MS009428.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS009428.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	WD repeat-containing protein 43
Location	scaffold813: 1225725 .. 1228946 (-)
Sequence length	1869
RNA-Seq Expression	MS009428.1
Synteny	MS009428.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAGGAAATGCTGAAATCGCCGCCCATCACAGCTTTCACACCCGACGGCGACTATCTGGCTATCTTGTCCCCCAACGAAACTGTCAAGGCAAGCTCCTTCACTCTGTGTTCTTTATGTGGGGCTCCTTGTGGTTGCAAATGGAAGTTTTTTGCGATGCTCGTGGATATATTGATGTTATTTACTTTACTAGTTTCATGGGGACGCTTTTTATGTATCTGTTAGATTTGGAGTGCTCGTGATGGAAGTTTACTGGCAGAGTGGAAGGATTCTGAGGGAAAAACCGATGTGGGTTATTCCTGTTTGGCCTGCTGTTTTGTGCGGAAAAAGGTGAGGAAAGTTCATTTTTAAGTTTAATTCTTTGGTATCGTATTGTATGTGTTGGGAGTCTGATATATGTAATCTTTGGCTCAAATTTTCAGCATCAAAAGAAAAAGAGTTCTTGTGTAATTGCCATCGGTACCGATAATGGGGATGTGTTGGCTGTAAATGCTTCAAGTGGTGAGACGAAGTGGGTATCTGCAGGTTGCCATATTGGGTATGTAATCAATTCTGCTGACTCTTCATAACTTGGTAATTTAAAGAATGTCGAATGATCGGATGGAACTCAGGCTCGAGGGCACAAATTTTATGAAATTTACTGATCGAATATTGACCATGTTAGTTGCTTCACATTGATGCATTCATTGTGGCAATACGTTTAGATGATAAAAAATGATAAGAGAATAAAATGTTATAATGATTAATAGGATGGGGGCTTCCCTTGTTCACACACCTTAAATATATAAATTTCATGATCGAGACATCTAAAAGATAATATTTATTTCAGTCTTTTATGATAGTGCAGCTATCTCTGAAGTAAGTTCATTTTACACATGAATTATGGTTCTACTAATCTACACTGAAATCTGCTTAGTTTGTTATTTTATTTGTTATGGCGAATGAAGTATTTTGTTTACCCTGATTTGTGAAGTGGAGTTATTGGCCTTTCTTTTGCGAACAAAGGCCGTAGACTGCGGACGGTTGGAAGTAATGGAATGGCATCTGAGATGGACACTGAAACAGGAAACATTATCAAGGAGTTCAAAGCTTCGAAAAAATCAATCTCTTCTTCAGCCTTTTCACCTGGTTAGTTACTTATCCATGCTCTGCTAAGTGGGCAATGGCAGCACCTTTACTGACTTAACGAGTTACTATTTTGCCAGATGAGAAGTACTTAGCTGTTGCTGGCAAAAAGTTGAGGATTTTAAGCACAGATAACGGGGATGAGCTTATGGTGCACTCTGATAAATTGGTGAGCTACCCAAATTTCTTACTTCTGAATGCGTTCAATTCACTGAGTATACTCTACCATTCAAAATTTAGGGTCCTGTGAAGCTTGTTTCTATATCTGATGATGCCAAAGCAATAATTACATCAGAATTTGGAGCCAAACATCTTCAAGTGTGGTGGTGTGACATGAGTGCAAGAAAACTTAGTAGAGGTCCTGTTCTTTCCATGAAACATCCTCCATTTGTTTCTGAGTGCAAAAATATTAGCAATGAAGAAGATAGCATAGTTGTCTTGTCAGTATCAGTATCGGGTGTAGCTTATGTATGGAGATTAAAGATTCTATCAGAAGACGAGGTTAGTCCAAATAAAGTCACTGTTAAAGCTAATGACGCCCAATCAGCTGAGGAAAACCATGGAAGTGCTAAGAAGAATCGAATTTCTGTCATCGCTTCCAGAATAGATGGTTCAGGAGACAATGAAGTGTCAGTTCTTGTTACTCATGGCTCCATGGACCAACCGCAGCTTAGTCTTTTTAATATTGGTTATTCCGTGAAGGAAGACCTAAATACTGCGCATGAGAAGAAAACCCTCCAACAAAATGATGATTTTTCTGGACAAGGTTTGACAAAATTATCATGTTTGCCATTCTTTTCCTTATTTTCCATGCGTCCCCATTCTCATACAGGTAAGTACAATGCTTATACTTTGTCACAGGTCCCCATGAGATCGAACAAGCAGTTACTACGCCTAAAAGTAAGAAAAGCAAAAAGAAAAGAGCAGCATCTGATATTGATAGTCTGACAGCTGGAGATGTCAGCGATGTTGGTAAGGATCGTCTTTGCGCTATTGCTTGTGGCAGTTGAATTGTCATTGAGCTACATTAATTTGATGTCTATCTGGGAATGTAGGCAATGGAGACGCATCTGATGTTTTATTCAATGATGATATAAATGAGCCAACCATGGGAGAGAAACTTGCAAGTTTGAATCTGCTAGACCAGGACGAAGATGAGAGCCATGAACAAGAAGAACCTTCCGTCCCTGCAATACCACCAAGTGCAGACTCTGTTCAGGTTTTGCTCAAGCAAGCACTACATGCTGACGATCGCGCCCTTTTGCTAGAATGCTTATATACCAAGGATGATAAGGTATTCATTTTGTAAACAATCCCACAACGTCTACTTTGCCCACTAACCATTTTGATGCTGATACATCTCATATATTGTCTGTTATTATAAGGTTATCTCAAAATCAATAGCACAATTGAATTCATCTGATGTTCTTAAGCTTTTGCACTCTCTGATATCCATTATCCAGTCAAGGTAATCTCACTTAATCTGGCCTTTTGTTATCTTTAAACTGTGTCCTCAAAATCAAGAATATCATATAAAAAACTTCATGTCTTATTTTCAGAGGGGCAATTCTTGTATGTGCCCTCCCTTGGCTGAGAGGTTTACTTCTCCAACATGCAAGTAGAATAATGTCCCAAGAATCTTCTCTGCTCGCCCTGAATTCTCTATATCAGGTTAGCAATGGTTTGTTTTATGAGATTGGTTAAATCATCATCAGCTTAGATTAATACAAATATAATTTCAATGTATGTGTCAGCTCATTGAGTCTAGAATTTCAACTTTCCAATCCGCTGTTCTGCTATCAAGTAGCTTGGACTTCCTTTACACGGGGGTAAGTGCATTCTTCTCCCTCAACTCAACATTGCTTCATTGGAATTTCAGAGACCTTTTTCGAGCTGAATGAGTTTTTTTGGCAGGTTCTTGATGAGGAGGTGGATGACAATGATGCCATTGTGCCGATTATTTACGAGGACGAGGACGACAGCGATGATCAGGAATCGGGAGATGAAATGGAAACTGATGAAGATGAAGAAGAAGAAGAAAGAGAAGAAGCTTTTGGTGATCTTAGTGCTGGTGAAGTTGATGACATGAGTGAG

mRNA sequence

ATGAAGAAGGAAATGCTGAAATCGCCGCCCATCACAGCTTTCACACCCGACGGCGACTATCTGGCTATCTTGTCCCCCAACGAAACTATTTGGAGTGCTCGTGATGGAAGTTTACTGGCAGAGTGGAAGGATTCTGAGGGAAAAACCGATGTGGGTTATTCCTGTTTGGCCTGCTGTTTTGTGCGGAAAAAGAAAAAGAGTTCTTGTGTAATTGCCATCGGTACCGATAATGGGGATGTGTTGGCTGTAAATGCTTCAAGTGGTGAGACGAAGTGGGTATCTGCAGGTTGCCATATTGGTGGAGTTATTGGCCTTTCTTTTGCGAACAAAGGCCGTAGACTGCGGACGGTTGGAAGTAATGGAATGGCATCTGAGATGGACACTGAAACAGGAAACATTATCAAGGAGTTCAAAGCTTCGAAAAAATCAATCTCTTCTTCAGCCTTTTCACCTGATGAGAAGTACTTAGCTGTTGCTGGCAAAAAGTTGAGGATTTTAAGCACAGATAACGGGGATGAGCTTATGGTGCACTCTGATAAATTGGGTCCTGTGAAGCTTGTTTCTATATCTGATGATGCCAAAGCAATAATTACATCAGAATTTGGAGCCAAACATCTTCAAGTGTGGTGGTGTGACATGAGTGCAAGAAAACTTAGTAGAGGTCCTGTTCTTTCCATGAAACATCCTCCATTTGTTTCTGAGTGCAAAAATATTAGCAATGAAGAAGATAGCATAGTTGTCTTGTCAGTATCAGTATCGGGTGTAGCTTATGTATGGAGATTAAAGATTCTATCAGAAGACGAGGTTAGTCCAAATAAAGTCACTGTTAAAGCTAATGACGCCCAATCAGCTGAGGAAAACCATGGAAGTGCTAAGAAGAATCGAATTTCTGTCATCGCTTCCAGAATAGATGGTTCAGGAGACAATGAAGTGTCAGTTCTTGTTACTCATGGCTCCATGGACCAACCGCAGCTTAGTCTTTTTAATATTGGTTATTCCGTGAAGGAAGACCTAAATACTGCGCATGAGAAGAAAACCCTCCAACAAAATGATGATTTTTCTGGACAAGGTCCCCATGAGATCGAACAAGCAGTTACTACGCCTAAAAGTAAGAAAAGCAAAAAGAAAAGAGCAGCATCTGATATTGATAGTCTGACAGCTGGAGATGTCAGCGATGTTGGCAATGGAGACGCATCTGATGTTTTATTCAATGATGATATAAATGAGCCAACCATGGGAGAGAAACTTGCAAGTTTGAATCTGCTAGACCAGGACGAAGATGAGAGCCATGAACAAGAAGAACCTTCCGTCCCTGCAATACCACCAAGTGCAGACTCTGTTCAGGTTTTGCTCAAGCAAGCACTACATGCTGACGATCGCGCCCTTTTGCTAGAATGCTTATATACCAAGGATGATAAGGTTATCTCAAAATCAATAGCACAATTGAATTCATCTGATGTTCTTAAGCTTTTGCACTCTCTGATATCCATTATCCAGTCAAGAGGGGCAATTCTTGTATGTGCCCTCCCTTGGCTGAGAGGTTTACTTCTCCAACATGCAAGTAGAATAATGTCCCAAGAATCTTCTCTGCTCGCCCTGAATTCTCTATATCAGCTCATTGAGTCTAGAATTTCAACTTTCCAATCCGCTGTTCTGCTATCAAGTAGCTTGGACTTCCTTTACACGGGGGTTCTTGATGAGGAGGTGGATGACAATGATGCCATTGTGCCGATTATTTACGAGGACGAGGACGACAGCGATGATCAGGAATCGGGAGATGAAATGGAAACTGATGAAGATGAAGAAGAAGAAGAAAGAGAAGAAGCTTTTGGTGATCTTAGTGCTGGTGAAGTTGATGACATGAGTGAG

Coding sequence (CDS)

ATGAAGAAGGAAATGCTGAAATCGCCGCCCATCACAGCTTTCACACCCGACGGCGACTATCTGGCTATCTTGTCCCCCAACGAAACTATTTGGAGTGCTCGTGATGGAAGTTTACTGGCAGAGTGGAAGGATTCTGAGGGAAAAACCGATGTGGGTTATTCCTGTTTGGCCTGCTGTTTTGTGCGGAAAAAGAAAAAGAGTTCTTGTGTAATTGCCATCGGTACCGATAATGGGGATGTGTTGGCTGTAAATGCTTCAAGTGGTGAGACGAAGTGGGTATCTGCAGGTTGCCATATTGGTGGAGTTATTGGCCTTTCTTTTGCGAACAAAGGCCGTAGACTGCGGACGGTTGGAAGTAATGGAATGGCATCTGAGATGGACACTGAAACAGGAAACATTATCAAGGAGTTCAAAGCTTCGAAAAAATCAATCTCTTCTTCAGCCTTTTCACCTGATGAGAAGTACTTAGCTGTTGCTGGCAAAAAGTTGAGGATTTTAAGCACAGATAACGGGGATGAGCTTATGGTGCACTCTGATAAATTGGGTCCTGTGAAGCTTGTTTCTATATCTGATGATGCCAAAGCAATAATTACATCAGAATTTGGAGCCAAACATCTTCAAGTGTGGTGGTGTGACATGAGTGCAAGAAAACTTAGTAGAGGTCCTGTTCTTTCCATGAAACATCCTCCATTTGTTTCTGAGTGCAAAAATATTAGCAATGAAGAAGATAGCATAGTTGTCTTGTCAGTATCAGTATCGGGTGTAGCTTATGTATGGAGATTAAAGATTCTATCAGAAGACGAGGTTAGTCCAAATAAAGTCACTGTTAAAGCTAATGACGCCCAATCAGCTGAGGAAAACCATGGAAGTGCTAAGAAGAATCGAATTTCTGTCATCGCTTCCAGAATAGATGGTTCAGGAGACAATGAAGTGTCAGTTCTTGTTACTCATGGCTCCATGGACCAACCGCAGCTTAGTCTTTTTAATATTGGTTATTCCGTGAAGGAAGACCTAAATACTGCGCATGAGAAGAAAACCCTCCAACAAAATGATGATTTTTCTGGACAAGGTCCCCATGAGATCGAACAAGCAGTTACTACGCCTAAAAGTAAGAAAAGCAAAAAGAAAAGAGCAGCATCTGATATTGATAGTCTGACAGCTGGAGATGTCAGCGATGTTGGCAATGGAGACGCATCTGATGTTTTATTCAATGATGATATAAATGAGCCAACCATGGGAGAGAAACTTGCAAGTTTGAATCTGCTAGACCAGGACGAAGATGAGAGCCATGAACAAGAAGAACCTTCCGTCCCTGCAATACCACCAAGTGCAGACTCTGTTCAGGTTTTGCTCAAGCAAGCACTACATGCTGACGATCGCGCCCTTTTGCTAGAATGCTTATATACCAAGGATGATAAGGTTATCTCAAAATCAATAGCACAATTGAATTCATCTGATGTTCTTAAGCTTTTGCACTCTCTGATATCCATTATCCAGTCAAGAGGGGCAATTCTTGTATGTGCCCTCCCTTGGCTGAGAGGTTTACTTCTCCAACATGCAAGTAGAATAATGTCCCAAGAATCTTCTCTGCTCGCCCTGAATTCTCTATATCAGCTCATTGAGTCTAGAATTTCAACTTTCCAATCCGCTGTTCTGCTATCAAGTAGCTTGGACTTCCTTTACACGGGGGTTCTTGATGAGGAGGTGGATGACAATGATGCCATTGTGCCGATTATTTACGAGGACGAGGACGACAGCGATGATCAGGAATCGGGAGATGAAATGGAAACTGATGAAGATGAAGAAGAAGAAGAAAGAGAAGAAGCTTTTGGTGATCTTAGTGCTGGTGAAGTTGATGACATGAGTGAG

Protein sequence

MKKEMLKSPPITAFTPDGDYLAILSPNETIWSARDGSLLAEWKDSEGKTDVGYSCLACCFVRKKKKSSCVIAIGTDNGDVLAVNASSGETKWVSAGCHIGGVIGLSFANKGRRLRTVGSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELMVHSDKLGPVKLVSISDDAKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPPFVSECKNISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHGSAKKNRISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSGQGPHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVSDVGNGDASDVLFNDDINEPTMGEKLASLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVPIIYEDEDDSDDQESGDEMETDEDEEEEEREEAFGDLSAGEVDDMSE

Homology

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BLAST of MS009428.1 vs. NCBI nr
Match: XP_022150139.1 (WD repeat-containing protein 43 [Momordica charantia])

HSP 1 Score: 1160.6 bits (3001), Expect = 0.0e+00
Identity = 621/628 (98.89%), Postives = 622/628 (99.04%), Query Frame = 0


Query: 1   MKKEMLKSPPITAFTPDGDYLAILSPNET--IWSARDGSLLAEWKDSEGKTDVGYSCLAC 60
           MKKEMLKSPPITAFTPDGDYLAILSPNET  IWSARDGSLLAEWKDSEGKTDVGYSCLAC
Sbjct: 1   MKKEMLKSPPITAFTPDGDYLAILSPNETVKIWSARDGSLLAEWKDSEGKTDVGYSCLAC 60

Query: 61  CFVRK---KKKSSCVIAIGTDNGDVLAVNASSGETKWVSAGCHIGGVIGLSFANKGRRLR 120
           CFVRK   KKKSSCVIAIGTDNGDVLAVNASSGETKWVSAGCHIGGVIGLSFANKGRRLR
Sbjct: 61  CFVRKKHQKKKSSCVIAIGTDNGDVLAVNASSGETKWVSAGCHIGGVIGLSFANKGRRLR 120

Query: 121 TVGSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELM 180
           TVGSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELM
Sbjct: 121 TVGSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELM 180

Query: 181 VHSDKLGPVKLVSISDDAKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPPFVSEC 240
           VHSDKLGPVKLVSISDDAKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPPFVSEC
Sbjct: 181 VHSDKLGPVKLVSISDDAKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPPFVSEC 240

Query: 241 KNISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHGSAKKNR 300
           KNISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHGSAKKNR
Sbjct: 241 KNISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHGSAKKNR 300

Query: 301 ISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSG 360
           ISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSG
Sbjct: 301 ISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSG 360

Query: 361 QGPHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVSDVGNGDASDVLFNDDINEPTMGEK 420
           QGPHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVS VGNGDASDVLFNDDINEPTMGEK
Sbjct: 361 QGPHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVSGVGNGDASDVLFNDDINEPTMGEK 420

Query: 421 LASLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVI 480
           LASLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVI
Sbjct: 421 LASLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVI 480

Query: 481 SKSIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNS 540
           SKSIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNS
Sbjct: 481 SKSIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNS 540

Query: 541 LYQLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVPIIYEDEDDSDDQESGDEM 600
           LYQLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVPIIYEDEDDSDDQESGDEM
Sbjct: 541 LYQLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVPIIYEDEDDSDDQESGDEM 600

Query: 601 ETDEDEEEEEREEAFGDLSAGEVDDMSE 624
           ETDEDEEEEEREEAFGDLSAGEVDD+SE
Sbjct: 601 ETDEDEEEEEREEAFGDLSAGEVDDISE 628

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BLAST of MS009428.1 vs. NCBI nr
Match: XP_038899613.1 (WD repeat-containing protein 43 [Benincasa hispida])

HSP 1 Score: 1001.9 bits (2589), Expect = 2.4e-288
Identity = 537/627 (85.65%), Postives = 580/627 (92.50%), Query Frame = 0


Query: 1   MKKEMLKSPPITAFTPDGDYLAILSPNET--IWSARDGSLLAEWKDSEGKTDVGYSCLAC 60
           MKKE+LKSPPITAFTPDGDYLAILS N T  IWS RDGSLLAEWKD +GK DVGYSC+AC
Sbjct: 1   MKKEILKSPPITAFTPDGDYLAILSSNGTLKIWSTRDGSLLAEWKDPDGKNDVGYSCMAC 60

Query: 61  CFVRKKKKSS-CVIAIGTDNGDVLAVNASSGETKWVSAGCHIGGVIGLSFANKGRRLRTV 120
           CF  KK+K+S CV+A+GT++GDVLAVNAS+GE KWVSAGCH+GGVIGLSFANKGRRL  V
Sbjct: 61  CFQGKKRKNSYCVVAVGTNSGDVLAVNASNGERKWVSAGCHLGGVIGLSFANKGRRLHAV 120

Query: 121 GSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELMVH 180
           GSNG  SEMDTETGNIIKEFKASKKSISSS+FS DEKYLAVAGKKL+ILS D+GDELMVH
Sbjct: 121 GSNGKVSEMDTETGNIIKEFKASKKSISSSSFSLDEKYLAVAGKKLKILSKDDGDELMVH 180

Query: 181 SDKLGPVKLVSISDDAKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPPFVSECKN 240
            DKLGPVKLVS+SDDAK IITSE GAKHLQVWWCDMSA KLSRGPVLSMKHPPFVSEC+N
Sbjct: 181 PDKLGPVKLVSLSDDAKTIITSELGAKHLQVWWCDMSAGKLSRGPVLSMKHPPFVSECRN 240

Query: 241 ISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHGSAKKNRIS 300
           +SN+ED++VVLSVSVSGVAY+W+LKILSEDEVSP KV+VKAND QSAEENHGSAKKNR+S
Sbjct: 241 VSNQEDNVVVLSVSVSGVAYLWKLKILSEDEVSPTKVSVKANDNQSAEENHGSAKKNRVS 300

Query: 301 VIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSGQG 360
           VIASRI+G GDNEVSVLVTHGSMD PQ SLF+IGYSVKED+NTA   KTLQQNDD S QG
Sbjct: 301 VIASRINGVGDNEVSVLVTHGSMDLPQHSLFSIGYSVKEDVNTARGNKTLQQNDDCSEQG 360

Query: 361 PHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVSDVGNGDASDVLFNDDINEPTMGEKLA 420
           PHE+EQ V TPKSKK KKKRAASD+DSLT GD+SDVGNGDASDV+FNDD+NEP+MGEKLA
Sbjct: 361 PHEVEQEVVTPKSKKGKKKRAASDLDSLTTGDISDVGNGDASDVIFNDDLNEPSMGEKLA 420

Query: 421 SLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISK 480
           SLNL+DQ+EDE  E +EPSVPAIPPSADSVQVLLKQALHA+DR LLLECLYTKDDKVISK
Sbjct: 421 SLNLVDQNEDEGRE-KEPSVPAIPPSADSVQVLLKQALHAEDRVLLLECLYTKDDKVISK 480

Query: 481 SIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLY 540
           SIAQLNSSDVLKLLHSLIS IQSRGAILVC LPWLRGLLLQHAS+IMSQESSLLALNSLY
Sbjct: 481 SIAQLNSSDVLKLLHSLISFIQSRGAILVCVLPWLRGLLLQHASKIMSQESSLLALNSLY 540

Query: 541 QLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVPIIYEDEDDSDDQESGDEMET 600
           QLIESRISTFQSA+LLSSSLDFLY+GVLDEEVD+NDAIVPIIYE EDDSDD+ESGDEMET
Sbjct: 541 QLIESRISTFQSALLLSSSLDFLYSGVLDEEVDENDAIVPIIYE-EDDSDDKESGDEMET 600

Query: 601 DEDEEEEEREEAFGDLSAGEV-DDMSE 624
           DEDEE +E  EAF DLSAGEV DDMSE
Sbjct: 601 DEDEERDE-VEAFDDLSAGEVDDDMSE 624

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BLAST of MS009428.1 vs. NCBI nr
Match: XP_008461080.1 (PREDICTED: WD repeat-containing protein 43 [Cucumis melo])

HSP 1 Score: 973.4 bits (2515), Expect = 9.3e-280
Identity = 525/627 (83.73%), Postives = 569/627 (90.75%), Query Frame = 0


Query: 1   MKKEMLKSPPITAFTPDGDYLAILSPNET--IWSARDGSLLAEWKDSEGKTDVGYSCLAC 60
           MKKE+LKSPPITAFTPDGDYLAI S N T  IWS RDGSLLAEWKD +GK D GYSC+AC
Sbjct: 1   MKKEILKSPPITAFTPDGDYLAIFSSNGTLKIWSTRDGSLLAEWKDLDGKDDFGYSCMAC 60

Query: 61  CFVRKKKKSS-CVIAIGTDNGDVLAVNASSGETKWVSAGCHIGGVIGLSFANKGRRLRTV 120
           C + KK+KSS C++AIGT+NGDVLAVNAS+GE KWVS GCH GGVIGLSFAN+GRRL TV
Sbjct: 61  CLLGKKRKSSYCLVAIGTNNGDVLAVNASNGEKKWVSTGCHPGGVIGLSFANEGRRLHTV 120

Query: 121 GSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELMVH 180
           GSNGMASEMDTETGNIIKEFKASKKSISSSAFS DEKYLAVAGKKL+ILS D+GDEL+VH
Sbjct: 121 GSNGMASEMDTETGNIIKEFKASKKSISSSAFSLDEKYLAVAGKKLKILSADDGDELIVH 180

Query: 181 SDKLGPVKLVSISDDAKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPPFVSECKN 240
            DKL PVKLVSISDDAK I+TSE GAKHLQVWWCDMSA K SRGPVLSM HPPFVSEC+N
Sbjct: 181 PDKLDPVKLVSISDDAKTILTSELGAKHLQVWWCDMSAGKFSRGPVLSMNHPPFVSECRN 240

Query: 241 ISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHGSAKKNRIS 300
           +SN+EDS+VVLSVSVSG AY+W+LK+LSEDEV P KV+VKAND QSAEENHGSAKKNR+S
Sbjct: 241 VSNQEDSVVVLSVSVSGAAYLWKLKVLSEDEVIPTKVSVKANDNQSAEENHGSAKKNRVS 300

Query: 301 VIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSGQG 360
           V+AS+I   GDNEVSVLVTHGS+D PQ SL +IGY+VKED NTAHE KTLQQND  S QG
Sbjct: 301 VLASKIHRIGDNEVSVLVTHGSVDLPQHSLLDIGYTVKEDANTAHENKTLQQNDGVSEQG 360

Query: 361 PHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVSDVGNGDASDVLFNDDINEPTMGEKLA 420
           PHEIEQ V TPKSKKSKKKRAASD+DS TAGDVSDVGNGDASDV+FNDD+NEP+MGEKLA
Sbjct: 361 PHEIEQ-VITPKSKKSKKKRAASDLDSPTAGDVSDVGNGDASDVVFNDDLNEPSMGEKLA 420

Query: 421 SLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISK 480
           SLNL DQ+ED   EQE+PSVP IPPSADSVQVLLKQALHADD ALLLECLYTKDDKVISK
Sbjct: 421 SLNLADQNEDGGREQEDPSVPVIPPSADSVQVLLKQALHADDHALLLECLYTKDDKVISK 480

Query: 481 SIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLY 540
           SIAQLNSSDVLKLLHS+IS IQSRGAILVCALPWLRGLLLQHAS+IMSQESSLLALNSLY
Sbjct: 481 SIAQLNSSDVLKLLHSVISFIQSRGAILVCALPWLRGLLLQHASKIMSQESSLLALNSLY 540

Query: 541 QLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVPIIYEDEDDSDDQESGDEMET 600
           QLIE+RISTFQSA+LLSSSLDFLYTGVLDEE +DNDAIVPIIYE E+DSD+ E+GDEMET
Sbjct: 541 QLIEARISTFQSALLLSSSLDFLYTGVLDEEENDNDAIVPIIYE-EEDSDENETGDEMET 600

Query: 601 DEDEEEEEREEAFGDLSAGEV-DDMSE 624
           DED+E +E  EAF DLSAGEV DDMSE
Sbjct: 601 DEDDERDE-VEAFDDLSAGEVDDDMSE 624

[Close]

BLAST of MS009428.1 vs. NCBI nr
Match: XP_004136081.1 (WD repeat-containing protein 43 isoform X2 [Cucumis sativus] >KGN45296.1 hypothetical protein Csa_016094 [Cucumis sativus])

HSP 1 Score: 954.1 bits (2465), Expect = 5.8e-274
Identity = 516/627 (82.30%), Postives = 567/627 (90.43%), Query Frame = 0


Query: 1   MKKEMLKSPPITAFTPDGDYLAILSPNET--IWSARDGSLLAEWKDSEGKTDVGYSCLAC 60
           MK E+LKS PI AFTPDGDYLAI+S N T  IWS RDGSLLAEWKD +GK D GYSC+AC
Sbjct: 1   MKMEILKSLPIAAFTPDGDYLAIVSSNGTLKIWSTRDGSLLAEWKDLDGKNDFGYSCMAC 60

Query: 61  CFVRKKKKSS-CVIAIGTDNGDVLAVNASSGETKWVSAGCHIGGVIGLSFANKGRRLRTV 120
           CF+ KK+KSS CV+AIGT++GDVLAVNAS+GE KWVSAGCH GGVIGLSFANKG RLRTV
Sbjct: 61  CFLGKKRKSSYCVVAIGTNSGDVLAVNASNGEKKWVSAGCHPGGVIGLSFANKGCRLRTV 120

Query: 121 GSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELMVH 180
           GSNGMASEMDTETGNIIKEFKASKKSISSSAFS DE+YL VAGKKL+ILSTD+GDEL+VH
Sbjct: 121 GSNGMASEMDTETGNIIKEFKASKKSISSSAFSLDERYLVVAGKKLKILSTDDGDELIVH 180

Query: 181 SDKLGPVKLVSISDDAKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPPFVSECKN 240
            DKLGPVKLVS+SDDAK IITSE GAKHLQVWWC++SA K SRGP+LSMKHPPFVSEC+N
Sbjct: 181 PDKLGPVKLVSVSDDAKTIITSELGAKHLQVWWCNISAGKFSRGPILSMKHPPFVSECRN 240

Query: 241 ISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHGSAKKNRIS 300
           +SN+EDS+VVLSVSVSG AY+W+LK+LSEDEV+P KV+VKAND QSAEENHGSAKKNR S
Sbjct: 241 VSNQEDSVVVLSVSVSGAAYLWKLKVLSEDEVTPTKVSVKANDNQSAEENHGSAKKNRAS 300

Query: 301 VIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSGQG 360
           V+ASRI G GDNEVSVLVTHGS+D PQ +L +IGY+VKED NTAHE KTLQQND  S QG
Sbjct: 301 VLASRIHGIGDNEVSVLVTHGSVDLPQHTLLDIGYTVKEDANTAHENKTLQQNDCVSEQG 360

Query: 361 PHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVSDVGNGDASDVLFNDDINEPTMGEKLA 420
           PHEIEQ V TPKSKKSKKKRAAS++DSLTAGDVSDVGNGD SDVLFNDD+NEP+MGEKLA
Sbjct: 361 PHEIEQ-VITPKSKKSKKKRAASELDSLTAGDVSDVGNGDTSDVLFNDDLNEPSMGEKLA 420

Query: 421 SLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISK 480
           SLNL DQ++D   EQE+PSVP IPPSADSVQVLLKQALHADDRALLLECLYTKD KVISK
Sbjct: 421 SLNLADQNKDGGREQEDPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDVKVISK 480

Query: 481 SIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLY 540
           SIAQLNSSDVL LLH+LIS IQSRGAILVCALPWLR L+LQHAS+IMSQESSLLALNSLY
Sbjct: 481 SIAQLNSSDVLTLLHALISFIQSRGAILVCALPWLRCLILQHASKIMSQESSLLALNSLY 540

Query: 541 QLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVPIIYEDEDDSDDQESGDEMET 600
           QLIESR STFQSA+LLSSSLDFLYT VLD+E +DND IVPIIYE E+DSD+ E+GDEMET
Sbjct: 541 QLIESRTSTFQSALLLSSSLDFLYTEVLDKEENDNDTIVPIIYE-EEDSDENETGDEMET 600

Query: 601 DEDEEEEEREEAFGDLSAGEV-DDMSE 624
           +ED+E +E  EAF DLSAGEV DDMSE
Sbjct: 601 NEDDERDE-VEAFDDLSAGEVDDDMSE 624

[Close]

BLAST of MS009428.1 vs. NCBI nr
Match: XP_031744699.1 (WD repeat-containing protein 43 isoform X1 [Cucumis sativus])

HSP 1 Score: 946.8 bits (2446), Expect = 9.3e-272
Identity = 516/635 (81.26%), Postives = 567/635 (89.29%), Query Frame = 0


Query: 1   MKKEMLKSPPITAFTPDGDYLAILSPNET--IWSARDGSLLAEWKDSEGKTDVGYSCLAC 60
           MK E+LKS PI AFTPDGDYLAI+S N T  IWS RDGSLLAEWKD +GK D GYSC+AC
Sbjct: 1   MKMEILKSLPIAAFTPDGDYLAIVSSNGTLKIWSTRDGSLLAEWKDLDGKNDFGYSCMAC 60

Query: 61  CFVRKKKKSS-CVIAIGTDNGDVLAVNASSGETKWVSAGCHIGGVIGLSFANKGRRLRTV 120
           CF+ KK+KSS CV+AIGT++GDVLAVNAS+GE KWVSAGCH GGVIGLSFANKG RLRTV
Sbjct: 61  CFLGKKRKSSYCVVAIGTNSGDVLAVNASNGEKKWVSAGCHPGGVIGLSFANKGCRLRTV 120

Query: 121 GSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELMVH 180
           GSNGMASEMDTETGNIIKEFKASKKSISSSAFS DE+YL VAGKKL+ILSTD+GDEL+VH
Sbjct: 121 GSNGMASEMDTETGNIIKEFKASKKSISSSAFSLDERYLVVAGKKLKILSTDDGDELIVH 180

Query: 181 SDKLGPVKLVSISDDAKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPPFVSECKN 240
            DKLGPVKLVS+SDDAK IITSE GAKHLQVWWC++SA K SRGP+LSMKHPPFVSEC+N
Sbjct: 181 PDKLGPVKLVSVSDDAKTIITSELGAKHLQVWWCNISAGKFSRGPILSMKHPPFVSECRN 240

Query: 241 ISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHGSAKKNRIS 300
           +SN+EDS+VVLSVSVSG AY+W+LK+LSEDEV+P KV+VKAND QSAEENHGSAKKNR S
Sbjct: 241 VSNQEDSVVVLSVSVSGAAYLWKLKVLSEDEVTPTKVSVKANDNQSAEENHGSAKKNRAS 300

Query: 301 VIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSGQG 360
           V+ASRI G GDNEVSVLVTHGS+D PQ +L +IGY+VKED NTAHE KTLQQND  S QG
Sbjct: 301 VLASRIHGIGDNEVSVLVTHGSVDLPQHTLLDIGYTVKEDANTAHENKTLQQNDCVSEQG 360

Query: 361 PHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVSD--------VGNGDASDVLFNDDINE 420
           PHEIEQ V TPKSKKSKKKRAAS++DSLTAGDVSD        VGNGD SDVLFNDD+NE
Sbjct: 361 PHEIEQ-VITPKSKKSKKKRAASELDSLTAGDVSDVADTISGNVGNGDTSDVLFNDDLNE 420

Query: 421 PTMGEKLASLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYT 480
           P+MGEKLASLNL DQ++D   EQE+PSVP IPPSADSVQVLLKQALHADDRALLLECLYT
Sbjct: 421 PSMGEKLASLNLADQNKDGGREQEDPSVPVIPPSADSVQVLLKQALHADDRALLLECLYT 480

Query: 481 KDDKVISKSIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESS 540
           KD KVISKSIAQLNSSDVL LLH+LIS IQSRGAILVCALPWLR L+LQHAS+IMSQESS
Sbjct: 481 KDVKVISKSIAQLNSSDVLTLLHALISFIQSRGAILVCALPWLRCLILQHASKIMSQESS 540

Query: 541 LLALNSLYQLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVPIIYEDEDDSDDQ 600
           LLALNSLYQLIESR STFQSA+LLSSSLDFLYT VLD+E +DND IVPIIYE E+DSD+ 
Sbjct: 541 LLALNSLYQLIESRTSTFQSALLLSSSLDFLYTEVLDKEENDNDTIVPIIYE-EEDSDEN 600

Query: 601 ESGDEMETDEDEEEEEREEAFGDLSAGEV-DDMSE 624
           E+GDEMET+ED+E +E  EAF DLSAGEV DDMSE
Sbjct: 601 ETGDEMETNEDDERDE-VEAFDDLSAGEVDDDMSE 632

[Close]

BLAST of MS009428.1 vs. ExPASy Swiss-Prot
Match: Q15061 (WD repeat-containing protein 43 OS=Homo sapiens OX=9606 GN=WDR43 PE=1 SV=3)

HSP 1 Score: 65.5 bits (158), Expect = 2.5e-09
Identity = 140/584 (23.97%), Postives = 243/584 (41.61%), Query Frame = 0


Query: 62  RKKKKSSCV--------IAIGTDNGDVLAVNASSGE--TKWVSAGCHIGGVIGLSFANKG 121
           RKK+KS  V        +A+GT  G +L  +   GE  +K +S G H   V  + +    
Sbjct: 80  RKKRKSEAVGMSNQTDLLALGTAVGSILLYSTVKGELHSKLISGG-HDNRVNCIQWHQDS 139

Query: 122 RRLRTVGSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGK--KLRILSTD 181
             L +   +    E + +T  +  ++K    S+SS   SPD K L  AG+  KL +L T 
Sbjct: 140 GCLYSCSDDKHIVEWNVQTCKVKCKWKGDNSSVSSLCISPDGKMLLSAGRTIKLWVLETK 199

Query: 182 ------NGDELMVHSDKLGPVKLVSISDDAKAIITSEF--GAKH---LQVWWCDMSARKL 241
                  G    V S     ++  + S     I    F  GA H   L VW      ++ 
Sbjct: 200 EVYRHFTGHATPVSSLMFTTIRPPNESQPFDGITGLYFLSGAVHDRLLNVWQVRSENKEK 259

Query: 242 SRGPVLSMKHPPFVSECKNISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKA 301
           S     ++   P   +     N+E+ + +  V   G  +++   IL+     P       
Sbjct: 260 SAVMSFTVTDEPVYIDLTLSENKEEPVKLAVVCRDGQVHLFE-HILNGYCKKP-----LT 319

Query: 302 NDAQSAEENHGSAKKNRISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDL 361
           ++        G  KK+    I     G   +++S+L+ +GS  QP +         +  L
Sbjct: 320 SNCTIQIATPGKGKKSTPKPIPILAAGFCSDKMSLLLVYGSWFQPTIE--------RVAL 379

Query: 362 NTAHEKKTLQQNDDFSGQGPHEIEQAVTTPKS--KKSKKKRAASDIDSLTAGDVSDVGNG 421
           N+      L +  D S     ++E A+T  ++    S+ K     I    A         
Sbjct: 380 NSREPHMCLVR--DISNCWAPKVETAITKVRTPVMNSEAKVLVPGIPGHHAAIKPAPPQT 439

Query: 422 DASDVLFNDDINEPTMGEKLASLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALH 481
           +  +       NE ++ E+L ++++      ++H++ +  +       +S  VLL Q L 
Sbjct: 440 EQVESKRKSGGNEVSIEERLGAMDI------DTHKKGKEDL-----QTNSFPVLLTQGLE 499

Query: 482 ADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLL 541
           ++D  +L + L T++  +I K++ ++    ++ LL  L   +Q      V  + WL+ +L
Sbjct: 500 SNDFEMLNKVLQTRNVNLIKKTVLRMPLHTIIPLLQELTKRLQGHPNSAVLMVQWLKCVL 559

Query: 542 LQHASRIMSQESSLLALNSLYQLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIV 601
             HAS + +    +  L +LYQL+ESR+ TFQ    L   L  L T V   E     A  
Sbjct: 560 TVHASYLSTLPDLVPQLGTLYQLMESRVKTFQKLSHLHGKLILLITQVTASE-KTKGATS 619

Query: 602 P-----IIYEDE-------DDSDDQESGDEMETDEDEEEEEREE 609
           P     ++YE+E       D+  D++S D  + DE+E E E++E
Sbjct: 620 PGQKAKLVYEEESSEEESDDEIADKDSEDNWDEDEEESESEKDE 634

[Close]

BLAST of MS009428.1 vs. ExPASy Swiss-Prot
Match: Q6ZQL4 (WD repeat-containing protein 43 OS=Mus musculus OX=10090 GN=Wdr43 PE=1 SV=2)

HSP 1 Score: 58.9 bits (141), Expect = 2.3e-07
Identity = 148/651 (22.73%), Postives = 263/651 (40.40%), Query Frame = 0


Query: 13  AFTPDGD-YLAILSPNE--TIWSARDGSLLAEWKDSEGKTDVGYSCLACC---------F 72
           AF+PD   Y A+ S +    +W   +  L  E+  S   +    +CLA            
Sbjct: 20  AFSPDSQAYFALASSDGQLRVWETANNRLHQEYVPSAHLSGT-CTCLAWAPARLQAKESH 79

Query: 73  VRKKKKSSC--------VIAIGTDNGDVLAVNASSGET-KWVSAGCHIGGVIGLSFANKG 132
            RKK+KS          ++A+GT  G +L  +   GE    +++G H   V  + +    
Sbjct: 80  QRKKRKSEVTGTKDQADLLALGTAVGSILLYSTVRGELHSKLTSGGHENRVNCIQWHQDN 139

Query: 133 RRLRTVGSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNG 192
             L +   +    E  T+T  +  ++K    S+SS   SPD K L  AG+ +++   +  
Sbjct: 140 DCLYSCSDDKYIVEWSTQTCKVKCKWKGDNSSVSSLCISPDGKMLLSAGRTIKLWVLETK 199

Query: 193 D---ELMVHSDKLGPVKLVSI----SDDAKAIITSEF--GAKH---LQVWWCDMSARKLS 252
           +       H+  +  ++  +I    S  +  I    F  GA H   L VW      ++ S
Sbjct: 200 EVYRHFTGHATPVSSLRFTTIRPNESQPSDGITGLYFLSGAVHDRLLNVWQVRSENKEKS 259

Query: 253 RGPVLSMKHPPFVSECKNISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKAN 312
                ++   P   +     N+E+ + +  V   G  +++   IL+     P        
Sbjct: 260 AVMSFTVTDEPVYVDLTLSENKEEPVKLAVVCRDGQVHLFE-HILNGHCKKPLTSNCTIQ 319

Query: 313 DAQSAEENHGSAKKNRISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLN 372
            A   +    + K   I   +  +D     ++S+L+ +G+  QP +         +  LN
Sbjct: 320 IATPGKGKKVTPKPIPILAASFCLD-----KMSLLLVYGNWFQPTIE--------RVALN 379

Query: 373 TAHEKKTLQQNDDFSGQGPHEIEQAVTTPKS--KKSKKKRAASDIDSLTAGDVSDVGNGD 432
           +      L++  D S      +E A+T  K+    S+ K     I    A          
Sbjct: 380 SKDTHICLER--DISNCWAPTVETAITKVKTPVMNSEAKVLVPGIPGHHAPIKLPPAQPK 439

Query: 433 ASDVLFNDDINEPTMGEKLASLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHA 492
            ++        E T+ E+L +++L     D    +++          +S  VLL Q L +
Sbjct: 440 EAENKRKLGSTEATIEERLGAMDL-----DRKGRKDD-------LQTNSFAVLLTQGLES 499

Query: 493 DDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLL 552
           +D  +L + L TK+  +I +++ ++    V+ LL  L   +Q         + WL+ +L 
Sbjct: 500 NDFEILNKVLQTKNVNLIKRTVLRIPLRVVIPLLQELTKRLQGHPNSAALMIQWLKCVLT 559

Query: 553 QHASRIMSQESSLLALNSLYQLIESRISTFQSAVLLSSSLDFLYTGVLDEE----VDDND 612
            HAS + +    +  L +LYQL+ESR+ TFQ    L   L  L T V   E    +    
Sbjct: 560 IHASYLSTLPDLVEQLGTLYQLMESRVKTFQKLSNLHGKLILLVTQVTASEKSKKMTSPG 619

Query: 613 AIVPIIYEDEDDSDDQESGDEM-ETDEDEEEEEREEAFGDLSAGEVDDMSE 624
               ++YE+E  S ++ES DE+ E D D+  +E E+   +   G  +D  E
Sbjct: 620 QKAKLVYEEE--SSEEESDDEVPEKDSDDNWDEDEDKDSEKDEGVDEDNEE 639

[Close]

BLAST of MS009428.1 vs. ExPASy TrEMBL
Match: A0A6J1D938 (WD repeat-containing protein 43 OS=Momordica charantia OX=3673 GN=LOC111018389 PE=4 SV=1)

HSP 1 Score: 1160.6 bits (3001), Expect = 0.0e+00
Identity = 621/628 (98.89%), Postives = 622/628 (99.04%), Query Frame = 0


Query: 1   MKKEMLKSPPITAFTPDGDYLAILSPNET--IWSARDGSLLAEWKDSEGKTDVGYSCLAC 60
           MKKEMLKSPPITAFTPDGDYLAILSPNET  IWSARDGSLLAEWKDSEGKTDVGYSCLAC
Sbjct: 1   MKKEMLKSPPITAFTPDGDYLAILSPNETVKIWSARDGSLLAEWKDSEGKTDVGYSCLAC 60

Query: 61  CFVRK---KKKSSCVIAIGTDNGDVLAVNASSGETKWVSAGCHIGGVIGLSFANKGRRLR 120
           CFVRK   KKKSSCVIAIGTDNGDVLAVNASSGETKWVSAGCHIGGVIGLSFANKGRRLR
Sbjct: 61  CFVRKKHQKKKSSCVIAIGTDNGDVLAVNASSGETKWVSAGCHIGGVIGLSFANKGRRLR 120

Query: 121 TVGSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELM 180
           TVGSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELM
Sbjct: 121 TVGSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELM 180

Query: 181 VHSDKLGPVKLVSISDDAKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPPFVSEC 240
           VHSDKLGPVKLVSISDDAKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPPFVSEC
Sbjct: 181 VHSDKLGPVKLVSISDDAKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPPFVSEC 240

Query: 241 KNISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHGSAKKNR 300
           KNISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHGSAKKNR
Sbjct: 241 KNISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHGSAKKNR 300

Query: 301 ISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSG 360
           ISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSG
Sbjct: 301 ISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSG 360

Query: 361 QGPHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVSDVGNGDASDVLFNDDINEPTMGEK 420
           QGPHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVS VGNGDASDVLFNDDINEPTMGEK
Sbjct: 361 QGPHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVSGVGNGDASDVLFNDDINEPTMGEK 420

Query: 421 LASLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVI 480
           LASLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVI
Sbjct: 421 LASLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVI 480

Query: 481 SKSIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNS 540
           SKSIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNS
Sbjct: 481 SKSIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNS 540

Query: 541 LYQLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVPIIYEDEDDSDDQESGDEM 600
           LYQLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVPIIYEDEDDSDDQESGDEM
Sbjct: 541 LYQLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVPIIYEDEDDSDDQESGDEM 600

Query: 601 ETDEDEEEEEREEAFGDLSAGEVDDMSE 624
           ETDEDEEEEEREEAFGDLSAGEVDD+SE
Sbjct: 601 ETDEDEEEEEREEAFGDLSAGEVDDISE 628

[Close]

BLAST of MS009428.1 vs. ExPASy TrEMBL
Match: A0A1S3CDX9 (WD repeat-containing protein 43 OS=Cucumis melo OX=3656 GN=LOC103499777 PE=4 SV=1)

HSP 1 Score: 973.4 bits (2515), Expect = 4.5e-280
Identity = 525/627 (83.73%), Postives = 569/627 (90.75%), Query Frame = 0


Query: 1   MKKEMLKSPPITAFTPDGDYLAILSPNET--IWSARDGSLLAEWKDSEGKTDVGYSCLAC 60
           MKKE+LKSPPITAFTPDGDYLAI S N T  IWS RDGSLLAEWKD +GK D GYSC+AC
Sbjct: 1   MKKEILKSPPITAFTPDGDYLAIFSSNGTLKIWSTRDGSLLAEWKDLDGKDDFGYSCMAC 60

Query: 61  CFVRKKKKSS-CVIAIGTDNGDVLAVNASSGETKWVSAGCHIGGVIGLSFANKGRRLRTV 120
           C + KK+KSS C++AIGT+NGDVLAVNAS+GE KWVS GCH GGVIGLSFAN+GRRL TV
Sbjct: 61  CLLGKKRKSSYCLVAIGTNNGDVLAVNASNGEKKWVSTGCHPGGVIGLSFANEGRRLHTV 120

Query: 121 GSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELMVH 180
           GSNGMASEMDTETGNIIKEFKASKKSISSSAFS DEKYLAVAGKKL+ILS D+GDEL+VH
Sbjct: 121 GSNGMASEMDTETGNIIKEFKASKKSISSSAFSLDEKYLAVAGKKLKILSADDGDELIVH 180

Query: 181 SDKLGPVKLVSISDDAKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPPFVSECKN 240
            DKL PVKLVSISDDAK I+TSE GAKHLQVWWCDMSA K SRGPVLSM HPPFVSEC+N
Sbjct: 181 PDKLDPVKLVSISDDAKTILTSELGAKHLQVWWCDMSAGKFSRGPVLSMNHPPFVSECRN 240

Query: 241 ISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHGSAKKNRIS 300
           +SN+EDS+VVLSVSVSG AY+W+LK+LSEDEV P KV+VKAND QSAEENHGSAKKNR+S
Sbjct: 241 VSNQEDSVVVLSVSVSGAAYLWKLKVLSEDEVIPTKVSVKANDNQSAEENHGSAKKNRVS 300

Query: 301 VIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSGQG 360
           V+AS+I   GDNEVSVLVTHGS+D PQ SL +IGY+VKED NTAHE KTLQQND  S QG
Sbjct: 301 VLASKIHRIGDNEVSVLVTHGSVDLPQHSLLDIGYTVKEDANTAHENKTLQQNDGVSEQG 360

Query: 361 PHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVSDVGNGDASDVLFNDDINEPTMGEKLA 420
           PHEIEQ V TPKSKKSKKKRAASD+DS TAGDVSDVGNGDASDV+FNDD+NEP+MGEKLA
Sbjct: 361 PHEIEQ-VITPKSKKSKKKRAASDLDSPTAGDVSDVGNGDASDVVFNDDLNEPSMGEKLA 420

Query: 421 SLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISK 480
           SLNL DQ+ED   EQE+PSVP IPPSADSVQVLLKQALHADD ALLLECLYTKDDKVISK
Sbjct: 421 SLNLADQNEDGGREQEDPSVPVIPPSADSVQVLLKQALHADDHALLLECLYTKDDKVISK 480

Query: 481 SIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLY 540
           SIAQLNSSDVLKLLHS+IS IQSRGAILVCALPWLRGLLLQHAS+IMSQESSLLALNSLY
Sbjct: 481 SIAQLNSSDVLKLLHSVISFIQSRGAILVCALPWLRGLLLQHASKIMSQESSLLALNSLY 540

Query: 541 QLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVPIIYEDEDDSDDQESGDEMET 600
           QLIE+RISTFQSA+LLSSSLDFLYTGVLDEE +DNDAIVPIIYE E+DSD+ E+GDEMET
Sbjct: 541 QLIEARISTFQSALLLSSSLDFLYTGVLDEEENDNDAIVPIIYE-EEDSDENETGDEMET 600

Query: 601 DEDEEEEEREEAFGDLSAGEV-DDMSE 624
           DED+E +E  EAF DLSAGEV DDMSE
Sbjct: 601 DEDDERDE-VEAFDDLSAGEVDDDMSE 624

[Close]

BLAST of MS009428.1 vs. ExPASy TrEMBL
Match: A0A0A0KBW9 (Utp12 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G433260 PE=4 SV=1)

HSP 1 Score: 954.1 bits (2465), Expect = 2.8e-274
Identity = 516/627 (82.30%), Postives = 567/627 (90.43%), Query Frame = 0


Query: 1   MKKEMLKSPPITAFTPDGDYLAILSPNET--IWSARDGSLLAEWKDSEGKTDVGYSCLAC 60
           MK E+LKS PI AFTPDGDYLAI+S N T  IWS RDGSLLAEWKD +GK D GYSC+AC
Sbjct: 1   MKMEILKSLPIAAFTPDGDYLAIVSSNGTLKIWSTRDGSLLAEWKDLDGKNDFGYSCMAC 60

Query: 61  CFVRKKKKSS-CVIAIGTDNGDVLAVNASSGETKWVSAGCHIGGVIGLSFANKGRRLRTV 120
           CF+ KK+KSS CV+AIGT++GDVLAVNAS+GE KWVSAGCH GGVIGLSFANKG RLRTV
Sbjct: 61  CFLGKKRKSSYCVVAIGTNSGDVLAVNASNGEKKWVSAGCHPGGVIGLSFANKGCRLRTV 120

Query: 121 GSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELMVH 180
           GSNGMASEMDTETGNIIKEFKASKKSISSSAFS DE+YL VAGKKL+ILSTD+GDEL+VH
Sbjct: 121 GSNGMASEMDTETGNIIKEFKASKKSISSSAFSLDERYLVVAGKKLKILSTDDGDELIVH 180

Query: 181 SDKLGPVKLVSISDDAKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPPFVSECKN 240
            DKLGPVKLVS+SDDAK IITSE GAKHLQVWWC++SA K SRGP+LSMKHPPFVSEC+N
Sbjct: 181 PDKLGPVKLVSVSDDAKTIITSELGAKHLQVWWCNISAGKFSRGPILSMKHPPFVSECRN 240

Query: 241 ISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHGSAKKNRIS 300
           +SN+EDS+VVLSVSVSG AY+W+LK+LSEDEV+P KV+VKAND QSAEENHGSAKKNR S
Sbjct: 241 VSNQEDSVVVLSVSVSGAAYLWKLKVLSEDEVTPTKVSVKANDNQSAEENHGSAKKNRAS 300

Query: 301 VIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSGQG 360
           V+ASRI G GDNEVSVLVTHGS+D PQ +L +IGY+VKED NTAHE KTLQQND  S QG
Sbjct: 301 VLASRIHGIGDNEVSVLVTHGSVDLPQHTLLDIGYTVKEDANTAHENKTLQQNDCVSEQG 360

Query: 361 PHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVSDVGNGDASDVLFNDDINEPTMGEKLA 420
           PHEIEQ V TPKSKKSKKKRAAS++DSLTAGDVSDVGNGD SDVLFNDD+NEP+MGEKLA
Sbjct: 361 PHEIEQ-VITPKSKKSKKKRAASELDSLTAGDVSDVGNGDTSDVLFNDDLNEPSMGEKLA 420

Query: 421 SLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISK 480
           SLNL DQ++D   EQE+PSVP IPPSADSVQVLLKQALHADDRALLLECLYTKD KVISK
Sbjct: 421 SLNLADQNKDGGREQEDPSVPVIPPSADSVQVLLKQALHADDRALLLECLYTKDVKVISK 480

Query: 481 SIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLY 540
           SIAQLNSSDVL LLH+LIS IQSRGAILVCALPWLR L+LQHAS+IMSQESSLLALNSLY
Sbjct: 481 SIAQLNSSDVLTLLHALISFIQSRGAILVCALPWLRCLILQHASKIMSQESSLLALNSLY 540

Query: 541 QLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVPIIYEDEDDSDDQESGDEMET 600
           QLIESR STFQSA+LLSSSLDFLYT VLD+E +DND IVPIIYE E+DSD+ E+GDEMET
Sbjct: 541 QLIESRTSTFQSALLLSSSLDFLYTEVLDKEENDNDTIVPIIYE-EEDSDENETGDEMET 600

Query: 601 DEDEEEEEREEAFGDLSAGEV-DDMSE 624
           +ED+E +E  EAF DLSAGEV DDMSE
Sbjct: 601 NEDDERDE-VEAFDDLSAGEVDDDMSE 624

[Close]

BLAST of MS009428.1 vs. ExPASy TrEMBL
Match: A0A5A7UYX1 (WD repeat-containing protein 43 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002230 PE=4 SV=1)

HSP 1 Score: 930.2 bits (2403), Expect = 4.4e-267
Identity = 502/596 (84.23%), Postives = 542/596 (90.94%), Query Frame = 0


Query: 30  IWSARDGSLLAEWKDSEGKTDVGYSCLACCFVRKKKKSS-CVIAIGTDNGDVLAVNASSG 89
           IWS RDGSLLAEWKD +GK D GYSC+ACC + KK+KSS CV+AIGT+NGDVLAVNAS+G
Sbjct: 28  IWSTRDGSLLAEWKDLDGKDDFGYSCMACCLLGKKRKSSYCVVAIGTNNGDVLAVNASNG 87

Query: 90  ETKWVSAGCHIGGVIGLSFANKGRRLRTVGSNGMASEMDTETGNIIKEFKASKKSISSSA 149
           E KWVS GCH GGVIGLSFAN+GRRL TVGSNGMASEMDTETGNIIKEFKASKKSISSSA
Sbjct: 88  EKKWVSTGCHPGGVIGLSFANEGRRLHTVGSNGMASEMDTETGNIIKEFKASKKSISSSA 147

Query: 150 FSPDEKYLAVAGKKLRILSTDNGDELMVHSDKLGPVKLVSISDDAKAIITSEFGAKHLQV 209
           FS DEKYLAVAGKKL+ILS D+GDEL+VH DKL PVKLVSISDDAK IITSE GAKHLQV
Sbjct: 148 FSLDEKYLAVAGKKLKILSADDGDELIVHPDKLDPVKLVSISDDAKTIITSELGAKHLQV 207

Query: 210 WWCDMSARKLSRGPVLSMKHPPFVSECKNISNEEDSIVVLSVSVSGVAYVWRLKILSEDE 269
           WWCDMSA K SRGPVLSM HPPFVSEC+N+SN+EDS+VVLSVSVSG AY+W+LK+LSEDE
Sbjct: 208 WWCDMSAGKFSRGPVLSMNHPPFVSECRNVSNQEDSVVVLSVSVSGAAYLWKLKVLSEDE 267

Query: 270 VSPNKVTVKANDAQSAEENHGSAKKNRISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLF 329
           V P KV+VKAND QSAEENHGSAKKNR+SV+ASRI   GDNEVSVLVTHGS+D PQ SL 
Sbjct: 268 VIPTKVSVKANDNQSAEENHGSAKKNRVSVLASRIHRIGDNEVSVLVTHGSVDLPQHSLL 327

Query: 330 NIGYSVKEDLNTAHEKKTLQQNDDFSGQGPHEIEQAVTTPKSKKSKKKRAASDIDSLTAG 389
           +IGY+VKED NTAHE KTLQQND  S QGPHEIEQ V  PKSKKSKKKRAASD+DS TAG
Sbjct: 328 DIGYTVKEDANTAHENKTLQQNDGVSEQGPHEIEQ-VIAPKSKKSKKKRAASDLDSPTAG 387

Query: 390 DVSDVGNGDASDVLFNDDINEPTMGEKLASLNLLDQDEDESHEQEEPSVPAIPPSADSVQ 449
           DVSDVGNGDASDV+FNDD+NEP+MGEKLASLNL DQ+ED   EQE+PSVP IPPSADSVQ
Sbjct: 388 DVSDVGNGDASDVVFNDDLNEPSMGEKLASLNLADQNEDGGREQEDPSVPVIPPSADSVQ 447

Query: 450 VLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSLISIIQSRGAILVCA 509
           VLLKQALHADD ALLLECLYTKDDKVISKSIAQLNSSDVLKLLHS+IS IQSRGAILVCA
Sbjct: 448 VLLKQALHADDHALLLECLYTKDDKVISKSIAQLNSSDVLKLLHSVISFIQSRGAILVCA 507

Query: 510 LPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSAVLLSSSLDFLYTGVLDEE 569
           LPWLRGLLLQHAS+IMSQESSLLALNSLYQLIE+RISTFQSA+LLSSSLDFLYTGVLDEE
Sbjct: 508 LPWLRGLLLQHASKIMSQESSLLALNSLYQLIEARISTFQSALLLSSSLDFLYTGVLDEE 567

Query: 570 VDDNDAIVPIIYEDEDDSDDQESGDEMETDEDEEEEEREEAFGDLSAGEV-DDMSE 624
            +DNDAIVPIIYE E+DSD+ E+GDEMETDED+E +E  EAF DLSAGEV DDMSE
Sbjct: 568 ENDNDAIVPIIYE-EEDSDENETGDEMETDEDDERDE-VEAFDDLSAGEVDDDMSE 620

[Close]

BLAST of MS009428.1 vs. ExPASy TrEMBL
Match: A0A6J1HJF3 (WD repeat-containing protein 43 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111464569 PE=4 SV=1)

HSP 1 Score: 927.9 bits (2397), Expect = 2.2e-266
Identity = 507/627 (80.86%), Postives = 555/627 (88.52%), Query Frame = 0


Query: 1   MKKEMLKSPPITAFTPDGDYLAILSPNET--IWSARDGSLLAEWKDSEGKTDVGYSCLAC 60
           MK E  KSPPITAFTP+GDYLAILS N T  IW+  DGSLLAEWKD +GKTD GYSC+AC
Sbjct: 1   MKMEQHKSPPITAFTPNGDYLAILSSNGTVKIWNTSDGSLLAEWKDPDGKTDAGYSCIAC 60

Query: 61  CFVRKKKK-SSCVIAIGTDNGDVLAVNASSGETKWVSAGCHIGGVIGLSFANKGRRLRTV 120
           CFV KK+K SSC+IAIGT+ GDVL VNASSGETKWVSAGCH+GGVIGLSFA+KGRRL TV
Sbjct: 61  CFVGKKRKNSSCLIAIGTNGGDVLTVNASSGETKWVSAGCHLGGVIGLSFADKGRRLHTV 120

Query: 121 GSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGDELMVH 180
           GSNG+A +M+ ETG+II EFKASKKSISSSAFS DEKYLAVAGKKL+ILSTD+G ELMVH
Sbjct: 121 GSNGIAFKMNAETGSIINEFKASKKSISSSAFSLDEKYLAVAGKKLKILSTDDGVELMVH 180

Query: 181 SDKLGPVKLVSISDDAKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPPFVSECKN 240
            DKLGPVKL SISDDAK IITSE GAKH+QVWWCDMSA KLSRGPVLSMKHPPFVSEC+N
Sbjct: 181 PDKLGPVKLDSISDDAKTIITSEPGAKHIQVWWCDMSAGKLSRGPVLSMKHPPFVSECRN 240

Query: 241 ISNEEDSIVVLSVSVSGVAYVWRLKILSEDEVSPNKVTVKANDAQSAEENHGSAKKNRIS 300
           I+N EDSIVVLSVSVSGVAY+W+LK LSED+V+P KVTVK N+ +SAEENHGSAKKNRIS
Sbjct: 241 INNGEDSIVVLSVSVSGVAYLWKLKFLSEDKVNPTKVTVKVNNVESAEENHGSAKKNRIS 300

Query: 301 VIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQQNDDFSGQG 360
           V++S I G GDNEVSVLVTHGSMD PQ ++ NIGY  KED N A EK           +G
Sbjct: 301 VLSSTIQGLGDNEVSVLVTHGSMDLPQHTVLNIGYPAKEDANIALEK-----------EG 360

Query: 361 PHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVSDVGNGDASDVLFNDDINEPTMGEKLA 420
           PHEI+QAVT+PKSKKSKKKRAASD+DS  AGDVSDVGN D S+VLFNDD+NEPTMG+KLA
Sbjct: 361 PHEIKQAVTSPKSKKSKKKRAASDLDSQKAGDVSDVGNEDMSNVLFNDDLNEPTMGDKLA 420

Query: 421 SLNLLDQDEDESHEQEEPSVPAIPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISK 480
           SLNL +Q+EDE+HEQ+EPSVPAIPPSADSVQVLLKQAL ADDRALLLECLYTKDDKVISK
Sbjct: 421 SLNLEEQNEDENHEQDEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISK 480

Query: 481 SIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLY 540
           SIAQLNSSDVLKLLH+LISIIQSRGAILVCA+PWLRGLLLQHASRIMSQESSLLALNSLY
Sbjct: 481 SIAQLNSSDVLKLLHALISIIQSRGAILVCAIPWLRGLLLQHASRIMSQESSLLALNSLY 540

Query: 541 QLIESRISTFQSAVLLSSSLDFLYTGVLDEEVDDNDAIVPIIYEDEDDSDDQESGDEMET 600
           QLIESRISTFQSA+LLSSSLDFLYTGVLDEE ++NDAIVPIIYE++D  D + SGDEMET
Sbjct: 541 QLIESRISTFQSALLLSSSLDFLYTGVLDEEAEENDAIVPIIYEEDDSDDKESSGDEMET 600

Query: 601 DEDEEEEEREEAFGDLSAGEV-DDMSE 624
           DE+    E  EAF DLSAGEV DDMSE
Sbjct: 601 DEEGGGVE-VEAFDDLSAGEVDDDMSE 615

[Close]

BLAST of MS009428.1 vs. TAIR 10
Match: AT1G15420.1 (CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp12 (InterPro:IPR007148); Has 764 Blast hits to 656 proteins in 193 species: Archae - 0; Bacteria - 42; Metazoa - 237; Fungi - 154; Plants - 85; Viruses - 23; Other Eukaryotes - 223 (source: NCBI BLink). )

HSP 1 Score: 199.5 bits (506), Expect = 7.8e-51
Identity = 135/259 (52.12%), Postives = 180/259 (69.50%), Query Frame = 0


Query: 369 KSKKSKKKRAASDIDSLTAGDVSDVGNGDASDVLFNDDINEPTMGEKLASLNLLDQDEDE 428
           K KK  KKRA  + D  +  D     + D   VL +D +NEPT+G+KL SL+LL+ ++  
Sbjct: 27  KHKKKSKKRAEPEPDIPSTRDSG--LDEDRDGVLVDDTLNEPTIGDKLESLDLLNGEKVN 86

Query: 429 SHEQEEPSVPA--IPPSADSVQVLLKQALHADDRALLLECLYTKDDKVISKSIAQLNSSD 488
           S E    S P    PP+A SV VLL+QALHADDR+LLL+CLY +D++VI+ S+A+LNS++
Sbjct: 87  SEESNRDSAPGDDKPPTAASVNVLLRQALHADDRSLLLDCLYNRDEQVIANSVAKLNSAE 146

Query: 489 VLKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRIST 548
           VLKLL++L+ I+QSRGAIL C +PW++ LLL H+S IMSQESSLLALN++YQLIESR+ST
Sbjct: 147 VLKLLNALLPILQSRGAILACTIPWIKSLLLTHSSGIMSQESSLLALNTMYQLIESRVST 206

Query: 549 FQSAVLLSSSLDFLYTGVLDEEVDDNDAIVPIIYEDEDDSDDQESGDE--METDEDEEEE 608
             +AV +SS LD L    LDEE D+     P+IYED+D  +D+E G E  METDE+ ++ 
Sbjct: 207 IHTAVEVSSGLD-LIVDDLDEEEDEG----PVIYEDKDSDEDEEEGIEEAMETDEEADDS 266

Query: 609 EREEAFGDLSAGEVDDMSE 624
             E A G       DDMS+
Sbjct: 267 ADEAADGVNDFEGFDDMSD 278

[Close]

BLAST of MS009428.1 vs. TAIR 10
Match: AT5G11240.1 (transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 145.6 bits (366), Expect = 1.3e-34
Identity = 161/633 (25.43%), Postives = 290/633 (45.81%), Query Frame = 0


Query: 11  ITAFTPDGDYLAILSPNE--TIWSARDGSLLAEWKD-------------SEGKTDVGYSC 70
           +T+F+P  DYLA+ + +    IW    G +  E+ D              +G   V Y+C
Sbjct: 10  LTSFSPALDYLALSTGDGRIKIWDTVKGQVQTEFADIASTEETNIYTKVGKGHLSVDYTC 69

Query: 71  LACCFVRKKKK---SSCVIAIGTDNGDVLAVNASSGETKWVSAGCHIGGVIGLSFANKGR 130
           +    + KKKK    + V+ +GT  GDVLA++ +SG+ KW  + CH GGV  +S + K  
Sbjct: 70  MKWLSLEKKKKRKLGTSVLVLGTGGGDVLALDVASGQLKWRISDCHPGGVNAVSSSAKAS 129

Query: 131 RLRTVGSNGMASEMDTETGNIIKEFKASKKSISSSAFSPDEKYLAVAGKKLRILSTDNGD 190
            + + G++GM  ++D  +GN+I++FKAS K++SS   SPD K L  A  +L+  +  +  
Sbjct: 130 CIYSGGADGMVCQIDPHSGNLIRKFKASTKTVSSLCVSPDGKILVTASTQLKTFNCSDLK 189

Query: 191 ELMVHSDKLGPVKLVSISDDAKAIITSEFGAKHLQVWWCDMSARKLSRGPVLSMKHPPFV 250
           ++   +   G V+ V+ ++D K +++S  G +++ VW  D  A+K S   VL+++HPP  
Sbjct: 190 KIQKFTGHPGVVRCVAFTEDGKYVLSSAVGERYIAVWKTD-GAKKQSASCVLALEHPPVF 249

Query: 251 SECKNISNEEDSIVVLSVSVSGVAYVWRLKILSE-DEVSPNKVTVKANDAQSAEENHGSA 310
            +    +NE+  + VL++S  GV Y W    + E    +P KV +      +A+ +    
Sbjct: 250 VDSWGETNEK-GLYVLAISEIGVCYFWYGSNVEELCNATPTKVAL-----ATADSSLKPY 309

Query: 311 KKNRISVIASRIDGSGDNEVSVLVTHGSMDQPQLSLFNIGYSVKEDLNTAHEKKTLQ-QN 370
           K +   + A+++ G        ++  GS      +    G  VK     + +K  LQ  N
Sbjct: 310 KSSLPLIFAAKLQG--------ILKPGSAH----AFIASGLLVK----PSFQKMVLQFGN 369

Query: 371 DDFSGQGPHEIEQAVTTPKSKKSKKKRAASDIDSLTAGDVSDVGNGDASDVLFNDDINEP 430
           D         I   +T   SK SK++   + + +L      D        +    D++E 
Sbjct: 370 DLVLNASKDGILLPITQSVSKSSKRQGVQNKVTTLDRAHAEDA----LLPIARVADLHE- 429

Query: 431 TMGEKLASLNLLDQDE---DESHEQEEPSVPAIPPSADSVQVLLKQALHAD-DRALLLEC 490
              +K   L+  D+D    D+SH     +  ++     S+ +L     H +   A +++ 
Sbjct: 430 ---KKSVQLHSSDKDTYMVDQSHADHVETF-SMEDKLRSLGILGGTDEHKNLSYASIIDG 489

Query: 491 LYTK---DDKVISKSIAQLNSSDVLKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRI 550
              K     K +  ++  +  S   K L +L ++ Q+R       LPW+  +++ H+  I
Sbjct: 490 TDLKAYLPPKKLKSAVLSMEPSTAFKTLEALAAMWQTRACGGRHLLPWIYSIMVNHSHYI 549

Query: 551 MSQE-SSLLALNSLYQLIESRISTFQSAVLLSSSLDFLYTGV----------------LD 600
           MSQE  +   LN+L ++ +SR +  Q  + LS  L  +   +                +D
Sbjct: 550 MSQEPKNQQLLNTLVKITKSRGTALQQLLQLSGRLQLVTAQINKAAGSQTQITAHDQEID 609

The following BLAST results are available for this feature:

BLAST of MS009428.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150139.1	0.0e+00	98.89	WD repeat-containing protein 43 [Momordica charantia]	[more]
XP_038899613.1	2.4e-288	85.65	WD repeat-containing protein 43 [Benincasa hispida]	[more]
XP_008461080.1	9.3e-280	83.73	PREDICTED: WD repeat-containing protein 43 [Cucumis melo]	[more]
XP_004136081.1	5.8e-274	82.30	WD repeat-containing protein 43 isoform X2 [Cucumis sativus] >KGN45296.1 hypothe...	[more]
XP_031744699.1	9.3e-272	81.26	WD repeat-containing protein 43 isoform X1 [Cucumis sativus]	[more]

BLAST of MS009428.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q15061	2.5e-09	23.97	WD repeat-containing protein 43 OS=Homo sapiens OX=9606 GN=WDR43 PE=1 SV=3	[more]
Q6ZQL4	2.3e-07	22.73	WD repeat-containing protein 43 OS=Mus musculus OX=10090 GN=Wdr43 PE=1 SV=2	[more]

BLAST of MS009428.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D938	0.0e+00	98.89	WD repeat-containing protein 43 OS=Momordica charantia OX=3673 GN=LOC111018389 P...	[more]
A0A1S3CDX9	4.5e-280	83.73	WD repeat-containing protein 43 OS=Cucumis melo OX=3656 GN=LOC103499777 PE=4 SV=...	[more]
A0A0A0KBW9	2.8e-274	82.30	Utp12 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G433260 PE=4 ...	[more]
A0A5A7UYX1	4.4e-267	84.23	WD repeat-containing protein 43 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1HJF3	2.2e-266	80.86	WD repeat-containing protein 43 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of MS009428.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15420.1	7.8e-51	52.12	CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp12 (InterPro:IPR007148)...	[more]
AT5G11240.1	1.3e-34	25.43	transducin family protein / WD-40 repeat family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007148	Small-subunit processome, Utp12	PFAM	PF04003	Utp12	coord: 459..560 e-value: 5.3E-13 score: 49.2
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 11..317 e-value: 7.8E-21 score: 76.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 579..610
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 348..391
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 579..623
None	No IPR available	PANTHER	PTHR42968	WD REPEAT-CONTAINING	coord: 63..622
None	No IPR available	PANTHER	PTHR42968:SF14	OS01G0649000 PROTEIN	coord: 63..622
IPR011047	Quinoprotein alcohol dehydrogenase-like superfamily	SUPERFAMILY	50998	Quinoprotein alcohol dehydrogenase-like	coord: 10..261

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS009428	MS009428	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS009428.1-cds	MS009428.1-cds-scaffold813:1225725..1225904	CDS
MS009428.1-cds	MS009428.1-cds-scaffold813:1225990..1226064	CDS
MS009428.1-cds	MS009428.1-cds-scaffold813:1226148..1226259	CDS
MS009428.1-cds	MS009428.1-cds-scaffold813:1226351..1226433	CDS
MS009428.1-cds	MS009428.1-cds-scaffold813:1226525..1226763	CDS
MS009428.1-cds	MS009428.1-cds-scaffold813:1226847..1226957	CDS
MS009428.1-cds	MS009428.1-cds-scaffold813:1227053..1227578	CDS
MS009428.1-cds	MS009428.1-cds-scaffold813:1227650..1227738	CDS
MS009428.1-cds	MS009428.1-cds-scaffold813:1227816..1227970	CDS
MS009428.1-cds	MS009428.1-cds-scaffold813:1228406..1228512	CDS
MS009428.1-cds	MS009428.1-cds-scaffold813:1228614..1228718	CDS
MS009428.1-cds	MS009428.1-cds-scaffold813:1228860..1228946	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS009428.1	MS009428.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding