MS013489.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS013489.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	scaffold402: 1921660 .. 1922298 (-)
Sequence length	639
RNA-Seq Expression	MS013489.1
Synteny	MS013489.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGAAAAACGGCTTAAATTGGAGCATGGATCGCTACAAAACGAGGCTGTTCGAGAAGGCAATGCTTCATCAGCCGAAGACTCACTGAGCTCTCCCATGTTTCTTCATTTGCCCCAAACCAACGACACCTCCATGCTCCACGAAAGCAGCGAACCTCCGCTCGAGTTCCTCTCATCTTCCCCTGAATTTCCGCTATCCCCTCCAAAATCGGAATCCAATCATCCGAAGCCCGTCGATTTTGGCCAAAATCAGCCGCTAGATGACATCCAACGCCTGATTCAACTCCTAGGGCTTGGAGATTTATATGGCGAAAAAGCATTGGGAGTGAGAAGAGACGCGATTGATCCAGGAGCGAGGAGTAGCTGTAGCTGTAATGGCTGCGGGGGTTGTGAAAACGGGTTTTACAGCAAGATCGTTGGGCTGAAAGGCCCCAAATGTGGGAAGGAAGTGGAGAGGCTTGACGGATGGATTAATTACTTCTTGAATGGTGGCGGTGAGGAGGAGAGGTTAGAGCCTCTTAGATTGGCGTACTTGCTGCTGGGTAAGGCTGCTTTTGCTTCTCACAACGCTGATGAATTTTTTGAAGGATTGGAATTCCCATCAACTGTAGAGGATTTCTTGCTCAATGATCCTCCCGGA

mRNA sequence

GTTGAAAAACGGCTTAAATTGGAGCATGGATCGCTACAAAACGAGGCTGTTCGAGAAGGCAATGCTTCATCAGCCGAAGACTCACTGAGCTCTCCCATGTTTCTTCATTTGCCCCAAACCAACGACACCTCCATGCTCCACGAAAGCAGCGAACCTCCGCTCGAGTTCCTCTCATCTTCCCCTGAATTTCCGCTATCCCCTCCAAAATCGGAATCCAATCATCCGAAGCCCGTCGATTTTGGCCAAAATCAGCCGCTAGATGACATCCAACGCCTGATTCAACTCCTAGGGCTTGGAGATTTATATGGCGAAAAAGCATTGGGAGTGAGAAGAGACGCGATTGATCCAGGAGCGAGGAGTAGCTGTAGCTGTAATGGCTGCGGGGGTTGTGAAAACGGGTTTTACAGCAAGATCGTTGGGCTGAAAGGCCCCAAATGTGGGAAGGAAGTGGAGAGGCTTGACGGATGGATTAATTACTTCTTGAATGGTGGCGGTGAGGAGGAGAGGTTAGAGCCTCTTAGATTGGCGTACTTGCTGCTGGGTAAGGCTGCTTTTGCTTCTCACAACGCTGATGAATTTTTTGAAGGATTGGAATTCCCATCAACTGTAGAGGATTTCTTGCTCAATGATCCTCCCGGA

Coding sequence (CDS)

GTTGAAAAACGGCTTAAATTGGAGCATGGATCGCTACAAAACGAGGCTGTTCGAGAAGGCAATGCTTCATCAGCCGAAGACTCACTGAGCTCTCCCATGTTTCTTCATTTGCCCCAAACCAACGACACCTCCATGCTCCACGAAAGCAGCGAACCTCCGCTCGAGTTCCTCTCATCTTCCCCTGAATTTCCGCTATCCCCTCCAAAATCGGAATCCAATCATCCGAAGCCCGTCGATTTTGGCCAAAATCAGCCGCTAGATGACATCCAACGCCTGATTCAACTCCTAGGGCTTGGAGATTTATATGGCGAAAAAGCATTGGGAGTGAGAAGAGACGCGATTGATCCAGGAGCGAGGAGTAGCTGTAGCTGTAATGGCTGCGGGGGTTGTGAAAACGGGTTTTACAGCAAGATCGTTGGGCTGAAAGGCCCCAAATGTGGGAAGGAAGTGGAGAGGCTTGACGGATGGATTAATTACTTCTTGAATGGTGGCGGTGAGGAGGAGAGGTTAGAGCCTCTTAGATTGGCGTACTTGCTGCTGGGTAAGGCTGCTTTTGCTTCTCACAACGCTGATGAATTTTTTGAAGGATTGGAATTCCCATCAACTGTAGAGGATTTCTTGCTCAATGATCCTCCCGGA

Protein sequence

VEKRLKLEHGSLQNEAVREGNASSAEDSLSSPMFLHLPQTNDTSMLHESSEPPLEFLSSSPEFPLSPPKSESNHPKPVDFGQNQPLDDIQRLIQLLGLGDLYGEKALGVRRDAIDPGARSSCSCNGCGGCENGFYSKIVGLKGPKCGKEVERLDGWINYFLNGGGEEERLEPLRLAYLLLGKAAFASHNADEFFEGLEFPSTVEDFLLNDPPG

Homology

[Close]

BLAST of MS013489.1 vs. NCBI nr
Match: XP_022139930.1 (uncharacterized protein LOC111010724 [Momordica charantia] >XP_022139931.1 uncharacterized protein LOC111010724 [Momordica charantia] >XP_022139932.1 uncharacterized protein LOC111010724 [Momordica charantia] >XP_022139933.1 uncharacterized protein LOC111010724 [Momordica charantia])

HSP 1 Score: 436.0 bits (1120), Expect = 1.8e-118
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   VEKRLKLEHGSLQNEAVREGNASSAEDSLSSPMFLHLPQTNDTSMLHESSEPPLEFLSSS 60
           VEKRLKLEHGSLQNEAVREGNASSAEDSLSSPMFLHLPQTNDTSMLHESSEPPLEFLSSS
Sbjct: 19  VEKRLKLEHGSLQNEAVREGNASSAEDSLSSPMFLHLPQTNDTSMLHESSEPPLEFLSSS 78

Query: 61  PEFPLSPPKSESNHPKPVDFGQNQPLDDIQRLIQLLGLGDLYGEKALGVRRDAIDPGARS 120
           PEFPLSPPKSESNHPKPVDFGQNQPLDDIQRLIQLLGLGDLYGEKALGVRRDAIDPGARS
Sbjct: 79  PEFPLSPPKSESNHPKPVDFGQNQPLDDIQRLIQLLGLGDLYGEKALGVRRDAIDPGARS 138

Query: 121 SCSCNGCGGCENGFYSKIVGLKGPKCGKEVERLDGWINYFLNGGGEEERLEPLRLAYLLL 180
           SCSCNGCGGCENGFYSKIVGLKGPKCGKEVERLDGWINYFLNGGGEEERLEPLRLAYLLL
Sbjct: 139 SCSCNGCGGCENGFYSKIVGLKGPKCGKEVERLDGWINYFLNGGGEEERLEPLRLAYLLL 198

Query: 181 GKAAFASHNADEFFEGLEFPSTVEDFLLNDPPG 214
           GKAAFASHNADEFFEGLEFPSTVEDFLLNDPPG
Sbjct: 199 GKAAFASHNADEFFEGLEFPSTVEDFLLNDPPG 231

[Close]

BLAST of MS013489.1 vs. NCBI nr
Match: XP_004147438.2 (uncharacterized protein LOC101217056 [Cucumis sativus] >XP_031743721.1 uncharacterized protein LOC101217056 [Cucumis sativus] >XP_031743726.1 uncharacterized protein LOC101217056 [Cucumis sativus])

HSP 1 Score: 268.5 bits (685), Expect = 5.0e-68
Identity = 142/219 (64.84%), Postives = 163/219 (74.43%), Query Frame = 0


Query: 1   VEKRLKLEHGSLQNE-------AVREGNASSAEDSLSSPMFLHLPQTNDTSMLHESSEPP 60
           VEKRLKL+H S ++         VR  ++S+ EDSLS+PM+LH PQTN +S L ESS+ P
Sbjct: 26  VEKRLKLDHSSQRDVLHPPPPLPVRTNSSSTEEDSLSTPMYLHFPQTNTSSTLQESSQAP 85

Query: 61  LEFLSSSPEFPLSPPKSESNHPKPVDFGQNQPLDDIQRLIQLLGLGDLYGEKALGVRRDA 120
           LEFLSSS + P S PKSESN PKP+D GQN+ +DDIQRLIQLLGL D   EK  G +   
Sbjct: 86  LEFLSSSSQSPPSHPKSESNPPKPIDRGQNRDVDDIQRLIQLLGLEDSCDEKEFGAKN-- 145

Query: 121 IDPGARSSCSCNGCGGCENGFYSKIVGLKGPKCGKEVERLDGWINYFLNGGGEEERLEPL 180
                     CNGC GCE+GFYSKIVGLKGPKC KEVERL+GWI +F NGG EE+RLEPL
Sbjct: 146 ---------GCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRLEPL 205

Query: 181 RLAYLLLGKAAFASHNADEFFEGLEFPSTVEDFLLNDPP 213
           RLAYLLLGKA FAS++ D   EGLEFPSTVEDFLLNDPP
Sbjct: 206 RLAYLLLGKAVFASNDDDGCLEGLEFPSTVEDFLLNDPP 233

[Close]

BLAST of MS013489.1 vs. NCBI nr
Match: KGN65550.1 (hypothetical protein Csa_019856 [Cucumis sativus])

HSP 1 Score: 268.5 bits (685), Expect = 5.0e-68
Identity = 142/219 (64.84%), Postives = 163/219 (74.43%), Query Frame = 0


Query: 1   VEKRLKLEHGSLQNE-------AVREGNASSAEDSLSSPMFLHLPQTNDTSMLHESSEPP 60
           VEKRLKL+H S ++         VR  ++S+ EDSLS+PM+LH PQTN +S L ESS+ P
Sbjct: 22  VEKRLKLDHSSQRDVLHPPPPLPVRTNSSSTEEDSLSTPMYLHFPQTNTSSTLQESSQAP 81

Query: 61  LEFLSSSPEFPLSPPKSESNHPKPVDFGQNQPLDDIQRLIQLLGLGDLYGEKALGVRRDA 120
           LEFLSSS + P S PKSESN PKP+D GQN+ +DDIQRLIQLLGL D   EK  G +   
Sbjct: 82  LEFLSSSSQSPPSHPKSESNPPKPIDRGQNRDVDDIQRLIQLLGLEDSCDEKEFGAKN-- 141

Query: 121 IDPGARSSCSCNGCGGCENGFYSKIVGLKGPKCGKEVERLDGWINYFLNGGGEEERLEPL 180
                     CNGC GCE+GFYSKIVGLKGPKC KEVERL+GWI +F NGG EE+RLEPL
Sbjct: 142 ---------GCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRLEPL 201

Query: 181 RLAYLLLGKAAFASHNADEFFEGLEFPSTVEDFLLNDPP 213
           RLAYLLLGKA FAS++ D   EGLEFPSTVEDFLLNDPP
Sbjct: 202 RLAYLLLGKAVFASNDDDGCLEGLEFPSTVEDFLLNDPP 229

[Close]

BLAST of MS013489.1 vs. NCBI nr
Match: KAG6583907.1 (hypothetical protein SDJN03_19839, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 266.2 bits (679), Expect = 2.5e-67
Identity = 143/225 (63.56%), Postives = 164/225 (72.89%), Query Frame = 0


Query: 1   VEKRLKLEHGSLQNEAVRE-------------GNASSAEDSLSSPMFLHLPQTNDTSMLH 60
           VEKRLKL+H S Q +A+R              G++SS E+SLS+PM+LHLPQTN TS L 
Sbjct: 27  VEKRLKLDHPS-QRDALRPPSPRRASSLPVEIGSSSSFEESLSTPMYLHLPQTNTTSSLQ 86

Query: 61  ESSEPPLEFLSSSPEFPLSPPKSESNHPKPVDFGQNQPLDDIQRLIQLLGLGDLYGEKAL 120
           ESSEPP EFLS+S +      KSESN P  +D G N+P+DDIQRL+QLLGLGD + E+ L
Sbjct: 87  ESSEPPPEFLSNSSDL-----KSESNSPNLIDCGHNRPVDDIQRLVQLLGLGDSFEEQEL 146

Query: 121 GVRRDAIDPGARSSCSCNGCGGCENGFYSKIVGLKGPKCGKEVERLDGWINYFLNGGGEE 180
           G R             CNGC GCE+GFYSKIVGLKGPKCGKEVERL+GWI Y  NGGGE 
Sbjct: 147 GAR-----------SGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIQYLWNGGGEA 206

Query: 181 ERLEPLRLAYLLLGKAAFASHNADEFFEGLEFPSTVEDFLLNDPP 213
           ERLEPLRLAYLL+GKA FAS+ +D   EGLEFPSTVEDFLLNDPP
Sbjct: 207 ERLEPLRLAYLLMGKAVFASNGSDHCLEGLEFPSTVEDFLLNDPP 234

[Close]

BLAST of MS013489.1 vs. NCBI nr
Match: XP_022927255.1 (uncharacterized protein LOC111434155 [Cucurbita moschata] >XP_022927256.1 uncharacterized protein LOC111434155 [Cucurbita moschata])

HSP 1 Score: 264.2 bits (674), Expect = 9.5e-67
Identity = 142/225 (63.11%), Postives = 165/225 (73.33%), Query Frame = 0


Query: 1   VEKRLKLEHGSLQNEAVRE-------------GNASSAEDSLSSPMFLHLPQTNDTSMLH 60
           VEKRLKL++ S Q +A+R               ++SS E+SLS+PM+LHLPQTN TS L 
Sbjct: 29  VEKRLKLDNPS-QRDALRPPSPRRAPSLPVEISSSSSVEESLSTPMYLHLPQTNTTSSLQ 88

Query: 61  ESSEPPLEFLSSSPEFPLSPPKSESNHPKPVDFGQNQPLDDIQRLIQLLGLGDLYGEKAL 120
           ESSEPP EFLS+S +      KSESN P  +D GQN+P+DDIQRL+QLLGLGD + E+ L
Sbjct: 89  ESSEPPPEFLSNSSDL-----KSESNSPNLIDCGQNRPVDDIQRLVQLLGLGDSFEEQEL 148

Query: 121 GVRRDAIDPGARSSCSCNGCGGCENGFYSKIVGLKGPKCGKEVERLDGWINYFLNGGGEE 180
           G R             CNGC GCE+GFYSKIVGLKGPKCGKEVERL+GWI+YF  GGGE 
Sbjct: 149 GAR-----------SGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIHYFWTGGGEA 208

Query: 181 ERLEPLRLAYLLLGKAAFASHNADEFFEGLEFPSTVEDFLLNDPP 213
           ERLEPLRLAYLL+GKA FAS+ +D   EGLEFPSTVEDFLLNDPP
Sbjct: 209 ERLEPLRLAYLLMGKAVFASNGSDHCLEGLEFPSTVEDFLLNDPP 236

[Close]

BLAST of MS013489.1 vs. ExPASy TrEMBL
Match: A0A6J1CGU3 (uncharacterized protein LOC111010724 OS=Momordica charantia OX=3673 GN=LOC111010724 PE=4 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 8.8e-119
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   VEKRLKLEHGSLQNEAVREGNASSAEDSLSSPMFLHLPQTNDTSMLHESSEPPLEFLSSS 60
           VEKRLKLEHGSLQNEAVREGNASSAEDSLSSPMFLHLPQTNDTSMLHESSEPPLEFLSSS
Sbjct: 19  VEKRLKLEHGSLQNEAVREGNASSAEDSLSSPMFLHLPQTNDTSMLHESSEPPLEFLSSS 78

Query: 61  PEFPLSPPKSESNHPKPVDFGQNQPLDDIQRLIQLLGLGDLYGEKALGVRRDAIDPGARS 120
           PEFPLSPPKSESNHPKPVDFGQNQPLDDIQRLIQLLGLGDLYGEKALGVRRDAIDPGARS
Sbjct: 79  PEFPLSPPKSESNHPKPVDFGQNQPLDDIQRLIQLLGLGDLYGEKALGVRRDAIDPGARS 138

Query: 121 SCSCNGCGGCENGFYSKIVGLKGPKCGKEVERLDGWINYFLNGGGEEERLEPLRLAYLLL 180
           SCSCNGCGGCENGFYSKIVGLKGPKCGKEVERLDGWINYFLNGGGEEERLEPLRLAYLLL
Sbjct: 139 SCSCNGCGGCENGFYSKIVGLKGPKCGKEVERLDGWINYFLNGGGEEERLEPLRLAYLLL 198

Query: 181 GKAAFASHNADEFFEGLEFPSTVEDFLLNDPPG 214
           GKAAFASHNADEFFEGLEFPSTVEDFLLNDPPG
Sbjct: 199 GKAAFASHNADEFFEGLEFPSTVEDFLLNDPPG 231

[Close]

BLAST of MS013489.1 vs. ExPASy TrEMBL
Match: A0A0A0LUG6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G445870 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 2.4e-68
Identity = 142/219 (64.84%), Postives = 163/219 (74.43%), Query Frame = 0


Query: 1   VEKRLKLEHGSLQNE-------AVREGNASSAEDSLSSPMFLHLPQTNDTSMLHESSEPP 60
           VEKRLKL+H S ++         VR  ++S+ EDSLS+PM+LH PQTN +S L ESS+ P
Sbjct: 22  VEKRLKLDHSSQRDVLHPPPPLPVRTNSSSTEEDSLSTPMYLHFPQTNTSSTLQESSQAP 81

Query: 61  LEFLSSSPEFPLSPPKSESNHPKPVDFGQNQPLDDIQRLIQLLGLGDLYGEKALGVRRDA 120
           LEFLSSS + P S PKSESN PKP+D GQN+ +DDIQRLIQLLGL D   EK  G +   
Sbjct: 82  LEFLSSSSQSPPSHPKSESNPPKPIDRGQNRDVDDIQRLIQLLGLEDSCDEKEFGAKN-- 141

Query: 121 IDPGARSSCSCNGCGGCENGFYSKIVGLKGPKCGKEVERLDGWINYFLNGGGEEERLEPL 180
                     CNGC GCE+GFYSKIVGLKGPKC KEVERL+GWI +F NGG EE+RLEPL
Sbjct: 142 ---------GCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRLEPL 201

Query: 181 RLAYLLLGKAAFASHNADEFFEGLEFPSTVEDFLLNDPP 213
           RLAYLLLGKA FAS++ D   EGLEFPSTVEDFLLNDPP
Sbjct: 202 RLAYLLLGKAVFASNDDDGCLEGLEFPSTVEDFLLNDPP 229

[Close]

BLAST of MS013489.1 vs. ExPASy TrEMBL
Match: A0A6J1END4 (uncharacterized protein LOC111434155 OS=Cucurbita moschata OX=3662 GN=LOC111434155 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 4.6e-67
Identity = 142/225 (63.11%), Postives = 165/225 (73.33%), Query Frame = 0


Query: 1   VEKRLKLEHGSLQNEAVRE-------------GNASSAEDSLSSPMFLHLPQTNDTSMLH 60
           VEKRLKL++ S Q +A+R               ++SS E+SLS+PM+LHLPQTN TS L 
Sbjct: 29  VEKRLKLDNPS-QRDALRPPSPRRAPSLPVEISSSSSVEESLSTPMYLHLPQTNTTSSLQ 88

Query: 61  ESSEPPLEFLSSSPEFPLSPPKSESNHPKPVDFGQNQPLDDIQRLIQLLGLGDLYGEKAL 120
           ESSEPP EFLS+S +      KSESN P  +D GQN+P+DDIQRL+QLLGLGD + E+ L
Sbjct: 89  ESSEPPPEFLSNSSDL-----KSESNSPNLIDCGQNRPVDDIQRLVQLLGLGDSFEEQEL 148

Query: 121 GVRRDAIDPGARSSCSCNGCGGCENGFYSKIVGLKGPKCGKEVERLDGWINYFLNGGGEE 180
           G R             CNGC GCE+GFYSKIVGLKGPKCGKEVERL+GWI+YF  GGGE 
Sbjct: 149 GAR-----------SGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIHYFWTGGGEA 208

Query: 181 ERLEPLRLAYLLLGKAAFASHNADEFFEGLEFPSTVEDFLLNDPP 213
           ERLEPLRLAYLL+GKA FAS+ +D   EGLEFPSTVEDFLLNDPP
Sbjct: 209 ERLEPLRLAYLLMGKAVFASNGSDHCLEGLEFPSTVEDFLLNDPP 236

[Close]

BLAST of MS013489.1 vs. ExPASy TrEMBL
Match: A0A6J1KGL6 (uncharacterized protein LOC111495590 OS=Cucurbita maxima OX=3661 GN=LOC111495590 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 2.5e-65
Identity = 140/225 (62.22%), Postives = 160/225 (71.11%), Query Frame = 0


Query: 1   VEKRLKLEHGSLQNEAVRE-------------GNASSAEDSLSSPMFLHLPQTNDTSMLH 60
           VEKRLKL++ S Q +A+R               ++SS E+SLS+PM+LHL QTN  S L 
Sbjct: 31  VEKRLKLDNPS-QRDALRPPSPRRAPSLPVEISSSSSVEESLSTPMYLHLSQTNTASSLQ 90

Query: 61  ESSEPPLEFLSSSPEFPLSPPKSESNHPKPVDFGQNQPLDDIQRLIQLLGLGDLYGEKAL 120
           ESSEPP EFLS+S +      KSESN P  +D GQN+P+DDIQRL+QLLG GD + EK L
Sbjct: 91  ESSEPPPEFLSNSSDL-----KSESNSPNLIDCGQNRPVDDIQRLVQLLGFGDSFEEKEL 150

Query: 121 GVRRDAIDPGARSSCSCNGCGGCENGFYSKIVGLKGPKCGKEVERLDGWINYFLNGGGEE 180
           G R             CNGC GCE+GFYSKIVGLKGPKCGKEVERL+GWI YF  GGGE 
Sbjct: 151 GAR-----------SGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIQYFWTGGGEA 210

Query: 181 ERLEPLRLAYLLLGKAAFASHNADEFFEGLEFPSTVEDFLLNDPP 213
           ERLEPLRLAYLL+GKA FAS+  D   EGLEFPSTVEDFLLNDPP
Sbjct: 211 ERLEPLRLAYLLMGKAVFASNGGDNCLEGLEFPSTVEDFLLNDPP 238

[Close]

BLAST of MS013489.1 vs. ExPASy TrEMBL
Match: A0A5A7UHE6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00360 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 1.3e-64
Identity = 141/221 (63.80%), Postives = 160/221 (72.40%), Query Frame = 0


Query: 1   VEKRLKLEHGSLQNEAVR-------EGNASSA--EDSLSSPMFLHLPQTNDTSMLHESSE 60
           VEKRLKL+H S Q + +        + NASS+  ED LS+PM+LH PQTN +S L ESS+
Sbjct: 28  VEKRLKLDHSS-QRDVLHPPPPVPVQTNASSSTEEDLLSTPMYLHFPQTNTSSTLQESSQ 87

Query: 61  PPLEFLSSSPEFPLSPPKSESNHPKPVDFGQNQPLDDIQRLIQLLGLGDLYGEKALGVRR 120
           PPLEFLS+    P S PKS SN P  +D GQN+ LDDIQRLIQLLGL D   EK LG + 
Sbjct: 88  PPLEFLSNYSHSPPSHPKSVSNPPNLIDRGQNRDLDDIQRLIQLLGLEDSCDEKELGTK- 147

Query: 121 DAIDPGARSSCSCNGCGGCENGFYSKIVGLKGPKCGKEVERLDGWINYFLNGGGEEERLE 180
                       CNGC GCE+GFYSKIVGLKGPKC KEVERL+GWI +F NGGGEE+RLE
Sbjct: 148 ----------IGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGGEEDRLE 207

Query: 181 PLRLAYLLLGKAAFASHNADEFFEGLEFPSTVEDFLLNDPP 213
           PLRLAYLLLGKA FAS+  D   +GLEFPSTVEDFLLNDPP
Sbjct: 208 PLRLAYLLLGKAVFASNGDDGCLDGLEFPSTVEDFLLNDPP 236

The following BLAST results are available for this feature:

BLAST of MS013489.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139930.1	1.8e-118	100.00	uncharacterized protein LOC111010724 [Momordica charantia] >XP_022139931.1 uncha...	[more]
XP_004147438.2	5.0e-68	64.84	uncharacterized protein LOC101217056 [Cucumis sativus] >XP_031743721.1 uncharact...	[more]
KGN65550.1	5.0e-68	64.84	hypothetical protein Csa_019856 [Cucumis sativus]	[more]
KAG6583907.1	2.5e-67	63.56	hypothetical protein SDJN03_19839, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022927255.1	9.5e-67	63.11	uncharacterized protein LOC111434155 [Cucurbita moschata] >XP_022927256.1 unchar...	[more]

BLAST of MS013489.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS013489.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CGU3	8.8e-119	100.00	uncharacterized protein LOC111010724 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A0A0LUG6	2.4e-68	64.84	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G445870 PE=4 SV=1	[more]
A0A6J1END4	4.6e-67	63.11	uncharacterized protein LOC111434155 OS=Cucurbita moschata OX=3662 GN=LOC1114341...	[more]
A0A6J1KGL6	2.5e-65	62.22	uncharacterized protein LOC111495590 OS=Cucurbita maxima OX=3661 GN=LOC111495590...	[more]
A0A5A7UHE6	1.3e-64	63.80	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MS013489.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..56

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS013489	MS013489	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS013489.1-cds	MS013489.1-cds-scaffold402:1921660..1922298	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS013489.1	MS013489.1-protein	polypeptide