: 324 VHYPKYLENNYQRLISFGNYDKKIVIWDVSEDMNTKVSSSLLSNDEKNNERIKTWLEHSE 367

Query: 368 KVNWLCTTPSETENLIVCDTSKVVKVYTV 373
           K+N L T+  +   + V D S  +K+ ++
Sbjct: 384 KINCLTTSNLKNNAIFVADLSNDLKLLSI 367

[Close]

BLAST of MS013543.1 vs. ExPASy Swiss-Prot
Match: Q9M2Z2 (COMPASS-like H3K4 histone methylase component WDR5A OS=Arabidopsis thaliana OX=3702 GN=WDR5A PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.8e-10
Identity = 74/326 (22.70%), Postives = 133/326 (40.80%), Query Frame = 0


Query: 59  ISSICFKPGNEDVIYISSAKEIKSFDVHQATS--SKPLGSYSYNKEEINQVSCSPKSSFL 118
           +SS+ F      +   S+ K I+++ ++      ++P+  ++ ++  I+ V+ S  + F+
Sbjct: 27  VSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFI 86

Query: 119 AAADDGGDVKIIDIHQQCLYKTLRSGHSSICSSVQFLPWRPWEVITGGLDSKLIIWDFSR 178
            +A D   +K+ D+    L KTL  GH++    V F P +   +++G  D  + IWD + 
Sbjct: 87  VSASDDKTLKLWDVETGSLIKTL-IGHTNYAFCVNFNP-QSNMIVSGSFDETVRIWDVTT 146

Query: 179 GRPIKVLDFGCPDNNPSSNSGQCFNPAFIHAIAVPEVNMLDKLGQICVVARGDGVVDMID 238
           G+ +KVL                  PA    +   + N   + G + V +  DG+  + D
Sbjct: 147 GKCLKVL------------------PAHSDPVTAVDFN---RDGSLIVSSSYDGLCRIWD 206

Query: 239 ----------IESEKSKVSTKGKRLQTRPKSKGVTAACDTDNQEETGRKNLHLDYTVGGH 298
                     I+ E   VS     ++  P  K +      +        +     T  GH
Sbjct: 207 SGTGHCVKTLIDDENPPVSF----VRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGH 266

Query: 299 SAAVSCVTFSQFGEKGKFIVSGGNDKCIKLWNCSGVPDAGDAGSNNSLLHLNINLSKKVN 358
             A  C++ +     GK IVSG  D C+ +W         +  S   L  L  +    +N
Sbjct: 267 VNAQYCISSAFSVTNGKRIVSGSEDNCVHMW---------ELNSKKLLQKLEGHTETVMN 313

Query: 359 WLCTTPSETENLIVCDT-SKVVKVYT 372
             C     TENLI   +  K V+++T
Sbjct: 327 VAC---HPTENLIASGSLDKTVRIWT 313

[Close]

BLAST of MS013543.1 vs. ExPASy TrEMBL
Match: A0A6J1CHE3 (Cellulose synthase OS=Momordica charantia OX=3673 GN=LOC111010900 PE=3 SV=1)

HSP 1 Score: 766.5 bits (1978), Expect = 5.0e-218
Identity = 370/373 (99.20%), Postives = 370/373 (99.20%), Query Frame = 0


Query: 1   MSEAPPRRLRGHKATATCCIASHDRPGLVATSGEDGCVCWFDMRCKDVVSIMEVGTEPIS 60
           MSEAPPRRLRGHKATATCCIASHDRPGLVATSGEDGCVCWFDMRCKDVVSIMEVGTEPIS
Sbjct: 1   MSEAPPRRLRGHKATATCCIASHDRPGLVATSGEDGCVCWFDMRCKDVVSIMEVGTEPIS 60

Query: 61  SICFKPGNEDVIYISSAKEIKSFDVHQATSSKPLGSYSYNKEEINQVSCSPKSSFLAAAD 120
           SICFKPGNEDVIYISS KEIKSFDVHQATSSKPLGSYSYNKEEINQVSCSPKSSFLAAAD
Sbjct: 61  SICFKPGNEDVIYISSVKEIKSFDVHQATSSKPLGSYSYNKEEINQVSCSPKSSFLAAAD 120

Query: 121 DGGDVKIIDIHQQCLYKTLRSGHSSICSSVQFLPWRPWEVITGGLDSKLIIWDFSRGRPI 180
           DGGDVKIIDIHQQCLYKTLRSGHSSICSSVQFLPWRPWEVITGGLDSKLIIWDFSRGRPI
Sbjct: 121 DGGDVKIIDIHQQCLYKTLRSGHSSICSSVQFLPWRPWEVITGGLDSKLIIWDFSRGRPI 180

Query: 181 KVLDFGCPDNNPSSNSGQCFNPAFIHAIAVPEVNMLDKLGQICVVARGDGVVDMIDIESE 240
           KVLDFG PDNNPSSNSGQCFNPAFIHAIAVPEVNMLDKLGQICVVARGDGVVDMIDIESE
Sbjct: 181 KVLDFGSPDNNPSSNSGQCFNPAFIHAIAVPEVNMLDKLGQICVVARGDGVVDMIDIESE 240

Query: 241 KSKVSTKGKRLQTRPKSKGVTAACDTDNQEETGRKNLHLDYTVGGHSAAVSCVTFSQFGE 300
           KSKVSTKGKRLQTRPKSKGVTAACDTDNQEETGRKNLHLDYTVGGHSAAVSCVTFSQFGE
Sbjct: 241 KSKVSTKGKRLQTRPKSKGVTAACDTDNQEETGRKNLHLDYTVGGHSAAVSCVTFSQFGE 300

Query: 301 KGKFIVSGGNDKCIKLWNCSGVPDAGDAGSNNSLLHLNINLSKKVNWLCTTPSETENLIV 360
           KGKFIVSGGNDKCIKLWNCSGVPDAGDAG NNSLLHLNINLSKKVNWLCTTPSETENLIV
Sbjct: 301 KGKFIVSGGNDKCIKLWNCSGVPDAGDAGRNNSLLHLNINLSKKVNWLCTTPSETENLIV 360

Query: 361 CDTSKVVKVYTVA 374
           CDTSKVVKVYTVA
Sbjct: 361 CDTSKVVKVYTVA 373

[Close]

BLAST of MS013543.1 vs. ExPASy TrEMBL
Match: A0A6J1KNA5 (Cellulose synthase OS=Cucurbita maxima OX=3661 GN=LOC111495711 PE=3 SV=1)

HSP 1 Score: 685.6 bits (1768), Expect = 1.1e-193
Identity = 332/376 (88.30%), Postives = 353/376 (93.88%), Query Frame = 0


Query: 1   MSEAPPRRLRGHKATATCCIASHDRPGLVATSGEDGCVCWFDMRCKDVVSIMEVGTEPIS 60
           M+EAPPRRLRGHK TATCCIAS+DRPGLVATSGEDGCVCWFDMRCKDVVSIMEVG EPI+
Sbjct: 1   MTEAPPRRLRGHKGTATCCIASNDRPGLVATSGEDGCVCWFDMRCKDVVSIMEVGKEPIT 60

Query: 61  SICFKPGNEDVIYISSAKEIKSFDVHQATSSKPLGSYSYNKEEINQVSCSPKSSFLAAAD 120
           SICFK GNEDVIYISS KEIKSFDVHQATSSKPL SYSYNKEEINQVSCSPKSSFLAAAD
Sbjct: 61  SICFKQGNEDVIYISSGKEIKSFDVHQATSSKPLESYSYNKEEINQVSCSPKSSFLAAAD 120

Query: 121 DGGDVKIIDIHQQCLYKTLRSGHSSICSSVQFLPWRPWEVITGGLDSKLIIWDFSRGRPI 180
           DGGDVKIIDIHQ CLYKTLRSGH+SICSSVQFLPWRPWEVITGGLDSKLI+WDFSRGRPI
Sbjct: 121 DGGDVKIIDIHQNCLYKTLRSGHTSICSSVQFLPWRPWEVITGGLDSKLIMWDFSRGRPI 180

Query: 181 KVLDFGCPDNNPSSNSGQCFNPAFIHAIAVPEVNMLDKLGQICVVARGDGVVDMIDIESE 240
           KVLDF  PDNNPSSN+GQCFNPAFIHAI VPEVNM+D+LGQICVVARGDGVV +IDIESE
Sbjct: 181 KVLDFDFPDNNPSSNTGQCFNPAFIHAIVVPEVNMVDRLGQICVVARGDGVVHVIDIESE 240

Query: 241 KSKVSTK-GKRLQTRPKSKGVTAACDTDNQEETGRKNLHLDYTVGGHSAAVSCVTFSQFG 300
           KSK+STK  KR QTR  SKGVTAACD DNQE++GRK L+LDYTVGGHSAAVSCV FS+FG
Sbjct: 241 KSKISTKTSKRTQTR--SKGVTAACDVDNQEQSGRKRLYLDYTVGGHSAAVSCVAFSRFG 300

Query: 301 EKGKFIVSGGNDKCIKLWNCSGVPDAGDAGS--NNSLLHLNINLSKKVNWLCTTPSETEN 360
           EKGKFIVSGGNDKC+KLWN SGVPDAG+AGS  NN +LHLNI+L+KKVNWLCTTPS+TEN
Sbjct: 301 EKGKFIVSGGNDKCVKLWNWSGVPDAGEAGSSNNNKILHLNIDLNKKVNWLCTTPSDTEN 360

Query: 361 LIVCDTSKVVKVYTVA 374
           L+VCDTSKVVKVY VA
Sbjct: 361 LVVCDTSKVVKVYNVA 374

[Close]

BLAST of MS013543.1 vs. ExPASy TrEMBL
Match: A0A6J1EMZ7 (Cellulose synthase OS=Cucurbita moschata OX=3662 GN=LOC111434060 PE=3 SV=1)

HSP 1 Score: 678.3 bits (1749), Expect = 1.8e-191
Identity = 328/371 (88.41%), Postives = 349/371 (94.07%), Query Frame = 0


Query: 1   MSEAPPRRLRGHKATATCCIASHDRPGLVATSGEDGCVCWFDMRCKDVVSIMEVGTEPIS 60
           M+EAPPRRLRGHK TATCCIAS+DRPGLVATSGEDGCVCWFDMRCKDVVSIMEVG EPI+
Sbjct: 1   MTEAPPRRLRGHKGTATCCIASNDRPGLVATSGEDGCVCWFDMRCKDVVSIMEVGKEPIT 60

Query: 61  SICFKPGNEDVIYISSAKEIKSFDVHQATSSKPLGSYSYNKEEINQVSCSPKSSFLAAAD 120
           SICFK GNEDVIYISS KEIKSFDVHQATSSKPL SYSYNKEEINQVSCSPKSSFLAAAD
Sbjct: 61  SICFKQGNEDVIYISSGKEIKSFDVHQATSSKPLESYSYNKEEINQVSCSPKSSFLAAAD 120

Query: 121 DGGDVKIIDIHQQCLYKTLRSGHSSICSSVQFLPWRPWEVITGGLDSKLIIWDFSRGRPI 180
           DGGDVKIIDIHQ CLYKTLRSGH+SICSSVQFLPWRPWEVITGGLDSKLI+WDFSRGRPI
Sbjct: 121 DGGDVKIIDIHQNCLYKTLRSGHTSICSSVQFLPWRPWEVITGGLDSKLIMWDFSRGRPI 180

Query: 181 KVLDFGCPDNNPSSNSGQCFNPAFIHAIAVPEVNMLDKLGQICVVARGDGVVDMIDIESE 240
           KVLDF  PDNNPSSN+GQCFNPAFIHAI VPEVNM+D+LGQICVVARGDGVV +IDIESE
Sbjct: 181 KVLDFDIPDNNPSSNTGQCFNPAFIHAIVVPEVNMVDRLGQICVVARGDGVVHVIDIESE 240

Query: 241 KSKVSTK-GKRLQTRPKSKGVTAACDTDNQEETGRKNLHLDYTVGGHSAAVSCVTFSQFG 300
           KSK+STK  KR QTR  SKGVTAACD DNQE++GRK L+LDYTVGGHSAAVSCV FS+FG
Sbjct: 241 KSKISTKTSKRTQTR--SKGVTAACDGDNQEQSGRKRLYLDYTVGGHSAAVSCVAFSRFG 300

Query: 301 EKGKFIVSGGNDKCIKLWNCSGVPDAGDAGS--NNSLLHLNINLSKKVNWLCTTPSETEN 360
           EKGKFIVSGGNDKC+KLWN SGVPDAG+AGS  NN +LHLNI+L+KKVNWLCTTPS+TEN
Sbjct: 301 EKGKFIVSGGNDKCVKLWNWSGVPDAGEAGSSNNNKILHLNIDLNKKVNWLCTTPSDTEN 360

Query: 361 LIVCDTSKVVK 369
           L+VCDTSKVVK
Sbjct: 361 LVVCDTSKVVK 369

[Close]

BLAST of MS013543.1 vs. ExPASy TrEMBL
Match: A0A0A0LUL1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G470260 PE=4 SV=1)

HSP 1 Score: 676.0 bits (1743), Expect = 8.9e-191
Identity = 327/375 (87.20%), Postives = 351/375 (93.60%), Query Frame = 0


Query: 1   MSEAPPRRLRGHKATATCCIASHDRPGLVATSGEDGCVCWFDMRCKDVVSIMEVGTEPIS 60
           MS+APPRRLRGHK TATCC+AS+DRPGLVATSGEDGCVCWFDMRCKDVVSIMEVG EPIS
Sbjct: 1   MSDAPPRRLRGHKGTATCCVASNDRPGLVATSGEDGCVCWFDMRCKDVVSIMEVGKEPIS 60

Query: 61  SICFKPGNEDVIYISSAKEIKSFDVHQATSSKPLGSYSYNKEEINQVSCSPKSSFLAAAD 120
           SICFKPGNEDVIYISS KEIKSFDVHQAT+SKPLGSYSYNKEEINQVSCSPK+SFLAAAD
Sbjct: 61  SICFKPGNEDVIYISSGKEIKSFDVHQATASKPLGSYSYNKEEINQVSCSPKASFLAAAD 120

Query: 121 DGGDVKIIDIHQQCLYKTLRSGHSSICSSVQFLPWRPWEVITGGLDSKLIIWDFSRGRPI 180
           DGGDVKIID+H  CLYKTLRSGH+SICSSVQFLPWRPWEVITGGLDSKLI+WDFSRGRPI
Sbjct: 121 DGGDVKIIDVHNNCLYKTLRSGHTSICSSVQFLPWRPWEVITGGLDSKLIMWDFSRGRPI 180

Query: 181 KVLDFGCPDNNPSSNSGQCFNPAFIHAIAVPEVNMLDKLGQICVVARGDGVVDMIDIESE 240
           +VLDF  PDN+PSS++ QCFNPAFIHAIAVPEVNMLD+LGQICVVARGDG+V +IDIESE
Sbjct: 181 QVLDFDIPDNHPSSSTEQCFNPAFIHAIAVPEVNMLDRLGQICVVARGDGIVHVIDIESE 240

Query: 241 KSKVSTK-GKRLQTRPKSKGVTAACDTDNQEETGRKNLHLDYTVGGHSAAVSCVTFSQFG 300
           KSK S+K GK++Q+R  SKGVTAACD +NQE+TGRK L+LDYTVGGHSAAVSCV FSQFG
Sbjct: 241 KSKTSSKTGKKVQSR--SKGVTAACDMNNQEQTGRKKLYLDYTVGGHSAAVSCVAFSQFG 300

Query: 301 EKGKFIVSGGNDKCIKLWNCSGVPDAG-DAGSNNSLLHLNINLSKKVNWLCTTPSETENL 360
           EKGKFIVSGGNDKCIKLWN   VPDAG  + SNN +LHLNINLSKKVNWLCTTPSETENL
Sbjct: 301 EKGKFIVSGGNDKCIKLWNWCEVPDAGKTSSSNNEVLHLNINLSKKVNWLCTTPSETENL 360

Query: 361 IVCDTSKVVKVYTVA 374
           IVCDTSKVVKVY VA
Sbjct: 361 IVCDTSKVVKVYNVA 373

[Close]

BLAST of MS013543.1 vs. ExPASy TrEMBL
Match: A0A1S3BF87 (Cellulose synthase OS=Cucumis melo OX=3656 GN=LOC103489350 PE=3 SV=1)

HSP 1 Score: 672.5 bits (1734), Expect = 9.8e-190
Identity = 325/375 (86.67%), Postives = 348/375 (92.80%), Query Frame = 0


Query: 1   MSEAPPRRLRGHKATATCCIASHDRPGLVATSGEDGCVCWFDMRCKDVVSIMEVGTEPIS 60
           MSEAPPRRLRGHK TATCC+AS+DRPGLVATSGEDGCVCWFD+RCKDVVSIMEVG EPIS
Sbjct: 1   MSEAPPRRLRGHKGTATCCVASNDRPGLVATSGEDGCVCWFDLRCKDVVSIMEVGKEPIS 60

Query: 61  SICFKPGNEDVIYISSAKEIKSFDVHQATSSKPLGSYSYNKEEINQVSCSPKSSFLAAAD 120
           SICFKPGNE VIYISS KEIKSFDVHQAT+SKPLGSYSYNKEEINQVSCSPK+SFLAAAD
Sbjct: 61  SICFKPGNEKVIYISSGKEIKSFDVHQATASKPLGSYSYNKEEINQVSCSPKASFLAAAD 120

Query: 121 DGGDVKIIDIHQQCLYKTLRSGHSSICSSVQFLPWRPWEVITGGLDSKLIIWDFSRGRPI 180
           DGGDVKIID+H  CLYKTLRSGH+SICSSVQFLPWRPWEVITGGLDSKLI+WDFSRGRPI
Sbjct: 121 DGGDVKIIDVHNNCLYKTLRSGHTSICSSVQFLPWRPWEVITGGLDSKLIMWDFSRGRPI 180

Query: 181 KVLDFGCPDNNPSSNSGQCFNPAFIHAIAVPEVNMLDKLGQICVVARGDGVVDMIDIESE 240
           +VLDF  PDN+PSS++GQCFNPAFIHAIAVPEVNMLD+LGQICVVARGDG+V +IDIE+E
Sbjct: 181 QVLDFDIPDNHPSSSTGQCFNPAFIHAIAVPEVNMLDRLGQICVVARGDGIVHVIDIETE 240

Query: 241 KSKVSTKG-KRLQTRPKSKGVTAACDTDNQEETGRKNLHLDYTVGGHSAAVSCVTFSQFG 300
           KSK S+K  K++QTR  SKGV AACD DNQE+TGRK L+LDYTVGGHSAAVSCV FSQFG
Sbjct: 241 KSKTSSKTVKKVQTR--SKGVAAACDMDNQEQTGRKRLYLDYTVGGHSAAVSCVAFSQFG 300

Query: 301 EKGKFIVSGGNDKCIKLWNCSGVPDAG-DAGSNNSLLHLNINLSKKVNWLCTTPSETENL 360
           EKGKFIVSGGNDKCIKLWN   VPD G  + SNN +LHLNINLSKKVNWLCTTPSETENL
Sbjct: 301 EKGKFIVSGGNDKCIKLWNWREVPDGGKTSSSNNEILHLNINLSKKVNWLCTTPSETENL 360

Query: 361 IVCDTSKVVKVYTVA 374
           IVCDTSKVVKVY VA
Sbjct: 361 IVCDTSKVVKVYNVA 373

[Close]

BLAST of MS013543.1 vs. TAIR 10
Match: AT5G45760.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 506.9 bits (1304), Expect = 1.4e-143
Identity = 234/370 (63.24%), Postives = 296/370 (80.00%), Query Frame = 0


Query: 6   PRRLRGHKATATCCIASHDRPGLVATSGEDGCVCWFDMRCKDVVSIMEVGTEPISSICFK 65
           PR+LRGHK+TATCCIAS DRPG+V TSGEDGC+CWFD+RCKDV  I++VGTEP+SS+CFK
Sbjct: 8   PRKLRGHKSTATCCIASRDRPGIVLTSGEDGCICWFDLRCKDVQFIIDVGTEPVSSLCFK 67

Query: 66  PGNEDVIYISSAKEIKSFDVH--QATSSKPLGSYSYNKEEINQVSCSPKSSFLAAADDGG 125
            GNE+++Y S   EIKSFDVH   ATS KPL SY+YNK+E+NQV C+ +SSFLA+ADD G
Sbjct: 68  TGNENILYASCGNEIKSFDVHTLSATSWKPLESYNYNKDEVNQVVCNGRSSFLASADDSG 127

Query: 126 DVKIIDIHQQCLYKTLRSGHSSICSSVQFLPWRPWEVITGGLDSKLIIWDFSRGRPIKVL 185
           DVKIID+ Q+CLYKTLR+GH+SICSSVQF+PWRPWEVITGGLDSKL++WDFS+GR  K++
Sbjct: 128 DVKIIDLGQKCLYKTLRAGHTSICSSVQFIPWRPWEVITGGLDSKLVLWDFSKGRSQKII 187

Query: 186 DFGCPDNNPSSNSGQCFNPAFIHAIAVPEVNMLDKLGQICVVARGDGVVDMIDIESEKSK 245
           DFG   NN   NSGQC NPAF+H+IA+PE++M+DKL +IC VARGDG+V++I+IESE S+
Sbjct: 188 DFGSDTNN---NSGQCLNPAFVHSIAIPEMDMVDKLDKICAVARGDGIVNLINIESELSR 247

Query: 246 VSTKGKRLQTRPKSKGVTAACDTDNQEETGRKNLHLDYTVGGHSAAVSCVTFSQFGEKGK 305
             T  K   +   +  V   C              LDY+VGGH++AVSCV FS F EKG+
Sbjct: 248 KGTSSKGSSSSSSNNVVKRVC--------------LDYSVGGHNSAVSCVAFSLFQEKGR 307

Query: 306 FIVSGGNDKCIKLWNCSGVPDAGDAGSNNSLLHLNINLSKKVNWLCTTPSETENLIVCDT 365
           F++SGGNDK +K+W+C    D  +  +N+ LLHLNINLSKKVNWLCT  S++ENL+VCDT
Sbjct: 308 FLISGGNDKTVKIWDCFKCLDPNNNNNNSDLLHLNINLSKKVNWLCTNQSDSENLVVCDT 360

Query: 366 SKVVKVYTVA 374
           ++VVKVY+++
Sbjct: 368 TRVVKVYSIS 360

[Close]

BLAST of MS013543.1 vs. TAIR 10
Match: AT5G45760.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 447.6 bits (1150), Expect = 9.9e-126
Identity = 215/370 (58.11%), Postives = 272/370 (73.51%), Query Frame = 0


Query: 6   PRRLRGHKATATCCIASHDRPGLVATSGEDGCVCWFDMRCKDVVSIMEVGTEPISSICFK 65
           PR+LRGHK+TATCCIAS DRPG+V TSGEDGC+CWFD+RCKDV  I++VGTEP+SS+CFK
Sbjct: 8   PRKLRGHKSTATCCIASRDRPGIVLTSGEDGCICWFDLRCKDVQFIIDVGTEPVSSLCFK 67

Query: 66  PGNEDVIYISSAKEIKSFDVH--QATSSKPLGSYSYNKEEINQVSCSPKSSFLAAADDGG 125
            GNE+++Y S   EIKSFDVH   ATS KPL SY+YNK+E+NQV C+ +SSFLA+ADD G
Sbjct: 68  TGNENILYASCGNEIKSFDVHTLSATSWKPLESYNYNKDEVNQVVCNGRSSFLASADDSG 127

Query: 126 DVKIIDIHQQCLYKTLRSGHSSICSSVQFLPWRPWEVITGGLDSKLIIWDFSRGRPIKVL 185
           DVKIID+ Q+CLYKTLR+GH+SICSSVQF+PWRPWE                        
Sbjct: 128 DVKIIDLGQKCLYKTLRAGHTSICSSVQFIPWRPWE------------------------ 187

Query: 186 DFGCPDNNPSSNSGQCFNPAFIHAIAVPEVNMLDKLGQICVVARGDGVVDMIDIESEKSK 245
             G   NN   NSGQC NPAF+H+IA+PE++M+DKL +IC VARGDG+V++I+IESE S+
Sbjct: 188 --GSDTNN---NSGQCLNPAFVHSIAIPEMDMVDKLDKICAVARGDGIVNLINIESELSR 247

Query: 246 VSTKGKRLQTRPKSKGVTAACDTDNQEETGRKNLHLDYTVGGHSAAVSCVTFSQFGEKGK 305
             T  K   +   +  V   C              LDY+VGGH++AVSCV FS F EKG+
Sbjct: 248 KGTSSKGSSSSSSNNVVKRVC--------------LDYSVGGHNSAVSCVAFSLFQEKGR 307

Query: 306 FIVSGGNDKCIKLWNCSGVPDAGDAGSNNSLLHLNINLSKKVNWLCTTPSETENLIVCDT 365
           F++SGGNDK +K+W+C    D  +  +N+ LLHLNINLSKKVNWLCT  S++ENL+VCDT
Sbjct: 308 FLISGGNDKTVKIWDCFKCLDPNNNNNNSDLLHLNINLSKKVNWLCTNQSDSENLVVCDT 334

Query: 366 SKVVKVYTVA 374
           ++VVKVY+++
Sbjct: 368 TRVVKVYSIS 334

[Close]

BLAST of MS013543.1 vs. TAIR 10
Match: AT1G61210.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 68.6 bits (166), Expect = 1.2e-11
Identity = 51/185 (27.57%), Postives = 88/185 (47.57%), Query Frame = 0


Query: 12  HKATATCCIASHDRPGLVATSGEDGCV-CWFDMRCKDVVSIMEVGTEPISSICFKPGNED 71
           H A   C         L  T G+D  V  W   +   ++S+    T  + S+ F      
Sbjct: 14  HSANVNCLSIGKKTSRLFITGGDDYKVNLWAIGKPTSLMSLCG-HTSAVDSVAFDSAEVL 73

Query: 72  VIYISSAKEIKSFDVHQATSSKPLGSYSYNKEEINQVSCSPKSSFLAAADDGGDVKIIDI 131
           V+  +S+  IK +DV +A   K + +++ ++   + V   P   FLA+     ++KI DI
Sbjct: 74  VLAGASSGVIKLWDVEEA---KMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDI 133

Query: 132 HQQCLYKTLRSGHSSICSSVQFLPWRPWEVITGGLDSKLIIWDFSRGR----------PI 186
            ++   +T + GHS   S+++F P   W V++GGLD+ + +WD + G+          PI
Sbjct: 134 RKKGCIQTYK-GHSRGISTIRFTPDGRW-VVSGGLDNVVKVWDLTAGKLLHEFKFHEGPI 192

[Close]

BLAST of MS013543.1 vs. TAIR 10
Match: AT1G61210.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 68.6 bits (166), Expect = 1.2e-11
Identity = 51/185 (27.57%), Postives = 88/185 (47.57%), Query Frame = 0


Query: 12  HKATATCCIASHDRPGLVATSGEDGCV-CWFDMRCKDVVSIMEVGTEPISSICFKPGNED 71
           H A   C         L  T G+D  V  W   +   ++S+    T  + S+ F      
Sbjct: 14  HSANVNCLSIGKKTSRLFITGGDDYKVNLWAIGKPTSLMSLCG-HTSAVDSVAFDSAEVL 73

Query: 72  VIYISSAKEIKSFDVHQATSSKPLGSYSYNKEEINQVSCSPKSSFLAAADDGGDVKIIDI 131
           V+  +S+  IK +DV +A   K + +++ ++   + V   P   FLA+     ++KI DI
Sbjct: 74  VLAGASSGVIKLWDVEEA---KMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDI 133

Query: 132 HQQCLYKTLRSGHSSICSSVQFLPWRPWEVITGGLDSKLIIWDFSRGR----------PI 186
            ++   +T + GHS   S+++F P   W V++GGLD+ + +WD + G+          PI
Sbjct: 134 RKKGCIQTYK-GHSRGISTIRFTPDGRW-VVSGGLDNVVKVWDLTAGKLLHEFKFHEGPI 192

[Close]

BLAST of MS013543.1 vs. TAIR 10
Match: AT3G49660.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 68.6 bits (166), Expect = 1.2e-11
Identity = 74/326 (22.70%), Postives = 133/326 (40.80%), Query Frame = 0


Query: 59  ISSICFKPGNEDVIYISSAKEIKSFDVHQATS--SKPLGSYSYNKEEINQVSCSPKSSFL 118
           +SS+ F      +   S+ K I+++ ++      ++P+  ++ ++  I+ V+ S  + F+
Sbjct: 27  VSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFI 86

Query: 119 AAADDGGDVKIIDIHQQCLYKTLRSGHSSICSSVQFLPWRPWEVITGGLDSKLIIWDFSR 178
            +A D   +K+ D+    L KTL  GH++    V F P +   +++G  D  + IWD + 
Sbjct: 87  VSASDDKTLKLWDVETGSLIKTL-IGHTNYAFCVNFNP-QSNMIVSGSFDETVRIWDVTT 146

Query: 179 GRPIKVLDFGCPDNNPSSNSGQCFNPAFIHAIAVPEVNMLDKLGQICVVARGDGVVDMID 238
           G+ +KVL                  PA    +   + N   + G + V +  DG+  + D
Sbjct: 147 GKCLKVL------------------PAHSDPVTAVDFN---RDGSLIVSSSYDGLCRIWD 206

Query: 239 ----------IESEKSKVSTKGKRLQTRPKSKGVTAACDTDNQEETGRKNLHLDYTVGGH 298
                     I+ E   VS     ++  P  K +      +        +     T  GH
Sbjct: 207 SGTGHCVKTLIDDENPPVSF----VRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGH 266

Query: 299 SAAVSCVTFSQFGEKGKFIVSGGNDKCIKLWNCSGVPDAGDAGSNNSLLHLNINLSKKVN 358
             A  C++ +     GK IVSG  D C+ +W         +  S   L  L  +    +N
Sbjct: 267 VNAQYCISSAFSVTNGKRIVSGSEDNCVHMW---------ELNSKKLLQKLEGHTETVMN 313

Query: 359 WLCTTPSETENLIVCDT-SKVVKVYT 372
             C     TENLI   +  K V+++T
Sbjct: 327 VAC---HPTENLIASGSLDKTVRIWT 313

The following BLAST results are available for this feature:

BLAST of MS013543.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140168.1	1.0e-217	99.20	cellulose synthase A catalytic subunit 8 [UDP-forming] [Momordica charantia]	[more]
XP_023001639.1	2.3e-193	88.30	cellulose synthase A catalytic subunit 8 [UDP-forming]-like [Cucurbita maxima]	[more]
XP_038895617.1	6.7e-193	89.07	WD repeat-containing protein 53 [Benincasa hispida]	[more]
XP_022927120.1	3.7e-191	88.41	cellulose synthase A catalytic subunit 8 [UDP-forming]-like [Cucurbita moschata]	[more]
XP_023520223.1	6.3e-191	87.77	cellulose synthase A catalytic subunit 8 [UDP-forming]-like [Cucurbita pepo subs...	[more]

BLAST of MS013543.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9DB94	1.9e-28	26.33	WD repeat-containing protein 53 OS=Mus musculus OX=10090 GN=Wdr53 PE=1 SV=1	[more]
Q32KQ2	6.0e-27	25.57	WD repeat-containing protein 53 OS=Bos taurus OX=9913 GN=WDR53 PE=2 SV=1	[more]
Q7Z5U6	1.9e-25	26.88	WD repeat-containing protein 53 OS=Homo sapiens OX=9606 GN=WDR53 PE=2 SV=1	[more]
Q54BI5	1.3e-21	24.68	WD repeat-containing protein 53 homolog OS=Dictyostelium discoideum OX=44689 GN=...	[more]
Q9M2Z2	1.8e-10	22.70	COMPASS-like H3K4 histone methylase component WDR5A OS=Arabidopsis thaliana OX=3...	[more]

BLAST of MS013543.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CHE3	5.0e-218	99.20	Cellulose synthase OS=Momordica charantia OX=3673 GN=LOC111010900 PE=3 SV=1	[more]
A0A6J1KNA5	1.1e-193	88.30	Cellulose synthase OS=Cucurbita maxima OX=3661 GN=LOC111495711 PE=3 SV=1	[more]
A0A6J1EMZ7	1.8e-191	88.41	Cellulose synthase OS=Cucurbita moschata OX=3662 GN=LOC111434060 PE=3 SV=1	[more]
A0A0A0LUL1	8.9e-191	87.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G470260 PE=4 SV=1	[more]
A0A1S3BF87	9.8e-190	86.67	Cellulose synthase OS=Cucumis melo OX=3656 GN=LOC103489350 PE=3 SV=1	[more]

BLAST of MS013543.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G45760.1	1.4e-143	63.24	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G45760.2	9.9e-126	58.11	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G61210.1	1.2e-11	27.57	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G61210.2	1.2e-11	27.57	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G49660.1	1.2e-11	22.70	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 45..84 e-value: 290.0 score: 1.5 coord: 276..318 e-value: 4.8E-7 score: 39.4 coord: 132..173 e-value: 4.0E-4 score: 29.7 coord: 331..371 e-value: 140.0 score: 3.5 coord: 2..42 e-value: 4.5E-4 score: 29.5 coord: 90..129 e-value: 0.096 score: 21.8
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 137..173 e-value: 0.0094 score: 16.8 coord: 281..318 e-value: 8.7E-5 score: 23.2
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 140..182 score: 9.372231
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 283..318 score: 11.778342
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 207..373 e-value: 8.5E-12 score: 46.5
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 2..206 e-value: 3.1E-29 score: 104.2
None	No IPR available	PANTHER	PTHR45296	TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN	coord: 2..372
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 283..318 score: 9.836508
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 160..174
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 6..371

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS013543	MS013543	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS013543.1-cds	MS013543.1-cds-scaffold402:2321664..2321765	CDS
MS013543.1-cds	MS013543.1-cds-scaffold402:2322291..2322387	CDS
MS013543.1-cds	MS013543.1-cds-scaffold402:2322715..2322776	CDS
MS013543.1-cds	MS013543.1-cds-scaffold402:2323017..2323073	CDS
MS013543.1-cds	MS013543.1-cds-scaffold402:2323304..2323363	CDS
MS013543.1-cds	MS013543.1-cds-scaffold402:2323775..2323831	CDS
MS013543.1-cds	MS013543.1-cds-scaffold402:2323970..2324012	CDS
MS013543.1-cds	MS013543.1-cds-scaffold402:2325224..2325305	CDS
MS013543.1-cds	MS013543.1-cds-scaffold402:2325721..2326038	CDS
MS013543.1-cds	MS013543.1-cds-scaffold402:2326104..2326257	CDS
MS013543.1-cds	MS013543.1-cds-scaffold402:2326352..2326438	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS013543.1	MS013543.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding