MS010072.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS010072.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	GATA transcription factor
Location	scaffold779: 376885 .. 378203 (-)
Sequence length	909
RNA-Seq Expression	MS010072.1
Synteny	MS010072.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCGGAGACAGTTTCGCCGACGAGATTGACTGCGGCAGTTTCTTTGACCACATCGACGACCTCCTCGATTTCCCCACCGGAGACCTGGACGACGTCGCTTTCTCCGCCAACGCCGACTGCAACTCCGCCTTTCCCCCCATTTGGTCCACTCACTCCGCCGCCGACTCCGCCGATCTCTCTGTTCCGGTCAGTTCTCCACACAATATCACTGACGTCATAATTAAGAATTAAAGCTCTAAAACTAATAAATTTTGGAGGAATAAATACGCGTTTGAAAGTTTCAAAAAAAAAAAAAAGAGTAAAAAATTGGGATTTTTTTTAAAAATTTGTGAATTGATTCGAGTTAATTGTGTGCGGTACTCCATTCTCATTGTAATTAATTAATGATTTTTTTAGAAAATTTTTATTATTTTTTATTAAAATGAGCAAGTGAACAAAAACGTAAATTGCTCATCCAAATCAATCTATCTAAATAAAAAAATATCATTGATTTTAAAATTGTAAAAATTTAAAAATAAGGGGTTTTGATTCCCTACTTCGCAGACCAGGGTAAGATCTGATGGTCACAAATTGATGAAGTTTTGCTCTGTTTTCAGTACGAAGACATCGTTCAACTGGAATGGCTTTCAAATTTCGTCGATGATTCCTTCTCCGGCGCAGGAACCCTAACCATCAACACCTCCTCCATTTCGCCGTCGTCGTCGGCGGCACCAAACCAATTTCACACCTCAAGTCCGGTTTCCGTTCTCGACAGCAGCAGCAGCAGCAGCTCCGACTCCGGCGATAAAAAAGCCCTAGCCGCCAGTAAACGCGGCCGTCCTCGCAGCAAGCGACCTCGGCCGCCGACATTCATTCCCCGGCCGCCGCAGCTCGTTTCGCCGGCGACTTCCGAAGCCGCAACCGGAAAGGCGTCATCGGATTCCGAGAACTACGCCGAGTCCTGTTCTCCCTCTCCGCCGAGCAACAAGAACAAGAAAATCAAATTGTCGTTCCGGCGAGATCGAAACGATGCGTTTAATCAAGGCGTTAGAAAATGCTTGCACTGCGAAGTGACAAAGACGCCGCAGTGGAGGGCGGGGCCATTAGGGCCGAAAACTCTCTGCAACGCCTGCGGCGTCCGCTACAAATCCGGCCGCCTCTTCCCGGAATACCGGCCGGCGGCAAGTCCGACTTTCGTTCCGCGTTTACACTCCAATTCGCACAAGAAGGTTATCGAAATGAGAACCAAACAAGACGAAAAAGCCGCAAAATCTCCGGCGGAAGAGTCGCCGGAGCTCATTCCGAATATTAACTCTGGCATTGCCCTCGATTACGTG

mRNA sequence

ATGATCGGAGACAGTTTCGCCGACGAGATTGACTGCGGCAGTTTCTTTGACCACATCGACGACCTCCTCGATTTCCCCACCGGAGACCTGGACGACGTCGCTTTCTCCGCCAACGCCGACTGCAACTCCGCCTTTCCCCCCATTTGGTCCACTCACTCCGCCGCCGACTCCGCCGATCTCTCTGTTCCGTACGAAGACATCGTTCAACTGGAATGGCTTTCAAATTTCGTCGATGATTCCTTCTCCGGCGCAGGAACCCTAACCATCAACACCTCCTCCATTTCGCCGTCGTCGTCGGCGGCACCAAACCAATTTCACACCTCAAGTCCGGTTTCCGTTCTCGACAGCAGCAGCAGCAGCAGCTCCGACTCCGGCGATAAAAAAGCCCTAGCCGCCAGTAAACGCGGCCGTCCTCGCAGCAAGCGACCTCGGCCGCCGACATTCATTCCCCGGCCGCCGCAGCTCGTTTCGCCGGCGACTTCCGAAGCCGCAACCGGAAAGGCGTCATCGGATTCCGAGAACTACGCCGAGTCCTGTTCTCCCTCTCCGCCGAGCAACAAGAACAAGAAAATCAAATTGTCGTTCCGGCGAGATCGAAACGATGCGTTTAATCAAGGCGTTAGAAAATGCTTGCACTGCGAAGTGACAAAGACGCCGCAGTGGAGGGCGGGGCCATTAGGGCCGAAAACTCTCTGCAACGCCTGCGGCGTCCGCTACAAATCCGGCCGCCTCTTCCCGGAATACCGGCCGGCGGCAAGTCCGACTTTCGTTCCGCGTTTACACTCCAATTCGCACAAGAAGGTTATCGAAATGAGAACCAAACAAGACGAAAAAGCCGCAAAATCTCCGGCGGAAGAGTCGCCGGAGCTCATTCCGAATATTAACTCTGGCATTGCCCTCGATTACGTG

Coding sequence (CDS)

ATGATCGGAGACAGTTTCGCCGACGAGATTGACTGCGGCAGTTTCTTTGACCACATCGACGACCTCCTCGATTTCCCCACCGGAGACCTGGACGACGTCGCTTTCTCCGCCAACGCCGACTGCAACTCCGCCTTTCCCCCCATTTGGTCCACTCACTCCGCCGCCGACTCCGCCGATCTCTCTGTTCCGTACGAAGACATCGTTCAACTGGAATGGCTTTCAAATTTCGTCGATGATTCCTTCTCCGGCGCAGGAACCCTAACCATCAACACCTCCTCCATTTCGCCGTCGTCGTCGGCGGCACCAAACCAATTTCACACCTCAAGTCCGGTTTCCGTTCTCGACAGCAGCAGCAGCAGCAGCTCCGACTCCGGCGATAAAAAAGCCCTAGCCGCCAGTAAACGCGGCCGTCCTCGCAGCAAGCGACCTCGGCCGCCGACATTCATTCCCCGGCCGCCGCAGCTCGTTTCGCCGGCGACTTCCGAAGCCGCAACCGGAAAGGCGTCATCGGATTCCGAGAACTACGCCGAGTCCTGTTCTCCCTCTCCGCCGAGCAACAAGAACAAGAAAATCAAATTGTCGTTCCGGCGAGATCGAAACGATGCGTTTAATCAAGGCGTTAGAAAATGCTTGCACTGCGAAGTGACAAAGACGCCGCAGTGGAGGGCGGGGCCATTAGGGCCGAAAACTCTCTGCAACGCCTGCGGCGTCCGCTACAAATCCGGCCGCCTCTTCCCGGAATACCGGCCGGCGGCAAGTCCGACTTTCGTTCCGCGTTTACACTCCAATTCGCACAAGAAGGTTATCGAAATGAGAACCAAACAAGACGAAAAAGCCGCAAAATCTCCGGCGGAAGAGTCGCCGGAGCTCATTCCGAATATTAACTCTGGCATTGCCCTCGATTACGTG

Protein sequence

MIGDSFADEIDCGSFFDHIDDLLDFPTGDLDDVAFSANADCNSAFPPIWSTHSAADSADLSVPYEDIVQLEWLSNFVDDSFSGAGTLTINTSSISPSSSAAPNQFHTSSPVSVLDSSSSSSSDSGDKKALAASKRGRPRSKRPRPPTFIPRPPQLVSPATSEAATGKASSDSENYAESCSPSPPSNKNKKIKLSFRRDRNDAFNQGVRKCLHCEVTKTPQWRAGPLGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPRLHSNSHKKVIEMRTKQDEKAAKSPAEESPELIPNINSGIALDYV

Homology

[Close]

BLAST of MS010072.1 vs. NCBI nr
Match: XP_038886093.1 (GATA transcription factor 8-like [Benincasa hispida])

HSP 1 Score: 422.2 bits (1084), Expect = 3.9e-114
Identity = 239/321 (74.45%), Postives = 259/321 (80.69%), Query Frame = 0


Query: 7   ADEIDCGSFFDHIDDLLDFPTGDLDDVAFSANADCNSAFPPIWSTHS------------A 66
           ADEIDCG+FFDHIDDLLDFPT +LDDVAF+  A    AFPPIW+THS            +
Sbjct: 3   ADEIDCGNFFDHIDDLLDFPTENLDDVAFTNVA----AFPPIWTTHSDSLPSAVVDPVFS 62

Query: 67  AD------SADLSVPYEDIVQLEWLSNFVDDSFSGAGTLTINTSSISPSSSAAPNQFHTS 126
           AD      SA+L  PY+D+VQLEWLSNFVDDSFSGAGTLTINTSS+SPS     NQFHTS
Sbjct: 63  ADTGDSGLSAELPAPYDDMVQLEWLSNFVDDSFSGAGTLTINTSSLSPS-----NQFHTS 122

Query: 127 SPVSVLDSSSSSSSDSG--DKKAL--AASKRGRPRSKRPRPPTFIPRPPQLVSPATSEAA 186
           SPVSVLDSSSSSSS S   +KKAL  AA +RGR RSKRPRPP+FIPRPPQL+SP  S   
Sbjct: 123 SPVSVLDSSSSSSSSSSSDEKKALATAAGRRGRARSKRPRPPSFIPRPPQLISPTNS--- 182

Query: 187 TGKASSDSENYAESCSPSPPSNKNKKIKLSFRRDRNDAFN-QGVRKCLHCEVTKTPQWRA 246
            GK SS+S+NYAESCSP PP+ K KKIKLS+RRD+NDAFN QGVRKCLHCEVTKTPQWRA
Sbjct: 183 GGKVSSESDNYAESCSPPPPAKKPKKIKLSYRRDQNDAFNPQGVRKCLHCEVTKTPQWRA 242

Query: 247 GPLGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPRLHSNSHKKVIEMRTKQDEKAAKSP 304
           GPLGPKTLCNACGVRYKSGRL+PEYRPAASPTFVP LHSNSHKKV+EMR KQ EK A   
Sbjct: 243 GPLGPKTLCNACGVRYKSGRLYPEYRPAASPTFVPCLHSNSHKKVLEMRIKQVEKGAGFT 302

[Close]

BLAST of MS010072.1 vs. NCBI nr
Match: XP_023514934.1 (GATA transcription factor 8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 395.6 bits (1015), Expect = 3.9e-106
Identity = 229/319 (71.79%), Postives = 251/319 (78.68%), Query Frame = 0


Query: 1   MIGDSFADEIDCGSFFDHIDDLLDFPTGDLDD-VAFSANADCNSAFPPIWSTHSAADSAD 60
           MIG++F+DE+DCG+FFD IDDLLDFPT D DD  A + NA   +AFPPIWS+ S   +AD
Sbjct: 1   MIGETFSDEMDCGNFFDQIDDLLDFPTEDFDDHGALTTNA---AAFPPIWSSASLPHAAD 60

Query: 61  -----------LSVPYEDIVQLEWLSNFVDDSFSGAGTLTINTSSISPSSSAAPNQFHTS 120
                      LSVPYEDI QLEWLSNF+DDS SGA TLTINTSS+SP+     NQF  S
Sbjct: 61  SVFSGDTHHSALSVPYEDIDQLEWLSNFIDDSSSGAETLTINTSSLSPA-----NQFQIS 120

Query: 121 SPVSVLDSSSSSSSD-SGDKKALA-ASKRGRPRSKRPRPPTFIPRPPQLVSPATSEAATG 180
           SPVSVLDSSSSSSS  SG+KK LA A KRGR RSKR RPP+FIPRPPQL+SP  S    G
Sbjct: 121 SPVSVLDSSSSSSSSCSGEKKTLAVAGKRGRARSKRSRPPSFIPRPPQLISPTNS---GG 180

Query: 181 KASSDSENYAESCSPSPP-SNKNKKIKLSFRRDRNDAFN-QGVRKCLHCEVTKTPQWRAG 240
           K SSDSENY ESCS  PP   K KKIKLSFRRD+NDAF+ QGVRKCLHCEVTKTPQWRAG
Sbjct: 181 KVSSDSENYGESCSAPPPLVKKTKKIKLSFRRDQNDAFSPQGVRKCLHCEVTKTPQWRAG 240

Query: 241 PLGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPRLHSNSHKKVIEMRTKQDEKAAKSPA 300
           PLGPKTLCNACGVRYKSGRLFPEYRPAASPTFVP LHSNSH+KV+EMRTKQ+E A ++  
Sbjct: 241 PLGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPCLHSNSHRKVLEMRTKQEEIAVET-- 300

Query: 301 EESPELIPNINSGIALDYV 304
           E   ELIPN NSGI L YV
Sbjct: 301 ELPTELIPNTNSGIVLGYV 306

[Close]

BLAST of MS010072.1 vs. NCBI nr
Match: XP_022922376.1 (GATA transcription factor 8-like [Cucurbita moschata])

HSP 1 Score: 393.7 bits (1010), Expect = 1.5e-105
Identity = 228/319 (71.47%), Postives = 251/319 (78.68%), Query Frame = 0


Query: 1   MIGDSFADEIDCGSFFDHIDDLLDFPTGDL-DDVAFSANADCNSAFPPIWSTHSAADSAD 60
           MIG++F+DE+DCG+FFD IDDLLDFPT D  DD A ++ A   +AFPPIWS+ S   +AD
Sbjct: 1   MIGETFSDEMDCGNFFDQIDDLLDFPTEDFDDDGALTSKA---AAFPPIWSSASLPHAAD 60

Query: 61  -----------LSVPYEDIVQLEWLSNFVDDSFSGAGTLTINTSSISPSSSAAPNQFHTS 120
                      LSVPYEDI QLEWLSNF+DDS SGA TLTINTSS+SP+     NQF  S
Sbjct: 61  SVFSGDTHHSALSVPYEDIDQLEWLSNFIDDSSSGAETLTINTSSLSPA-----NQFQIS 120

Query: 121 SPVSVLDSSSSSSSD-SGDKKALA-ASKRGRPRSKRPRPPTFIPRPPQLVSPATSEAATG 180
           SPVSVLDSSSSSSS  SG+KK LA A KRGR RSKR RPP+FIPRPPQL+SP  S    G
Sbjct: 121 SPVSVLDSSSSSSSSCSGEKKTLAVAGKRGRARSKRSRPPSFIPRPPQLISPTNS---GG 180

Query: 181 KASSDSENYAESCSPSPP-SNKNKKIKLSFRRDRNDAFN-QGVRKCLHCEVTKTPQWRAG 240
           K SSDSENY ESCS  PP   K KKIKLSFRRD+NDAF+ QGVRKCLHCEVTKTPQWRAG
Sbjct: 181 KVSSDSENYGESCSAPPPLVKKTKKIKLSFRRDQNDAFSPQGVRKCLHCEVTKTPQWRAG 240

Query: 241 PLGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPRLHSNSHKKVIEMRTKQDEKAAKSPA 300
           PLGPKTLCNACGVRYKSGRLFPEYRPAASPTFVP LHSNSH+KV+EMRTKQ+E A ++  
Sbjct: 241 PLGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPCLHSNSHRKVLEMRTKQEEIAVET-- 300

Query: 301 EESPELIPNINSGIALDYV 304
           E   ELIPN NSGI L YV
Sbjct: 301 ELPTELIPNTNSGIVLGYV 306

[Close]

BLAST of MS010072.1 vs. NCBI nr
Match: KAG6602312.1 (Auxin response factor 18, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 388.7 bits (997), Expect = 4.8e-104
Identity = 226/318 (71.07%), Postives = 248/318 (77.99%), Query Frame = 0


Query: 1   MIGDSFADEIDCGSFFDHIDDLLDFPTGDL-DDVAFSANADCNSAFPPIWSTHSAADSAD 60
           MIG++F+DE+DCG+FFD IDDLLDFPT D  DD A + NA   +AFPPIWS+ +   +AD
Sbjct: 1   MIGETFSDEMDCGNFFDQIDDLLDFPTEDFDDDGALTTNA---AAFPPIWSSAALPHAAD 60

Query: 61  -----------LSVPYEDIVQLEWLSNFVDDSFSGAGTLTINTSSISPSSSAAPNQFHTS 120
                      LSVPYEDI QLEWLSNF+DDS SGA TLTINTSS+SP+     NQF  S
Sbjct: 61  SVFSGNTHHSALSVPYEDIDQLEWLSNFIDDSSSGAETLTINTSSLSPA-----NQFQIS 120

Query: 121 SPVSVLDSSSSSSSD-SGDKKALA-ASKRGRPRSKRPRPPTFIPRPPQLVSPATSEAATG 180
           SPVSVLDSSSSSSS  SG+KK LA A KRGR RSKR RPP+FIPRPPQL+S   S    G
Sbjct: 121 SPVSVLDSSSSSSSSCSGEKKTLAVAGKRGRTRSKRSRPPSFIPRPPQLISATNS---GG 180

Query: 181 KASSDSENYAESCSPSP-PSNKNKKIKLSFRRDRNDAFN-QGVRKCLHCEVTKTPQWRAG 240
           K SSDSENY ESCS  P P  K KKIKLSFRRD+NDAF+ QGVRKCLHCEVTKTPQWRAG
Sbjct: 181 KVSSDSENYGESCSAPPLPVKKTKKIKLSFRRDQNDAFSPQGVRKCLHCEVTKTPQWRAG 240

Query: 241 PLGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPRLHSNSHKKVIEMRTKQDEKAAKSPA 300
           PLGPKTLCNACGVRYKSGRLFPEYRPAASPTFVP LHSNSH+KV+EMRTKQ+E A  +  
Sbjct: 241 PLGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPCLHSNSHRKVLEMRTKQEEIAVVT-- 300

Query: 301 EESPELIPNINSGIALDY 303
           E   ELIPN NSGI L Y
Sbjct: 301 ELPTELIPNTNSGIVLGY 305

[Close]

BLAST of MS010072.1 vs. NCBI nr
Match: KAG7032992.1 (GATA transcription factor 8 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 384.0 bits (985), Expect = 1.2e-102
Identity = 225/319 (70.53%), Postives = 247/319 (77.43%), Query Frame = 0


Query: 1   MIGDSFADEIDCGSFFDHIDDLLDFPTGDL-DDVAFSANADCNSAFPPIWSTHSAADSAD 60
           MIG++F+DE+DCG+FFD IDDLLDFPT D  DD A + NA   +AFPPIWS+ +   +AD
Sbjct: 1   MIGETFSDEMDCGNFFDQIDDLLDFPTEDFDDDGALTTNA---AAFPPIWSSAALPHAAD 60

Query: 61  -----------LSVPYEDIVQLEWLSNFVDDSFSGAGTLTINTSSISPSSSAAPNQFHTS 120
                      LSVPYEDI QLEWLSNF+DDS SGA TLTINTSS+SP+     NQF  S
Sbjct: 61  SVFSGNTHHSALSVPYEDIDQLEWLSNFIDDSSSGAETLTINTSSLSPA-----NQFQIS 120

Query: 121 SPVSVLDSSSSSSSD-SGDKKALA-ASKRGRPRSKRPRPPTFIPRPPQLVSPATSEAATG 180
           SPVSVLDSSSSSSS  SG+KK LA A KRGR RSKR RPP+FIPR PQL+S   S     
Sbjct: 121 SPVSVLDSSSSSSSSCSGEKKTLAVAGKRGRTRSKRSRPPSFIPRLPQLISATNSGV--- 180

Query: 181 KASSDSENYAESCSPSP-PSNKNKKIKLSFRRDRNDAFN-QGVRKCLHCEVTKTPQWRAG 240
           K SSDSENY ESCS  P P  K KKIKLSFRRD+NDAF+ QGVRKCLHCEVTKTPQWRAG
Sbjct: 181 KVSSDSENYGESCSAPPLPVKKTKKIKLSFRRDQNDAFSPQGVRKCLHCEVTKTPQWRAG 240

Query: 241 PLGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPRLHSNSHKKVIEMRTKQDEKAAKSPA 300
           PLGPKTLCNACGVRYKSGRLFPEYRPAASPTFVP LHSNSH+KV+EMRTKQ+E A  +  
Sbjct: 241 PLGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPCLHSNSHRKVLEMRTKQEEIAVVT-- 300

Query: 301 EESPELIPNINSGIALDYV 304
           E   ELIPN NSGI L YV
Sbjct: 301 ELPTELIPNTNSGIVLGYV 306

[Close]

BLAST of MS010072.1 vs. ExPASy Swiss-Prot
Match: Q9SV30 (GATA transcription factor 8 OS=Arabidopsis thaliana OX=3702 GN=GATA8 PE=1 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 6.5e-56
Identity = 149/338 (44.08%), Postives = 198/338 (58.58%), Query Frame = 0


Query: 1   MIGDSFADEIDCGSFFDHIDDLLDFPTGDLDDVAFSANADCNSAFPPIWSTH-----SAA 60
           MIG SF +++DCG+FFD++DDL+DFP GD+ DV F      + +FP IW+TH     +A+
Sbjct: 1   MIGTSFPEDLDCGNFFDNMDDLMDFPGGDI-DVGFGIGD--SDSFPTIWTTHHDTWPAAS 60

Query: 61  D-----------SADLSVPYEDIVQLEWLSNFVDDSFSGAGTLTINTSSISPSSSAAPNQ 120
           D           S +L VP+EDIV++E   +FV+++       + +T++    SS++ +Q
Sbjct: 61  DPLFSSNTNSDSSPELYVPFEDIVKVERPPSFVEETLVEKKEDSFSTNT---DSSSSHSQ 120

Query: 121 FHTSSPVSVLDSSSSSSSDSGDKKALAASKRGRPRSKRPRPPT----------------- 180
           F +SSPVSVL+SSSSSS  +     +   K GRPR+KRPRPP                  
Sbjct: 121 FRSSSPVSVLESSSSSSQTTNTTSLVLPGKHGRPRTKRPRPPVQDKDRVKDNVCGGDSRL 180

Query: 181 FIPRPPQLVSPATSEAATGKASSDSENYAESCSPSPPSNKNKKIKLSFRRDRNDAFNQ-- 240
            I  P Q +S           +   +  A+  S S  S     I L    +  D+++   
Sbjct: 181 IIRIPKQFLSDHNK-----MINKKKKKKAKITSSSSSSG----IDLEVNGNNVDSYSSEQ 240

Query: 241 -GVRKCLHCEVTKTPQWRAGPLGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPRLHSNS 300
             +RKC+HCEVTKTPQWR GP+GPKTLCNACGVRYKSGRLFPEYRPAASPTF P LHSNS
Sbjct: 241 YPLRKCMHCEVTKTPQWRLGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFTPALHSNS 300

Query: 301 HKKVIEMRTKQDEKAAKSPAEESPE-LIPNINSGIALD 302
           HKKV EMR K+    +    E   + LIPN N+ I +D
Sbjct: 301 HKKVAEMRNKRCSDGSYITEENDLQGLIPN-NAYIGVD 322

[Close]

BLAST of MS010072.1 vs. ExPASy Swiss-Prot
Match: Q6DBP8 (GATA transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=GATA11 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.0e-32
Identity = 112/285 (39.30%), Postives = 148/285 (51.93%), Query Frame = 0


Query: 13  GSFFDHIDDLLDFPTGDLD---------DVAFSANADCNSAFPPIWSTHSAADSADLSVP 72
           G FFD + + LD P  D+D         D            FP + S  ++  S     P
Sbjct: 19  GDFFDDLINHLDVPLDDIDTTNGEGDWVDRFQDLEPPPMDMFPTLPSDLTSCGSGMAKAP 78

Query: 73  YEDIVQLEWLSNFVDDSFSGAGTLTINTSSISPSSSAAPNQFHTSSPVSVLDSS-SSSSS 132
             DI +   +        S A + T++ SS  P    +   F + SPVSVL++S  S S+
Sbjct: 79  RVDIQRN--IPALKQSYSSEALSSTLHQSSAPPEIKVS-KLFQSLSPVSVLENSYGSLST 138

Query: 133 DSGDKKALAASKRGRPRSKRPRPPT-----FIPRPPQLVSPATSEAATGKASSDSENYAE 192
            +   + LA   +G  RSKR RP T       P  P+    +T      +    SE +A+
Sbjct: 139 HNNGSQRLAFPVKGM-RSKRKRPTTLRLSYLFPSEPRKPEKSTPGKPESECYFSSEQHAK 198

Query: 193 SCSPSPPSNKNKKIKLSFRRDRN--DAFNQG--VRKCLHCEVTKTPQWRAGPLGPKTLCN 252
                    K +KI L+ R   +  +A N    VRKC HCE TKTPQWR GP GPKTLCN
Sbjct: 199 ---------KKRKIHLTTRTVSSTLEASNSDGIVRKCTHCETTKTPQWREGPSGPKTLCN 258

Query: 253 ACGVRYKSGRLFPEYRPAASPTFVPRLHSNSHKKVIEMRTKQDEK 279
           ACGVR++SGRL PEYRPA+SPTF+P +HSNSH+K+IEMR K DE+
Sbjct: 259 ACGVRFRSGRLVPEYRPASSPTFIPAVHSNSHRKIIEMRRKDDEQ 290

[Close]

BLAST of MS010072.1 vs. ExPASy Swiss-Prot
Match: O49743 (GATA transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=GATA4 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 8.6e-32
Identity = 103/272 (37.87%), Postives = 131/272 (48.16%), Query Frame = 0


Query: 19  IDDLLDFPTGDL-------DDVAFSANADCNSAFPPIWSTHSAAD-----SADLSVPYED 78
           IDDLLDF   ++          A S+ A   + F    ST+++       + DL VP +D
Sbjct: 14  IDDLLDFSNDEIFSSSSTVTSSAASSAASSENPFSFPSSTYTSPTLLTDFTHDLCVPSDD 73

Query: 79  IVQLEWLSNFVDDSFSGAGTLTINTSSISPSSSAAPNQFHTSSPVSVLDSSSSSSSDSGD 138
              LEWLS FVDDSFS      + T ++ P  S                           
Sbjct: 74  AAHLEWLSRFVDDSFSDFPANPL-TMTVRPEISFT------------------------- 133

Query: 139 KKALAASKRGRPRSKRPRPPTFIPRPPQLVSPATSEAATGKASSDSENYAESCSPSPPSN 198
                    G+PRS+R R            +PA S A T    S+SE       P P   
Sbjct: 134 ---------GKPRSRRSR------------APAPSVAGTWAPMSESELCHSVAKPKP--- 193

Query: 199 KNKKIKLSFRRDRNDAFNQGVRKCLHCEVTKTPQWRAGPLGPKTLCNACGVRYKSGRLFP 258
             KK+      +       G R+C HC   KTPQWR GPLGPKTLCNACGVRYKSGRL P
Sbjct: 194 --KKV-----YNAESVTADGARRCTHCASEKTPQWRTGPLGPKTLCNACGVRYKSGRLVP 228

Query: 259 EYRPAASPTFVPRLHSNSHKKVIEMRTKQDEK 279
           EYRPA+SPTFV   HSNSH+KV+E+R +++++
Sbjct: 254 EYRPASSPTFVLTQHSNSHRKVMELRRQKEQQ 228

[Close]

BLAST of MS010072.1 vs. ExPASy Swiss-Prot
Match: O82632 (GATA transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=GATA9 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 9.5e-31
Identity = 100/272 (36.76%), Postives = 139/272 (51.10%), Query Frame = 0


Query: 19  IDDLLDFPT--GDLDDVAFSANADCNSAFPPIWSTHSAADS--------ADLSVPYEDIV 78
           +DDLLDF    G++DD   +   D ++      +  S + S        +DL +P +DI 
Sbjct: 20  VDDLLDFSNDDGEVDD-GLNTLPDSSTLSTGTLTDSSNSSSLFTDGTGFSDLYIPNDDIA 79

Query: 79  QLEWLSNFVDDSFSGAGTLTINT-SSISPSSSAAPNQFHTSSPVSVLDSSSSSSSDSGDK 138
           +LEWLSNFV++SF+G     ++  S +    +      H   P   LD       +S   
Sbjct: 80  ELEWLSNFVEESFAGEDQDKLHLFSGLKNPQTTGSTLTHLIKPEPELDHQFIDIDESN-- 139

Query: 139 KALAASKRGRPRSKRPRPPTFIPRPPQLVSPATSEAATGKASSDSENYAESCSPSPPSNK 198
             +A   + R +  R    T+  R   L            A SD  N         P  K
Sbjct: 140 --VAVPAKARSKRSRSAASTWASRLLSL------------ADSDETN---------PKKK 199

Query: 199 NKKIK---LSFRRDRNDAFNQGVRKCLHCEVTKTPQWRAGPLGPKTLCNACGVRYKSGRL 258
            +++K    +   D +   + G R+CLHC   KTPQWR GP+GPKTLCNACGVRYKSGRL
Sbjct: 200 QRRVKEQDFAGDMDVDCGESGGGRRCLHCATEKTPQWRTGPMGPKTLCNACGVRYKSGRL 259

Query: 259 FPEYRPAASPTFVPRLHSNSHKKVIEMRTKQD 277
            PEYRPA+SPTFV   HSNSH+KV+E+R +++
Sbjct: 260 VPEYRPASSPTFVMARHSNSHRKVMELRRQKE 265

[Close]

BLAST of MS010072.1 vs. ExPASy Swiss-Prot
Match: O49741 (GATA transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=GATA2 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 6.2e-30
Identity = 102/277 (36.82%), Postives = 131/277 (47.29%), Query Frame = 0


Query: 19  IDDLLDFPTGDLDDVAFSAN---ADCNSAFP----PIWSTHSAADSA-------DLSVPY 78
           IDDLLDF   D+   + S     A  +S+FP    P +  H    SA       D+ VP 
Sbjct: 14  IDDLLDFSNEDIFSASSSGGSTAATSSSSFPPPQNPSFHHHHLPSSADHHSFLHDICVPS 73

Query: 79  EDIVQLEWLSNFVDDSFSGAGTLTINTSSISPSSSAAPNQFHTSSPVSVLDSSSSSSSDS 138
           +D   LEWLS FVDDSF+                           P + L  + +S    
Sbjct: 74  DDAAHLEWLSQFVDDSFA-------------------------DFPANPLGGTMTSVKTE 133

Query: 139 GDKKALAASKRGRPRSKRPRPP-----TFIPRPPQLVSPATSEAATGKASSDSENYAESC 198
                   S  G+PRSKR R P     T+ P P +        AA  K   +        
Sbjct: 134 -------TSFPGKPRSKRSRAPAPFAGTWSPMPLESEHQQLHSAAKFKPKKEQSGGGGGG 193

Query: 199 SPSPPSNKNKKIKLSFRRDRNDAFNQGVRKCLHCEVTKTPQWRAGPLGPKTLCNACGVRY 258
                S+ ++  +             G+R+C HC   KTPQWR GPLGPKTLCNACGVR+
Sbjct: 194 GGRHQSSSSETTE-----------GGGMRRCTHCASEKTPQWRTGPLGPKTLCNACGVRF 247

Query: 259 KSGRLFPEYRPAASPTFVPRLHSNSHKKVIEMRTKQD 277
           KSGRL PEYRPA+SPTFV   HSNSH+KV+E+R +++
Sbjct: 254 KSGRLVPEYRPASSPTFVLTQHSNSHRKVMELRRQKE 247

[Close]

BLAST of MS010072.1 vs. ExPASy TrEMBL
Match: A0A6J1E3Z2 (GATA transcription factor OS=Cucurbita moschata OX=3662 GN=LOC111430384 PE=3 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 7.2e-106
Identity = 228/319 (71.47%), Postives = 251/319 (78.68%), Query Frame = 0


Query: 1   MIGDSFADEIDCGSFFDHIDDLLDFPTGDL-DDVAFSANADCNSAFPPIWSTHSAADSAD 60
           MIG++F+DE+DCG+FFD IDDLLDFPT D  DD A ++ A   +AFPPIWS+ S   +AD
Sbjct: 1   MIGETFSDEMDCGNFFDQIDDLLDFPTEDFDDDGALTSKA---AAFPPIWSSASLPHAAD 60

Query: 61  -----------LSVPYEDIVQLEWLSNFVDDSFSGAGTLTINTSSISPSSSAAPNQFHTS 120
                      LSVPYEDI QLEWLSNF+DDS SGA TLTINTSS+SP+     NQF  S
Sbjct: 61  SVFSGDTHHSALSVPYEDIDQLEWLSNFIDDSSSGAETLTINTSSLSPA-----NQFQIS 120

Query: 121 SPVSVLDSSSSSSSD-SGDKKALA-ASKRGRPRSKRPRPPTFIPRPPQLVSPATSEAATG 180
           SPVSVLDSSSSSSS  SG+KK LA A KRGR RSKR RPP+FIPRPPQL+SP  S    G
Sbjct: 121 SPVSVLDSSSSSSSSCSGEKKTLAVAGKRGRARSKRSRPPSFIPRPPQLISPTNS---GG 180

Query: 181 KASSDSENYAESCSPSPP-SNKNKKIKLSFRRDRNDAFN-QGVRKCLHCEVTKTPQWRAG 240
           K SSDSENY ESCS  PP   K KKIKLSFRRD+NDAF+ QGVRKCLHCEVTKTPQWRAG
Sbjct: 181 KVSSDSENYGESCSAPPPLVKKTKKIKLSFRRDQNDAFSPQGVRKCLHCEVTKTPQWRAG 240

Query: 241 PLGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPRLHSNSHKKVIEMRTKQDEKAAKSPA 300
           PLGPKTLCNACGVRYKSGRLFPEYRPAASPTFVP LHSNSH+KV+EMRTKQ+E A ++  
Sbjct: 241 PLGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPCLHSNSHRKVLEMRTKQEEIAVET-- 300

Query: 301 EESPELIPNINSGIALDYV 304
           E   ELIPN NSGI L YV
Sbjct: 301 ELPTELIPNTNSGIVLGYV 306

[Close]

BLAST of MS010072.1 vs. ExPASy TrEMBL
Match: A0A6J1JQ22 (GATA transcription factor OS=Cucurbita maxima OX=3661 GN=LOC111487284 PE=3 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 8.2e-102
Identity = 222/311 (71.38%), Postives = 242/311 (77.81%), Query Frame = 0


Query: 10  IDCGSFFDHIDDLLDFPTGDL--DDVAFSANADCNSAFPPIWSTHSAADSAD-------- 69
           +DCG+FFD IDDLLDFPT D   DD A + NA   ++FPPIWS+ S   +AD        
Sbjct: 1   MDCGNFFDQIDDLLDFPTEDFDDDDGALTTNA---ASFPPIWSSASLPHAADSVFSGNTP 60

Query: 70  ---LSVPYEDIVQLEWLSNFVDDSFSGAGTLTINTSSISPSSSAAPNQFHTSSPVSVLDS 129
              LSVPYEDI QLEWLSNF+DDS SGA TLTINTSS+SP+     NQF  SSPVSVLDS
Sbjct: 61  HSALSVPYEDIDQLEWLSNFIDDSSSGAETLTINTSSLSPA-----NQFQISSPVSVLDS 120

Query: 130 SSSSSSD-SGDKKALA-ASKRGRPRSKRPRPPTFIPRPPQLVSPATSEAATGKASSDSEN 189
           SSSSSS  SG+KK LA A KRGR RSKR RPP+FIPRPPQL+SP  S    GK SSDSEN
Sbjct: 121 SSSSSSSCSGEKKTLAVAGKRGRARSKRSRPPSFIPRPPQLISPTNS---GGKVSSDSEN 180

Query: 190 YAESCSPSP-PSNKNKKIKLSFRRDRNDAFN-QGVRKCLHCEVTKTPQWRAGPLGPKTLC 249
           Y ESCS  P P  K KKIKLSFRRD+NDAF+ QGVRKCLHCEVTKTPQWRAGPLGPKTLC
Sbjct: 181 YGESCSAPPLPVKKTKKIKLSFRRDQNDAFSPQGVRKCLHCEVTKTPQWRAGPLGPKTLC 240

Query: 250 NACGVRYKSGRLFPEYRPAASPTFVPRLHSNSHKKVIEMRTKQDEKAAKSPAEESPELIP 304
           NACGVRYKSGRLFPEYRPAASPTFVP LHSNSH+KV+EMRTKQ+E A ++  E   ELIP
Sbjct: 241 NACGVRYKSGRLFPEYRPAASPTFVPCLHSNSHRKVLEMRTKQEEIAVET--ELPTELIP 298

[Close]

BLAST of MS010072.1 vs. ExPASy TrEMBL
Match: A0A5D3BL55 (GATA transcription factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00590 PE=3 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 2.7e-97
Identity = 217/330 (65.76%), Postives = 244/330 (73.94%), Query Frame = 0


Query: 1   MIGDSFADEIDCGSFFDHIDDLLDFPTGDLD--DVAFSANADCNSAFPPIWSTHS----- 60
           MI  +  +EIDC +FFD+I+DLL+    DLD  DV F+ N   ++AFPPIWS HS     
Sbjct: 1   MIAANTVEEIDCANFFDNIEDLLE----DLDDHDVDFNTN---SAAFPPIWSQHSDSLPS 60

Query: 61  ------------AADSA---DLSVPYEDIVQLEWLSNFVDDSFSGAGTLTINTSSISPSS 120
                        ADSA   DL VPY+D  Q+EWLSNFVDDSFSGA TLTINTS+ SP  
Sbjct: 61  DAVVDPVLFPVNTADSALSPDLCVPYDD--QMEWLSNFVDDSFSGAETLTINTSNSSP-- 120

Query: 121 SAAPNQFHTSSPVSVLDSSSSSSSDSGDKKALAASK---RGRPRSKRPRPPTFIPRPPQL 180
              P+QFH SSPVSVLDSSSSSSS S D+K    +K   RGR RSKRPRP TFIPRPPQL
Sbjct: 121 ---PSQFHISSPVSVLDSSSSSSSSSFDEKKPLTTKDGRRGRARSKRPRPTTFIPRPPQL 180

Query: 181 VSPATSEAATGKASSDSENYAESCSPSPPSNKNKKIKLSFRRDRNDAFN-QGVRKCLHCE 240
           +SP  S +   K SS+SENYAESCSP P   K KKIKL+FRRD+NDA N QG+RKCLHCE
Sbjct: 181 ISPTNSGS---KVSSESENYAESCSPLPLPKKTKKIKLTFRRDQNDALNPQGMRKCLHCE 240

Query: 241 VTKTPQWRAGPLGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPRLHSNSHKKVIEMRTK 300
           VTKTPQWRAGPLGPKTLCNACGVRYKSGRL+PEYRPAASPTFVP LHSNSHKKV+EMR K
Sbjct: 241 VTKTPQWRAGPLGPKTLCNACGVRYKSGRLYPEYRPAASPTFVPCLHSNSHKKVLEMRIK 300

Query: 301 QDEKAAKSPAEES-PELIPNINSGIALDYV 304
           Q +K  +   EES PELIPN +SGI L Y+
Sbjct: 301 QVKKGVELTGEESPPELIPNTDSGIILGYI 313

[Close]

BLAST of MS010072.1 vs. ExPASy TrEMBL
Match: A0A0A0KDP1 (GATA transcription factor OS=Cucumis sativus OX=3659 GN=Csa_6G405920 PE=3 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 3.9e-96
Identity = 218/330 (66.06%), Postives = 245/330 (74.24%), Query Frame = 0


Query: 1   MIGDSFADEIDCGSFFDHIDDLLDFPTGDLD-DVAFSANADCNSAFPPIWSTHS------ 60
           MIG++ A+EIDCG+FFD+I+DLL+    DLD DV F+ N   ++AFPPIWS HS      
Sbjct: 1   MIGENIAEEIDCGNFFDNIEDLLE----DLDHDVDFNTN---SAAFPPIWSEHSDSLPSD 60

Query: 61  ------------AADSA---DLSVPYEDIVQLEWLSNFVDDSFSGAGTLTINTSSISPSS 120
                       A DSA   DL VPY+D  Q+EWLSNFVDDSFSGA TLTIN S++SP  
Sbjct: 61  PVVDPVLFSVNTAPDSALSPDLCVPYDD--QMEWLSNFVDDSFSGAETLTINASNLSP-- 120

Query: 121 SAAPNQFHTSSPVSVLDSSSSSSSDSGDKKALAA--SKRGRPRSKRPRP-PTFIPRPPQL 180
              P+QFH SSPVSVLDSSSSSSS S +KK L+    +RGR RSKRPRP  TFIPR P+L
Sbjct: 121 ---PSQFHISSPVSVLDSSSSSSS-SDEKKPLSTKDGRRGRARSKRPRPTTTFIPRTPEL 180

Query: 181 VSPATSEAATGKASSDSENYAESCSPSPPSNKNKKIKLSFRRDRNDAFN-QGVRKCLHCE 240
            SP  S     K SS+SENYAESC P P   K KKIKL+FRRD+ND  N QGVRKCLHCE
Sbjct: 181 TSPTNSGI---KVSSESENYAESCPPLPLPKKTKKIKLTFRRDQNDTLNPQGVRKCLHCE 240

Query: 241 VTKTPQWRAGPLGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPRLHSNSHKKVIEMRTK 300
           VTKTPQWRAGPLGPKTLCNACGVRYKSGRL+PEYRPAASPTFVP LHSNSHKKV+EMR K
Sbjct: 241 VTKTPQWRAGPLGPKTLCNACGVRYKSGRLYPEYRPAASPTFVPCLHSNSHKKVLEMRIK 300

Query: 301 QDEKAAKSPAEESP-ELIPNINSGIALDYV 304
           Q EK  +  AEESP ELIPN +SGI L Y+
Sbjct: 301 QVEKGVELRAEESPAELIPNTDSGIILGYI 312

[Close]

BLAST of MS010072.1 vs. ExPASy TrEMBL
Match: A0A6J1G1S3 (GATA transcription factor OS=Cucurbita moschata OX=3662 GN=LOC111449865 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 3.5e-84
Identity = 199/355 (56.06%), Postives = 230/355 (64.79%), Query Frame = 0


Query: 1   MIGDSFADEIDCGSFFDHIDDLLDFPTGDLD-DVAFSANADCNSAFPPIWSTHSAA---- 60
           M+G+SF D++DCGSFFDHIDDLLDFP  D+D  +  +   D  ++FP IWST S A    
Sbjct: 1   MVGNSFVDDLDCGSFFDHIDDLLDFPVEDVDAGLPPAKGGDSGNSFPTIWSTQSEALPGS 60

Query: 61  -----------DSADLSVPYEDIVQLEWLSNFVDDSFSGAGTLTINTSSISPSSSAAPNQ 120
                       SADLSVPYEDIVQLEWLSNFV+DSF G G+L   T S          Q
Sbjct: 61  DSVFSASRNSDLSADLSVPYEDIVQLEWLSNFVEDSFCGGGSLA--TMSKEEPKGLTHTQ 120

Query: 121 FHTSSPVSVLDSSSSSSSDSGDKK------ALAASKRGRPRSKRPRPPTFIPRPP-QLVS 180
           F TSSPVSVL+SSSS SSD    +      A  A +RGR RSKRPRP TF PRPP QL+S
Sbjct: 121 FQTSSPVSVLESSSSCSSDKSLPRSPEPTIATPAHQRGRARSKRPRPATFCPRPPIQLIS 180

Query: 181 PATSEAAT-------------GKASSDSENYAES--CSPSPP------SNKNKKIKLSFR 240
           PA+S + T              K +SDS+N+AES   +  P         KNKKIKLSF 
Sbjct: 181 PASSVSETTHDPHHQVLQVIAPKTTSDSDNFAESRPLNKMPKHGALGMQKKNKKIKLSFS 240

Query: 241 RDRNDAF------NQGVRKCLHCEVTKTPQWRAGPLGPKTLCNACGVRYKSGRLFPEYRP 300
               D        +Q +RKC+HCE+TKTPQWRAGP+GPKTLCNACGVRYKSGRLFPEYRP
Sbjct: 241 LAPLDGAASQNSPSQSMRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRP 300

Query: 301 AASPTFVPRLHSNSHKKVIEMRTKQDEKAAKS--PAEESPELIPNINSGIALDYV 304
           AASPTFVP LHSNSHKKV+EMR K DEK A +       PELIPN NS I++DY+
Sbjct: 301 AASPTFVPSLHSNSHKKVLEMRNKTDEKTAANVITITVQPELIPNTNSAISMDYM 353

[Close]

BLAST of MS010072.1 vs. TAIR 10
Match: AT3G54810.2 (Plant-specific GATA-type zinc finger transcription factor family protein )

HSP 1 Score: 219.2 bits (557), Expect = 4.6e-57
Identity = 149/338 (44.08%), Postives = 198/338 (58.58%), Query Frame = 0


Query: 1   MIGDSFADEIDCGSFFDHIDDLLDFPTGDLDDVAFSANADCNSAFPPIWSTH-----SAA 60
           MIG SF +++DCG+FFD++DDL+DFP GD+ DV F      + +FP IW+TH     +A+
Sbjct: 1   MIGTSFPEDLDCGNFFDNMDDLMDFPGGDI-DVGFGIGD--SDSFPTIWTTHHDTWPAAS 60

Query: 61  D-----------SADLSVPYEDIVQLEWLSNFVDDSFSGAGTLTINTSSISPSSSAAPNQ 120
           D           S +L VP+EDIV++E   +FV+++       + +T++    SS++ +Q
Sbjct: 61  DPLFSSNTNSDSSPELYVPFEDIVKVERPPSFVEETLVEKKEDSFSTNT---DSSSSHSQ 120

Query: 121 FHTSSPVSVLDSSSSSSSDSGDKKALAASKRGRPRSKRPRPPT----------------- 180
           F +SSPVSVL+SSSSSS  +     +   K GRPR+KRPRPP                  
Sbjct: 121 FRSSSPVSVLESSSSSSQTTNTTSLVLPGKHGRPRTKRPRPPVQDKDRVKDNVCGGDSRL 180

Query: 181 FIPRPPQLVSPATSEAATGKASSDSENYAESCSPSPPSNKNKKIKLSFRRDRNDAFNQ-- 240
            I  P Q +S           +   +  A+  S S  S     I L    +  D+++   
Sbjct: 181 IIRIPKQFLSDHNK-----MINKKKKKKAKITSSSSSSG----IDLEVNGNNVDSYSSEQ 240

Query: 241 -GVRKCLHCEVTKTPQWRAGPLGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPRLHSNS 300
             +RKC+HCEVTKTPQWR GP+GPKTLCNACGVRYKSGRLFPEYRPAASPTF P LHSNS
Sbjct: 241 YPLRKCMHCEVTKTPQWRLGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFTPALHSNS 300

Query: 301 HKKVIEMRTKQDEKAAKSPAEESPE-LIPNINSGIALD 302
           HKKV EMR K+    +    E   + LIPN N+ I +D
Sbjct: 301 HKKVAEMRNKRCSDGSYITEENDLQGLIPN-NAYIGVD 322

[Close]

BLAST of MS010072.1 vs. TAIR 10
Match: AT3G54810.1 (Plant-specific GATA-type zinc finger transcription factor family protein )

HSP 1 Score: 219.2 bits (557), Expect = 4.6e-57
Identity = 149/338 (44.08%), Postives = 198/338 (58.58%), Query Frame = 0


Query: 1   MIGDSFADEIDCGSFFDHIDDLLDFPTGDLDDVAFSANADCNSAFPPIWSTH-----SAA 60
           MIG SF +++DCG+FFD++DDL+DFP GD+ DV F      + +FP IW+TH     +A+
Sbjct: 1   MIGTSFPEDLDCGNFFDNMDDLMDFPGGDI-DVGFGIGD--SDSFPTIWTTHHDTWPAAS 60

Query: 61  D-----------SADLSVPYEDIVQLEWLSNFVDDSFSGAGTLTINTSSISPSSSAAPNQ 120
           D           S +L VP+EDIV++E   +FV+++       + +T++    SS++ +Q
Sbjct: 61  DPLFSSNTNSDSSPELYVPFEDIVKVERPPSFVEETLVEKKEDSFSTNT---DSSSSHSQ 120

Query: 121 FHTSSPVSVLDSSSSSSSDSGDKKALAASKRGRPRSKRPRPPT----------------- 180
           F +SSPVSVL+SSSSSS  +     +   K GRPR+KRPRPP                  
Sbjct: 121 FRSSSPVSVLESSSSSSQTTNTTSLVLPGKHGRPRTKRPRPPVQDKDRVKDNVCGGDSRL 180

Query: 181 FIPRPPQLVSPATSEAATGKASSDSENYAESCSPSPPSNKNKKIKLSFRRDRNDAFNQ-- 240
            I  P Q +S           +   +  A+  S S  S     I L    +  D+++   
Sbjct: 181 IIRIPKQFLSDHNK-----MINKKKKKKAKITSSSSSSG----IDLEVNGNNVDSYSSEQ 240

Query: 241 -GVRKCLHCEVTKTPQWRAGPLGPKTLCNACGVRYKSGRLFPEYRPAASPTFVPRLHSNS 300
             +RKC+HCEVTKTPQWR GP+GPKTLCNACGVRYKSGRLFPEYRPAASPTF P LHSNS
Sbjct: 241 YPLRKCMHCEVTKTPQWRLGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFTPALHSNS 300

Query: 301 HKKVIEMRTKQDEKAAKSPAEESPE-LIPNINSGIALD 302
           HKKV EMR K+    +    E   + LIPN N+ I +D
Sbjct: 301 HKKVAEMRNKRCSDGSYITEENDLQGLIPN-NAYIGVD 322

[Close]

BLAST of MS010072.1 vs. TAIR 10
Match: AT1G08010.1 (GATA transcription factor 11 )

HSP 1 Score: 140.6 bits (353), Expect = 2.1e-33
Identity = 112/285 (39.30%), Postives = 148/285 (51.93%), Query Frame = 0


Query: 13  GSFFDHIDDLLDFPTGDLD---------DVAFSANADCNSAFPPIWSTHSAADSADLSVP 72
           G FFD + + LD P  D+D         D            FP + S  ++  S     P
Sbjct: 19  GDFFDDLINHLDVPLDDIDTTNGEGDWVDRFQDLEPPPMDMFPTLPSDLTSCGSGMAKAP 78

Query: 73  YEDIVQLEWLSNFVDDSFSGAGTLTINTSSISPSSSAAPNQFHTSSPVSVLDSS-SSSSS 132
             DI +   +        S A + T++ SS  P    +   F + SPVSVL++S  S S+
Sbjct: 79  RVDIQRN--IPALKQSYSSEALSSTLHQSSAPPEIKVS-KLFQSLSPVSVLENSYGSLST 138

Query: 133 DSGDKKALAASKRGRPRSKRPRPPT-----FIPRPPQLVSPATSEAATGKASSDSENYAE 192
            +   + LA   +G  RSKR RP T       P  P+    +T      +    SE +A+
Sbjct: 139 HNNGSQRLAFPVKGM-RSKRKRPTTLRLSYLFPSEPRKPEKSTPGKPESECYFSSEQHAK 198

Query: 193 SCSPSPPSNKNKKIKLSFRRDRN--DAFNQG--VRKCLHCEVTKTPQWRAGPLGPKTLCN 252
                    K +KI L+ R   +  +A N    VRKC HCE TKTPQWR GP GPKTLCN
Sbjct: 199 ---------KKRKIHLTTRTVSSTLEASNSDGIVRKCTHCETTKTPQWREGPSGPKTLCN 258

Query: 253 ACGVRYKSGRLFPEYRPAASPTFVPRLHSNSHKKVIEMRTKQDEK 279
           ACGVR++SGRL PEYRPA+SPTF+P +HSNSH+K+IEMR K DE+
Sbjct: 259 ACGVRFRSGRLVPEYRPASSPTFIPAVHSNSHRKIIEMRRKDDEQ 290

[Close]

BLAST of MS010072.1 vs. TAIR 10
Match: AT1G08010.2 (GATA transcription factor 11 )

HSP 1 Score: 140.6 bits (353), Expect = 2.1e-33
Identity = 112/285 (39.30%), Postives = 148/285 (51.93%), Query Frame = 0


Query: 13  GSFFDHIDDLLDFPTGDLD---------DVAFSANADCNSAFPPIWSTHSAADSADLSVP 72
           G FFD + + LD P  D+D         D            FP + S  ++  S     P
Sbjct: 19  GDFFDDLINHLDVPLDDIDTTNGEGDWVDRFQDLEPPPMDMFPTLPSDLTSCGSGMAKAP 78

Query: 73  YEDIVQLEWLSNFVDDSFSGAGTLTINTSSISPSSSAAPNQFHTSSPVSVLDSS-SSSSS 132
             DI +   +        S A + T++ SS  P    +   F + SPVSVL++S  S S+
Sbjct: 79  RVDIQRN--IPALKQSYSSEALSSTLHQSSAPPEIKVS-KLFQSLSPVSVLENSYGSLST 138

Query: 133 DSGDKKALAASKRGRPRSKRPRPPT-----FIPRPPQLVSPATSEAATGKASSDSENYAE 192
            +   + LA   +G  RSKR RP T       P  P+    +T      +    SE +A+
Sbjct: 139 HNNGSQRLAFPVKGM-RSKRKRPTTLRLSYLFPSEPRKPEKSTPGKPESECYFSSEQHAK 198

Query: 193 SCSPSPPSNKNKKIKLSFRRDRN--DAFNQG--VRKCLHCEVTKTPQWRAGPLGPKTLCN 252
                    K +KI L+ R   +  +A N    VRKC HCE TKTPQWR GP GPKTLCN
Sbjct: 199 ---------KKRKIHLTTRTVSSTLEASNSDGIVRKCTHCETTKTPQWREGPSGPKTLCN 258

Query: 253 ACGVRYKSGRLFPEYRPAASPTFVPRLHSNSHKKVIEMRTKQDEK 279
           ACGVR++SGRL PEYRPA+SPTF+P +HSNSH+K+IEMR K DE+
Sbjct: 259 ACGVRFRSGRLVPEYRPASSPTFIPAVHSNSHRKIIEMRRKDDEQ 290

[Close]

BLAST of MS010072.1 vs. TAIR 10
Match: AT3G60530.1 (GATA transcription factor 4 )

HSP 1 Score: 139.0 bits (349), Expect = 6.1e-33
Identity = 103/272 (37.87%), Postives = 131/272 (48.16%), Query Frame = 0


Query: 19  IDDLLDFPTGDL-------DDVAFSANADCNSAFPPIWSTHSAAD-----SADLSVPYED 78
           IDDLLDF   ++          A S+ A   + F    ST+++       + DL VP +D
Sbjct: 14  IDDLLDFSNDEIFSSSSTVTSSAASSAASSENPFSFPSSTYTSPTLLTDFTHDLCVPSDD 73

Query: 79  IVQLEWLSNFVDDSFSGAGTLTINTSSISPSSSAAPNQFHTSSPVSVLDSSSSSSSDSGD 138
              LEWLS FVDDSFS      + T ++ P  S                           
Sbjct: 74  AAHLEWLSRFVDDSFSDFPANPL-TMTVRPEISFT------------------------- 133

Query: 139 KKALAASKRGRPRSKRPRPPTFIPRPPQLVSPATSEAATGKASSDSENYAESCSPSPPSN 198
                    G+PRS+R R            +PA S A T    S+SE       P P   
Sbjct: 134 ---------GKPRSRRSR------------APAPSVAGTWAPMSESELCHSVAKPKP--- 193

Query: 199 KNKKIKLSFRRDRNDAFNQGVRKCLHCEVTKTPQWRAGPLGPKTLCNACGVRYKSGRLFP 258
             KK+      +       G R+C HC   KTPQWR GPLGPKTLCNACGVRYKSGRL P
Sbjct: 194 --KKV-----YNAESVTADGARRCTHCASEKTPQWRTGPLGPKTLCNACGVRYKSGRLVP 228

Query: 259 EYRPAASPTFVPRLHSNSHKKVIEMRTKQDEK 279
           EYRPA+SPTFV   HSNSH+KV+E+R +++++
Sbjct: 254 EYRPASSPTFVLTQHSNSHRKVMELRRQKEQQ 228

The following BLAST results are available for this feature:

BLAST of MS010072.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886093.1	3.9e-114	74.45	GATA transcription factor 8-like [Benincasa hispida]	[more]
XP_023514934.1	3.9e-106	71.79	GATA transcription factor 8-like [Cucurbita pepo subsp. pepo]	[more]
XP_022922376.1	1.5e-105	71.47	GATA transcription factor 8-like [Cucurbita moschata]	[more]
KAG6602312.1	4.8e-104	71.07	Auxin response factor 18, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7032992.1	1.2e-102	70.53	GATA transcription factor 8 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of MS010072.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SV30	6.5e-56	44.08	GATA transcription factor 8 OS=Arabidopsis thaliana OX=3702 GN=GATA8 PE=1 SV=1	[more]
Q6DBP8	3.0e-32	39.30	GATA transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=GATA11 PE=2 SV=1	[more]
O49743	8.6e-32	37.87	GATA transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=GATA4 PE=2 SV=1	[more]
O82632	9.5e-31	36.76	GATA transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=GATA9 PE=2 SV=1	[more]
O49741	6.2e-30	36.82	GATA transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=GATA2 PE=2 SV=1	[more]

BLAST of MS010072.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E3Z2	7.2e-106	71.47	GATA transcription factor OS=Cucurbita moschata OX=3662 GN=LOC111430384 PE=3 SV=...	[more]
A0A6J1JQ22	8.2e-102	71.38	GATA transcription factor OS=Cucurbita maxima OX=3661 GN=LOC111487284 PE=3 SV=1	[more]
A0A5D3BL55	2.7e-97	65.76	GATA transcription factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A0A0KDP1	3.9e-96	66.06	GATA transcription factor OS=Cucumis sativus OX=3659 GN=Csa_6G405920 PE=3 SV=1	[more]
A0A6J1G1S3	3.5e-84	56.06	GATA transcription factor OS=Cucurbita moschata OX=3662 GN=LOC111449865 PE=3 SV=...	[more]

BLAST of MS010072.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G54810.2	4.6e-57	44.08	Plant-specific GATA-type zinc finger transcription factor family protein	[more]
AT3G54810.1	4.6e-57	44.08	Plant-specific GATA-type zinc finger transcription factor family protein	[more]
AT1G08010.1	2.1e-33	39.30	GATA transcription factor 11	[more]
AT1G08010.2	2.1e-33	39.30	GATA transcription factor 11	[more]
AT3G60530.1	6.1e-33	37.87	GATA transcription factor 4	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000679	Zinc finger, GATA-type	SMART	SM00401	GATA_3	coord: 204..254 e-value: 1.2E-15 score: 68.0
IPR000679	Zinc finger, GATA-type	PFAM	PF00320	GATA	coord: 210..243 e-value: 6.2E-16 score: 57.7
IPR000679	Zinc finger, GATA-type	PROSITE	PS00344	GATA_ZN_FINGER_1	coord: 210..235
IPR000679	Zinc finger, GATA-type	PROSITE	PS50114	GATA_ZN_FINGER_2	coord: 204..240 score: 11.384727
IPR000679	Zinc finger, GATA-type	CDD	cd00202	ZnF_GATA	coord: 209..266 e-value: 2.87006E-15 score: 67.0126
IPR016679	Transcription factor, GATA, plant	PIRSF	PIRSF016992	Txn_fac_GATA_plant	coord: 1..296 e-value: 1.4E-69 score: 232.9
IPR013088	Zinc finger, NHR/GATA-type	GENE3D	3.30.50.10		coord: 205..286 e-value: 4.6E-15 score: 57.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..191
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..189
None	No IPR available	PANTHER	PTHR45658	GATA TRANSCRIPTION FACTOR	coord: 1..302
None	No IPR available	PANTHER	PTHR45658:SF51	GATA TRANSCRIPTION FACTOR 8	coord: 1..302
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 208..267

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS010072	MS010072	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS010072.1-cds	MS010072.1-cds-scaffold779:376885..377604	CDS
MS010072.1-cds	MS010072.1-cds-scaffold779:378015..378203	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS010072.1	MS010072.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding