MS009985.1 (mRNA) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GTTTGGGTTCCTCCTCCGGCTGGCTTGCTTAAGGTTAATACTGATGCTGCTTTAGATTTCGAGCGATCTGTGCCTGGTTTGGGTGTAGTTATTCGAGATTGTAATGGGCATGTGATGCTTTCGGCTTCTTCACAAGTAGCACATATGGTAGGTGTTGACCTGGCGGAGGCTATGTCAGTGAACTTTGGAATTCGGCTATCTCAGGAGATGGCTTTGTTTCCGTGTGTTCTGGAAATGGATTCATACTGTATC GTTTGGGTTCCTCCTCCGGCTGGCTTGCTTAAGGTTAATACTGATGCTGCTTTAGATTTCGAGCGATCTGTGCCTGGTTTGGGTGTAGTTATTCGAGATTGTAATGGGCATGTGATGCTTTCGGCTTCTTCACAAGTAGCACATATGGTAGGTGTTGACCTGGCGGAGGCTATGTCAGTGAACTTTGGAATTCGGCTATCTCAGGAGATGGCTTTGTTTCCGTGTGTTCTGGAAATGGATTCATACTGTATC GTTTGGGTTCCTCCTCCGGCTGGCTTGCTTAAGGTTAATACTGATGCTGCTTTAGATTTCGAGCGATCTGTGCCTGGTTTGGGTGTAGTTATTCGAGATTGTAATGGGCATGTGATGCTTTCGGCTTCTTCACAAGTAGCACATATGGTAGGTGTTGACCTGGCGGAGGCTATGTCAGTGAACTTTGGAATTCGGCTATCTCAGGAGATGGCTTTGTTTCCGTGTGTTCTGGAAATGGATTCATACTGTATC VWVPPPAGLLKVNTDAALDFERSVPGLGVVIRDCNGHVMLSASSQVAHMVGVDLAEAMSVNFGIRLSQEMALFPCVLEMDSYCI Homology
BLAST of MS009985.1 vs. NCBI nr
Match: XP_023882817.1 (uncharacterized protein LOC111995143 [Quercus suber]) HSP 1 Score: 77.4 bits (189), Expect = 6.5e-11 Identity = 36/83 (43.37%), Postives = 54/83 (65.06%), Query Frame = 0
BLAST of MS009985.1 vs. NCBI nr
Match: TXG69190.1 (hypothetical protein EZV62_004125 [Acer yangbiense]) HSP 1 Score: 73.6 bits (179), Expect = 9.4e-10 Identity = 37/83 (44.58%), Postives = 47/83 (56.63%), Query Frame = 0
BLAST of MS009985.1 vs. NCBI nr
Match: XP_024041962.1 (uncharacterized protein LOC112099092 [Citrus clementina]) HSP 1 Score: 72.8 bits (177), Expect = 1.6e-09 Identity = 35/79 (44.30%), Postives = 52/79 (65.82%), Query Frame = 0
BLAST of MS009985.1 vs. NCBI nr
Match: XP_015389224.1 (uncharacterized protein LOC107178480 [Citrus sinensis]) HSP 1 Score: 72.8 bits (177), Expect = 1.6e-09 Identity = 35/79 (44.30%), Postives = 52/79 (65.82%), Query Frame = 0
BLAST of MS009985.1 vs. NCBI nr
Match: XP_023904880.1 (uncharacterized protein LOC112016554 [Quercus suber]) HSP 1 Score: 72.0 bits (175), Expect = 2.7e-09 Identity = 35/80 (43.75%), Postives = 51/80 (63.75%), Query Frame = 0
BLAST of MS009985.1 vs. ExPASy TrEMBL
Match: A0A1S8ACU2 (Ribonuclease H-like superfamily protein OS=Citrus limon OX=2708 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 4.5e-10 Identity = 35/79 (44.30%), Postives = 53/79 (67.09%), Query Frame = 0
BLAST of MS009985.1 vs. ExPASy TrEMBL
Match: A0A5C7IIT4 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_004125 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 4.5e-10 Identity = 37/83 (44.58%), Postives = 47/83 (56.63%), Query Frame = 0
BLAST of MS009985.1 vs. ExPASy TrEMBL
Match: B9SH25 (RNase H domain-containing protein OS=Ricinus communis OX=3988 GN=RCOM_0581330 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 3.8e-09 Identity = 33/80 (41.25%), Postives = 53/80 (66.25%), Query Frame = 0
BLAST of MS009985.1 vs. ExPASy TrEMBL
Match: A0A1S8ABJ9 (Ribonuclease H-like superfamily protein (Fragment) OS=Citrus limon OX=2708 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 3.8e-09 Identity = 35/81 (43.21%), Postives = 54/81 (66.67%), Query Frame = 0
BLAST of MS009985.1 vs. ExPASy TrEMBL
Match: A0A5C7GQX3 (RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_026488 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 3.8e-09 Identity = 35/83 (42.17%), Postives = 52/83 (62.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|