MS002793.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS002793.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1
Location	scaffold66: 631938 .. 634170 (+)
Sequence length	885
RNA-Seq Expression	MS002793.1
Synteny	MS002793.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATGCAATGCTTGCTGGAGAGAACTTGAAGGCCGAGCTATCTCGACAACTTGTGGTCACCTGTTGTGTATCCTAAGCTTGTAAAAAAATTTCATTTTGTATCGTTTAATTTGGTGAATATTTACCTGGCATGTTATTAGTAAATGTACGTGGTTTTGTTGCATAATTGTTCCTTAACGGTGTAAAGGCCAAGAAGATGCGAGCAAGATCCTTGGCAATGATGGAGCATGCCCAATTTGTGATCAAGTTCTTTCTAAAAGGTGAAGAGTTTTGTTATTATGACCCTTTCAAGTCTCAGCATTGCTCAACTGTTGTTCTCTTCAAACAAGGGTTGATTTTACACCAGTTGCAAGGTTGAAGAAAAACAGAAATGTAATTTTATCAATAGCATGTTAGAAATCTCTAAGAGGACCCATCAGCAGATGTACCAGTCATATCAACTTCTTAGTAAATTTATTATCACCATATGGACAACTATTTTTTCCATGGATTTACAGGTACACAGACAATATGATTTTATCTTCTCTTACATGCTTCCTATTTCTGTTTGGCAGTCTCATGAAACCTGTGGACATCAATCCAAATGATGAATGGGTAAATGTAAGTATTTTCTTCAAAGGATTGCATTTAGCCTGCCTACCTAAGTTCAATTTTCAACCTTTTCCTTGTATGACTTTTCTGTTTCCTTGAATTATCCCGCTGGTTTTGCTGCTGATTTTCACAAAACAAAATATTGCAGATGGCCATGGCTGGTATATCTCCTCAGATTTGTATCCTTCGAAATGATCACGAATGATTCAAAATTATAATATTATGTTATAACAATATGAAATATAGATTGTTTCAATCTTCCTTGACTGATTCCAGTAATGAAAAGTGCATATAGAAGTGTAATGTTCTATATTGGACAAAAGGAATTGGAAATGCAGTACAAAATGAACAGAATCGTGGCTCAATGCCGGCAGAAATGTGAGGTTATGCAAGAAAAGTTTACCGAGAAACTGGAGCAGGTGCATACTGCATACCAAAAAATGGCCAAGAGATGCCAGATGATGGAGCGAGAGATGGAGAATTTAACCAAGGACAAACAAGAGCTCCAGGAGAAGTTTGCTGAAAAATCCAGGTCATTTTCTTTCATTTTTGCTTCCGATTTCTTAACTAGTTCCAGATGGGTTTTTAAGATCCTGATCCAGAATACTCGTTTGCATGTTAGGCAGAAGAGGAAACTAGATGAAATGTATGATCAATTGAGGAATGATCATGAATCACTAAAACGTTCTGCCATCCAGCCTGTGAGCAATTTTTATCCAAGAAATGAGCCTGATTTGTTCTCAAACCCTGTTAATATGATGGATAGCAGAGAACCCATGAGGAAAGGTAATCTTTTTCTCTTTCTAGTCTTATAGAATTGAAACCTTAAACATTTGATGCTTTCATGATATTGAGATTTCTATTTATATTATGGGTATTATTATTTAGCTTTCAAAAAATAGTCCAGAACTCTGCCTTTAGTTTCAAAAATATCCCTAAACTTTGTCCTTAGTTTAAAAAATACTCCTACTATTTCAAAAGTTTCAATACGGTCCTTGACCTTTCAAAACATTTCAATAATATCGAGCAAACGTCCGTTAATATTTTTAATGGAAAGTTGATCTAAGAGAATCTGGAACAACATGACAATAAACGTGGAAGTTTCTTCCATATTTCCTCTCTTTTCAACCTAAAAGTTTTATTCCCCCATTGAGTTTTGCTTCTCCATTATCTACCTAATTTTGTCATAATCCCCTTTTAAAAACAATAACTTCTCCCACGTTTTCTCTATTTTCAGACTTAACCTATGCAAGCTTTCACGTTTATTGTCGCGTCGTTTTAGATTCTACTGCATCAACTTTCCGTTCAAAATATTAACAGATGTTTGCTCATCGTATTTCCAAAACAAGTTGACTTATTTCTTGCAGACTGGCTGGTGTCCGCTCCTGAAACCCCAGGACCAAGAGAGGAAATATGGCCAGCAAGACAGAATAGCGGGAACTCTGGTGGTCACTTCGACATTTCCGTTGGGTCACCTCCGAAACAAGCTCCTCCAATGGCAATGGAAGCTGGAAACAGAAGAGCTGGAGCTCACACTGCGTTTGGAACTGGAGCTGCCAACCCCTCCATGACTCTACGCAACTTGATTCTGTCCCCAATCAAACGACCTCAGCTCTCTCGTCGCCCTCAAATGTTCACG

mRNA sequence

ATGAAATGCAATGCTTGCTGGAGAGAACTTGAAGGCCGAGCTATCTCGACAACTTGTGGTCACCTGTTGTGCCAAGAAGATGCGAGCAAGATCCTTGGCAATGATGGAGCATGCCCAATTTGTGATCAAGTTCTTTCTAAAAGTCTCATGAAACCTGTGGACATCAATCCAAATGATGAATGGGTAAATGTAATAATGAAAAGTGCATATAGAAGTGTAATGTTCTATATTGGACAAAAGGAATTGGAAATGCAGTACAAAATGAACAGAATCGTGGCTCAATGCCGGCAGAAATGTGAGGTTATGCAAGAAAAGTTTACCGAGAAACTGGAGCAGGTGCATACTGCATACCAAAAAATGGCCAAGAGATGCCAGATGATGGAGCGAGAGATGGAGAATTTAACCAAGGACAAACAAGAGCTCCAGGAGAAGTTTGCTGAAAAATCCAGGCAGAAGAGGAAACTAGATGAAATGTATGATCAATTGAGGAATGATCATGAATCACTAAAACGTTCTGCCATCCAGCCTGTGAGCAATTTTTATCCAAGAAATGAGCCTGATTTGTTCTCAAACCCTGTTAATATGATGGATAGCAGAGAACCCATGAGGAAAGACTGGCTGGTGTCCGCTCCTGAAACCCCAGGACCAAGAGAGGAAATATGGCCAGCAAGACAGAATAGCGGGAACTCTGGTGGTCACTTCGACATTTCCGTTGGGTCACCTCCGAAACAAGCTCCTCCAATGGCAATGGAAGCTGGAAACAGAAGAGCTGGAGCTCACACTGCGTTTGGAACTGGAGCTGCCAACCCCTCCATGACTCTACGCAACTTGATTCTGTCCCCAATCAAACGACCTCAGCTCTCTCGTCGCCCTCAAATGTTCACG

Coding sequence (CDS)

ATGAAATGCAATGCTTGCTGGAGAGAACTTGAAGGCCGAGCTATCTCGACAACTTGTGGTCACCTGTTGTGCCAAGAAGATGCGAGCAAGATCCTTGGCAATGATGGAGCATGCCCAATTTGTGATCAAGTTCTTTCTAAAAGTCTCATGAAACCTGTGGACATCAATCCAAATGATGAATGGGTAAATGTAATAATGAAAAGTGCATATAGAAGTGTAATGTTCTATATTGGACAAAAGGAATTGGAAATGCAGTACAAAATGAACAGAATCGTGGCTCAATGCCGGCAGAAATGTGAGGTTATGCAAGAAAAGTTTACCGAGAAACTGGAGCAGGTGCATACTGCATACCAAAAAATGGCCAAGAGATGCCAGATGATGGAGCGAGAGATGGAGAATTTAACCAAGGACAAACAAGAGCTCCAGGAGAAGTTTGCTGAAAAATCCAGGCAGAAGAGGAAACTAGATGAAATGTATGATCAATTGAGGAATGATCATGAATCACTAAAACGTTCTGCCATCCAGCCTGTGAGCAATTTTTATCCAAGAAATGAGCCTGATTTGTTCTCAAACCCTGTTAATATGATGGATAGCAGAGAACCCATGAGGAAAGACTGGCTGGTGTCCGCTCCTGAAACCCCAGGACCAAGAGAGGAAATATGGCCAGCAAGACAGAATAGCGGGAACTCTGGTGGTCACTTCGACATTTCCGTTGGGTCACCTCCGAAACAAGCTCCTCCAATGGCAATGGAAGCTGGAAACAGAAGAGCTGGAGCTCACACTGCGTTTGGAACTGGAGCTGCCAACCCCTCCATGACTCTACGCAACTTGATTCTGTCCCCAATCAAACGACCTCAGCTCTCTCGTCGCCCTCAAATGTTCACG

Protein sequence

MKCNACWRELEGRAISTTCGHLLCQEDASKILGNDGACPICDQVLSKSLMKPVDINPNDEWVNVIMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLEQVHTAYQKMAKRCQMMEREMENLTKDKQELQEKFAEKSRQKRKLDEMYDQLRNDHESLKRSAIQPVSNFYPRNEPDLFSNPVNMMDSREPMRKDWLVSAPETPGPREEIWPARQNSGNSGGHFDISVGSPPKQAPPMAMEAGNRRAGAHTAFGTGAANPSMTLRNLILSPIKRPQLSRRPQMFT

Homology

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BLAST of MS002793.1 vs. NCBI nr
Match: XP_022142839.1 (E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X2 [Momordica charantia])

HSP 1 Score: 584.3 bits (1505), Expect = 5.7e-163
Identity = 293/304 (96.38%), Postives = 295/304 (97.04%), Query Frame = 0


Query: 1   MKCNACWRELEGRAISTTCGHLLCQEDASKILGNDGACPICDQVLSKSLMKPVDINPNDE 60
           MKCNACWRELEGRAISTTCGHLLCQEDASKILGNDGACPICDQVLSKSLMKPVDINPNDE
Sbjct: 1   MKCNACWRELEGRAISTTCGHLLCQEDASKILGNDGACPICDQVLSKSLMKPVDINPNDE 60

Query: 61  WVN---------VIMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE 120
           WVN         ++MKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE
Sbjct: 61  WVNMAMAGISPQILMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE 120

Query: 121 QVHTAYQKMAKRCQMMEREMENLTKDKQELQEKFAEKSRQKRKLDEMYDQLRNDHESLKR 180
           QVHTAYQKMAKRCQMMEREMENLTKDKQELQEKFAEKSRQKRKLDEMYDQLRNDHESLKR
Sbjct: 121 QVHTAYQKMAKRCQMMEREMENLTKDKQELQEKFAEKSRQKRKLDEMYDQLRNDHESLKR 180

Query: 181 SAIQPVSNFYPRNEPDLFSNPVNMMDSREPMRKDWLVSAPETPGPREEIWPARQNSGNSG 240
           SAIQPVSNFYPRNEPDLFSNPVNMMDSREPMRKDWLVSAPETPGPREEIWPARQNSGNSG
Sbjct: 181 SAIQPVSNFYPRNEPDLFSNPVNMMDSREPMRKDWLVSAPETPGPREEIWPARQNSGNSG 240

Query: 241 GHFDISVGSPPKQAPPMAMEAGNRRAGAHTAFGTGAANPSMTLRNLILSPIKRPQLSRRP 296
           GHFDISVGSPPKQAPPMAMEAGNRRAGAHTAFGTGAANPSMTLRNLILSPIKRPQLSRRP
Sbjct: 241 GHFDISVGSPPKQAPPMAMEAGNRRAGAHTAFGTGAANPSMTLRNLILSPIKRPQLSRRP 300

[Close]

BLAST of MS002793.1 vs. NCBI nr
Match: XP_022142833.1 (E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 [Momordica charantia] >XP_022142834.1 E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 [Momordica charantia] >XP_022142835.1 E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 [Momordica charantia] >XP_022142836.1 E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 [Momordica charantia] >XP_022142837.1 E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 [Momordica charantia] >XP_022142838.1 E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 [Momordica charantia])

HSP 1 Score: 584.3 bits (1505), Expect = 5.7e-163
Identity = 293/304 (96.38%), Postives = 295/304 (97.04%), Query Frame = 0


Query: 1   MKCNACWRELEGRAISTTCGHLLCQEDASKILGNDGACPICDQVLSKSLMKPVDINPNDE 60
           MKCNACWRELEGRAISTTCGHLLCQEDASKILGNDGACPICDQVLSKSLMKPVDINPNDE
Sbjct: 1   MKCNACWRELEGRAISTTCGHLLCQEDASKILGNDGACPICDQVLSKSLMKPVDINPNDE 60

Query: 61  WVN---------VIMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE 120
           WVN         ++MKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE
Sbjct: 61  WVNMAMAGISPQILMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE 120

Query: 121 QVHTAYQKMAKRCQMMEREMENLTKDKQELQEKFAEKSRQKRKLDEMYDQLRNDHESLKR 180
           QVHTAYQKMAKRCQMMEREMENLTKDKQELQEKFAEKSRQKRKLDEMYDQLRNDHESLKR
Sbjct: 121 QVHTAYQKMAKRCQMMEREMENLTKDKQELQEKFAEKSRQKRKLDEMYDQLRNDHESLKR 180

Query: 181 SAIQPVSNFYPRNEPDLFSNPVNMMDSREPMRKDWLVSAPETPGPREEIWPARQNSGNSG 240
           SAIQPVSNFYPRNEPDLFSNPVNMMDSREPMRKDWLVSAPETPGPREEIWPARQNSGNSG
Sbjct: 181 SAIQPVSNFYPRNEPDLFSNPVNMMDSREPMRKDWLVSAPETPGPREEIWPARQNSGNSG 240

Query: 241 GHFDISVGSPPKQAPPMAMEAGNRRAGAHTAFGTGAANPSMTLRNLILSPIKRPQLSRRP 296
           GHFDISVGSPPKQAPPMAMEAGNRRAGAHTAFGTGAANPSMTLRNLILSPIKRPQLSRRP
Sbjct: 241 GHFDISVGSPPKQAPPMAMEAGNRRAGAHTAFGTGAANPSMTLRNLILSPIKRPQLSRRP 300

[Close]

BLAST of MS002793.1 vs. NCBI nr
Match: XP_022142840.1 (E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X3 [Momordica charantia])

HSP 1 Score: 553.9 bits (1426), Expect = 8.3e-154
Identity = 283/304 (93.09%), Postives = 285/304 (93.75%), Query Frame = 0


Query: 1   MKCNACWRELEGRAISTTCGHLLCQEDASKILGNDGACPICDQVLSKSLMKPVDINPNDE 60
           MKCNACWRELEGRAISTTCGHLLCQEDASKILGNDGACPICDQVLSKSLMKPVDINPNDE
Sbjct: 1   MKCNACWRELEGRAISTTCGHLLCQEDASKILGNDGACPICDQVLSKSLMKPVDINPNDE 60

Query: 61  WVN---------VIMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE 120
           WVN         ++MKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE
Sbjct: 61  WVNMAMAGISPQILMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE 120

Query: 121 QVHTAYQKMAKRCQMMEREMENLTKDKQELQEKFAEKSRQKRKLDEMYDQLRNDHESLKR 180
           QVHTAYQKMAKRCQMMEREMENLTKDKQELQEKFAEKSRQKRKLDEMYDQLRNDHESLKR
Sbjct: 121 QVHTAYQKMAKRCQMMEREMENLTKDKQELQEKFAEKSRQKRKLDEMYDQLRNDHESLKR 180

Query: 181 SAIQPVSNFYPRNEPDLFSNPVNMMDSREPMRKDWLVSAPETPGPREEIWPARQNSGNSG 240
           SAIQPVSNFYPRNEPDLFSNPVNMMDSREPMRK          GPREEIWPARQNSGNSG
Sbjct: 181 SAIQPVSNFYPRNEPDLFSNPVNMMDSREPMRK----------GPREEIWPARQNSGNSG 240

Query: 241 GHFDISVGSPPKQAPPMAMEAGNRRAGAHTAFGTGAANPSMTLRNLILSPIKRPQLSRRP 296
           GHFDISVGSPPKQAPPMAMEAGNRRAGAHTAFGTGAANPSMTLRNLILSPIKRPQLSRRP
Sbjct: 241 GHFDISVGSPPKQAPPMAMEAGNRRAGAHTAFGTGAANPSMTLRNLILSPIKRPQLSRRP 294

[Close]

BLAST of MS002793.1 vs. NCBI nr
Match: XP_022142841.1 (E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X4 [Momordica charantia])

HSP 1 Score: 553.9 bits (1426), Expect = 8.3e-154
Identity = 283/304 (93.09%), Postives = 285/304 (93.75%), Query Frame = 0


Query: 1   MKCNACWRELEGRAISTTCGHLLCQEDASKILGNDGACPICDQVLSKSLMKPVDINPNDE 60
           MKCNACWRELEGRAISTTCGHLLCQEDASKILGNDGACPICDQVLSKSLMKPVDINPNDE
Sbjct: 1   MKCNACWRELEGRAISTTCGHLLCQEDASKILGNDGACPICDQVLSKSLMKPVDINPNDE 60

Query: 61  WVN---------VIMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE 120
           WVN         ++MKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE
Sbjct: 61  WVNMAMAGISPQILMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE 120

Query: 121 QVHTAYQKMAKRCQMMEREMENLTKDKQELQEKFAEKSRQKRKLDEMYDQLRNDHESLKR 180
           QVHTAYQKMAKRCQMMEREMENLTKDKQELQEKFAEKSRQKRKLDEMYDQLRNDHESLKR
Sbjct: 121 QVHTAYQKMAKRCQMMEREMENLTKDKQELQEKFAEKSRQKRKLDEMYDQLRNDHESLKR 180

Query: 181 SAIQPVSNFYPRNEPDLFSNPVNMMDSREPMRKDWLVSAPETPGPREEIWPARQNSGNSG 240
           SAIQPVSNFYPRNEPDLFSNPVNMMDSREPMRK          GPREEIWPARQNSGNSG
Sbjct: 181 SAIQPVSNFYPRNEPDLFSNPVNMMDSREPMRK----------GPREEIWPARQNSGNSG 240

Query: 241 GHFDISVGSPPKQAPPMAMEAGNRRAGAHTAFGTGAANPSMTLRNLILSPIKRPQLSRRP 296
           GHFDISVGSPPKQAPPMAMEAGNRRAGAHTAFGTGAANPSMTLRNLILSPIKRPQLSRRP
Sbjct: 241 GHFDISVGSPPKQAPPMAMEAGNRRAGAHTAFGTGAANPSMTLRNLILSPIKRPQLSRRP 294

[Close]

BLAST of MS002793.1 vs. NCBI nr
Match: XP_022942640.1 (E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X2 [Cucurbita moschata] >XP_022982084.1 E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X2 [Cucurbita maxima])

HSP 1 Score: 545.4 bits (1404), Expect = 3.0e-151
Identity = 276/304 (90.79%), Postives = 285/304 (93.75%), Query Frame = 0


Query: 1   MKCNACWRELEGRAISTTCGHLLCQEDASKILGNDGACPICDQVLSKSLMKPVDINPNDE 60
           MKCNACWRELEGRAISTTCGHLLC EDASKIL NDGACPICDQVLSKSLMKPVDINPNDE
Sbjct: 1   MKCNACWRELEGRAISTTCGHLLCTEDASKILSNDGACPICDQVLSKSLMKPVDINPNDE 60

Query: 61  WVN---------VIMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE 120
           WVN         ++MKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE
Sbjct: 61  WVNMAMAGINPQILMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE 120

Query: 121 QVHTAYQKMAKRCQMMEREMENLTKDKQELQEKFAEKSRQKRKLDEMYDQLRNDHESLKR 180
           QVHTAYQKMAKRCQMMEREMEN++KDKQELQEKFAEKSRQKRKLDEMYDQLRN+HESLKR
Sbjct: 121 QVHTAYQKMAKRCQMMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKR 180

Query: 181 SAIQPVSNFYPRNEPDLFSNPVNMMDSREPMRKDWLVSAPETPGPREEIWPARQNSGNSG 240
           SAIQPVSNFYPRNEPDLFSNPV++MD+REPMRKD LVSAPETPGPREEIWP RQNSGNS 
Sbjct: 181 SAIQPVSNFYPRNEPDLFSNPVSLMDNREPMRKDLLVSAPETPGPREEIWPTRQNSGNS- 240

Query: 241 GHFDISVGSPPKQAPPMAMEAGNRRAGAHTAFGTGAANPSMTLRNLILSPIKRPQLSRRP 296
           GHFDISVGSP KQA PMAMEAGNRR GAH AFG+GA NPSMTLRNLILSPIKRPQLSRRP
Sbjct: 241 GHFDISVGSPAKQAAPMAMEAGNRRGGAHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRP 300

[Close]

BLAST of MS002793.1 vs. ExPASy Swiss-Prot
Match: F4HRI2 (E3 ubiquitin-protein ligase CCNB1IP1 homolog OS=Arabidopsis thaliana OX=3702 GN=HEI10 PE=2 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 1.4e-119
Identity = 228/309 (73.79%), Postives = 259/309 (83.82%), Query Frame = 0


Query: 1   MKCNACWRELEGRAISTTCGHLLCQEDASKILGNDGACPICDQVLSKSLMKPVDINPNDE 60
           M+CNACWR+LEGRAISTTCGHLLC EDASKIL NDGACPICDQVLSKSLMKPVDINPN+E
Sbjct: 1   MRCNACWRDLEGRAISTTCGHLLCTEDASKILSNDGACPICDQVLSKSLMKPVDINPNEE 60

Query: 61  WVN---------VIMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE 120
           W+N         ++MKSAYRSVMFYI Q++LEMQYKMNR+VAQCRQKCE MQ KF+EK+E
Sbjct: 61  WINMAMAGISPQILMKSAYRSVMFYIAQRDLEMQYKMNRVVAQCRQKCEGMQAKFSEKME 120

Query: 121 QVHTAYQKMAKRCQMMEREMENLTKDKQELQEKFAEKSRQKRKLDEMYDQLRNDHESLKR 180
           QVHTAYQKM KRCQMME+E+ENLTKDKQELQEKF+EKSRQKRKLDEMYDQLR+++ES+KR
Sbjct: 121 QVHTAYQKMGKRCQMMEQEVENLTKDKQELQEKFSEKSRQKRKLDEMYDQLRSEYESVKR 180

Query: 181 SAIQPVSNFYPRN-EPDLFSNP-VNMMDSREPMRKDWLVSAPETPGPREEIWPARQNSGN 240
           +AIQP +NFYPR+ EPD FSNP VNMM++RE +RKD    +P TPGP++EIWPARQNS N
Sbjct: 181 TAIQPANNFYPRHQEPDFFSNPAVNMMENRETIRKDRSFFSPATPGPKDEIWPARQNSSN 240

Query: 241 SGGHFDISVGSPPKQAPPMAMEAGNRRAG-AHTAF-GTGAANPSMTLRNLILSPIKRPQL 296
           S G FDIS  S     P +  + GNRRAG  H  + G G ANP  TLRNLILSPIKR QL
Sbjct: 241 S-GPFDISTDS-----PAIPSDLGNRRAGRGHPVYGGGGTANPQSTLRNLILSPIKRSQL 300

[Close]

BLAST of MS002793.1 vs. ExPASy Swiss-Prot
Match: I6PL68 (E3 ubiquitin-protein ligase CCNB1IP1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=HEI10 PE=1 SV=2)

HSP 1 Score: 396.4 bits (1017), Expect = 2.9e-109
Identity = 210/308 (68.18%), Postives = 243/308 (78.90%), Query Frame = 0


Query: 1   MKCNACWRELEGRAISTTCGHLLCQEDASKILGNDGACPICDQVLSKSLMKPVDINPNDE 60
           MKCNACWRELEG+A+STTCGHLLC EDA KIL ND ACPICDQVLSKS M+PVD NPND+
Sbjct: 1   MKCNACWRELEGQAVSTTCGHLLCTEDAKKILSNDAACPICDQVLSKSHMRPVDTNPNDD 60

Query: 61  WVN---------VIMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE 120
           W N         ++MKSAYRSVMFYIGQKELEMQYKMNRIV QCRQKCE+MQ KFTEKLE
Sbjct: 61  WTNMSMAGVSPQILMKSAYRSVMFYIGQKELEMQYKMNRIVGQCRQKCELMQAKFTEKLE 120

Query: 121 QVHTAYQKMAKRCQMMEREMENLTKDKQELQEKFAEKSRQKRKLDEMYDQLRNDHESLKR 180
           +VHTAYQKMAK+CQ+ME+E+ENL++DKQELQEKFAEKSRQKRKLDEMYDQLR+++ES KR
Sbjct: 121 EVHTAYQKMAKKCQLMEQEVENLSRDKQELQEKFAEKSRQKRKLDEMYDQLRSEYESAKR 180

Query: 181 SAIQPVSNFYPRNEPDLFSNPVNMMDSREPMRKDWLVSAPETPGPREEIW--PARQNSGN 240
           SAIQP +N++PR +PDLFS   N+MDS +P+R+  L   PETPG R+E W  P RQ    
Sbjct: 181 SAIQPANNYFPRAQPDLFSGVPNIMDSSDPLRQG-LAGLPETPGRRDEGWAPPPRQRRST 240

Query: 241 SGGHFDISVGSPP-KQAPPMAMEAGNRRAGAHTAFGTGAANPSMTLRNLILSPIKRPQLS 296
           S G F++S GSP    APP+ +     R  A   FGT   N S  LRN+I+SP+KRPQLS
Sbjct: 241 S-GPFELSAGSPAHNAAPPVDIRP---RQPARPVFGTAMNNTSAALRNMIISPVKRPQLS 300

[Close]

BLAST of MS002793.1 vs. ExPASy Swiss-Prot
Match: Q9NPC3 (E3 ubiquitin-protein ligase CCNB1IP1 OS=Homo sapiens OX=9606 GN=CCNB1IP1 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.3e-05
Identity = 43/177 (24.29%), Postives = 83/177 (46.89%), Query Frame = 0


Query: 3   CN--ACWRELEGRAISTTCGHLLCQEDASKILGNDGA-CPICDQVLSKSL-MKPVDINPN 62
           CN   C  +L G A  T C H+ C +  S       A CP C+  LS  L +   +++P+
Sbjct: 10  CNYRKCRIKLSGYAWVTACSHIFCDQHGSGEFSRSPAICPACNSTLSGKLDIVRTELSPS 69

Query: 63  DEW---------VNVIMKSAYRSVMFY---IGQKELEMQYKMNRIVAQCRQKCEVMQEKF 122
           +E+           +++  + R++ F+   + Q+ L  +Y  ++     +Q    M++ +
Sbjct: 70  EEYKAMVLAGLRPEIVLDISSRALAFWTYQVHQERLYQEYNFSKAEGHLKQ----MEKIY 129

Query: 123 TEKLEQVHTAYQKMAKRCQMMEREMENLTKDKQELQEKFAEKSRQKRKLDEMYDQLR 164
           T++++        M      M++ +E   K   ++ EK  E++RQ +KL  +YD LR
Sbjct: 130 TQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFSDISEKLMERNRQYQKLQGLYDSLR 182

[Close]

BLAST of MS002793.1 vs. ExPASy Swiss-Prot
Match: D3Z3K2 (E3 ubiquitin-protein ligase CCNB1IP1 OS=Mus musculus OX=10090 GN=Ccnb1ip1 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 6.7e-05
Identity = 43/177 (24.29%), Postives = 83/177 (46.89%), Query Frame = 0


Query: 3   CN--ACWRELEGRAISTTCGHLLCQEDASKILGNDGA-CPICDQVLSKSL-MKPVDINPN 62
           CN   C  +L G A  T C H+ C +  S       A CP C+  LS  L +   +++P+
Sbjct: 10  CNYRKCRIKLSGYAWVTACSHIFCDQHGSGEFSRSPAICPACNSTLSGKLDIVRTELSPS 69

Query: 63  DEW---------VNVIMKSAYRSVMFY---IGQKELEMQYKMNRIVAQCRQKCEVMQEKF 122
           +E+           V++  + R++ F+   + Q+ L  +Y  ++     +Q    M++ +
Sbjct: 70  EEYKAMVLAGLRPEVVLDISSRALAFWTYQVHQERLYQEYNFSKAENHLKQ----MEKMY 129

Query: 123 TEKLEQVHTAYQKMAKRCQMMEREMENLTKDKQELQEKFAEKSRQKRKLDEMYDQLR 164
            ++++  +     M      M++ +E   K   ++ EK  E++RQ +KL  +YD LR
Sbjct: 130 MQQIQSKNIELTSMKGEVISMKKVLEEYKKKFSDISEKLMERNRQYQKLQGLYDSLR 182

[Close]

BLAST of MS002793.1 vs. ExPASy TrEMBL
Match: A0A6J1CND8 (E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012855 PE=4 SV=1)

HSP 1 Score: 584.3 bits (1505), Expect = 2.8e-163
Identity = 293/304 (96.38%), Postives = 295/304 (97.04%), Query Frame = 0


Query: 1   MKCNACWRELEGRAISTTCGHLLCQEDASKILGNDGACPICDQVLSKSLMKPVDINPNDE 60
           MKCNACWRELEGRAISTTCGHLLCQEDASKILGNDGACPICDQVLSKSLMKPVDINPNDE
Sbjct: 1   MKCNACWRELEGRAISTTCGHLLCQEDASKILGNDGACPICDQVLSKSLMKPVDINPNDE 60

Query: 61  WVN---------VIMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE 120
           WVN         ++MKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE
Sbjct: 61  WVNMAMAGISPQILMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE 120

Query: 121 QVHTAYQKMAKRCQMMEREMENLTKDKQELQEKFAEKSRQKRKLDEMYDQLRNDHESLKR 180
           QVHTAYQKMAKRCQMMEREMENLTKDKQELQEKFAEKSRQKRKLDEMYDQLRNDHESLKR
Sbjct: 121 QVHTAYQKMAKRCQMMEREMENLTKDKQELQEKFAEKSRQKRKLDEMYDQLRNDHESLKR 180

Query: 181 SAIQPVSNFYPRNEPDLFSNPVNMMDSREPMRKDWLVSAPETPGPREEIWPARQNSGNSG 240
           SAIQPVSNFYPRNEPDLFSNPVNMMDSREPMRKDWLVSAPETPGPREEIWPARQNSGNSG
Sbjct: 181 SAIQPVSNFYPRNEPDLFSNPVNMMDSREPMRKDWLVSAPETPGPREEIWPARQNSGNSG 240

Query: 241 GHFDISVGSPPKQAPPMAMEAGNRRAGAHTAFGTGAANPSMTLRNLILSPIKRPQLSRRP 296
           GHFDISVGSPPKQAPPMAMEAGNRRAGAHTAFGTGAANPSMTLRNLILSPIKRPQLSRRP
Sbjct: 241 GHFDISVGSPPKQAPPMAMEAGNRRAGAHTAFGTGAANPSMTLRNLILSPIKRPQLSRRP 300

[Close]

BLAST of MS002793.1 vs. ExPASy TrEMBL
Match: A0A6J1CMM6 (E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X2 OS=Momordica charantia OX=3673 GN=LOC111012855 PE=4 SV=1)

HSP 1 Score: 584.3 bits (1505), Expect = 2.8e-163
Identity = 293/304 (96.38%), Postives = 295/304 (97.04%), Query Frame = 0


Query: 1   MKCNACWRELEGRAISTTCGHLLCQEDASKILGNDGACPICDQVLSKSLMKPVDINPNDE 60
           MKCNACWRELEGRAISTTCGHLLCQEDASKILGNDGACPICDQVLSKSLMKPVDINPNDE
Sbjct: 1   MKCNACWRELEGRAISTTCGHLLCQEDASKILGNDGACPICDQVLSKSLMKPVDINPNDE 60

Query: 61  WVN---------VIMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE 120
           WVN         ++MKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE
Sbjct: 61  WVNMAMAGISPQILMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE 120

Query: 121 QVHTAYQKMAKRCQMMEREMENLTKDKQELQEKFAEKSRQKRKLDEMYDQLRNDHESLKR 180
           QVHTAYQKMAKRCQMMEREMENLTKDKQELQEKFAEKSRQKRKLDEMYDQLRNDHESLKR
Sbjct: 121 QVHTAYQKMAKRCQMMEREMENLTKDKQELQEKFAEKSRQKRKLDEMYDQLRNDHESLKR 180

Query: 181 SAIQPVSNFYPRNEPDLFSNPVNMMDSREPMRKDWLVSAPETPGPREEIWPARQNSGNSG 240
           SAIQPVSNFYPRNEPDLFSNPVNMMDSREPMRKDWLVSAPETPGPREEIWPARQNSGNSG
Sbjct: 181 SAIQPVSNFYPRNEPDLFSNPVNMMDSREPMRKDWLVSAPETPGPREEIWPARQNSGNSG 240

Query: 241 GHFDISVGSPPKQAPPMAMEAGNRRAGAHTAFGTGAANPSMTLRNLILSPIKRPQLSRRP 296
           GHFDISVGSPPKQAPPMAMEAGNRRAGAHTAFGTGAANPSMTLRNLILSPIKRPQLSRRP
Sbjct: 241 GHFDISVGSPPKQAPPMAMEAGNRRAGAHTAFGTGAANPSMTLRNLILSPIKRPQLSRRP 300

[Close]

BLAST of MS002793.1 vs. ExPASy TrEMBL
Match: A0A6J1CNE3 (E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X4 OS=Momordica charantia OX=3673 GN=LOC111012855 PE=4 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 4.0e-154
Identity = 283/304 (93.09%), Postives = 285/304 (93.75%), Query Frame = 0


Query: 1   MKCNACWRELEGRAISTTCGHLLCQEDASKILGNDGACPICDQVLSKSLMKPVDINPNDE 60
           MKCNACWRELEGRAISTTCGHLLCQEDASKILGNDGACPICDQVLSKSLMKPVDINPNDE
Sbjct: 1   MKCNACWRELEGRAISTTCGHLLCQEDASKILGNDGACPICDQVLSKSLMKPVDINPNDE 60

Query: 61  WVN---------VIMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE 120
           WVN         ++MKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE
Sbjct: 61  WVNMAMAGISPQILMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE 120

Query: 121 QVHTAYQKMAKRCQMMEREMENLTKDKQELQEKFAEKSRQKRKLDEMYDQLRNDHESLKR 180
           QVHTAYQKMAKRCQMMEREMENLTKDKQELQEKFAEKSRQKRKLDEMYDQLRNDHESLKR
Sbjct: 121 QVHTAYQKMAKRCQMMEREMENLTKDKQELQEKFAEKSRQKRKLDEMYDQLRNDHESLKR 180

Query: 181 SAIQPVSNFYPRNEPDLFSNPVNMMDSREPMRKDWLVSAPETPGPREEIWPARQNSGNSG 240
           SAIQPVSNFYPRNEPDLFSNPVNMMDSREPMRK          GPREEIWPARQNSGNSG
Sbjct: 181 SAIQPVSNFYPRNEPDLFSNPVNMMDSREPMRK----------GPREEIWPARQNSGNSG 240

Query: 241 GHFDISVGSPPKQAPPMAMEAGNRRAGAHTAFGTGAANPSMTLRNLILSPIKRPQLSRRP 296
           GHFDISVGSPPKQAPPMAMEAGNRRAGAHTAFGTGAANPSMTLRNLILSPIKRPQLSRRP
Sbjct: 241 GHFDISVGSPPKQAPPMAMEAGNRRAGAHTAFGTGAANPSMTLRNLILSPIKRPQLSRRP 294

[Close]

BLAST of MS002793.1 vs. ExPASy TrEMBL
Match: A0A6J1CM14 (E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X3 OS=Momordica charantia OX=3673 GN=LOC111012855 PE=4 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 4.0e-154
Identity = 283/304 (93.09%), Postives = 285/304 (93.75%), Query Frame = 0


Query: 1   MKCNACWRELEGRAISTTCGHLLCQEDASKILGNDGACPICDQVLSKSLMKPVDINPNDE 60
           MKCNACWRELEGRAISTTCGHLLCQEDASKILGNDGACPICDQVLSKSLMKPVDINPNDE
Sbjct: 1   MKCNACWRELEGRAISTTCGHLLCQEDASKILGNDGACPICDQVLSKSLMKPVDINPNDE 60

Query: 61  WVN---------VIMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE 120
           WVN         ++MKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE
Sbjct: 61  WVNMAMAGISPQILMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE 120

Query: 121 QVHTAYQKMAKRCQMMEREMENLTKDKQELQEKFAEKSRQKRKLDEMYDQLRNDHESLKR 180
           QVHTAYQKMAKRCQMMEREMENLTKDKQELQEKFAEKSRQKRKLDEMYDQLRNDHESLKR
Sbjct: 121 QVHTAYQKMAKRCQMMEREMENLTKDKQELQEKFAEKSRQKRKLDEMYDQLRNDHESLKR 180

Query: 181 SAIQPVSNFYPRNEPDLFSNPVNMMDSREPMRKDWLVSAPETPGPREEIWPARQNSGNSG 240
           SAIQPVSNFYPRNEPDLFSNPVNMMDSREPMRK          GPREEIWPARQNSGNSG
Sbjct: 181 SAIQPVSNFYPRNEPDLFSNPVNMMDSREPMRK----------GPREEIWPARQNSGNSG 240

Query: 241 GHFDISVGSPPKQAPPMAMEAGNRRAGAHTAFGTGAANPSMTLRNLILSPIKRPQLSRRP 296
           GHFDISVGSPPKQAPPMAMEAGNRRAGAHTAFGTGAANPSMTLRNLILSPIKRPQLSRRP
Sbjct: 241 GHFDISVGSPPKQAPPMAMEAGNRRAGAHTAFGTGAANPSMTLRNLILSPIKRPQLSRRP 294

[Close]

BLAST of MS002793.1 vs. ExPASy TrEMBL
Match: A0A6J1J1K9 (E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481027 PE=4 SV=1)

HSP 1 Score: 545.4 bits (1404), Expect = 1.4e-151
Identity = 276/304 (90.79%), Postives = 285/304 (93.75%), Query Frame = 0


Query: 1   MKCNACWRELEGRAISTTCGHLLCQEDASKILGNDGACPICDQVLSKSLMKPVDINPNDE 60
           MKCNACWRELEGRAISTTCGHLLC EDASKIL NDGACPICDQVLSKSLMKPVDINPNDE
Sbjct: 1   MKCNACWRELEGRAISTTCGHLLCTEDASKILSNDGACPICDQVLSKSLMKPVDINPNDE 60

Query: 61  WVN---------VIMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE 120
           WVN         ++MKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE
Sbjct: 61  WVNMAMAGINPQILMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE 120

Query: 121 QVHTAYQKMAKRCQMMEREMENLTKDKQELQEKFAEKSRQKRKLDEMYDQLRNDHESLKR 180
           QVHTAYQKMAKRCQMMEREMEN++KDKQELQEKFAEKSRQKRKLDEMYDQLRN+HESLKR
Sbjct: 121 QVHTAYQKMAKRCQMMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKR 180

Query: 181 SAIQPVSNFYPRNEPDLFSNPVNMMDSREPMRKDWLVSAPETPGPREEIWPARQNSGNSG 240
           SAIQPVSNFYPRNEPDLFSNPV++MD+REPMRKD LVSAPETPGPREEIWP RQNSGNS 
Sbjct: 181 SAIQPVSNFYPRNEPDLFSNPVSLMDNREPMRKDLLVSAPETPGPREEIWPTRQNSGNS- 240

Query: 241 GHFDISVGSPPKQAPPMAMEAGNRRAGAHTAFGTGAANPSMTLRNLILSPIKRPQLSRRP 296
           GHFDISVGSP KQA PMAMEAGNRR GAH AFG+GA NPSMTLRNLILSPIKRPQLSRRP
Sbjct: 241 GHFDISVGSPAKQAAPMAMEAGNRRGGAHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRP 300

[Close]

BLAST of MS002793.1 vs. TAIR 10
Match: AT1G53490.1 (RING/U-box superfamily protein )

HSP 1 Score: 430.6 bits (1106), Expect = 9.9e-121
Identity = 228/309 (73.79%), Postives = 259/309 (83.82%), Query Frame = 0


Query: 1   MKCNACWRELEGRAISTTCGHLLCQEDASKILGNDGACPICDQVLSKSLMKPVDINPNDE 60
           M+CNACWR+LEGRAISTTCGHLLC EDASKIL NDGACPICDQVLSKSLMKPVDINPN+E
Sbjct: 1   MRCNACWRDLEGRAISTTCGHLLCTEDASKILSNDGACPICDQVLSKSLMKPVDINPNEE 60

Query: 61  WVN---------VIMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLE 120
           W+N         ++MKSAYRSVMFYI Q++LEMQYKMNR+VAQCRQKCE MQ KF+EK+E
Sbjct: 61  WINMAMAGISPQILMKSAYRSVMFYIAQRDLEMQYKMNRVVAQCRQKCEGMQAKFSEKME 120

Query: 121 QVHTAYQKMAKRCQMMEREMENLTKDKQELQEKFAEKSRQKRKLDEMYDQLRNDHESLKR 180
           QVHTAYQKM KRCQMME+E+ENLTKDKQELQEKF+EKSRQKRKLDEMYDQLR+++ES+KR
Sbjct: 121 QVHTAYQKMGKRCQMMEQEVENLTKDKQELQEKFSEKSRQKRKLDEMYDQLRSEYESVKR 180

Query: 181 SAIQPVSNFYPRN-EPDLFSNP-VNMMDSREPMRKDWLVSAPETPGPREEIWPARQNSGN 240
           +AIQP +NFYPR+ EPD FSNP VNMM++RE +RKD    +P TPGP++EIWPARQNS N
Sbjct: 181 TAIQPANNFYPRHQEPDFFSNPAVNMMENRETIRKDRSFFSPATPGPKDEIWPARQNSSN 240

Query: 241 SGGHFDISVGSPPKQAPPMAMEAGNRRAG-AHTAF-GTGAANPSMTLRNLILSPIKRPQL 296
           S G FDIS  S     P +  + GNRRAG  H  + G G ANP  TLRNLILSPIKR QL
Sbjct: 241 S-GPFDISTDS-----PAIPSDLGNRRAGRGHPVYGGGGTANPQSTLRNLILSPIKRSQL 300

The following BLAST results are available for this feature:

BLAST of MS002793.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142839.1	5.7e-163	96.38	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X2 [Momordica charantia]	[more]
XP_022142833.1	5.7e-163	96.38	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 [Momordica charantia] >X...	[more]
XP_022142840.1	8.3e-154	93.09	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X3 [Momordica charantia]	[more]
XP_022142841.1	8.3e-154	93.09	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X4 [Momordica charantia]	[more]
XP_022942640.1	3.0e-151	90.79	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X2 [Cucurbita moschata] >XP...	[more]

BLAST of MS002793.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4HRI2	1.4e-119	73.79	E3 ubiquitin-protein ligase CCNB1IP1 homolog OS=Arabidopsis thaliana OX=3702 GN=...	[more]
I6PL68	2.9e-109	68.18	E3 ubiquitin-protein ligase CCNB1IP1 homolog OS=Oryza sativa subsp. japonica OX=...	[more]
Q9NPC3	1.3e-05	24.29	E3 ubiquitin-protein ligase CCNB1IP1 OS=Homo sapiens OX=9606 GN=CCNB1IP1 PE=1 SV...	[more]
D3Z3K2	6.7e-05	24.29	E3 ubiquitin-protein ligase CCNB1IP1 OS=Mus musculus OX=10090 GN=Ccnb1ip1 PE=1 S...	[more]

BLAST of MS002793.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CND8	2.8e-163	96.38	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 OS=Momordica charantia O...	[more]
A0A6J1CMM6	2.8e-163	96.38	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X2 OS=Momordica charantia O...	[more]
A0A6J1CNE3	4.0e-154	93.09	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X4 OS=Momordica charantia O...	[more]
A0A6J1CM14	4.0e-154	93.09	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X3 OS=Momordica charantia O...	[more]
A0A6J1J1K9	1.4e-151	90.79	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 OS=Cucurbita maxima OX=3...	[more]

BLAST of MS002793.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53490.1	9.9e-121	73.79	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 117..172
None	No IPR available	PANTHER	PTHR47384	E3 UBIQUITIN-PROTEIN LIGASE CCNB1IP1 HOMOLOG	coord: 1..295
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 2..50
IPR001841	Zinc finger, RING-type	PFAM	PF14634	zf-RING_5	coord: 2..43 e-value: 9.5E-9 score: 35.1
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 1..53 e-value: 3.1E-7 score: 31.7

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS002793	MS002793	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS002793.1-cds	MS002793.1-cds-scaffold66:631938..632007	CDS
MS002793.1-cds	MS002793.1-cds-scaffold66:632128..632200	CDS
MS002793.1-cds	MS002793.1-cds-scaffold66:632495..632544	CDS
MS002793.1-cds	MS002793.1-cds-scaffold66:632808..633063	CDS
MS002793.1-cds	MS002793.1-cds-scaffold66:633154..633317	CDS
MS002793.1-cds	MS002793.1-cds-scaffold66:633899..634170	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS002793.1	MS002793.1-protein	polypeptide