MS010405.1 (mRNA) Bitter gourd (TR) v1

Overview
NameMS010405.1
TypemRNA
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description60S ribosomal protein L14-2-like
Locationscaffold878: 681807 .. 683139 (-)
Sequence length396
RNA-Seq ExpressionMS010405.1
SyntenyMS010405.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCGTTCAAAAGGTACGTTGAGATCGGCAGGGTCGCTCTCGTCAACTATGGCGAAGACTACGGAAAGCTTGTCGTCATTGTGGATGTTATTGACCAGAACAGAGTATGTTTTTTTTGATCCATCTTGTTATTTTTAACGACGACGACGACTAGTTTTCAGTTTTACGTCGTTCCAATCCTCTTGGTCATCTGAAAGCCACGGAAAATGGAGCTCTCTGCTTCCTCAATCCTAGTTTTCAGGGACTCGTTTATACTGAATTTGATGTTTGAGTCATGATATAAAGCTTCGCGTTCATGGAGTAGCTCATGCTCGTTCATGGAGGATGCAAGTTGTACTTGATAAATTGTTAGCTTCAACTATTTTTCTTTGACTGATCCTCCCCGGCCAAAAGGAATGTTCGGGGGATAGTTCAGATTTGTGGTTGTGGTCTTGTGAGATCACATGATTTTAACTGTATCTAGTACTTTCCATGAATTTCCAAATGCTGATATATATATAAATGTCACACCGGATATTTGTGAGACGTTGATTCTTGCAGTCTCATGGAACTATGCTTTTCTTTTTTACCCAATCGAATGCGATTCTACAGNAAAGTTTGTTGTTAATTTTGTGTGTGTATATATATATATATATATTTGTTTTCATATGCTAGCGTCTTAGTTTTAGTTTCTTTGGGACCTGATTAGTTGCTCATTTTATTTTTTTAATGCTACCATATACAGGCTTTGGTGGATGCTCCTGATATGGTCAGATCTCAAATGAACTTTAAGAGACTTTCTCTTACTGACATTAAAATTGACATTAAGAGGGTCCCCAGGAAGAAGGAACTCATTGAAGCTATGAAGGCTGCTGGTACGCTTTTTAACTTAATTTTCACTTTCAAATACCTATCCCCGCTCCCACCCTCTGCTGTTCTATTTTTTGCTTGAACCTGTTGTTTTACCGTCAGATGTTCAGAAAAAGTGGGAGGATAGCTCTTGGGGGAGAAAACTACTCGTTAAGAAAAGAAGGGCAGCACTTAATGATTTTGATAGGTTCAAGCTAATGTTGGCTAAGATAAAGGTCAGTGATACAATATGTACTTTCTCTCGTTACTCATATGTTTTTGACCTTTTTCTTATGCATCCATGCGGATAAGACTTAAGAGTTCCCAAAGAAGGTTCATTTTACTTTACAATTTATAAGAAACGTTCTATTGTTTCTTTTGCATGCTTGATACTTAACAACTAACTGCTTATGGACCGAGTTTTTATTTATTTATATTTTTTTAAAATTTTGGCAGAAAGCTGGATTGGTGAGGCAAGAGCTTGCGAAGCTTAAAAAGAGTGAATCT

mRNA sequence

CCGTTCAAAAGGTACGTTGAGATCGGCAGGGTCGCTCTCGTCAACTATGGCGAAGACTACGGAAAGCTTGTCGTCATTGTGGATGTTATTGACCAGAACAGAGCTTTGGTGGATGCTCCTGATATGGTCAGATCTCAAATGAACTTTAAGAGACTTTCTCTTACTGACATTAAAATTGACATTAAGAGGGTCCCCAGGAAGAAGGAACTCATTGAAGCTATGAAGGCTGCTGATGTTCAGAAAAAGTGGGAGGATAGCTCTTGGGGGAGAAAACTACTCGTTAAGAAAAGAAGGGCAGCACTTAATGATTTTGATAGGTTCAAGCTAATGTTGGCTAAGATAAAGAAAGCTGGATTGGTGAGGCAAGAGCTTGCGAAGCTTAAAAAGAGTGAATCT

Coding sequence (CDS)

CCGTTCAAAAGGTACGTTGAGATCGGCAGGGTCGCTCTCGTCAACTATGGCGAAGACTACGGAAAGCTTGTCGTCATTGTGGATGTTATTGACCAGAACAGAGCTTTGGTGGATGCTCCTGATATGGTCAGATCTCAAATGAACTTTAAGAGACTTTCTCTTACTGACATTAAAATTGACATTAAGAGGGTCCCCAGGAAGAAGGAACTCATTGAAGCTATGAAGGCTGCTGATGTTCAGAAAAAGTGGGAGGATAGCTCTTGGGGGAGAAAACTACTCGTTAAGAAAAGAAGGGCAGCACTTAATGATTTTGATAGGTTCAAGCTAATGTTGGCTAAGATAAAGAAAGCTGGATTGGTGAGGCAAGAGCTTGCGAAGCTTAAAAAGAGTGAATCT

Protein sequence

PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKKAGLVRQELAKLKKSES
Homology
[Close]
BLAST of MS010405.1 vs. NCBI nr
Match: XP_022153191.1 (60S ribosomal protein L14-2-like [Momordica charantia])

HSP 1 Score: 248.8 bits (634), Expect = 2.6e-62
Identity = 131/132 (99.24%), Postives = 131/132 (99.24%), Query Frame = 0 

Query: 1   PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKID 60
           PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTD KID
Sbjct: 2   PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDFKID 61

Query: 61  IKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKKAGLV 120
           IKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKKAGLV
Sbjct: 62  IKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKKAGLV 121

Query: 121 RQELAKLKKSES 133
           RQELAKLKKSES
Sbjct: 122 RQELAKLKKSES 133

[Close]
BLAST of MS010405.1 vs. NCBI nr
Match: XP_022947422.1 (60S ribosomal protein L14-2-like [Cucurbita moschata] >XP_022974503.1 60S ribosomal protein L14-2-like [Cucurbita maxima] >XP_023521269.1 60S ribosomal protein L14-2-like [Cucurbita pepo subsp. pepo] >XP_023521270.1 60S ribosomal protein L14-2-like [Cucurbita pepo subsp. pepo] >XP_023539135.1 60S ribosomal protein L14-2-like [Cucurbita pepo subsp. pepo] >KAG6597356.1 60S ribosomal protein L14-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028820.1 60S ribosomal protein L14-2 [Cucurbita argyrosperma subsp. argyrosperma] >KAG6597357.1 60S ribosomal protein L14-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028821.1 60S ribosomal protein L14-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 248.1 bits (632), Expect = 4.4e-62
Identity = 130/132 (98.48%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKID 60
           PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKID
Sbjct: 2   PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKID 61

Query: 61  IKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKKAGLV 120
           IKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA+LNDFDRFKLMLAKIK+AGLV
Sbjct: 62  IKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGLV 121

Query: 121 RQELAKLKKSES 133
           RQELAKLKKSES
Sbjct: 122 RQELAKLKKSES 133

[Close]
BLAST of MS010405.1 vs. NCBI nr
Match: XP_038881110.1 (60S ribosomal protein L14-2-like [Benincasa hispida])

HSP 1 Score: 246.9 bits (629), Expect = 9.7e-62
Identity = 129/132 (97.73%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKID 60
           PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKID
Sbjct: 2   PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKID 61

Query: 61  IKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKKAGLV 120
           IKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLV+KRRA+LNDFDRFKLMLAKIK+AGLV
Sbjct: 62  IKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVRKRRASLNDFDRFKLMLAKIKRAGLV 121

Query: 121 RQELAKLKKSES 133
           RQELAKLKKSES
Sbjct: 122 RQELAKLKKSES 133

[Close]
BLAST of MS010405.1 vs. NCBI nr
Match: KAG7018796.1 (60S ribosomal protein L14-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 246.9 bits (629), Expect = 9.7e-62
Identity = 129/132 (97.73%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKID 60
           PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKID
Sbjct: 117 PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKID 176

Query: 61  IKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKKAGLV 120
           IKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA+LNDFDRFKLMLAKIK+AGLV
Sbjct: 177 IKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGLV 236

Query: 121 RQELAKLKKSES 133
           RQELAKL+KSES
Sbjct: 237 RQELAKLRKSES 248

[Close]
BLAST of MS010405.1 vs. NCBI nr
Match: XP_022924785.1 (60S ribosomal protein L14-2-like [Cucurbita moschata] >XP_022979350.1 60S ribosomal protein L14-2-like [Cucurbita maxima] >XP_023527238.1 60S ribosomal protein L14-2-like [Cucurbita pepo subsp. pepo] >KAG6582391.1 60S ribosomal protein L14-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 246.9 bits (629), Expect = 9.7e-62
Identity = 129/132 (97.73%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKID 60
           PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKID
Sbjct: 2   PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKID 61

Query: 61  IKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKKAGLV 120
           IKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA+LNDFDRFKLMLAKIK+AGLV
Sbjct: 62  IKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGLV 121

Query: 121 RQELAKLKKSES 133
           RQELAKL+KSES
Sbjct: 122 RQELAKLRKSES 133

[Close]
BLAST of MS010405.1 vs. ExPASy Swiss-Prot
Match: Q9T043 (60S ribosomal protein L14-2 OS=Arabidopsis thaliana OX=3702 GN=RPL14B PE=1 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 7.8e-54
Identity = 110/128 (85.94%), Postives = 119/128 (92.97%), Query Frame = 0 

Query: 2   FKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDI 61
           FKRYVEIGRVALVNYGED+GKLVVIVDV+DQNRALVDAPDM R QMNFKRLSLTDI IDI
Sbjct: 3   FKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVIDI 62

Query: 62  KRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKKAGLVR 121
            RVP+KK LIEAM+ ADV+ KWE SSWGRKL+V+KRRA LNDFDRFK+MLAKIKKAG+VR
Sbjct: 63  NRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGVVR 122

Query: 122 QELAKLKK 130
           QELAKLKK
Sbjct: 123 QELAKLKK 130

[Close]
BLAST of MS010405.1 vs. ExPASy Swiss-Prot
Match: Q9SIM4 (60S ribosomal protein L14-1 OS=Arabidopsis thaliana OX=3702 GN=RPL14A PE=2 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 2.9e-53
Identity = 108/128 (84.38%), Postives = 119/128 (92.97%), Query Frame = 0 

Query: 2   FKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDI 61
           FKR+VEIGRVALVNYGEDYGKLVVIVDV+DQNRALVDAPDM R QMN KRLSLTDI IDI
Sbjct: 3   FKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDIVIDI 62

Query: 62  KRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKKAGLVR 121
            RVP+KK LIEAM+ ADV+ KWE SSWGRKL+V+KRRAALNDFDRFK+MLAKIK+AG+VR
Sbjct: 63  NRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRAGIVR 122

Query: 122 QELAKLKK 130
           QELAKLK+
Sbjct: 123 QELAKLKR 130

[Close]
BLAST of MS010405.1 vs. ExPASy Swiss-Prot
Match: P55844 (Probable 60S ribosomal protein L14 OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 1.9e-52
Identity = 105/130 (80.77%), Postives = 121/130 (93.08%), Query Frame = 0 

Query: 1   PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKID 60
           PFKR+VEIGRVAL+NYG+DYG+LVVIVDVIDQ RALVDAPDM RS +NFKRLSLTD+KID
Sbjct: 2   PFKRFVEIGRVALINYGKDYGRLVVIVDVIDQTRALVDAPDMERSPINFKRLSLTDLKID 61

Query: 61  IKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKKAGLV 120
           IKRVP+KK+LI+A++AADV+ KW  SSWGRKL+VKK RAALNDFDRFK+MLAKIK+A  V
Sbjct: 62  IKRVPKKKDLIKALEAADVKNKWAKSSWGRKLIVKKTRAALNDFDRFKIMLAKIKRAAGV 121

Query: 121 RQELAKLKKS 131
           RQELAKLKK+
Sbjct: 122 RQELAKLKKT 131

[Close]
BLAST of MS010405.1 vs. ExPASy Swiss-Prot
Match: Q7XYA7 (60S ribosomal protein L14 OS=Griffithsia japonica OX=83288 GN=RPL14 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 4.4e-25
Identity = 67/130 (51.54%), Postives = 91/130 (70.00%), Query Frame = 0 

Query: 2   FKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPD--MVRSQMNFKRLSLTDIKI 61
           F R+VE GRVALV+YGE   KLVVIVD++DQNR LVD+P   + R  +N KR++LT IK+
Sbjct: 3   FTRFVEAGRVALVSYGEHLNKLVVIVDILDQNRILVDSPSHGLKRKVINVKRIALTSIKV 62

Query: 62  -DIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKKAG 121
            DI R     E+     AA V + +  S WG+KL  +++RAAL+DF RFK+M+A++KK+ 
Sbjct: 63  DDIARGAPVAEVKSKYTAAKVDETFAASGWGKKLAKREKRAALDDFGRFKVMVARMKKSK 122

Query: 122 LVRQELAKLK 129
            +  ELAKLK
Sbjct: 123 AINAELAKLK 132

[Close]
BLAST of MS010405.1 vs. ExPASy Swiss-Prot
Match: O46160 (60S ribosomal protein L14 OS=Lumbricus rubellus OX=35632 GN=RPL14 PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 2.9e-24
Identity = 63/131 (48.09%), Postives = 85/131 (64.89%), Query Frame = 0 

Query: 2   FKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAP--DMVRSQMNFKRLSLTDIKI 61
           F+R+VEIGRVA   YG D GKLV IVDVIDQNRALVD P   + R  MNFK L LT++K 
Sbjct: 3   FRRFVEIGRVARAVYGPDQGKLVAIVDVIDQNRALVDGPCTHVARKSMNFKELELTNLKA 62

Query: 62  DIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKKAGL 121
                 +   + +A +  ++ KKWE+S   +K+  K++R  L DF+RFKLM AK  +  L
Sbjct: 63  KFPHSAKTGVVKKAWEKDEISKKWEESHLAKKIAAKEKRKTLTDFERFKLMKAKQARNRL 122

Query: 122 VRQELAKLKKS 131
           ++ E  KL+K+
Sbjct: 123 IKIEFGKLRKA 133

[Close]
BLAST of MS010405.1 vs. ExPASy TrEMBL
Match: A0A6J1DJX2 (60S ribosomal protein L14-2-like OS=Momordica charantia OX=3673 GN=LOC111020745 PE=3 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.2e-62
Identity = 131/132 (99.24%), Postives = 131/132 (99.24%), Query Frame = 0 

Query: 1   PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKID 60
           PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTD KID
Sbjct: 2   PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDFKID 61

Query: 61  IKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKKAGLV 120
           IKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKKAGLV
Sbjct: 62  IKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKKAGLV 121

Query: 121 RQELAKLKKSES 133
           RQELAKLKKSES
Sbjct: 122 RQELAKLKKSES 133

[Close]
BLAST of MS010405.1 vs. ExPASy TrEMBL
Match: A0A6J1IGF2 (60S ribosomal protein L14-2-like OS=Cucurbita maxima OX=3661 GN=LOC111473179 PE=3 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.1e-62
Identity = 130/132 (98.48%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKID 60
           PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKID
Sbjct: 2   PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKID 61

Query: 61  IKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKKAGLV 120
           IKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA+LNDFDRFKLMLAKIK+AGLV
Sbjct: 62  IKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGLV 121

Query: 121 RQELAKLKKSES 133
           RQELAKLKKSES
Sbjct: 122 RQELAKLKKSES 133

[Close]
BLAST of MS010405.1 vs. ExPASy TrEMBL
Match: A0A6J1G6E8 (60S ribosomal protein L14-2-like OS=Cucurbita moschata OX=3662 GN=LOC111451284 PE=3 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.1e-62
Identity = 130/132 (98.48%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKID 60
           PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKID
Sbjct: 2   PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKID 61

Query: 61  IKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKKAGLV 120
           IKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA+LNDFDRFKLMLAKIK+AGLV
Sbjct: 62  IKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGLV 121

Query: 121 RQELAKLKKSES 133
           RQELAKLKKSES
Sbjct: 122 RQELAKLKKSES 133

[Close]
BLAST of MS010405.1 vs. ExPASy TrEMBL
Match: A0A6J1IT01 (60S ribosomal protein L14-2-like OS=Cucurbita maxima OX=3661 GN=LOC111479102 PE=3 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 4.7e-62
Identity = 129/132 (97.73%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKID 60
           PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKID
Sbjct: 2   PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKID 61

Query: 61  IKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKKAGLV 120
           IKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA+LNDFDRFKLMLAKIK+AGLV
Sbjct: 62  IKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGLV 121

Query: 121 RQELAKLKKSES 133
           RQELAKL+KSES
Sbjct: 122 RQELAKLRKSES 133

[Close]
BLAST of MS010405.1 vs. ExPASy TrEMBL
Match: A0A6J1EG14 (60S ribosomal protein L14-2-like OS=Cucurbita moschata OX=3662 GN=LOC111432177 PE=3 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 4.7e-62
Identity = 129/132 (97.73%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKID 60
           PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKID
Sbjct: 2   PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKID 61

Query: 61  IKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKKAGLV 120
           IKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA+LNDFDRFKLMLAKIK+AGLV
Sbjct: 62  IKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGLV 121

Query: 121 RQELAKLKKSES 133
           RQELAKL+KSES
Sbjct: 122 RQELAKLRKSES 133

[Close]
BLAST of MS010405.1 vs. TAIR 10
Match: AT4G27090.1 (Ribosomal protein L14 )

HSP 1 Score: 211.1 bits (536), Expect = 5.5e-55
Identity = 110/128 (85.94%), Postives = 119/128 (92.97%), Query Frame = 0 

Query: 2   FKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDI 61
           FKRYVEIGRVALVNYGED+GKLVVIVDV+DQNRALVDAPDM R QMNFKRLSLTDI IDI
Sbjct: 3   FKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVIDI 62

Query: 62  KRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKKAGLVR 121
            RVP+KK LIEAM+ ADV+ KWE SSWGRKL+V+KRRA LNDFDRFK+MLAKIKKAG+VR
Sbjct: 63  NRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGVVR 122

Query: 122 QELAKLKK 130
           QELAKLKK
Sbjct: 123 QELAKLKK 130

[Close]
BLAST of MS010405.1 vs. TAIR 10
Match: AT2G20450.1 (Ribosomal protein L14 )

HSP 1 Score: 209.1 bits (531), Expect = 2.1e-54
Identity = 108/128 (84.38%), Postives = 119/128 (92.97%), Query Frame = 0 

Query: 2   FKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDI 61
           FKR+VEIGRVALVNYGEDYGKLVVIVDV+DQNRALVDAPDM R QMN KRLSLTDI IDI
Sbjct: 3   FKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDIVIDI 62

Query: 62  KRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKKAGLVR 121
            RVP+KK LIEAM+ ADV+ KWE SSWGRKL+V+KRRAALNDFDRFK+MLAKIK+AG+VR
Sbjct: 63  NRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRAGIVR 122

Query: 122 QELAKLKK 130
           QELAKLK+
Sbjct: 123 QELAKLKR 130

The following BLAST results are available for this feature:
BLAST of MS010405.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022153191.12.6e-6299.2460S ribosomal protein L14-2-like [Momordica charantia][more]
XP_022947422.14.4e-6298.4860S ribosomal protein L14-2-like [Cucurbita moschata] >XP_022974503.1 60S riboso... [more]
XP_038881110.19.7e-6297.7360S ribosomal protein L14-2-like [Benincasa hispida][more]
KAG7018796.19.7e-6297.7360S ribosomal protein L14-2 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022924785.19.7e-6297.7360S ribosomal protein L14-2-like [Cucurbita moschata] >XP_022979350.1 60S riboso... [more]
BLAST of MS010405.1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9T0437.8e-5485.9460S ribosomal protein L14-2 OS=Arabidopsis thaliana OX=3702 GN=RPL14B PE=1 SV=1[more]
Q9SIM42.9e-5384.3860S ribosomal protein L14-1 OS=Arabidopsis thaliana OX=3702 GN=RPL14A PE=2 SV=1[more]
P558441.9e-5280.77Probable 60S ribosomal protein L14 OS=Pisum sativum OX=3888 PE=2 SV=1[more]
Q7XYA74.4e-2551.5460S ribosomal protein L14 OS=Griffithsia japonica OX=83288 GN=RPL14 PE=2 SV=1[more]
O461602.9e-2448.0960S ribosomal protein L14 OS=Lumbricus rubellus OX=35632 GN=RPL14 PE=3 SV=1[more]
BLAST of MS010405.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DJX21.2e-6299.2460S ribosomal protein L14-2-like OS=Momordica charantia OX=3673 GN=LOC111020745 ... [more]
A0A6J1IGF22.1e-6298.4860S ribosomal protein L14-2-like OS=Cucurbita maxima OX=3661 GN=LOC111473179 PE=... [more]
A0A6J1G6E82.1e-6298.4860S ribosomal protein L14-2-like OS=Cucurbita moschata OX=3662 GN=LOC111451284 P... [more]
A0A6J1IT014.7e-6297.7360S ribosomal protein L14-2-like OS=Cucurbita maxima OX=3661 GN=LOC111479102 PE=... [more]
A0A6J1EG144.7e-6297.7360S ribosomal protein L14-2-like OS=Cucurbita moschata OX=3662 GN=LOC111432177 P... [more]
BLAST of MS010405.1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G27090.15.5e-5585.94Ribosomal protein L14 [more]
AT2G20450.12.1e-5484.38Ribosomal protein L14 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D6.10.250.2270coord: 91..126
e-value: 3.4E-11
score: 44.7
NoneNo IPR availablePANTHERPTHR11127:SF11RIBOSOMAL PROTEIN L14, PUTATIVE-RELATEDcoord: 1..130
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 1..83
e-value: 9.4E-38
score: 130.2
IPR002784Ribosomal protein L14e domainPFAMPF01929Ribosomal_L14ecoord: 44..116
e-value: 3.1E-25
score: 88.5
IPR039660Ribosomal protein L14PANTHERPTHR1112760S RIBOSOMAL PROTEIN L14coord: 1..130
IPR041985Ribosomal protein L14, KOW motifCDDcd06088KOW_RPL14coord: 6..78
e-value: 4.44231E-21
score: 78.6714
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 4..92

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MS010405MS010405gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MS010405.1-cdsMS010405.1-cds-scaffold878:681807..681857CDS
MS010405.1-cdsMS010405.1-cds-scaffold878:682078..682190CDS
MS010405.1-cdsMS010405.1-cds-scaffold878:682288..682417CDS
MS010405.1-cdsMS010405.1-cds-scaffold878:683038..683139CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MS010405.1MS010405.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome