Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATGGTACCTAAAATCAATCCCTTAACCTATGTCTCTTCCAACTTGACATGTCTATCGCACATAGCGAAGACATGCATTGATATTAAGACAAAACTCACCCCCAAACAGCTTACAATGTTTAGGAAAACTATCTTCGGTCCTTTCCTTGACTTGGACCTCGTATTTAACGGGTCATCGATACACAACCTGTTGTTTAGAGAGGTTGAGGAGAGTAGACCAAACACTATTAACTTCAACCTTTTTGGGAATAAGGTATCTTTTGGTTGGAGAGAGTTTGATATCATCAGTGGCCTAAAATATGCGAGGAATCTAGTTAGGAAAGACACATTTCCTCAAAGACTTGGGACCATGTACTTCAATGATAACGTCGACCTCTTGTTGAGTGATTTGGAGAAGATGTATATAGCCGCACGGTTCGAGGATGACTTTAAGGCGGTTAAGGTATCAACTGTATACTTCGTGGAGCTAGTTTTGTTGGGGGGAGAGAGAAGCCTGAAGTTTGCCATAAGTTTGTTGGGGATAGTGGACGACTGGGAAGTCTATTGCAACTACGACTGGGGTTCATTGTCGTTCGAGAAGACGATAAGTAGTCTACAG
mRNA sequence
ATGGAAATGGTACCTAAAATCAATCCCTTAACCTATGTCTCTTCCAACTTGACATGTCTATCGCACATAGCGAAGACATGCATTGATATTAAGACAAAACTCACCCCCAAACAGCTTACAATGTTTAGGAAAACTATCTTCGGTCCTTTCCTTGACTTGGACCTCGTATTTAACGGGTCATCGATACACAACCTGTTGTTTAGAGAGGTTGAGGAGAGTAGACCAAACACTATTAACTTCAACCTTTTTGGGAATAAGGTATCTTTTGGTTGGAGAGAGTTTGATATCATCAGTGGCCTAAAATATGCGAGGAATCTAGTTAGGAAAGACACATTTCCTCAAAGACTTGGGACCATGTACTTCAATGATAACGTCGACCTCTTGTTGAGTGATTTGGAGAAGATGTATATAGCCGCACGGTTCGAGGATGACTTTAAGGCGGTTAAGGTATCAACTGTATACTTCGTGGAGCTAGTTTTGTTGGGGGGAGAGAGAAGCCTGAAGTTTGCCATAAGTTTGTTGGGGATAGTGGACGACTGGGAAGTCTATTGCAACTACGACTGGGGTTCATTGTCGTTCGAGAAGACGATAAGTAGTCTACAG
Coding sequence (CDS)
ATGGAAATGGTACCTAAAATCAATCCCTTAACCTATGTCTCTTCCAACTTGACATGTCTATCGCACATAGCGAAGACATGCATTGATATTAAGACAAAACTCACCCCCAAACAGCTTACAATGTTTAGGAAAACTATCTTCGGTCCTTTCCTTGACTTGGACCTCGTATTTAACGGGTCATCGATACACAACCTGTTGTTTAGAGAGGTTGAGGAGAGTAGACCAAACACTATTAACTTCAACCTTTTTGGGAATAAGGTATCTTTTGGTTGGAGAGAGTTTGATATCATCAGTGGCCTAAAATATGCGAGGAATCTAGTTAGGAAAGACACATTTCCTCAAAGACTTGGGACCATGTACTTCAATGATAACGTCGACCTCTTGTTGAGTGATTTGGAGAAGATGTATATAGCCGCACGGTTCGAGGATGACTTTAAGGCGGTTAAGGTATCAACTGTATACTTCGTGGAGCTAGTTTTGTTGGGGGGAGAGAGAAGCCTGAAGTTTGCCATAAGTTTGTTGGGGATAGTGGACGACTGGGAAGTCTATTGCAACTACGACTGGGGTTCATTGTCGTTCGAGAAGACGATAAGTAGTCTACAG
Protein sequence
MEMVPKINPLTYVSSNLTCLSHIAKTCIDIKTKLTPKQLTMFRKTIFGPFLDLDLVFNGSSIHNLLFREVEESRPNTINFNLFGNKVSFGWREFDIISGLKYARNLVRKDTFPQRLGTMYFNDNVDLLLSDLEKMYIAARFEDDFKAVKVSTVYFVELVLLGGERSLKFAISLLGIVDDWEVYCNYDWGSLSFEKTISSLQ
Homology
BLAST of MS004706.1 vs. NCBI nr
Match:
XP_022159061.1 (uncharacterized protein LOC111025501 [Momordica charantia])
HSP 1 Score: 261.9 bits (668), Expect = 4.5e-66
Identity = 129/185 (69.73%), Postives = 150/185 (81.08%), Query Frame = 0
Query: 3 MVPKINPLTYVSSNLTCLSHIAKTCIDIKTKLTPKQLTMFRKTIFGPFLDLDLVFNGSSI 62
MVPKI +Y S+NLTCLSH+AKT IK+KLTP QL MFRKT+FG LDLDLVFNG I
Sbjct: 1 MVPKIPSSSYASANLTCLSHLAKTTAAIKSKLTPPQLRMFRKTVFGHLLDLDLVFNGPLI 60
Query: 63 HNLLFREVEESRPNTINFNLFGNKVSFGWREFDIISGLKYARNLVRKDTFPQRLGTMYFN 122
HN+L RE+E S P+TI+FNLFGNK SFG EFDIISGLKY R+ VRKDT P RL +YFN
Sbjct: 61 HNILLREIEXSTPDTISFNLFGNKXSFGRXEFDIISGLKYDRSPVRKDTSPHRLRALYFN 120
Query: 123 DNVDLLLSDLEKMYIAARFEDDFKAVKVSTVYFVELVLLGGERSLKFAISLLGIVDDWEV 182
D+ D+LLS+ EK+Y+AARFEDDF AVK+S VY VELVLLG ER+LK+ +LLGIVDDWE
Sbjct: 121 DSNDVLLSEFEKIYLAARFEDDFDAVKISIVYLVELVLLGRERTLKYDYTLLGIVDDWET 180
Query: 183 YCNYD 188
CN+D
Sbjct: 181 CCNHD 185
BLAST of MS004706.1 vs. NCBI nr
Match:
XP_022159253.1 (uncharacterized protein LOC111025666 [Momordica charantia] >XP_022159254.1 uncharacterized protein LOC111025667 [Momordica charantia])
HSP 1 Score: 258.8 bits (660), Expect = 3.8e-65
Identity = 132/200 (66.00%), Postives = 157/200 (78.50%), Query Frame = 0
Query: 3 MVPKINPLTYVSSNLTCLSHIAKTCIDIKTKLTPKQLTMFRKTIFGPFLDLDLVFNGSSI 62
MV KI P + S+NLT LSH+AKT IK+KLTP QL+MFRKT+FG LDLDLVFN S I
Sbjct: 1 MVAKIPPSSNASANLTYLSHLAKTTTAIKSKLTPPQLSMFRKTVFGHLLDLDLVFNVSLI 60
Query: 63 HNLLFREVEE-SRPNTINFNLFGNKVSFGWREFDIISGLKYARNLVRKDTFPQRLGTMYF 122
H +L RE+E+ S PNTI+FNLFG+KV F REFDIISGLKY R+ VRKDT P RL +YF
Sbjct: 61 HKILLREIEDSSTPNTISFNLFGSKVLFRRREFDIISGLKYDRSPVRKDTSPHRLRALYF 120
Query: 123 NDNVDLLLSDLEKMYIAARFEDDFKAVKVSTVYFVELVLLGGERSLKFAISLLGIVDDWE 182
ND+ D+LLSD EK+YI RFEDDF A K+S VY +ELVLLG ER+LK+ +LLGIVDD E
Sbjct: 121 NDSNDILLSDFEKIYIVTRFEDDFDAAKISIVYLMELVLLGRERTLKYDYTLLGIVDDCE 180
Query: 183 VYCNYDWGSLSFEKTISSLQ 202
CN+DWG +SF+KTI SL+
Sbjct: 181 TCCNHDWGMMSFDKTIYSLK 200
BLAST of MS004706.1 vs. NCBI nr
Match:
XP_022158083.1 (uncharacterized protein LOC111024651 [Momordica charantia])
HSP 1 Score: 251.9 bits (642), Expect = 4.6e-63
Identity = 124/187 (66.31%), Postives = 149/187 (79.68%), Query Frame = 0
Query: 1 MEMVPKINPLTYVSSNLTCLSHIAKTCIDIKTKLTPKQLTMFRKTIFGPFLDLDLVFNGS 60
ME+ PKI+P Y S+N++CLSH+AKT IK KL P+QL MFRKTIF LD+DLVFNG
Sbjct: 1 MELRPKIDPAIYASANVSCLSHLAKTVTAIKGKLAPRQLAMFRKTIFSHLLDVDLVFNGP 60
Query: 61 SIHNLLFREVEESRPNTINFNLFGNKVSFGWREFDIISGLKYARNLVRKDTFPQRLGTMY 120
+HN+L REVE+S ++I+FNLFG KVSFG REFD+ISGLKY +LVRKDT RL +Y
Sbjct: 61 LVHNILLREVEDSTTDSISFNLFGRKVSFGRREFDLISGLKYDGSLVRKDTHVHRLRALY 120
Query: 121 FNDNVDLLLSDLEKMYIAARFEDDFKAVKVSTVYFVELVLLGGERSLKFAISLLGIVDDW 180
FND DL+LSDLE +Y AA+F+DDF AVKVS VY VE+VLLG ER++KF +LLGIVDDW
Sbjct: 121 FNDRSDLVLSDLEDLYEAAQFQDDFDAVKVSIVYMVEMVLLGRERTVKFDQTLLGIVDDW 180
Query: 181 EVYCNYD 188
EV CNYD
Sbjct: 181 EVCCNYD 187
BLAST of MS004706.1 vs. NCBI nr
Match:
XP_022141672.1 (uncharacterized protein LOC111011977 [Momordica charantia])
HSP 1 Score: 248.1 bits (632), Expect = 6.7e-62
Identity = 122/201 (60.70%), Postives = 153/201 (76.12%), Query Frame = 0
Query: 1 MEMVPKINPLTYVSSNLTCLSHIAKTCIDIKTKLTPKQLTMFRKTIFGPFLDLDLVFNGS 60
MEMVPKI P +Y SSNLTCLSHI T IK+KLTP+QL+MFRKTIFG LD++LV NG
Sbjct: 1 MEMVPKIPPSSYRSSNLTCLSHIGSTVKAIKSKLTPRQLSMFRKTIFGHLLDVELVLNGP 60
Query: 61 SIHNLLFREVEESRPNTINFNLFGNKVSFGWREFDIISGLKYARNLVRKDTFPQRLGTMY 120
+HNLL RE+E SR + I ++ GN+VSFG+ EF +I+GLK +R +RKDT P+RL +Y
Sbjct: 61 LLHNLLLRELENSRADVITMDVLGNRVSFGFSEFCLITGLKDSRRPIRKDTSPKRLRKLY 120
Query: 121 FNDNVDLLLSDLEKMYIAARFEDDFKAVKVSTVYFVELVLLGGERSLKFAISLLGIVDDW 180
F+D VD+LLS+ E Y+ +FEDD AVK+S + FVELVL G +R+LK SLLG+VDD
Sbjct: 121 FDDKVDILLSEFEARYMVMQFEDDIDAVKISMLLFVELVLFGKDRTLKLDNSLLGVVDDL 180
Query: 181 EVYCNYDWGSLSFEKTISSLQ 202
EV CNYDW +SFEKTI SL+
Sbjct: 181 EVCCNYDWAEMSFEKTIKSLK 201
BLAST of MS004706.1 vs. NCBI nr
Match:
XP_022158744.1 (uncharacterized protein LOC111025209 [Momordica charantia])
HSP 1 Score: 242.3 bits (617), Expect = 3.7e-60
Identity = 130/199 (65.33%), Postives = 144/199 (72.36%), Query Frame = 0
Query: 3 MVPKINPLTYVSSNLTCLSHIAKTCIDIKTKLTPKQLTMFRKTIFGPFLDLDLVFNGSSI 62
M+PKI+P TY S+ L CLSHIAKT DIKTKLTPKQL MFRKTIF LD+DLVFNG
Sbjct: 1 MIPKIDPATYASAKLNCLSHIAKTSNDIKTKLTPKQLAMFRKTIFSHLLDVDLVFNGP-- 60
Query: 63 HNLLFREVEESRPNTINFNLFGNKVSFGWREFDIISGLKYARNLVRKDTFPQRLGTMYFN 122
L G KVSFG REFDIISGLKY+R+ VRK T+PQR GT+YFN
Sbjct: 61 -------------------LLGTKVSFGRREFDIISGLKYSRSPVRKITYPQRHGTLYFN 120
Query: 123 DNVDLLLSDLEKMYIAARFEDDFKAVKVSTVYFVELVLLGGERSLKFAISLLGIVDDWEV 182
++ DLLLS+LEKMY + RFEDD AVKV VYFVELVLLG ERS KF LLGIVDDWE
Sbjct: 121 NSTDLLLSELEKMYTSIRFEDDIDAVKV-LVYFVELVLLGRERSTKFDHILLGIVDDWEA 177
Query: 183 YCNYDWGSLSFEKTISSLQ 202
CN+DW LSF+KTI SLQ
Sbjct: 181 CCNHDWALLSFDKTIYSLQ 177
BLAST of MS004706.1 vs. ExPASy TrEMBL
Match:
A0A6J1E2S4 (uncharacterized protein LOC111025501 OS=Momordica charantia OX=3673 GN=LOC111025501 PE=4 SV=1)
HSP 1 Score: 261.9 bits (668), Expect = 2.2e-66
Identity = 129/185 (69.73%), Postives = 150/185 (81.08%), Query Frame = 0
Query: 3 MVPKINPLTYVSSNLTCLSHIAKTCIDIKTKLTPKQLTMFRKTIFGPFLDLDLVFNGSSI 62
MVPKI +Y S+NLTCLSH+AKT IK+KLTP QL MFRKT+FG LDLDLVFNG I
Sbjct: 1 MVPKIPSSSYASANLTCLSHLAKTTAAIKSKLTPPQLRMFRKTVFGHLLDLDLVFNGPLI 60
Query: 63 HNLLFREVEESRPNTINFNLFGNKVSFGWREFDIISGLKYARNLVRKDTFPQRLGTMYFN 122
HN+L RE+E S P+TI+FNLFGNK SFG EFDIISGLKY R+ VRKDT P RL +YFN
Sbjct: 61 HNILLREIEXSTPDTISFNLFGNKXSFGRXEFDIISGLKYDRSPVRKDTSPHRLRALYFN 120
Query: 123 DNVDLLLSDLEKMYIAARFEDDFKAVKVSTVYFVELVLLGGERSLKFAISLLGIVDDWEV 182
D+ D+LLS+ EK+Y+AARFEDDF AVK+S VY VELVLLG ER+LK+ +LLGIVDDWE
Sbjct: 121 DSNDVLLSEFEKIYLAARFEDDFDAVKISIVYLVELVLLGRERTLKYDYTLLGIVDDWET 180
Query: 183 YCNYD 188
CN+D
Sbjct: 181 CCNHD 185
BLAST of MS004706.1 vs. ExPASy TrEMBL
Match:
A0A6J1DYB1 (uncharacterized protein LOC111025666 OS=Momordica charantia OX=3673 GN=LOC111025666 PE=4 SV=1)
HSP 1 Score: 258.8 bits (660), Expect = 1.8e-65
Identity = 132/200 (66.00%), Postives = 157/200 (78.50%), Query Frame = 0
Query: 3 MVPKINPLTYVSSNLTCLSHIAKTCIDIKTKLTPKQLTMFRKTIFGPFLDLDLVFNGSSI 62
MV KI P + S+NLT LSH+AKT IK+KLTP QL+MFRKT+FG LDLDLVFN S I
Sbjct: 1 MVAKIPPSSNASANLTYLSHLAKTTTAIKSKLTPPQLSMFRKTVFGHLLDLDLVFNVSLI 60
Query: 63 HNLLFREVEE-SRPNTINFNLFGNKVSFGWREFDIISGLKYARNLVRKDTFPQRLGTMYF 122
H +L RE+E+ S PNTI+FNLFG+KV F REFDIISGLKY R+ VRKDT P RL +YF
Sbjct: 61 HKILLREIEDSSTPNTISFNLFGSKVLFRRREFDIISGLKYDRSPVRKDTSPHRLRALYF 120
Query: 123 NDNVDLLLSDLEKMYIAARFEDDFKAVKVSTVYFVELVLLGGERSLKFAISLLGIVDDWE 182
ND+ D+LLSD EK+YI RFEDDF A K+S VY +ELVLLG ER+LK+ +LLGIVDD E
Sbjct: 121 NDSNDILLSDFEKIYIVTRFEDDFDAAKISIVYLMELVLLGRERTLKYDYTLLGIVDDCE 180
Query: 183 VYCNYDWGSLSFEKTISSLQ 202
CN+DWG +SF+KTI SL+
Sbjct: 181 TCCNHDWGMMSFDKTIYSLK 200
BLAST of MS004706.1 vs. ExPASy TrEMBL
Match:
A0A6J1DV44 (uncharacterized protein LOC111024651 OS=Momordica charantia OX=3673 GN=LOC111024651 PE=4 SV=1)
HSP 1 Score: 251.9 bits (642), Expect = 2.2e-63
Identity = 124/187 (66.31%), Postives = 149/187 (79.68%), Query Frame = 0
Query: 1 MEMVPKINPLTYVSSNLTCLSHIAKTCIDIKTKLTPKQLTMFRKTIFGPFLDLDLVFNGS 60
ME+ PKI+P Y S+N++CLSH+AKT IK KL P+QL MFRKTIF LD+DLVFNG
Sbjct: 1 MELRPKIDPAIYASANVSCLSHLAKTVTAIKGKLAPRQLAMFRKTIFSHLLDVDLVFNGP 60
Query: 61 SIHNLLFREVEESRPNTINFNLFGNKVSFGWREFDIISGLKYARNLVRKDTFPQRLGTMY 120
+HN+L REVE+S ++I+FNLFG KVSFG REFD+ISGLKY +LVRKDT RL +Y
Sbjct: 61 LVHNILLREVEDSTTDSISFNLFGRKVSFGRREFDLISGLKYDGSLVRKDTHVHRLRALY 120
Query: 121 FNDNVDLLLSDLEKMYIAARFEDDFKAVKVSTVYFVELVLLGGERSLKFAISLLGIVDDW 180
FND DL+LSDLE +Y AA+F+DDF AVKVS VY VE+VLLG ER++KF +LLGIVDDW
Sbjct: 121 FNDRSDLVLSDLEDLYEAAQFQDDFDAVKVSIVYMVEMVLLGRERTVKFDQTLLGIVDDW 180
Query: 181 EVYCNYD 188
EV CNYD
Sbjct: 181 EVCCNYD 187
BLAST of MS004706.1 vs. ExPASy TrEMBL
Match:
A0A6J1CKH8 (uncharacterized protein LOC111011977 OS=Momordica charantia OX=3673 GN=LOC111011977 PE=4 SV=1)
HSP 1 Score: 248.1 bits (632), Expect = 3.2e-62
Identity = 122/201 (60.70%), Postives = 153/201 (76.12%), Query Frame = 0
Query: 1 MEMVPKINPLTYVSSNLTCLSHIAKTCIDIKTKLTPKQLTMFRKTIFGPFLDLDLVFNGS 60
MEMVPKI P +Y SSNLTCLSHI T IK+KLTP+QL+MFRKTIFG LD++LV NG
Sbjct: 1 MEMVPKIPPSSYRSSNLTCLSHIGSTVKAIKSKLTPRQLSMFRKTIFGHLLDVELVLNGP 60
Query: 61 SIHNLLFREVEESRPNTINFNLFGNKVSFGWREFDIISGLKYARNLVRKDTFPQRLGTMY 120
+HNLL RE+E SR + I ++ GN+VSFG+ EF +I+GLK +R +RKDT P+RL +Y
Sbjct: 61 LLHNLLLRELENSRADVITMDVLGNRVSFGFSEFCLITGLKDSRRPIRKDTSPKRLRKLY 120
Query: 121 FNDNVDLLLSDLEKMYIAARFEDDFKAVKVSTVYFVELVLLGGERSLKFAISLLGIVDDW 180
F+D VD+LLS+ E Y+ +FEDD AVK+S + FVELVL G +R+LK SLLG+VDD
Sbjct: 121 FDDKVDILLSEFEARYMVMQFEDDIDAVKISMLLFVELVLFGKDRTLKLDNSLLGVVDDL 180
Query: 181 EVYCNYDWGSLSFEKTISSLQ 202
EV CNYDW +SFEKTI SL+
Sbjct: 181 EVCCNYDWAEMSFEKTIKSLK 201
BLAST of MS004706.1 vs. ExPASy TrEMBL
Match:
A0A6J1E0A9 (uncharacterized protein LOC111025209 OS=Momordica charantia OX=3673 GN=LOC111025209 PE=4 SV=1)
HSP 1 Score: 242.3 bits (617), Expect = 1.8e-60
Identity = 130/199 (65.33%), Postives = 144/199 (72.36%), Query Frame = 0
Query: 3 MVPKINPLTYVSSNLTCLSHIAKTCIDIKTKLTPKQLTMFRKTIFGPFLDLDLVFNGSSI 62
M+PKI+P TY S+ L CLSHIAKT DIKTKLTPKQL MFRKTIF LD+DLVFNG
Sbjct: 1 MIPKIDPATYASAKLNCLSHIAKTSNDIKTKLTPKQLAMFRKTIFSHLLDVDLVFNGP-- 60
Query: 63 HNLLFREVEESRPNTINFNLFGNKVSFGWREFDIISGLKYARNLVRKDTFPQRLGTMYFN 122
L G KVSFG REFDIISGLKY+R+ VRK T+PQR GT+YFN
Sbjct: 61 -------------------LLGTKVSFGRREFDIISGLKYSRSPVRKITYPQRHGTLYFN 120
Query: 123 DNVDLLLSDLEKMYIAARFEDDFKAVKVSTVYFVELVLLGGERSLKFAISLLGIVDDWEV 182
++ DLLLS+LEKMY + RFEDD AVKV VYFVELVLLG ERS KF LLGIVDDWE
Sbjct: 121 NSTDLLLSELEKMYTSIRFEDDIDAVKV-LVYFVELVLLGRERSTKFDHILLGIVDDWEA 177
Query: 183 YCNYDWGSLSFEKTISSLQ 202
CN+DW LSF+KTI SLQ
Sbjct: 181 CCNHDWALLSFDKTIYSLQ 177
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022159061.1 | 4.5e-66 | 69.73 | uncharacterized protein LOC111025501 [Momordica charantia] | [more] |
XP_022159253.1 | 3.8e-65 | 66.00 | uncharacterized protein LOC111025666 [Momordica charantia] >XP_022159254.1 uncha... | [more] |
XP_022158083.1 | 4.6e-63 | 66.31 | uncharacterized protein LOC111024651 [Momordica charantia] | [more] |
XP_022141672.1 | 6.7e-62 | 60.70 | uncharacterized protein LOC111011977 [Momordica charantia] | [more] |
XP_022158744.1 | 3.7e-60 | 65.33 | uncharacterized protein LOC111025209 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1E2S4 | 2.2e-66 | 69.73 | uncharacterized protein LOC111025501 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
A0A6J1DYB1 | 1.8e-65 | 66.00 | uncharacterized protein LOC111025666 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
A0A6J1DV44 | 2.2e-63 | 66.31 | uncharacterized protein LOC111024651 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
A0A6J1CKH8 | 3.2e-62 | 60.70 | uncharacterized protein LOC111011977 OS=Momordica charantia OX=3673 GN=LOC111011... | [more] |
A0A6J1E0A9 | 1.8e-60 | 65.33 | uncharacterized protein LOC111025209 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
Match Name | E-value | Identity | Description | |