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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. CAATTACGGCCGAGATCCCACGCACTTCATCAATGTTCTGTAATTCCTTCAATTCGCTATCTGTTCTTTCCTTGAACTGTCTTTCAGGGTTTAATTTTGTGTTGTAATTTTCTATCCGGGATATATTTTGAACTCATTTTCATTTGATTGCCTTGCGGGAAGGGGAAAGTTAATAGACGAGAGGAATAAGTTTTGTTTGCGAGTTCGAATT mRNA sequence CAATTACGGCCGAGATCCCACGCACTTCATCAATGTTCTGGTTTAATTTTGTGTTGTAATTTTCTATCCGGGATATATTTTGAACTCTTTTCATTTGATTGCCTTGCGGGAAGGGGAAAGTTAATAGACGAGAGGAATAAGTTTTGTTTGCGAGTTCGAATT Coding sequence (CDS) CAATTACGGCCGAGATCCCACGCACTTCATCAATGTTCTGGTTTAATTTTGTGTTGTAATTTTCTATCCGGGATATATTTTGAACTCTTTTCATTTGATTGCCTTGCGGGAAGGGGAAAGTTAATAGACGAGAGGAATAAGTTTTGTTTGCGAGTTCGAATT Protein sequence QLRPRSHALHQCSGLILCCNFLSGIYFELFSFDCLAGRGKLIDERNKFCLRVRI
Homology
BLAST of MS009394.1 vs. NCBI nr
Match: KGN45258.1 (hypothetical protein Csa_016845 [Cucumis sativus]) HSP 1 Score: 80.5 bits (197), Expect = 4.9e-12 Identity = 36/53 (67.92%), Postives = 42/53 (79.25%), Query Frame = 0
Query: 1 QLRPRSHALHQCSGLILCCNFLSGIYFEL-FSFDCLAGRGKLIDERNKFCLRV 53
QLRPRSH LHQCSGL CC+FLSG YFEL F+++C+ GRGKL +E N C RV
Sbjct: 68 QLRPRSHLLHQCSGLFFCCHFLSGNYFELPFAYNCVPGRGKLTNEMNGVCFRV 120
BLAST of MS009394.1 vs. ExPASy TrEMBL
Match: A0A0A0K6X3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432400 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 2.4e-12 Identity = 36/53 (67.92%), Postives = 42/53 (79.25%), Query Frame = 0
Query: 1 QLRPRSHALHQCSGLILCCNFLSGIYFEL-FSFDCLAGRGKLIDERNKFCLRV 53
QLRPRSH LHQCSGL CC+FLSG YFEL F+++C+ GRGKL +E N C RV
Sbjct: 68 QLRPRSHLLHQCSGLFFCCHFLSGNYFELPFAYNCVPGRGKLTNEMNGVCFRV 120
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KGN45258.1 | 4.9e-12 | 67.92 | hypothetical protein Csa_016845 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0K6X3 | 2.4e-12 | 67.92 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432400 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
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Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Type |
|---|
| MS009394 | MS009394 | gene |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MS009394.1-cds | MS009394.1-cds-scaffold813:1030134..1030172 | CDS |
| MS009394.1-cds | MS009394.1-cds-scaffold813:1030221..1030268 | CDS |
| MS009394.1-cds | MS009394.1-cds-scaffold813:1030270..1030344 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| MS009394.1 | MS009394.1-protein | polypeptide |
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