MS007902.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS007902.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	cysteine-rich repeat secretory protein 15
Location	scaffold13: 2222086 .. 2222196 (+)
Sequence length	111
RNA-Seq Expression	MS007902.1
Synteny	MS007902.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCCGAGCGACGACCAAGCCGGGAAGACCGTCGCTATCATCATCGGTGTCGTCGCCGCTCTAGCCATCCTTGTCGTTCTCCTCTCGGTCTGCAGAAGAGCAATGGGTACG

mRNA sequence

TCTCCGAGCGACGACCAAGCCGGGAAGACCGTCGCTATCATCATCGGTGTCGTCGCCGCTCTAGCCATCCTTGTCGTTCTCCTCTCGGTCTGCAGAAGAGCAATGGGTACG

Coding sequence (CDS)

TCTCCGAGCGACGACCAAGCCGGGAAGACCGTCGCTATCATCATCGGTGTCGTCGCCGCTCTAGCCATCCTTGTCGTTCTCCTCTCGGTCTGCAGAAGAGCAATGGGTACG

Protein sequence

SPSDDQAGKTVAIIIGVVAALAILVVLLSVCRRAMGT

Homology

[Close]

BLAST of MS007902.1 vs. NCBI nr
Match: XP_022155711.1 (cysteine-rich repeat secretory protein 15 isoform X1 [Momordica charantia])

HSP 1 Score: 63.5 bits (153), Expect = 4.3e-07
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 0


Query: 1   SPSDDQAGKTVAIIIGVVAALAILVVLLSVCRRAMG 37
           SPSDDQAGKTVAIIIGVVAALAILVVLLSVCRRAMG
Sbjct: 272 SPSDDQAGKTVAIIIGVVAALAILVVLLSVCRRAMG 307

[Close]

BLAST of MS007902.1 vs. NCBI nr
Match: XP_004145009.2 (plasmodesmata-located protein 8 [Cucumis sativus] >KAE8646704.1 hypothetical protein Csa_005284 [Cucumis sativus])

HSP 1 Score: 63.5 bits (153), Expect = 4.3e-07
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 0


Query: 1   SPSDDQAGKTVAIIIGVVAALAILVVLLSVCRRAMG 37
           SPSDDQAGKTVAIIIGVVAALAILVVLLSVCRRAMG
Sbjct: 268 SPSDDQAGKTVAIIIGVVAALAILVVLLSVCRRAMG 303

[Close]

BLAST of MS007902.1 vs. NCBI nr
Match: TYK24514.1 (cysteine-rich repeat secretory protein 15 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 63.5 bits (153), Expect = 4.3e-07
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 0


Query: 1   SPSDDQAGKTVAIIIGVVAALAILVVLLSVCRRAMG 37
           SPSDDQAGKTVAIIIGVVAALAILVVLLSVCRRAMG
Sbjct: 185 SPSDDQAGKTVAIIIGVVAALAILVVLLSVCRRAMG 220

[Close]

BLAST of MS007902.1 vs. NCBI nr
Match: XP_038906617.1 (plasmodesmata-located protein 8 [Benincasa hispida])

HSP 1 Score: 61.6 bits (148), Expect = 1.6e-06
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 0


Query: 1   SPSDDQAGKTVAIIIGVVAALAILVVLLSVCRRAMGT 38
           SPSDDQAGKTVAIIIGVVAALAILVVLLSVCRRAM +
Sbjct: 263 SPSDDQAGKTVAIIIGVVAALAILVVLLSVCRRAMAS 299

[Close]

BLAST of MS007902.1 vs. NCBI nr
Match: XP_022155713.1 (cysteine-rich repeat secretory protein 15 isoform X2 [Momordica charantia])

HSP 1 Score: 61.6 bits (148), Expect = 1.6e-06
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 0


Query: 1   SPSDDQAGKTVAIIIGVVAALAILVVLLSVCRRAMGT 38
           SPSDDQAGKTVAIIIGVVAALAILVVLLSVCRRAM +
Sbjct: 272 SPSDDQAGKTVAIIIGVVAALAILVVLLSVCRRAMAS 308

[Close]

BLAST of MS007902.1 vs. ExPASy TrEMBL
Match: A0A5D3DLP5 (Cysteine-rich repeat secretory protein 15 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00560 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.1e-07
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 0


Query: 1   SPSDDQAGKTVAIIIGVVAALAILVVLLSVCRRAMG 37
           SPSDDQAGKTVAIIIGVVAALAILVVLLSVCRRAMG
Sbjct: 185 SPSDDQAGKTVAIIIGVVAALAILVVLLSVCRRAMG 220

[Close]

BLAST of MS007902.1 vs. ExPASy TrEMBL
Match: A0A0A0KEQ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G078510 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.1e-07
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 0


Query: 1   SPSDDQAGKTVAIIIGVVAALAILVVLLSVCRRAMG 37
           SPSDDQAGKTVAIIIGVVAALAILVVLLSVCRRAMG
Sbjct: 185 SPSDDQAGKTVAIIIGVVAALAILVVLLSVCRRAMG 220

[Close]

BLAST of MS007902.1 vs. ExPASy TrEMBL
Match: A0A6J1DSI2 (cysteine-rich repeat secretory protein 15 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022773 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.1e-07
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 0


Query: 1   SPSDDQAGKTVAIIIGVVAALAILVVLLSVCRRAMG 37
           SPSDDQAGKTVAIIIGVVAALAILVVLLSVCRRAMG
Sbjct: 272 SPSDDQAGKTVAIIIGVVAALAILVVLLSVCRRAMG 307

[Close]

BLAST of MS007902.1 vs. ExPASy TrEMBL
Match: A0A6J1DNN9 (cysteine-rich repeat secretory protein 15 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022773 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 7.9e-07
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 0


Query: 1   SPSDDQAGKTVAIIIGVVAALAILVVLLSVCRRAMGT 38
           SPSDDQAGKTVAIIIGVVAALAILVVLLSVCRRAM +
Sbjct: 272 SPSDDQAGKTVAIIIGVVAALAILVVLLSVCRRAMAS 308

[Close]

BLAST of MS007902.1 vs. ExPASy TrEMBL
Match: A0A1S3CC77 (cysteine-rich repeat secretory protein 15 OS=Cucumis melo OX=3656 GN=LOC103499010 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 7.9e-07
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 0


Query: 1   SPSDDQAGKTVAIIIGVVAALAILVVLLSVCRRAMGT 38
           SPSDDQAGKTVAIIIGVVAALAILVVLLSVCRRAM +
Sbjct: 260 SPSDDQAGKTVAIIIGVVAALAILVVLLSVCRRAMAS 296

The following BLAST results are available for this feature:

BLAST of MS007902.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155711.1	4.3e-07	100.00	cysteine-rich repeat secretory protein 15 isoform X1 [Momordica charantia]	[more]
XP_004145009.2	4.3e-07	100.00	plasmodesmata-located protein 8 [Cucumis sativus] >KAE8646704.1 hypothetical pro...	[more]
TYK24514.1	4.3e-07	100.00	cysteine-rich repeat secretory protein 15 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_038906617.1	1.6e-06	94.59	plasmodesmata-located protein 8 [Benincasa hispida]	[more]
XP_022155713.1	1.6e-06	94.59	cysteine-rich repeat secretory protein 15 isoform X2 [Momordica charantia]	[more]

BLAST of MS007902.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS007902.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DLP5	2.1e-07	100.00	Cysteine-rich repeat secretory protein 15 isoform X1 OS=Cucumis melo var. makuwa...	[more]
A0A0A0KEQ2	2.1e-07	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G078510 PE=4 SV=1	[more]
A0A6J1DSI2	2.1e-07	100.00	cysteine-rich repeat secretory protein 15 isoform X1 OS=Momordica charantia OX=3...	[more]
A0A6J1DNN9	7.9e-07	94.59	cysteine-rich repeat secretory protein 15 isoform X2 OS=Momordica charantia OX=3...	[more]
A0A1S3CC77	7.9e-07	94.59	cysteine-rich repeat secretory protein 15 OS=Cucumis melo OX=3656 GN=LOC10349901...	[more]

BLAST of MS007902.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS007902	MS007902	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS007902.1-cds	MS007902.1-cds-scaffold13:2222086..2222196	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS007902.1	MS007902.1-protein	polypeptide