MS010560.1 (mRNA) Bitter gourd (TR) v1

Overview
NameMS010560.1
TypemRNA
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Locationscaffold35: 569458 .. 569628 (-)
Sequence length171
RNA-Seq ExpressionMS010560.1
SyntenyMS010560.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATTAGCATCGGCAAAAGGTAGTAAGCCTGCTAAAGAACCCCTCCCAGCCATGCGAAAGCGTCCCGAATTGTACACCACTATCAGATCAACGCCCCCAGCTTCTTCAAACTTGGCAGATATGCCAGTCCCCGCACCAGCCCCTATTATGGGCACTCCTTCAACTATT

mRNA sequence

ATGGCATTAGCATCGGCAAAAGGTAGTAAGCCTGCTAAAGAACCCCTCCCAGCCATGCGAAAGCGTCCCGAATTGTACACCACTATCAGATCAACGCCCCCAGCTTCTTCAAACTTGGCAGATATGCCAGTCCCCGCACCAGCCCCTATTATGGGCACTCCTTCAACTATT

Coding sequence (CDS)

ATGGCATTAGCATCGGCAAAAGGTAGTAAGCCTGCTAAAGAACCCCTCCCAGCCATGCGAAAGCGTCCCGAATTGTACACCACTATCAGATCAACGCCCCCAGCTTCTTCAAACTTGGCAGATATGCCAGTCCCCGCACCAGCCCCTATTATGGGCACTCCTTCAACTATT

Protein sequence

MALASAKGSKPAKEPLPAMRKRPELYTTIRSTPPASSNLADMPVPAPAPIMGTPSTI
Homology
The following BLAST results are available for this feature:
BLAST of MS010560.1 vs.
Match NameE-valueIdentityDescription
BLAST of MS010560.1 vs.
Match NameE-valueIdentityDescription
BLAST of MS010560.1 vs.
Match NameE-valueIdentityDescription
BLAST of MS010560.1 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..57

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MS010560MS010560gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MS010560.1-cdsMS010560.1-cds-scaffold35:569458..569628CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MS010560.1MS010560.1-proteinpolypeptide