Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACGGGTGTAAGGTAATAGAGAATTTGGATTCTCTCTGGTTCTTCGGAACGACGGCGCCGGCCATCCAAGAGCTCGAAAATCCCACCCTAAACGACGTCGAAGGAGAAGAAATCGCGACACCCATGCGCGAGAATAACAATGCAGTACTGGAAGATCAAGATTGTGGGTTTGGGTTTGGGTGTGAAACGAAAACAGAGGTGGAAATTAGTACGAAAGAAGAGAAGAGGAGATCAAGAAGCAGAATAAGGAGATCATCGTGTTCATGTCTGAGGCAGAGGAGAAAAATCCTTGGAGAAATAGATCTGAATTTTGTCGTAAAGGAGATTTCTGAATGTTGGATGTTTGAAGAACAGAGAATTAGGGGTGAAATTTACAAGAAGAAGAAGATGCCTCCGTTTGAAGACAGTATGGCGATGAAAGAGCACATCAGATCGTGGGCTTATGCAGTGGCCTGCACTGTCAGA
mRNA sequence
ATGAACGGGTGTAAGGTAATAGAGAATTTGGATTCTCTCTGGTTCTTCGGAACGACGGCGCCGGCCATCCAAGAGCTCGAAAATCCCACCCTAAACGACGTCGAAGGAGAAGAAATCGCGACACCCATGCGCGAGAATAACAATGCAGTACTGGAAGATCAAGATTGTGGGTTTGGGTTTGGGTGTGAAACGAAAACAGAGGTGGAAATTAGTACGAAAGAAGAGAAGAGGAGATCAAGAAGCAGAATAAGGAGATCATCGTGTTCATGTCTGAGGCAGAGGAGAAAAATCCTTGGAGAAATAGATCTGAATTTTGTCGTAAAGGAGATTTCTGAATGTTGGATGTTTGAAGAACAGAGAATTAGGGGTGAAATTTACAAGAAGAAGAAGATGCCTCCGTTTGAAGACAGTATGGCGATGAAAGAGCACATCAGATCGTGGGCTTATGCAGTGGCCTGCACTGTCAGA
Coding sequence (CDS)
ATGAACGGGTGTAAGGTAATAGAGAATTTGGATTCTCTCTGGTTCTTCGGAACGACGGCGCCGGCCATCCAAGAGCTCGAAAATCCCACCCTAAACGACGTCGAAGGAGAAGAAATCGCGACACCCATGCGCGAGAATAACAATGCAGTACTGGAAGATCAAGATTGTGGGTTTGGGTTTGGGTGTGAAACGAAAACAGAGGTGGAAATTAGTACGAAAGAAGAGAAGAGGAGATCAAGAAGCAGAATAAGGAGATCATCGTGTTCATGTCTGAGGCAGAGGAGAAAAATCCTTGGAGAAATAGATCTGAATTTTGTCGTAAAGGAGATTTCTGAATGTTGGATGTTTGAAGAACAGAGAATTAGGGGTGAAATTTACAAGAAGAAGAAGATGCCTCCGTTTGAAGACAGTATGGCGATGAAAGAGCACATCAGATCGTGGGCTTATGCAGTGGCCTGCACTGTCAGA
Protein sequence
MNGCKVIENLDSLWFFGTTAPAIQELENPTLNDVEGEEIATPMRENNNAVLEDQDCGFGFGCETKTEVEISTKEEKRRSRSRIRRSSCSCLRQRRKILGEIDLNFVVKEISECWMFEEQRIRGEIYKKKKMPPFEDSMAMKEHIRSWAYAVACTVR
Homology
BLAST of MS013542.1 vs. NCBI nr
Match:
XP_022140112.1 (uncharacterized protein LOC111010848 [Momordica charantia])
HSP 1 Score: 315.1 bits (806), Expect = 3.4e-82
Identity = 154/156 (98.72%), Postives = 155/156 (99.36%), Query Frame = 0
Query: 1 MNGCKVIENLDSLWFFGTTAPAIQELENPTLNDVEGEEIATPMRENNNAVLEDQDCGFGF 60
MNGCKVIENLDSLWFFGTTAPAIQELENPTLNDVEGEEIATPMRENNNAVLEDQD GFGF
Sbjct: 1 MNGCKVIENLDSLWFFGTTAPAIQELENPTLNDVEGEEIATPMRENNNAVLEDQDGGFGF 60
Query: 61 GCETKTEVEISTKEEKRRSRSRIRRSSCSCLRQRRKILGEIDLNFVVKEISECWMFEEQR 120
GCETKTEVEISTKEEKRRSRSRIRRSSCSCLRQRRKILGEIDLNFVVKEISECWMFEEQR
Sbjct: 61 GCETKTEVEISTKEEKRRSRSRIRRSSCSCLRQRRKILGEIDLNFVVKEISECWMFEEQR 120
Query: 121 IRGEIYKKKKMPPFEDSMAMKEHIRSWAYAVACTVR 157
IRGE+YKKKKMPPFEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 IRGEVYKKKKMPPFEDSMAMKEHIRSWAYAVACTVR 156
BLAST of MS013542.1 vs. NCBI nr
Match:
XP_038895160.1 (uncharacterized protein LOC120083464 [Benincasa hispida])
HSP 1 Score: 150.2 bits (378), Expect = 1.5e-32
Identity = 91/174 (52.30%), Postives = 109/174 (62.64%), Query Frame = 0
Query: 1 MNGCKVIENLDSLWFFGTT-------APAIQELENPTLNDV---EGEEIATPMRENNNAV 60
M G +V+EN DSLWFF T P +ENPT ND GEEIATP+ N
Sbjct: 1 MEGQQVLENWDSLWFFATVFSNRTPPPPPPPVVENPTQNDFVEPPGEEIATPLTPNEQNN 60
Query: 61 LEDQ---DCGFGFGCETKTEVEISTKEEKRRSRSRIRRSSCSCLRQRRKILGEIDLNFVV 120
+ D+ + G GFG +T+ KE++R++R R C L QRRKI+GE+DL++ V
Sbjct: 61 VGDEKKIENGGGFGIKTE------EKEQRRKNRGR----RCWGLEQRRKIVGEMDLSYAV 120
Query: 121 KEISECWMFEEQRIRG-----EIYKKKKMPPFEDSMAMKEHIRSWAYAVACTVR 157
KEI ECW+FEE RI G K KKMPPFEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 KEICECWLFEETRIGGGNQYQRKKKTKKMPPFEDSMAMKEHIRSWAYAVACTVR 164
BLAST of MS013542.1 vs. NCBI nr
Match:
KAG6583945.1 (hypothetical protein SDJN03_19877, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 136.3 bits (342), Expect = 2.2e-28
Identity = 84/174 (48.28%), Postives = 105/174 (60.34%), Query Frame = 0
Query: 1 MNGCKVIENLDSLWFFGTT--------APAIQELENPTLNDVE---GEEIATPMRENNNA 60
M +V++NLDSLWFF T P ++ PT ND + G EIATP+ +N
Sbjct: 1 MEDQQVLQNLDSLWFFATVFSNRTPPPPPPPPVVQKPTQNDFDEPPGGEIATPIFQNQQN 60
Query: 61 VLEDQDCGFGFGCETKTEVEISTKEEKRRSRSRIRRSSCSCLRQRRKILGEIDLNFVVKE 120
V E+++ ET + + EE+R+SR R CL QRRKI+GE+DL+ VKE
Sbjct: 61 VGEERNIVDEKTNETGGGLGLIITEERRKSRGR----RWGCLGQRRKIVGEMDLSDAVKE 120
Query: 121 ISECWMFEEQRIRGEIY-------KKKKMPPFEDSMAMKEHIRSWAYAVACTVR 157
I ECW+ E++ G Y KKKKMPPFEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 ICECWLLEQRIGGGNQYRRGRRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR 170
BLAST of MS013542.1 vs. NCBI nr
Match:
KAG7019562.1 (hypothetical protein SDJN02_18523, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 136.3 bits (342), Expect = 2.2e-28
Identity = 84/171 (49.12%), Postives = 105/171 (61.40%), Query Frame = 0
Query: 1 MNGCKVIENLDSLWFFGT-----TAPAIQELENPTLNDV---EGEEIATPMRENNNAVLE 60
M +V++NLDSLWFF T T P ++ PT +D G EIATP+ +N V E
Sbjct: 1 MEDQQVLQNLDSLWFFATVFSNRTPPPPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGE 60
Query: 61 DQDCGFGFGCETKTEVEISTKEEKRRSRSRIRRSSCSCLRQRRKILGEIDLNFVVKEISE 120
+++ ET + + EE+R+SR R CL QRRKI+GE+DL+ VKEI E
Sbjct: 61 ERNIVDEKTNETGGGLGLIITEERRKSRGR----RWGCLGQRRKIVGEMDLSDAVKEICE 120
Query: 121 CWMFEEQRIRGEIY-------KKKKMPPFEDSMAMKEHIRSWAYAVACTVR 157
CW+ E++ G Y KKKKMPPFEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 CWLLEQRIGGGNQYRRGRRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR 167
BLAST of MS013542.1 vs. NCBI nr
Match:
XP_022927166.1 (uncharacterized protein LOC111434099 [Cucurbita moschata])
HSP 1 Score: 134.8 bits (338), Expect = 6.4e-28
Identity = 84/171 (49.12%), Postives = 106/171 (61.99%), Query Frame = 0
Query: 1 MNGCKVIENLDSLWFFGT-----TAPAIQELENPTLNDV---EGEEIATPMRENNNAVLE 60
M +V++NLDSLWFF T T P + ++ PT +D G EIATP+ +N V E
Sbjct: 1 MEDQQVLQNLDSLWFFATVFSNRTPPPV--VQKPTQHDFVEPPGGEIATPIFQNQQNVGE 60
Query: 61 DQDCGFGFGCETKTEVEISTKEEKRRSRSRIRRSSCSCLRQRRKILGEIDLNFVVKEISE 120
+++ ET + + EE+R+SR R CL QRRKI+GE+DL+ VKEI E
Sbjct: 61 ERNIVDEKTNETGGGLGLIITEERRKSRGR----RWGCLGQRRKIVGEMDLSDAVKEICE 120
Query: 121 CWMFEEQRIRGEIY-------KKKKMPPFEDSMAMKEHIRSWAYAVACTVR 157
CW+ E++ G Y KKKKMPPFEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 CWLLEQRIGGGNQYQRGGRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR 165
BLAST of MS013542.1 vs. ExPASy TrEMBL
Match:
A0A6J1CFW9 (uncharacterized protein LOC111010848 OS=Momordica charantia OX=3673 GN=LOC111010848 PE=4 SV=1)
HSP 1 Score: 315.1 bits (806), Expect = 1.7e-82
Identity = 154/156 (98.72%), Postives = 155/156 (99.36%), Query Frame = 0
Query: 1 MNGCKVIENLDSLWFFGTTAPAIQELENPTLNDVEGEEIATPMRENNNAVLEDQDCGFGF 60
MNGCKVIENLDSLWFFGTTAPAIQELENPTLNDVEGEEIATPMRENNNAVLEDQD GFGF
Sbjct: 1 MNGCKVIENLDSLWFFGTTAPAIQELENPTLNDVEGEEIATPMRENNNAVLEDQDGGFGF 60
Query: 61 GCETKTEVEISTKEEKRRSRSRIRRSSCSCLRQRRKILGEIDLNFVVKEISECWMFEEQR 120
GCETKTEVEISTKEEKRRSRSRIRRSSCSCLRQRRKILGEIDLNFVVKEISECWMFEEQR
Sbjct: 61 GCETKTEVEISTKEEKRRSRSRIRRSSCSCLRQRRKILGEIDLNFVVKEISECWMFEEQR 120
Query: 121 IRGEIYKKKKMPPFEDSMAMKEHIRSWAYAVACTVR 157
IRGE+YKKKKMPPFEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 IRGEVYKKKKMPPFEDSMAMKEHIRSWAYAVACTVR 156
BLAST of MS013542.1 vs. ExPASy TrEMBL
Match:
A0A6J1EGY0 (uncharacterized protein LOC111434099 OS=Cucurbita moschata OX=3662 GN=LOC111434099 PE=4 SV=1)
HSP 1 Score: 134.8 bits (338), Expect = 3.1e-28
Identity = 84/171 (49.12%), Postives = 106/171 (61.99%), Query Frame = 0
Query: 1 MNGCKVIENLDSLWFFGT-----TAPAIQELENPTLNDV---EGEEIATPMRENNNAVLE 60
M +V++NLDSLWFF T T P + ++ PT +D G EIATP+ +N V E
Sbjct: 1 MEDQQVLQNLDSLWFFATVFSNRTPPPV--VQKPTQHDFVEPPGGEIATPIFQNQQNVGE 60
Query: 61 DQDCGFGFGCETKTEVEISTKEEKRRSRSRIRRSSCSCLRQRRKILGEIDLNFVVKEISE 120
+++ ET + + EE+R+SR R CL QRRKI+GE+DL+ VKEI E
Sbjct: 61 ERNIVDEKTNETGGGLGLIITEERRKSRGR----RWGCLGQRRKIVGEMDLSDAVKEICE 120
Query: 121 CWMFEEQRIRGEIY-------KKKKMPPFEDSMAMKEHIRSWAYAVACTVR 157
CW+ E++ G Y KKKKMPPFEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 CWLLEQRIGGGNQYQRGGRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR 165
BLAST of MS013542.1 vs. ExPASy TrEMBL
Match:
A0A6J1KF61 (uncharacterized protein LOC111495257 OS=Cucurbita maxima OX=3661 GN=LOC111495257 PE=4 SV=1)
HSP 1 Score: 133.3 bits (334), Expect = 9.0e-28
Identity = 86/184 (46.74%), Postives = 109/184 (59.24%), Query Frame = 0
Query: 1 MNGCKVIENLDSLWFFGTT----------APAIQELENPTLND---VEGEEIATPMRENN 60
M +V++NLDSLWFF T +P ++ PT ND + G EIATP+ +N
Sbjct: 1 MEDQQVLQNLDSLWFFATVFSNKMPPAPPSPPTPVVQKPTENDFVELPGGEIATPIFQNQ 60
Query: 61 NAVLEDQ--------DCGFGFGCETKTEVEISTKEEKRRSRSRIRRSSCSCLRQRRKILG 120
V +++ + G GFG I T EE+R+SR R CLRQRR+I+G
Sbjct: 61 QNVGDERNIVDEKTNETGGGFG-------SIIT-EERRKSRGR----RWGCLRQRREIVG 120
Query: 121 EIDLNFVVKEISECWMFEEQRIRGEIY-------KKKKMPPFEDSMAMKEHIRSWAYAVA 157
E+DL+ VKEI ECW+ E++ G Y KKKK+PPFEDSMAMKEHIRSWAYAVA
Sbjct: 121 EMDLSDAVKEICECWLLEQRIGGGNQYQRGRRKMKKKKIPPFEDSMAMKEHIRSWAYAVA 172
BLAST of MS013542.1 vs. ExPASy TrEMBL
Match:
A0A5A7UQZ2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002450 PE=4 SV=1)
HSP 1 Score: 132.1 bits (331), Expect = 2.0e-27
Identity = 92/165 (55.76%), Postives = 104/165 (63.03%), Query Frame = 0
Query: 1 MNGCKVIENLDSLWFFGT-----TAPAIQELENPTLND-VE--GEEIATPMRENNNAVLE 60
M G +V EN DSLWFF T T P + E P ND VE GEEIATP+ N E
Sbjct: 1 MEGQQVFENFDSLWFFSTVFSNRTPPVV---EKPIQNDFVEPLGEEIATPITRN-----E 60
Query: 61 DQDCGFGFGCETKTEVEISTKEEKRRSRSRIRRSSCSCLRQRRK-ILGEIDLNFVVKEIS 120
+ D G + E+E EEKRR ++R RRS L QRRK ++GEIDL++ VKEI
Sbjct: 61 ENDVG------EEKEMETEEMEEKRR-KNRGRRS--WGLEQRRKFVVGEIDLSYAVKEIC 120
Query: 121 ECWMFEEQRIRGEIYKKKKMPPFEDSMAMKEHIRSWAYAVACTVR 157
ECW FE RI G K KKMP FEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 ECWSFEVMRIGGG-KKTKKMPSFEDSMAMKEHIRSWAYAVACTVR 147
BLAST of MS013542.1 vs. ExPASy TrEMBL
Match:
A0A1S3B8X4 (uncharacterized protein LOC103487056 OS=Cucumis melo OX=3656 GN=LOC103487056 PE=4 SV=1)
HSP 1 Score: 132.1 bits (331), Expect = 2.0e-27
Identity = 92/165 (55.76%), Postives = 104/165 (63.03%), Query Frame = 0
Query: 1 MNGCKVIENLDSLWFFGT-----TAPAIQELENPTLND-VE--GEEIATPMRENNNAVLE 60
M G +V EN DSLWFF T T P + E P ND VE GEEIATP+ N E
Sbjct: 1 MEGQQVFENFDSLWFFSTVFSNRTPPVV---EKPIQNDFVEPLGEEIATPITRN-----E 60
Query: 61 DQDCGFGFGCETKTEVEISTKEEKRRSRSRIRRSSCSCLRQRRK-ILGEIDLNFVVKEIS 120
+ D G + E+E EEKRR ++R RRS L QRRK ++GEIDL++ VKEI
Sbjct: 61 ENDVG------EEKEMETEEMEEKRR-KNRGRRS--WGLEQRRKFVVGEIDLSYAVKEIC 120
Query: 121 ECWMFEEQRIRGEIYKKKKMPPFEDSMAMKEHIRSWAYAVACTVR 157
ECW FE RI G K KKMP FEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 ECWSFEVMRIGGG-KKTKKMPSFEDSMAMKEHIRSWAYAVACTVR 147
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022140112.1 | 3.4e-82 | 98.72 | uncharacterized protein LOC111010848 [Momordica charantia] | [more] |
| XP_038895160.1 | 1.5e-32 | 52.30 | uncharacterized protein LOC120083464 [Benincasa hispida] | [more] |
| KAG6583945.1 | 2.2e-28 | 48.28 | hypothetical protein SDJN03_19877, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KAG7019562.1 | 2.2e-28 | 49.12 | hypothetical protein SDJN02_18523, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| XP_022927166.1 | 6.4e-28 | 49.12 | uncharacterized protein LOC111434099 [Cucurbita moschata] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1CFW9 | 1.7e-82 | 98.72 | uncharacterized protein LOC111010848 OS=Momordica charantia OX=3673 GN=LOC111010... | [more] |
| A0A6J1EGY0 | 3.1e-28 | 49.12 | uncharacterized protein LOC111434099 OS=Cucurbita moschata OX=3662 GN=LOC1114340... | [more] |
| A0A6J1KF61 | 9.0e-28 | 46.74 | uncharacterized protein LOC111495257 OS=Cucurbita maxima OX=3661 GN=LOC111495257... | [more] |
| A0A5A7UQZ2 | 2.0e-27 | 55.76 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A1S3B8X4 | 2.0e-27 | 55.76 | uncharacterized protein LOC103487056 OS=Cucumis melo OX=3656 GN=LOC103487056 PE=... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
