Homology
BLAST of MS005701.1 vs. NCBI nr
Match:
KAG6597225.1 (Replication factor C subunit 3, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 749.6 bits (1934), Expect = 2.1e-212
Identity = 423/616 (68.67%), Postives = 479/616 (77.76%), Query Frame = 0
Query: 5 DNNNNPSLRRSVSDPRLSRHRRRRRTFST--TSSKSSWSSKLAKILARLALFSSDSELTE 64
+++++ SLRRS+SD R +RRR + ST +SSKSSWS+KLAK+LARL LFS +S+LTE
Sbjct: 9 NSSSSSSLRRSLSDSNTRRRQRRRGSISTASSSSKSSWSTKLAKLLARLNLFSRNSDLTE 68
Query: 65 ESLEAHNKRIREELEQRQLHDKTP-KSSPYYRGLTDSSLAINYHHGPLATPGPAHQQLSG 124
ESL+AHN+RI + DKTP KSSPYYRGLTDSSLAINYHHGPL T G
Sbjct: 69 ESLQAHNERIDD-------LDKTPLKSSPYYRGLTDSSLAINYHHGPLTT---------G 128
Query: 125 PHYASSSATQV---TSFSSIVVSKLKGWAPCL-GKSNDKPAPGPDKNNNNNSIIQNIPTV 184
PH+ +SS T TS S VVSKLK WAPCL GK N KP + + +
Sbjct: 129 PHHYASSTTTAQTQTSLSYAVVSKLKEWAPCLIGKPNTKPPAHQQYETPTTTTV--VGKT 188
Query: 185 TKTASSSSSKPKPRPKPRPKPEPDPEPEPEPVRRSEEALNISNDDGDHQEKLLRERSLQ- 244
T A SSS PE + R + +EKLLRER +
Sbjct: 189 TSLAVSSS--------------------PEKIERWAT---------EKEEKLLRERLVMY 248
Query: 245 -SRRGG------GGGEVAEKERYTWGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNYI 304
R GG GGGE AEKERYTWGDKYRPKVLE+FICNR+ A +LK++V EKGCG+YI
Sbjct: 249 GRREGGSGVGVDGGGEAAEKERYTWGDKYRPKVLEDFICNRKTACELKKLVEEKGCGHYI 308
Query: 305 FEGPPGVGKRTMIRAMLREAFGHQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNL 364
FEGPPGVGKRTMI+AMLR+AFG QAME+KEV RVF LKSEMVG IEVKV+ESSH VEVNL
Sbjct: 309 FEGPPGVGKRTMIQAMLRQAFGEQAMEVKEVDRVFALKSEMVGSIEVKVKESSHCVEVNL 368
Query: 365 SQTKGFEKQVIVQLIKETHSPLPCNHSNCQGILLCEAEKLSNETLMYVKWAIERNKGCSK 424
SQTKGFEKQVI QLIKET SPLPCNH+ C+GILLCEA++LSNETLMYVKWAIERNKGCSK
Sbjct: 369 SQTKGFEKQVIDQLIKETQSPLPCNHARCRGILLCEADQLSNETLMYVKWAIERNKGCSK 428
Query: 425 IFFCCSDVSKLLPLTSLCTLIHLSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIADNSKN 484
IFFCCSDVSKLL L+S CT +HLSPPSKQEIVEVLE++AKQ+ FDLS R+AERIADNSKN
Sbjct: 429 IFFCCSDVSKLLLLSSFCTHVHLSPPSKQEIVEVLEYIAKQQEFDLSRRMAERIADNSKN 488
Query: 485 NLRQAIRSLEASWNKSQLFEEDENQLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKL 544
NLRQAIRSLEASW KS+LFEEDEN+LLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKL
Sbjct: 489 NLRQAIRSLEASWKKSRLFEEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKL 548
Query: 545 IEHDVSPNFIFRTLVDELKKFLDEELQRRIEGLYADYNKIEEKTFVSDQQGNGEEAVAKV 604
IE+DVSPNFIF+TLVDELKKFLDEELQRR+E YADYNK+EEK FV+ ++GNGEEAV K
Sbjct: 549 IEYDVSPNFIFKTLVDELKKFLDEELQRRVESFYADYNKMEEKPFVT-EKGNGEEAVIKE 576
Query: 605 LHDPMRKNVHHFMKIE 606
LHDPMRKNV+HF+KIE
Sbjct: 609 LHDPMRKNVNHFLKIE 576
BLAST of MS005701.1 vs. NCBI nr
Match:
XP_022946202.1 (replication factor C subunit 3-like [Cucurbita moschata])
HSP 1 Score: 748.8 bits (1932), Expect = 3.6e-212
Identity = 423/616 (68.67%), Postives = 478/616 (77.60%), Query Frame = 0
Query: 5 DNNNNPSLRRSVSDPRLSRHRRRRRTFST--TSSKSSWSSKLAKILARLALFSSDSELTE 64
+++++ SLRRS+SD R +RRR + ST +SSKSSWS+KLAK+LARL LFS +S+LTE
Sbjct: 9 NSSSSSSLRRSLSDSNTRRRQRRRGSISTASSSSKSSWSTKLAKLLARLNLFSRNSDLTE 68
Query: 65 ESLEAHNKRIREELEQRQLHDKTP-KSSPYYRGLTDSSLAINYHHGPLATPGPAHQQLSG 124
ESL+AHN+RI + DKTP KSSPYYRGLTDSSLAINYHHGPL T G
Sbjct: 69 ESLQAHNERIDD-------LDKTPLKSSPYYRGLTDSSLAINYHHGPLTT---------G 128
Query: 125 PHYASSSATQV---TSFSSIVVSKLKGWAPCL-GKSNDKPAPGPDKNNNNNSIIQNIPTV 184
PH+ +SS T TS S VVSKLK WAPCL GK N KP + + +
Sbjct: 129 PHHYASSTTTAQTQTSLSYAVVSKLKEWAPCLIGKPNTKPPAHQQYETPTTTTV--VGKT 188
Query: 185 TKTASSSSSKPKPRPKPRPKPEPDPEPEPEPVRRSEEALNISNDDGDHQEKLLRERSLQ- 244
T A SSS PE + R + +EKLLRER +
Sbjct: 189 TSLAVSSS--------------------PEKIERWAT---------EKEEKLLRERLVMY 248
Query: 245 -SRRGG------GGGEVAEKERYTWGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNYI 304
R GG GGGE AEKERYTWGDKYRPKVLE+FICNR+ A +LK+VV EKGCG+YI
Sbjct: 249 GRREGGSGVGVDGGGEAAEKERYTWGDKYRPKVLEDFICNRKTACELKKVVEEKGCGHYI 308
Query: 305 FEGPPGVGKRTMIRAMLREAFGHQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNL 364
FEGPPGVGKRTMI+AMLR+AFG QAME+KEV RVF LKSEMVG IEVKV+ESSH VEVNL
Sbjct: 309 FEGPPGVGKRTMIQAMLRQAFGEQAMEVKEVDRVFALKSEMVGSIEVKVKESSHCVEVNL 368
Query: 365 SQTKGFEKQVIVQLIKETHSPLPCNHSNCQGILLCEAEKLSNETLMYVKWAIERNKGCSK 424
SQTKGFEKQVI QLIKET SPLPCNH+ C+GILLCEA++LSNETLMYVKWAIERNKGCSK
Sbjct: 369 SQTKGFEKQVIDQLIKETQSPLPCNHARCRGILLCEADQLSNETLMYVKWAIERNKGCSK 428
Query: 425 IFFCCSDVSKLLPLTSLCTLIHLSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIADNSKN 484
IFFCCSDVSKLL L+S CT +HLSPPSKQEIVEVLE++AKQ+ FDLS R+AERIADNSKN
Sbjct: 429 IFFCCSDVSKLLLLSSFCTHVHLSPPSKQEIVEVLEYIAKQQEFDLSRRMAERIADNSKN 488
Query: 485 NLRQAIRSLEASWNKSQLFEEDENQLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKL 544
NLRQAIRSLEASW KS+LFEEDEN+LLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKL
Sbjct: 489 NLRQAIRSLEASWKKSRLFEEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKL 548
Query: 545 IEHDVSPNFIFRTLVDELKKFLDEELQRRIEGLYADYNKIEEKTFVSDQQGNGEEAVAKV 604
IE+DVSPNFIF+TLVDELKKFLDEELQ R+E YADYNK+EEK FV+ ++GNGEEAV K
Sbjct: 549 IEYDVSPNFIFKTLVDELKKFLDEELQHRVESFYADYNKMEEKPFVT-EKGNGEEAVIKE 576
Query: 605 LHDPMRKNVHHFMKIE 606
LHDPMRKNV+HF+KIE
Sbjct: 609 LHDPMRKNVNHFLKIE 576
BLAST of MS005701.1 vs. NCBI nr
Match:
XP_022975501.1 (replication factor C subunit 3-like [Cucurbita maxima])
HSP 1 Score: 746.1 bits (1925), Expect = 2.4e-211
Identity = 425/617 (68.88%), Postives = 480/617 (77.80%), Query Frame = 0
Query: 7 NNNPSLRRSVSDPRLSRHRRRRRTFST--TSSKSSWSSKLAKILARLALFSSDSELTEES 66
+++ SLRRS+SD R +RR + ST +SSKSSWS+KLAK+LARL LFS +S+LTEES
Sbjct: 11 SSSSSLRRSLSDSNTRRRQRRHWSISTASSSSKSSWSTKLAKLLARLNLFSRNSDLTEES 70
Query: 67 LEAHNKRIREELEQRQLHDKTP-KSSPYYRGLTDSSLAINYHHGPLATPGPAHQQLSGPH 126
L+AHN+RI + DKTP KSSPYYRGLTDSSLAINYHHGPL T H H
Sbjct: 71 LQAHNERIDD-------LDKTPLKSSPYYRGLTDSSLAINYHHGPLTT---THVTTGPHH 130
Query: 127 YASSSAT--QVTSFSSIVVSKLKGWAPCL-GKSNDKPAPGPDKNNNNNSIIQNIPTVTKT 186
YASS+ T TS S VVSKLK WAPCL GK N KP P + + + T +
Sbjct: 131 YASSTTTAQTQTSLSYAVVSKLKEWAPCLIGKPNKKP---PAHHQHETPTTTTVVGKTTS 190
Query: 187 ASSSSSKPKPRPKPRPKPEPDPEPEPEPVRRSEEALNISNDDGDHQEKLLRER-SLQSRR 246
++SSS PE + R + +EKLLRER + RR
Sbjct: 191 LATSSS-------------------PEKIERLAT---------EKEEKLLRERLVMYGRR 250
Query: 247 GG-------GGGEVA----EKERYTWGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNY 306
G GGGE + EKERYTWGDKYRPKVLE+FICNR+ A +LK+VV EKGCG+Y
Sbjct: 251 EGRSGVGVDGGGEASEKEKEKERYTWGDKYRPKVLEDFICNRQTACELKKVVEEKGCGHY 310
Query: 307 IFEGPPGVGKRTMIRAMLREAFGHQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVN 366
IFEGPPGVGKRTMI+AMLR+AFG QAME+KEV RVF LKSEMVG IEVKV+ESSH VEVN
Sbjct: 311 IFEGPPGVGKRTMIQAMLRQAFGEQAMEVKEVGRVFALKSEMVGSIEVKVKESSHCVEVN 370
Query: 367 LSQTKGFEKQVIVQLIKETHSPLPCNHSNCQGILLCEAEKLSNETLMYVKWAIERNKGCS 426
LSQTKGFEKQVI QLIKET SPLPCNH+ C+GILLCEA++LSNETLMYVKWAIERNKGCS
Sbjct: 371 LSQTKGFEKQVIDQLIKETQSPLPCNHARCRGILLCEADQLSNETLMYVKWAIERNKGCS 430
Query: 427 KIFFCCSDVSKLLPLTSLCTLIHLSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIADNSK 486
KIFFCCSDVSKLL L+SLCT +HLSPPSKQEIVEVLE++AKQ+ FDLS R+AERIADNSK
Sbjct: 431 KIFFCCSDVSKLLLLSSLCTHVHLSPPSKQEIVEVLEYIAKQQEFDLSRRMAERIADNSK 490
Query: 487 NNLRQAIRSLEASWNKSQLFEEDENQLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKK 546
NNLRQAIRSLEASW KS+LFEEDEN+LLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKK
Sbjct: 491 NNLRQAIRSLEASWKKSRLFEEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKK 550
Query: 547 LIEHDVSPNFIFRTLVDELKKFLDEELQRRIEGLYADYNKIEEKTFVSDQQGNGEEAVAK 606
LIE+DVSPNFIF+TLVDELKKFLDEELQRR+E YADYNK+EEK FV+D +GNGEEAV K
Sbjct: 551 LIEYDVSPNFIFKTLVDELKKFLDEELQRRVESFYADYNKMEEKPFVTD-KGNGEEAVIK 585
BLAST of MS005701.1 vs. NCBI nr
Match:
XP_008438224.1 (PREDICTED: replication factor C subunit 3-like [Cucumis melo])
HSP 1 Score: 722.6 bits (1864), Expect = 2.8e-204
Identity = 412/619 (66.56%), Postives = 476/619 (76.90%), Query Frame = 0
Query: 1 MANDDNNNNPSLRRSVSDPRLSRHR-RRRRTFSTTSSKSSWSSKLAKILARLALFSSDSE 60
MA PSLRRS+SD R R RRR T STTSSKSSWSSKL K+LARLAL S DS+
Sbjct: 1 MATQQQLQQPSLRRSLSDSNHRRRRSRRRATISTTSSKSSWSSKLGKLLARLALLSRDSD 60
Query: 61 LTEESLEAHNKRIREELEQRQLHDKTPKSSPYYRGLTDSSLAINYHHGPLATPGPAHQQL 120
LTEESLEAHNKRI + +KTPKSSPYYRGLTDSSLAINYHHGPL
Sbjct: 61 LTEESLEAHNKRIND----LDTLEKTPKSSPYYRGLTDSSLAINYHHGPLN--------- 120
Query: 121 SGPHYASSSATQVTSFSSIVVSKLKG-WAPCLGKSNDKPAP--------GPDKNNNNNSI 180
S P+ + + + S S +VSK K WAPCL K + P P ++ ++
Sbjct: 121 STPYNVTYATSAAPSTQSSIVSKFKEYWAPCLRKQQQQQQPPHTTPHKVPPRQHQRIQTV 180
Query: 181 IQNIPTVTKTASSSSSKPKPRPKPRPKPEPDPEPEPEPVRRSEEALNISNDDGDHQEKLL 240
+ VTK SS + + D + + R E L +SN G+
Sbjct: 181 TTSTTVVTKATWFSSGSTSASANFKEEMSSDEMMTKKKLLR--ERLVVSN-GGER----- 240
Query: 241 RERSLQSRRGGGG---GEVAEKERYTWGDKYRPKVLEEFICNRRKARQLKEVVREKGCGN 300
R+R S GGGG E EKERY+WGD YRPK LE+FICN++ A +LKE+V+EKGCG+
Sbjct: 241 RDRGGGSGSGGGGVVVVEEMEKERYSWGDNYRPKFLEDFICNKKTAIELKEMVKEKGCGH 300
Query: 301 -YIFEGPPGVGKRTMIRAMLREAFGHQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVE 360
YIFEG PGVGKRTMI+AMLREAFG+Q++EIKEVV+VFDLKSEM+G IEVKV+ESSHYVE
Sbjct: 301 YYIFEGAPGVGKRTMIQAMLREAFGNQSVEIKEVVKVFDLKSEMLGSIEVKVKESSHYVE 360
Query: 361 VNLSQTKGFEKQVIVQLIKETHSPLPCNHSNCQGILLCEAEKLSNETLMYVKWAIERNKG 420
VN+SQTKGFEKQVIVQL+KE+HSPLPCNH+NC+GILLCEA++LSNETLMYVKWAIERNKG
Sbjct: 361 VNMSQTKGFEKQVIVQLMKESHSPLPCNHANCRGILLCEADQLSNETLMYVKWAIERNKG 420
Query: 421 CSKIFFCCSDVSKLLPLTSLCTLIHLSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIADN 480
C+KIFFCC+D SKL L+S+CTL+HLSPPSKQEIVEVLEF+AKQ+GFDLS RLAERIADN
Sbjct: 421 CTKIFFCCTDASKLHLLSSVCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADN 480
Query: 481 SKNNLRQAIRSLEASWNKSQLFEEDENQLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKL 540
SKNNLRQAIRSLEASW KSQLF+EDEN+LLTGWEDDIADVAKKIVEEQSPKQLYIVRGKL
Sbjct: 481 SKNNLRQAIRSLEASWKKSQLFDEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKL 540
Query: 541 KKLIEHDVSPNFIFRTLVDELKKFLDEELQRRIEGLYADYNKIEEKTFVSDQQGNGEEAV 600
KKLIE+DVSPNFIFRTLVDELKKFLDEELQRR+EG YADY K+EEK FVS ++G+GEE V
Sbjct: 541 KKLIEYDVSPNFIFRTLVDELKKFLDEELQRRVEGFYADYYKLEEKAFVS-ERGSGEETV 597
Query: 601 AKVLHDPMRKNVHHFMKIE 606
K +DP+RKNV+HF+KIE
Sbjct: 601 VKGQNDPVRKNVNHFLKIE 597
BLAST of MS005701.1 vs. NCBI nr
Match:
XP_011650816.1 (replication factor C subunit 3 [Cucumis sativus])
HSP 1 Score: 722.6 bits (1864), Expect = 2.8e-204
Identity = 411/617 (66.61%), Postives = 472/617 (76.50%), Query Frame = 0
Query: 10 PSLRRSVSDPRLSRHRRRRR-TFSTTSSKSSWSSKLAKILARLALFSSDSELTEESLEAH 69
PSLRRS+SD R R RRR T STTSSKSSWSSKL K+LARLA S DS+LTEESLEAH
Sbjct: 9 PSLRRSLSDSNHRRRRNRRRATISTTSSKSSWSSKLGKLLARLAFLSRDSDLTEESLEAH 68
Query: 70 NKRIREELEQRQLHDKTPKSSPYYRGLTDSSLAINYHHGPLATPGPAHQQLSGPHYASSS 129
NKRI + DKTPKSSPYYRGLTDSSLAINYHHGPL S P++ + +
Sbjct: 69 NKRIND----LDTLDKTPKSSPYYRGLTDSSLAINYHHGPLN---------STPYHVTYA 128
Query: 130 ATQVTSFSSIVVSKLKGW-APCLGKSN-DKPAPGPDKNNNNNSIIQNIPTVTKTASSSS- 189
+ S S +VSK K + APCL K P P K + IQ + T T + ++
Sbjct: 129 TSAAPSTQSSIVSKFKDYMAPCLRKQQPQSPQTSPRKVPRQHQRIQTVTTATTVVTKATW 188
Query: 190 -SKPKPRPKPRPKPEPDPEPEPEPVRRSEEALNISNDDGDHQEKLLRERSLQSRRGG--- 249
S K E S+D+ ++KLLRER + GG
Sbjct: 189 FSSGSTSASATFKEEMS-----------------SSDEMMTKKKLLRERLVVPNGGGRRD 248
Query: 250 --------GGG----EVAEKERYTWGDKYRPKVLEEFICNRRKARQLKEVVREKGCGN-Y 309
GGG E EKERY+WGD RPKVLE+FICN++ A +LKE+V+EKGCG+ Y
Sbjct: 249 SGGGSGSSGGGVVVVEEMEKERYSWGDSCRPKVLEDFICNKKTAIELKEMVKEKGCGHYY 308
Query: 310 IFEGPPGVGKRTMIRAMLREAFGHQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVN 369
IFEG PGVGKRTMI+AMLR+AFG+Q+MEIKEVV+VFDLKSEM+G IEVKV+ESSHYVEVN
Sbjct: 309 IFEGAPGVGKRTMIQAMLRQAFGNQSMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVN 368
Query: 370 LSQTKGFEKQVIVQLIKETHSPLPCNHSNCQGILLCEAEKLSNETLMYVKWAIERNKGCS 429
+SQTKGFEKQVIVQL+KE+HSPLPCNH+NC+GILLCEA++LS ETLMY+KWA+ER KGCS
Sbjct: 369 MSQTKGFEKQVIVQLMKESHSPLPCNHANCRGILLCEADQLSIETLMYIKWAMERYKGCS 428
Query: 430 KIFFCCSDVSKLLPLTSLCTLIHLSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIADNSK 489
KIFFCCSD SKLL L+SLCTL+ LSPPSKQEIVEVLEF+AKQ+GFDLS RLAERIADNS+
Sbjct: 429 KIFFCCSDASKLLLLSSLCTLVRLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSR 488
Query: 490 NNLRQAIRSLEASWNKSQLFEEDENQLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKK 549
NNLRQAIRSLEASW KSQLF+EDEN+LLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKK
Sbjct: 489 NNLRQAIRSLEASWKKSQLFDEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKK 548
Query: 550 LIEHDVSPNFIFRTLVDELKKFLDEELQRRIEGLYADYNKIEEKTFVSDQQGNGEEAVAK 606
LIE+DVSPNFIFRTLVDELKKFLDEELQRR+EG YADYNK+EEK FVS ++G+GEEAV K
Sbjct: 549 LIEYDVSPNFIFRTLVDELKKFLDEELQRRVEGFYADYNKLEEKVFVS-EKGSGEEAVIK 594
BLAST of MS005701.1 vs. ExPASy Swiss-Prot
Match:
Q8VXX4 (Replication factor C subunit 3 OS=Arabidopsis thaliana OX=3702 GN=RFC3 PE=2 SV=1)
HSP 1 Score: 177.2 bits (448), Expect = 5.7e-43
Identity = 113/315 (35.87%), Postives = 189/315 (60.00%), Query Frame = 0
Query: 254 WGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNYIFEGPPGVGKRTMIRAMLREAFGHQ 313
W DKYRPK L++ I + A++LK++V E+ C + +F GP G GK+T+I A+L++ +G
Sbjct: 3 WVDKYRPKSLDKVIVHEDIAQKLKKLVSEQDCPHLLFYGPSGSGKKTLIMALLKQIYGAS 62
Query: 314 AMEIKEVVRVF--DLKSEMVGRIEVKVRESSHYVEVNLSQTKGFEKQVIVQ-LIKETHSP 373
A ++K R + D S + +E+ S+++VE+ S GF+ + IVQ +IKE
Sbjct: 63 AEKVKVENRAWKVDAGSRTID-LELTTLSSTNHVELTPSDA-GFQDRYIVQEIIKEMAKN 122
Query: 374 LPCNHSNCQG---ILLCEAEKLSNETLMYVKWAIERNKGCSKIFFCCSDVSKLL-PLTSL 433
P + +G ++L E +KLS E ++ +E+ ++ CC+ SK+ + S
Sbjct: 123 RPIDTKGKKGYKVLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAIKSR 182
Query: 434 CTLIHLSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQ 493
C + ++ PS++EIV+VLEFVAK+E L A RIA+ S +LR+AI SLE + Q
Sbjct: 183 CLNVRINAPSQEEIVKVLEFVAKKESLQLPQGFAARIAEKSNRSLRRAILSLETC--RVQ 242
Query: 494 LFEEDENQLLT--GWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLV 553
+ NQ+++ WE+ +A++A +++EQSPK+L+ VRGK+ +L+ + + P I + L+
Sbjct: 243 NYPFTGNQVISPMDWEEYVAEIATDMMKEQSPKKLFQVRGKVYELLVNCIPPEVILKRLL 302
Query: 554 DELKKFLDEELQRRI 560
EL K LD EL+ +
Sbjct: 303 HELLKKLDSELKLEV 313
BLAST of MS005701.1 vs. ExPASy Swiss-Prot
Match:
Q852K3 (Replication factor C subunit 5 OS=Oryza sativa subsp. japonica OX=39947 GN=RFC5 PE=2 SV=1)
HSP 1 Score: 164.9 bits (416), Expect = 2.9e-39
Identity = 101/312 (32.37%), Postives = 175/312 (56.09%), Query Frame = 0
Query: 254 WGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNYIFEGPPGVGKRTMIRAMLREAFGHQ 313
W DKYRPK L++ + + A+ LK++V E+ C + +F GP G GK+T++ A++++ FG
Sbjct: 3 WVDKYRPKTLDKVTVHDQVAQNLKKLVAEQDCPHLLFYGPSGSGKKTLVMALIKQMFGAG 62
Query: 314 AMEIKEVVRVF--DLKSEMVGRIEVKVRESSHYVEVNLSQTKGFEKQVIVQLIKETHSPL 373
A ++K + + D S + IE+ + S+H+VE+N S ++ V+ ++IKE
Sbjct: 63 ADKVKMENKTWKIDTGSRNI-EIELAMLSSAHHVEMNPSDAGFQDRYVVQEVIKEMAKNR 122
Query: 374 PCNHSNCQG---ILLCEAEKLSNETLMYVKWAIERNKGCSKIFFCCSDVSKLL-PLTSLC 433
P + + ++L E +KLS E ++ +E+ ++ CC+ SK+ + S C
Sbjct: 123 PIDAKGKRAFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSRC 182
Query: 434 TLIHLSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQL 493
+ ++ PS+ +IV+VLEF+ K+E L A RIA S NLR+AI E +
Sbjct: 183 LNVRVNAPSEDQIVQVLEFIGKKENLQLPFGFAARIAAQSNRNLRRAILFFETCKVQQYP 242
Query: 494 FEEDENQLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLVDEL 553
F ++ WE ++++A I++EQSPK+L+ VR K +L+ + + P I + L+ EL
Sbjct: 243 FTSNQVAPPLDWEQYVSEIAADIMKEQSPKRLFAVRQKFYELLVNCIPPESILKKLLAEL 302
Query: 554 KKFLDEELQRRI 560
K LD +L+ I
Sbjct: 303 LKKLDSDLKHEI 313
BLAST of MS005701.1 vs. ExPASy Swiss-Prot
Match:
Q54BN3 (Probable replication factor C subunit 3 OS=Dictyostelium discoideum OX=44689 GN=rfc3 PE=3 SV=1)
HSP 1 Score: 158.3 bits (399), Expect = 2.8e-37
Identity = 101/310 (32.58%), Postives = 168/310 (54.19%), Query Frame = 0
Query: 254 WGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNYIFEGPPGVGKRTMIRAMLREAFGHQ 313
W DKY+P L++ + + LK +++ + + GP G GK+T I A+L+E +G
Sbjct: 3 WIDKYKPTSLDKMDYHNDISINLKNMIKSGDFPHLLVYGPSGAGKKTRILAVLQEIYGPN 62
Query: 314 AMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNLSQTKGFEKQVIVQLIKETHSPLPC 373
A+++K R F + I++ S +++E+N + +++ VI +IKE P
Sbjct: 63 ALKLKIDHRTFKHPTSS-KNIQITTISSHYHIEINPGEAGSYDRVVIQTIIKEIAQSPPI 122
Query: 374 NHSNCQG---ILLCEAEKLSNETLMYVKWAIERNKGCSKIFFCCSDVSKLL-PLTSLCTL 433
+ + ++L E +KLS + ++ +E+ ++ CC +K++ P+ S C
Sbjct: 123 DSGSLGAFKIVILNEVDKLSKDAQHALRRTMEKYATFCRLILCCDSTAKVIDPIKSRCLG 182
Query: 434 IHLSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQLFE 493
I + PS++EI +VL VA E FDL ++LA +A S NLR A+ LE+ K F+
Sbjct: 183 IRVPAPSQEEIEKVLAKVATAEKFDLPSKLAVNVAKQSGGNLRYALMLLESQKAKQYPFQ 242
Query: 494 EDENQLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLVDELKK 553
E LL WE+ I+ + K EEQSP +L IVRGKL +L+ H + P IF+TL+ E+ K
Sbjct: 243 STELPLL-DWENYISQIVKDCFEEQSPARLSIVRGKLYELLGHCIPPELIFKTLLLEIFK 302
Query: 554 FLDEELQRRI 560
LD ++ I
Sbjct: 303 KLDHNMKFEI 310
BLAST of MS005701.1 vs. ExPASy Swiss-Prot
Match:
Q8R323 (Replication factor C subunit 3 OS=Mus musculus OX=10090 GN=Rfc3 PE=1 SV=1)
HSP 1 Score: 148.7 bits (374), Expect = 2.2e-34
Identity = 95/320 (29.69%), Postives = 171/320 (53.44%), Query Frame = 0
Query: 254 WGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNY---IFEGPPGVGKRTMIRAMLREAF 313
W DKYRP L ++ +A QL+ +V+ CG++ + GP G GK+T I +LRE +
Sbjct: 4 WVDKYRPSSLARLDYHKEQAAQLRNLVQ---CGDFPHLLVYGPSGAGKKTRIMCILRELY 63
Query: 314 GHQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNLSQTKGFEKQVIVQLIK---ET 373
G +++ + S+ +IE+ S++++EVN S ++ VI +++K ++
Sbjct: 64 GIGVEKLRIEHQTITTPSKK--KIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQS 123
Query: 374 HSPLPCNHSNCQGILLCEAEKLSNETLMYVKWAIERNKGCSKIFFCCSDVSKLL-PLTSL 433
+ + + +LL E +KL+ + ++ +E+ ++ CC+ SK++ P+ S
Sbjct: 124 QQLETSSQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSR 183
Query: 434 CTLIHLSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQ 493
C + + PS ++I VL V ++EG L + LA R+A+ S NLR+A+ EA +
Sbjct: 184 CLAVRVPAPSIEDICSVLSTVCRKEGLALPSTLARRLAEKSCRNLRKALLMCEACRVQQY 243
Query: 494 LFEEDENQLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLVDE 553
F ED+ T WE + + A IV +Q+P++L VRG+L +L+ H + P I + L+ E
Sbjct: 244 PFTEDQEIPETDWEVYLRETANAIVSQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLLSE 303
Query: 554 LKKFLDEELQRRIEGLYADY 567
L D +L+ + + A Y
Sbjct: 304 LLHNCDGQLKGEVAQMAAYY 318
BLAST of MS005701.1 vs. ExPASy Swiss-Prot
Match:
Q2TBV1 (Replication factor C subunit 3 OS=Bos taurus OX=9913 GN=RFC3 PE=2 SV=1)
HSP 1 Score: 148.3 bits (373), Expect = 2.9e-34
Identity = 95/320 (29.69%), Postives = 172/320 (53.75%), Query Frame = 0
Query: 254 WGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNY---IFEGPPGVGKRTMIRAMLREAF 313
W DKYRP L + ++ +A QL+ +V+ CG++ + GP G GK+T I +LRE +
Sbjct: 4 WVDKYRPCSLGQLDYHKEQAAQLRNLVQ---CGDFPHLLVYGPSGAGKKTRIMCILRELY 63
Query: 314 GHQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNLSQTKGFEKQVIVQLIK---ET 373
G +++ + S+ +IE+ S++++EVN S ++ VI +++K ++
Sbjct: 64 GVGVEKLRIEHQTITTPSKK--KIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQS 123
Query: 374 HSPLPCNHSNCQGILLCEAEKLSNETLMYVKWAIERNKGCSKIFFCCSDVSKLL-PLTSL 433
+ + + +LL E +KL+ + ++ +E+ ++ CC+ SK++ P+ S
Sbjct: 124 QQLETSSQKDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSR 183
Query: 434 CTLIHLSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQ 493
C + + PS ++I VL V K+EG +L +LA R+A+ S NLR+A+ EA +
Sbjct: 184 CLAVRVPAPSIEDICHVLSTVCKKEGLNLPPQLAHRLAEKSCRNLRKALLMCEACRVQQY 243
Query: 494 LFEEDENQLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLVDE 553
F D+ T WE + + A IV +Q+P++L VRG+L +L+ H + P I + L+ E
Sbjct: 244 PFTADQEIPETDWEVYLRETANAIVSQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLLSE 303
Query: 554 LKKFLDEELQRRIEGLYADY 567
L D +L+ + + A Y
Sbjct: 304 LLHNCDGQLKGEVAQMAAYY 318
BLAST of MS005701.1 vs. ExPASy TrEMBL
Match:
A0A6J1G337 (replication factor C subunit 3-like OS=Cucurbita moschata OX=3662 GN=LOC111450354 PE=4 SV=1)
HSP 1 Score: 748.8 bits (1932), Expect = 1.8e-212
Identity = 423/616 (68.67%), Postives = 478/616 (77.60%), Query Frame = 0
Query: 5 DNNNNPSLRRSVSDPRLSRHRRRRRTFST--TSSKSSWSSKLAKILARLALFSSDSELTE 64
+++++ SLRRS+SD R +RRR + ST +SSKSSWS+KLAK+LARL LFS +S+LTE
Sbjct: 9 NSSSSSSLRRSLSDSNTRRRQRRRGSISTASSSSKSSWSTKLAKLLARLNLFSRNSDLTE 68
Query: 65 ESLEAHNKRIREELEQRQLHDKTP-KSSPYYRGLTDSSLAINYHHGPLATPGPAHQQLSG 124
ESL+AHN+RI + DKTP KSSPYYRGLTDSSLAINYHHGPL T G
Sbjct: 69 ESLQAHNERIDD-------LDKTPLKSSPYYRGLTDSSLAINYHHGPLTT---------G 128
Query: 125 PHYASSSATQV---TSFSSIVVSKLKGWAPCL-GKSNDKPAPGPDKNNNNNSIIQNIPTV 184
PH+ +SS T TS S VVSKLK WAPCL GK N KP + + +
Sbjct: 129 PHHYASSTTTAQTQTSLSYAVVSKLKEWAPCLIGKPNTKPPAHQQYETPTTTTV--VGKT 188
Query: 185 TKTASSSSSKPKPRPKPRPKPEPDPEPEPEPVRRSEEALNISNDDGDHQEKLLRERSLQ- 244
T A SSS PE + R + +EKLLRER +
Sbjct: 189 TSLAVSSS--------------------PEKIERWAT---------EKEEKLLRERLVMY 248
Query: 245 -SRRGG------GGGEVAEKERYTWGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNYI 304
R GG GGGE AEKERYTWGDKYRPKVLE+FICNR+ A +LK+VV EKGCG+YI
Sbjct: 249 GRREGGSGVGVDGGGEAAEKERYTWGDKYRPKVLEDFICNRKTACELKKVVEEKGCGHYI 308
Query: 305 FEGPPGVGKRTMIRAMLREAFGHQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNL 364
FEGPPGVGKRTMI+AMLR+AFG QAME+KEV RVF LKSEMVG IEVKV+ESSH VEVNL
Sbjct: 309 FEGPPGVGKRTMIQAMLRQAFGEQAMEVKEVDRVFALKSEMVGSIEVKVKESSHCVEVNL 368
Query: 365 SQTKGFEKQVIVQLIKETHSPLPCNHSNCQGILLCEAEKLSNETLMYVKWAIERNKGCSK 424
SQTKGFEKQVI QLIKET SPLPCNH+ C+GILLCEA++LSNETLMYVKWAIERNKGCSK
Sbjct: 369 SQTKGFEKQVIDQLIKETQSPLPCNHARCRGILLCEADQLSNETLMYVKWAIERNKGCSK 428
Query: 425 IFFCCSDVSKLLPLTSLCTLIHLSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIADNSKN 484
IFFCCSDVSKLL L+S CT +HLSPPSKQEIVEVLE++AKQ+ FDLS R+AERIADNSKN
Sbjct: 429 IFFCCSDVSKLLLLSSFCTHVHLSPPSKQEIVEVLEYIAKQQEFDLSRRMAERIADNSKN 488
Query: 485 NLRQAIRSLEASWNKSQLFEEDENQLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKL 544
NLRQAIRSLEASW KS+LFEEDEN+LLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKL
Sbjct: 489 NLRQAIRSLEASWKKSRLFEEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKL 548
Query: 545 IEHDVSPNFIFRTLVDELKKFLDEELQRRIEGLYADYNKIEEKTFVSDQQGNGEEAVAKV 604
IE+DVSPNFIF+TLVDELKKFLDEELQ R+E YADYNK+EEK FV+ ++GNGEEAV K
Sbjct: 549 IEYDVSPNFIFKTLVDELKKFLDEELQHRVESFYADYNKMEEKPFVT-EKGNGEEAVIKE 576
Query: 605 LHDPMRKNVHHFMKIE 606
LHDPMRKNV+HF+KIE
Sbjct: 609 LHDPMRKNVNHFLKIE 576
BLAST of MS005701.1 vs. ExPASy TrEMBL
Match:
A0A6J1IEE5 (replication factor C subunit 3-like OS=Cucurbita maxima OX=3661 GN=LOC111474906 PE=4 SV=1)
HSP 1 Score: 746.1 bits (1925), Expect = 1.1e-211
Identity = 425/617 (68.88%), Postives = 480/617 (77.80%), Query Frame = 0
Query: 7 NNNPSLRRSVSDPRLSRHRRRRRTFST--TSSKSSWSSKLAKILARLALFSSDSELTEES 66
+++ SLRRS+SD R +RR + ST +SSKSSWS+KLAK+LARL LFS +S+LTEES
Sbjct: 11 SSSSSLRRSLSDSNTRRRQRRHWSISTASSSSKSSWSTKLAKLLARLNLFSRNSDLTEES 70
Query: 67 LEAHNKRIREELEQRQLHDKTP-KSSPYYRGLTDSSLAINYHHGPLATPGPAHQQLSGPH 126
L+AHN+RI + DKTP KSSPYYRGLTDSSLAINYHHGPL T H H
Sbjct: 71 LQAHNERIDD-------LDKTPLKSSPYYRGLTDSSLAINYHHGPLTT---THVTTGPHH 130
Query: 127 YASSSAT--QVTSFSSIVVSKLKGWAPCL-GKSNDKPAPGPDKNNNNNSIIQNIPTVTKT 186
YASS+ T TS S VVSKLK WAPCL GK N KP P + + + T +
Sbjct: 131 YASSTTTAQTQTSLSYAVVSKLKEWAPCLIGKPNKKP---PAHHQHETPTTTTVVGKTTS 190
Query: 187 ASSSSSKPKPRPKPRPKPEPDPEPEPEPVRRSEEALNISNDDGDHQEKLLRER-SLQSRR 246
++SSS PE + R + +EKLLRER + RR
Sbjct: 191 LATSSS-------------------PEKIERLAT---------EKEEKLLRERLVMYGRR 250
Query: 247 GG-------GGGEVA----EKERYTWGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNY 306
G GGGE + EKERYTWGDKYRPKVLE+FICNR+ A +LK+VV EKGCG+Y
Sbjct: 251 EGRSGVGVDGGGEASEKEKEKERYTWGDKYRPKVLEDFICNRQTACELKKVVEEKGCGHY 310
Query: 307 IFEGPPGVGKRTMIRAMLREAFGHQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVN 366
IFEGPPGVGKRTMI+AMLR+AFG QAME+KEV RVF LKSEMVG IEVKV+ESSH VEVN
Sbjct: 311 IFEGPPGVGKRTMIQAMLRQAFGEQAMEVKEVGRVFALKSEMVGSIEVKVKESSHCVEVN 370
Query: 367 LSQTKGFEKQVIVQLIKETHSPLPCNHSNCQGILLCEAEKLSNETLMYVKWAIERNKGCS 426
LSQTKGFEKQVI QLIKET SPLPCNH+ C+GILLCEA++LSNETLMYVKWAIERNKGCS
Sbjct: 371 LSQTKGFEKQVIDQLIKETQSPLPCNHARCRGILLCEADQLSNETLMYVKWAIERNKGCS 430
Query: 427 KIFFCCSDVSKLLPLTSLCTLIHLSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIADNSK 486
KIFFCCSDVSKLL L+SLCT +HLSPPSKQEIVEVLE++AKQ+ FDLS R+AERIADNSK
Sbjct: 431 KIFFCCSDVSKLLLLSSLCTHVHLSPPSKQEIVEVLEYIAKQQEFDLSRRMAERIADNSK 490
Query: 487 NNLRQAIRSLEASWNKSQLFEEDENQLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKK 546
NNLRQAIRSLEASW KS+LFEEDEN+LLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKK
Sbjct: 491 NNLRQAIRSLEASWKKSRLFEEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKK 550
Query: 547 LIEHDVSPNFIFRTLVDELKKFLDEELQRRIEGLYADYNKIEEKTFVSDQQGNGEEAVAK 606
LIE+DVSPNFIF+TLVDELKKFLDEELQRR+E YADYNK+EEK FV+D +GNGEEAV K
Sbjct: 551 LIEYDVSPNFIFKTLVDELKKFLDEELQRRVESFYADYNKMEEKPFVTD-KGNGEEAVIK 585
BLAST of MS005701.1 vs. ExPASy TrEMBL
Match:
A0A1S3AWH3 (replication factor C subunit 3-like OS=Cucumis melo OX=3656 GN=LOC103483394 PE=4 SV=1)
HSP 1 Score: 722.6 bits (1864), Expect = 1.4e-204
Identity = 412/619 (66.56%), Postives = 476/619 (76.90%), Query Frame = 0
Query: 1 MANDDNNNNPSLRRSVSDPRLSRHR-RRRRTFSTTSSKSSWSSKLAKILARLALFSSDSE 60
MA PSLRRS+SD R R RRR T STTSSKSSWSSKL K+LARLAL S DS+
Sbjct: 1 MATQQQLQQPSLRRSLSDSNHRRRRSRRRATISTTSSKSSWSSKLGKLLARLALLSRDSD 60
Query: 61 LTEESLEAHNKRIREELEQRQLHDKTPKSSPYYRGLTDSSLAINYHHGPLATPGPAHQQL 120
LTEESLEAHNKRI + +KTPKSSPYYRGLTDSSLAINYHHGPL
Sbjct: 61 LTEESLEAHNKRIND----LDTLEKTPKSSPYYRGLTDSSLAINYHHGPLN--------- 120
Query: 121 SGPHYASSSATQVTSFSSIVVSKLKG-WAPCLGKSNDKPAP--------GPDKNNNNNSI 180
S P+ + + + S S +VSK K WAPCL K + P P ++ ++
Sbjct: 121 STPYNVTYATSAAPSTQSSIVSKFKEYWAPCLRKQQQQQQPPHTTPHKVPPRQHQRIQTV 180
Query: 181 IQNIPTVTKTASSSSSKPKPRPKPRPKPEPDPEPEPEPVRRSEEALNISNDDGDHQEKLL 240
+ VTK SS + + D + + R E L +SN G+
Sbjct: 181 TTSTTVVTKATWFSSGSTSASANFKEEMSSDEMMTKKKLLR--ERLVVSN-GGER----- 240
Query: 241 RERSLQSRRGGGG---GEVAEKERYTWGDKYRPKVLEEFICNRRKARQLKEVVREKGCGN 300
R+R S GGGG E EKERY+WGD YRPK LE+FICN++ A +LKE+V+EKGCG+
Sbjct: 241 RDRGGGSGSGGGGVVVVEEMEKERYSWGDNYRPKFLEDFICNKKTAIELKEMVKEKGCGH 300
Query: 301 -YIFEGPPGVGKRTMIRAMLREAFGHQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVE 360
YIFEG PGVGKRTMI+AMLREAFG+Q++EIKEVV+VFDLKSEM+G IEVKV+ESSHYVE
Sbjct: 301 YYIFEGAPGVGKRTMIQAMLREAFGNQSVEIKEVVKVFDLKSEMLGSIEVKVKESSHYVE 360
Query: 361 VNLSQTKGFEKQVIVQLIKETHSPLPCNHSNCQGILLCEAEKLSNETLMYVKWAIERNKG 420
VN+SQTKGFEKQVIVQL+KE+HSPLPCNH+NC+GILLCEA++LSNETLMYVKWAIERNKG
Sbjct: 361 VNMSQTKGFEKQVIVQLMKESHSPLPCNHANCRGILLCEADQLSNETLMYVKWAIERNKG 420
Query: 421 CSKIFFCCSDVSKLLPLTSLCTLIHLSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIADN 480
C+KIFFCC+D SKL L+S+CTL+HLSPPSKQEIVEVLEF+AKQ+GFDLS RLAERIADN
Sbjct: 421 CTKIFFCCTDASKLHLLSSVCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADN 480
Query: 481 SKNNLRQAIRSLEASWNKSQLFEEDENQLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKL 540
SKNNLRQAIRSLEASW KSQLF+EDEN+LLTGWEDDIADVAKKIVEEQSPKQLYIVRGKL
Sbjct: 481 SKNNLRQAIRSLEASWKKSQLFDEDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKL 540
Query: 541 KKLIEHDVSPNFIFRTLVDELKKFLDEELQRRIEGLYADYNKIEEKTFVSDQQGNGEEAV 600
KKLIE+DVSPNFIFRTLVDELKKFLDEELQRR+EG YADY K+EEK FVS ++G+GEE V
Sbjct: 541 KKLIEYDVSPNFIFRTLVDELKKFLDEELQRRVEGFYADYYKLEEKAFVS-ERGSGEETV 597
Query: 601 AKVLHDPMRKNVHHFMKIE 606
K +DP+RKNV+HF+KIE
Sbjct: 601 VKGQNDPVRKNVNHFLKIE 597
BLAST of MS005701.1 vs. ExPASy TrEMBL
Match:
A0A5A7TZV7 (Replication factor C subunit 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G003010 PE=4 SV=1)
HSP 1 Score: 716.1 bits (1847), Expect = 1.3e-202
Identity = 402/597 (67.34%), Postives = 465/597 (77.89%), Query Frame = 0
Query: 23 RHRRRRRTFSTTSSKSSWSSKLAKILARLALFSSDSELTEESLEAHNKRIREELEQRQLH 82
R RRR T STTSSKSSWSSKL K+LARLAL S DS+LTEESLEAHNKRI +
Sbjct: 10 RRSRRRATISTTSSKSSWSSKLGKLLARLALLSRDSDLTEESLEAHNKRIND----LDTL 69
Query: 83 DKTPKSSPYYRGLTDSSLAINYHHGPLATPGPAHQQLSGPHYASSSATQVTSFSSIVVSK 142
+KTPKSSPYYRGLTDSSLAINYHHGPL S P+ + + + S S +VSK
Sbjct: 70 EKTPKSSPYYRGLTDSSLAINYHHGPLN---------STPYNVTYATSAAPSTQSSIVSK 129
Query: 143 LKG-WAPCLGKSNDKPAP--------GPDKNNNNNSIIQNIPTVTKTASSSSSKPKPRPK 202
K WAPCL K + P P ++ ++ + VTK SS
Sbjct: 130 FKEYWAPCLRKQQQQQQPPHTTPHKVPPRQHQRIQTVTTSTTVVTKATWFSSGSTSASAN 189
Query: 203 PRPKPEPDPEPEPEPVRRSEEALNISNDDGDHQEKLLRERSLQSRRGGGG---GEVAEKE 262
+ + D + + R E L +SN G+ R+R S GGGG E EKE
Sbjct: 190 FKEEMSSDEMMTKKKLLR--ERLVVSN-GGER-----RDRGGGSGSGGGGVVVVEEMEKE 249
Query: 263 RYTWGDKYRPKVLEEFICNRRKARQLKEVVREKGCGN-YIFEGPPGVGKRTMIRAMLREA 322
RY+WGD YRPK LE+FICN++ A +LKE+V+EKGCG+ YIFEG PGVGKRTMI+AMLREA
Sbjct: 250 RYSWGDNYRPKFLEDFICNKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLREA 309
Query: 323 FGHQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNLSQTKGFEKQVIVQLIKETHS 382
FG+Q++EIKEVV+VFDLKSEM+G IEVKV+ESSHYVEVN+SQTKGFEKQVIVQL+KE+HS
Sbjct: 310 FGNQSVEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKESHS 369
Query: 383 PLPCNHSNCQGILLCEAEKLSNETLMYVKWAIERNKGCSKIFFCCSDVSKLLPLTSLCTL 442
PLPCNH+NC+GILLCEA++LSNETLMYVKWAIERNKGC+KIFFCC+D SKL L+S+CTL
Sbjct: 370 PLPCNHANCRGILLCEADQLSNETLMYVKWAIERNKGCTKIFFCCTDASKLHLLSSVCTL 429
Query: 443 IHLSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQLFE 502
+HLSPPSKQEIVEVLEF+AKQ+GFDLS RLAERIADNSKNNLRQAIRSLEASW KSQLF+
Sbjct: 430 VHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLFD 489
Query: 503 EDENQLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLVDELKK 562
EDEN+LLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIE+DVSPNFIFRTLVDELKK
Sbjct: 490 EDENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDELKK 549
Query: 563 FLDEELQRRIEGLYADYNKIEEKTFVSDQQGNGEEAVAKVLHDPMRKNVHHFMKIEG 607
FLDEELQRR+EG YADY K+EEK FVS ++G+GEE V K +DP+RKNV+HF+KIEG
Sbjct: 550 FLDEELQRRVEGFYADYYKLEEKAFVS-ERGSGEETVVKGQNDPVRKNVNHFLKIEG 584
BLAST of MS005701.1 vs. ExPASy TrEMBL
Match:
A0A5D3D1K1 (Replication factor C subunit 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003550 PE=4 SV=1)
HSP 1 Score: 616.7 bits (1589), Expect = 1.0e-172
Identity = 345/535 (64.49%), Postives = 405/535 (75.70%), Query Frame = 0
Query: 85 TPKSSPYYRGLTDSSLAINYHHGPLATPGPAHQQLSGPHYASSSATQVTSFSSIVVSKLK 144
+P +PYYRGLTDSSLAINYHHGPL S P+ + + + S S +VSK K
Sbjct: 13 SPLVTPYYRGLTDSSLAINYHHGPLN---------STPYNVTYATSAAPSTQSSIVSKFK 72
Query: 145 G-WAPCLGKSNDKPAP--------GPDKNNNNNSIIQNIPTVTKTASSSSSKPKPRPKPR 204
WAPCL K + P P ++ ++ + VTK SS +
Sbjct: 73 EYWAPCLRKQQQQQQPPHTTPHKVPPRQHQRIQTVTTSTTVVTKATWFSSGSTSASANFK 132
Query: 205 PKPEPDPEPEPEPVRRSEEALNISNDDGDHQEKLLRERSLQSRRGGGG---GEVAEKERY 264
+ D + + R E L +SN G+ R+R S GGGG E EKERY
Sbjct: 133 EEMSSDEMMTKKKLLR--ERLVVSN-GGER-----RDRGGGSGSGGGGVVVVEEMEKERY 192
Query: 265 TWGDKYRPKVLEEFICNRRKARQLKEVVREKGCGN-YIFEGPPGVGKRTMIRAMLREAFG 324
+WGD YRPK LE+FICN++ A +LKE+V+EKGCG+ YIFEG PGVGKRTMI+AMLREAFG
Sbjct: 193 SWGDNYRPKFLEDFICNKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLREAFG 252
Query: 325 HQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNLSQTKGFEKQVIVQLIKETHSPL 384
+Q++E SEM+G IEVKV+ESSHYVEVN+SQTKGFEKQVIVQL+KE+HSPL
Sbjct: 253 NQSVE-----------SEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKESHSPL 312
Query: 385 PCNHSNCQGILLCEAEKLSNETLMYVKWAIERNKGCSKIFFCCSDVSKLLPLTSLCTLIH 444
PCNH+NC+GI LCEA++LSNETLMYVKWAIERNKGC+KIFFCC+D SKL L+S+CTL+H
Sbjct: 313 PCNHANCRGISLCEADQLSNETLMYVKWAIERNKGCTKIFFCCTDASKLHLLSSVCTLVH 372
Query: 445 LSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQLFEED 504
LSPPSKQEIVEVLEF+AKQ+GFDLS RLAERIADNSKNNLRQAIRSLEASW KSQLF+ED
Sbjct: 373 LSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLFDED 432
Query: 505 ENQLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLVDELKKFL 564
EN+LLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIE+DVSPNFIFRTLVDELKKFL
Sbjct: 433 ENKLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFRTLVDELKKFL 492
Query: 565 DEELQRRIEGLYADYNKIEEKTFVSDQQGNGEEAVAKVLHDPMRKNVHHFMKIEG 607
DEELQRR+EG YADY K+EEK FVS ++G+GEE V K +DP+RKNV+HF+KIEG
Sbjct: 493 DEELQRRVEGFYADYYKLEEKAFVS-ERGSGEETVVKGQNDPVRKNVNHFLKIEG 518
BLAST of MS005701.1 vs. TAIR 10
Match:
AT5G27740.1 (ATPase family associated with various cellular activities (AAA) )
HSP 1 Score: 177.2 bits (448), Expect = 4.1e-44
Identity = 113/315 (35.87%), Postives = 189/315 (60.00%), Query Frame = 0
Query: 254 WGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNYIFEGPPGVGKRTMIRAMLREAFGHQ 313
W DKYRPK L++ I + A++LK++V E+ C + +F GP G GK+T+I A+L++ +G
Sbjct: 3 WVDKYRPKSLDKVIVHEDIAQKLKKLVSEQDCPHLLFYGPSGSGKKTLIMALLKQIYGAS 62
Query: 314 AMEIKEVVRVF--DLKSEMVGRIEVKVRESSHYVEVNLSQTKGFEKQVIVQ-LIKETHSP 373
A ++K R + D S + +E+ S+++VE+ S GF+ + IVQ +IKE
Sbjct: 63 AEKVKVENRAWKVDAGSRTID-LELTTLSSTNHVELTPSDA-GFQDRYIVQEIIKEMAKN 122
Query: 374 LPCNHSNCQG---ILLCEAEKLSNETLMYVKWAIERNKGCSKIFFCCSDVSKLL-PLTSL 433
P + +G ++L E +KLS E ++ +E+ ++ CC+ SK+ + S
Sbjct: 123 RPIDTKGKKGYKVLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAIKSR 182
Query: 434 CTLIHLSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQ 493
C + ++ PS++EIV+VLEFVAK+E L A RIA+ S +LR+AI SLE + Q
Sbjct: 183 CLNVRINAPSQEEIVKVLEFVAKKESLQLPQGFAARIAEKSNRSLRRAILSLETC--RVQ 242
Query: 494 LFEEDENQLLT--GWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLV 553
+ NQ+++ WE+ +A++A +++EQSPK+L+ VRGK+ +L+ + + P I + L+
Sbjct: 243 NYPFTGNQVISPMDWEEYVAEIATDMMKEQSPKKLFQVRGKVYELLVNCIPPEVILKRLL 302
Query: 554 DELKKFLDEELQRRI 560
EL K LD EL+ +
Sbjct: 303 HELLKKLDSELKLEV 313
BLAST of MS005701.1 vs. TAIR 10
Match:
AT1G63160.1 (replication factor C 2 )
HSP 1 Score: 69.7 bits (169), Expect = 9.2e-12
Identity = 73/300 (24.33%), Postives = 124/300 (41.33%), Query Frame = 0
Query: 254 WGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNYIFEGPPGVGKRTMIRAMLREAFGHQ 313
W +KYRP + + + N +L+ + R+ N I GPPG GK T I A+ E G
Sbjct: 17 WVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLG-- 76
Query: 314 AMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNLSQTKGFE--KQVIVQLIKETHSPL 373
KE V +E+N S +G + + I ++ +
Sbjct: 77 -TNYKEAV-----------------------LELNASDDRGIDVVRNKIKMFAQKKVTLP 136
Query: 374 PCNHSNCQGILLCEAEKLSNETLMYVKWAIERNKGCSKIFFCCSDVSKLL-PLTSLCTLI 433
P H + ++L EA+ +++ ++ IE ++ C+ +K++ P+ S C L+
Sbjct: 137 PGRH---KVVILDEADSMTSGAQQALRRTIEIYSNSTRFALACNTSAKIIEPIQSRCALV 196
Query: 434 HLSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIADNSKNNLRQAIRSLEASWNKSQLFEE 493
S S Q+I+ L V E E I + ++RQA+ +L+A+++ F
Sbjct: 197 RFSRLSDQQILGRLLVVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFS-FVN 256
Query: 494 DENQLLTGWEDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEHDVSPNFIFRTLVDELKKF 551
EN + V K IV + I LK+L + SP I TL +K +
Sbjct: 257 QENVFKVCDQPHPLHV-KNIVRNVLESKFDIACDGLKQLYDLGYSPTDIITTLFRIIKNY 285
BLAST of MS005701.1 vs. TAIR 10
Match:
AT1G77470.1 (replication factor C subunit 3 )
HSP 1 Score: 61.2 bits (147), Expect = 3.3e-09
Identity = 57/265 (21.51%), Postives = 118/265 (44.53%), Query Frame = 0
Query: 242 GGGEVAEKERYTWGDKYRPKVLEEFICNRRKARQLKEVVREKGCGNYIFEGPPGVGKRTM 301
G G + + W +KYRP+ L++ +R + + E + + GPPG GK +
Sbjct: 29 GFGPPPQSKATPWVEKYRPQSLDDVAAHRDIIDTIDRLTNENKLPHLLLYGPPGTGKTST 88
Query: 302 IRAMLREAFGHQAMEIKEVVRVFDLKSEMVGRIEVKVRESSHYVEVNLSQTKGFEKQVIV 361
I A+ R+ +G + + +E+N S +G + V+
Sbjct: 89 ILAVARKLYGPKYRNM--------------------------ILELNASDDRGID--VVR 148
Query: 362 QLIKETHS--PLPCNHSNCQGILLCEAEKLSNETLMYVKWAIERNKGCSKIFFCCSDVSK 421
Q I++ S S+ + +LL EA+ ++ + ++ IE+ ++ + V+K
Sbjct: 149 QQIQDFASTQSFSLGKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALIGNHVNK 208
Query: 422 LLP-LTSLCTLIHLSPPSKQEIVEVLEFVAKQEGFDLSTRLAERIADNSKNNLRQAIRSL 481
++P L S CT +P + + L+ V + E +S + S ++R+A+ L
Sbjct: 209 IIPALQSRCTRFRFAPLDGVHMSQRLKHVIEAERLVVSDCGLAALVRLSNGDMRKALNIL 263
Query: 482 EASWNKSQLFEEDENQLLTGWEDDI 504
+++ S+ E+E++ +T E+D+
Sbjct: 269 QSTHMASKEITEEESKQIT--EEDV 263
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAG6597225.1 | 2.1e-212 | 68.67 | Replication factor C subunit 3, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
| XP_022946202.1 | 3.6e-212 | 68.67 | replication factor C subunit 3-like [Cucurbita moschata] | [more] |
| XP_022975501.1 | 2.4e-211 | 68.88 | replication factor C subunit 3-like [Cucurbita maxima] | [more] |
| XP_008438224.1 | 2.8e-204 | 66.56 | PREDICTED: replication factor C subunit 3-like [Cucumis melo] | [more] |
| XP_011650816.1 | 2.8e-204 | 66.61 | replication factor C subunit 3 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Q8VXX4 | 5.7e-43 | 35.87 | Replication factor C subunit 3 OS=Arabidopsis thaliana OX=3702 GN=RFC3 PE=2 SV=1 | [more] |
| Q852K3 | 2.9e-39 | 32.37 | Replication factor C subunit 5 OS=Oryza sativa subsp. japonica OX=39947 GN=RFC5 ... | [more] |
| Q54BN3 | 2.8e-37 | 32.58 | Probable replication factor C subunit 3 OS=Dictyostelium discoideum OX=44689 GN=... | [more] |
| Q8R323 | 2.2e-34 | 29.69 | Replication factor C subunit 3 OS=Mus musculus OX=10090 GN=Rfc3 PE=1 SV=1 | [more] |
| Q2TBV1 | 2.9e-34 | 29.69 | Replication factor C subunit 3 OS=Bos taurus OX=9913 GN=RFC3 PE=2 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1G337 | 1.8e-212 | 68.67 | replication factor C subunit 3-like OS=Cucurbita moschata OX=3662 GN=LOC11145035... | [more] |
| A0A6J1IEE5 | 1.1e-211 | 68.88 | replication factor C subunit 3-like OS=Cucurbita maxima OX=3661 GN=LOC111474906 ... | [more] |
| A0A1S3AWH3 | 1.4e-204 | 66.56 | replication factor C subunit 3-like OS=Cucumis melo OX=3656 GN=LOC103483394 PE=4... | [more] |
| A0A5A7TZV7 | 1.3e-202 | 67.34 | Replication factor C subunit 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6... | [more] |
| A0A5D3D1K1 | 1.0e-172 | 64.49 | Replication factor C subunit 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5... | [more] |
